Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0006576

Physical Location & Seq

Genomic Coordinates Reverse (-)

36759409 .. 36764639

Gene Structure 5231 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1289400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGAAGGCCACCGAAAAGTTTAGTGGCGTGAAGCAATTGCACGAAGAAGCCGCTCTTTGTGGAGTTTCGGCAACTGCGTCGAAAACGCTGGAGAGGCTTTCTGAACATTCTGATGGCATTCCTCTAGGTAAAGCTAATGAGGAAGGAAATGGCGGCAAGGAGAAGATAATAACCGCAACCAAAAAGGGTGCGGCGGTACTGGATCAGTGGCTACCGGATGACATAAAGGCAGATTATCATGTTTTGCAACTGGGGGATGATATATACGATGCCATGTTAAACCAGACCAATGTCAGTCGTAACAATAACACATTCTATGTGATTCAAGTTCTTGAATCTGATGTTGGTGGAAGTTTCATGATTTACTATAGATGGGGGAGAGTAGGTTTTAAGGGTCAGAACAAGCTAGCTCCTCACGCATCCCGCGAGAGCGCGATCAAGGAGTTTAAACAGAAATTCCGTGACAAAACCGGGAATGATTGGTCCAATCGAAAAATGTTCCAGCTTATCCCATCCTGCTATATGTGGATAGAAATGGATTACAATGAAAAGGAAGAGCAGTCAGCTGTCGAAGAAAAGAATGGCTCTGCTTTAGGACGTCAACCTTTGGAAACACAACTTGAGCCCTGCATTGCAAATTTTATATCTCTTATTTTCAACGTCGACATGATGAAGCAGCATGTGATGGAAATAGTATACAACGCTGATAAGTTGCCTCTGGGTAAGCTTAGCAAATCAACAATTCTAAAGGGCTATAACATCCTGCGGAGGATTTCTGATGTGATTGGCTCATCTAACAGGGAATTAATCGAACAATTAAGCGGAGAGTTCTACACTGTCATTCCTCATGACATCAGGTTTAAAAAAATGCGTAAATTTGTGATTGATACTCCTCAGAAGTTGAAACACAAGCTAGAAATGGTTGAAGCACTAGGTGAAATTGAGGTTACAACGAAATTGTTGAAGGATGACACAGGAATGCAGGGAGATCCCTTGTATTCCTGTTATCGAAGCCTTCATTGTGAGCTGACACCAGTTGGTGCTGATTCTCATGAATTTGATATGATTAAAAAATATATGCGTAATACTCATGCAAAAAGACATTCAACTTACACTGTTGATATCGTTCAAATATTCCGCACATCTAAAGAGGGTGAAGTTGAACGCTTCAGGAAGTTTTCTGGTACAAAAAATAGAATGCTTTTGTGGCATGGTTCTCGTCTTACAAACTGGGTTGGTATATTATCTCAAGGCTTGCGCATAGCTCCACCTGAAGCCCCAGAGACTGGTCACATGTTCGGGAAAGGAGTTTACTTTGCAGACATGTTCTCCAAAAGCGCAAAGTATTGCCATGCATCTAATGGCTGTACATCTGGGGTGCTGCTTCTATGTGAGGTTGCGCTGGGCGACATGGCTGAGCTTTTAACCGCTAACTACGATGCGGACAAGTTACCCGTAGGAAAACTAAGCACTAAAGGAGTTGGGGGAACTGAACCAGATTTTTCAGAAGCTCAGTTACTAGATGACGGTGTCGTGGTTCCCCTGGGAAAGCAGAAAGAGAATACAAGCCACGAGGGTTCATTACGGCACAATGAGTACATAGTTTACAATGTGGAACAGATCAGGAAGCGCTTCGTTGTTCAAGTTAAGTTCAATTTCAAGAATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000726 GO:0003674 GO:0003824 GO:0003909 GO:0003910 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006266 GO:0006271 GO:0006273 GO:0006281 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016070 GO:0016874 GO:0016886 GO:0022616 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051103 GO:0051716 GO:0071704 GO:0090304 GO:0140097 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03410 ko04210 ko04212 ko04214 ko04217 map03410 map04210 map04212 map04214 map04217

Pfam Domains

Protein Families

PARP PARP_reg SAP WGR

Protein Analysis

557

Amino Acids

62.82

Weight (kDa)

7.61

Isoelectric Point (pI)

31.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WGR	PF05406	89 - 167	5.2e-25	WGR domain
PARP_reg	PF02877	206 - 336	2.9e-37	Poly(ADP-ribose) polymerase, regulatory domain
PARP	PF00644	350 - 551	5.7e-76	Poly(ADP-ribose) polymerase catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02390 AT4G02390 AT4G02390
fragaria_vesca	FvH4_2g25840 FvH4_2g25840 FvH4_2g25840
malus_domestica	MD03G1289400.v1.1 MD03G1289500.v1.1 MD03G1289600.v1.1
prunus_persica	Prupe.8G262600_v2.0.a1 Prupe.8G262600_v2.0.a1 Prupe.8G262600_v2.0.a1 Prupe.8G262600_v2.0.a1 Prupe.8G262600_v2.0.a1
pyrus_communis	pycom03g22920
rosa_chinensis	RchiOBHm_Chr6g0294171
rosa_laevigata	RLG00000011893
rosa_multiflora	Rmu_sc0001521.1_g000044
rosa_roxburghii	Rroxscaffold_7G00173580
rosa_rugosa	Rorug06G0242000 Rorug06G0242100
rosa_samantha	Rh6AG354300 Rh6BG361200 Rh6CG368500 Rh6DG355300
rosa_wichuraiana	Rw6G030880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	601
Acc16I	TGCGCA	1 cut(s)	1259
AccB7I	CCANNNNNTGG	1 cut(s)	1286
AccBSI	CCGCTC	1 cut(s)	53
AccI	GTMKAC	2 cut(s)	663, 696
AccII	CGCG	2 cut(s)	426, 434
AclWI	GGATC	2 cut(s)	210, 983
AcsI	RAATTY	4 cut(s)	455, 637, 875, 1055
AcuI	CTGAAG	2 cut(s)	1153, 1293
AcyI	GRCGYC	1 cut(s)	598
AdeI	CACNNNGTG	1 cut(s)	935
AfaI	GTAC	4 cut(s)	198, 1186, 1369, 1598
AfeI	AGCGCT	1 cut(s)	1631
AfiI	CCNNNNNNNGG	1 cut(s)	1286
AflIII	ACRYGT	2 cut(s)	1293, 1323
AjnI	CCWGG	1 cut(s)	1542
AjuI	GAANNNNNNNTTGG	2 cut(s)	327, 359
Alw26I	GTCTC	1 cut(s)	1277
AlwI	GGATC	2 cut(s)	210, 983
AlwNI	CAGNNNCTG	1 cut(s)	1286
Aor51HI	AGCGCT	1 cut(s)	1631
AoxI	GGCC	1 cut(s)	6
ApeKI	GCWGC	2 cut(s)	676, 1381
ApoI	RAATTY	4 cut(s)	455, 637, 875, 1055
AseI	ATTAAT	1 cut(s)	806
Asp700I	GAANNNNTTC	1 cut(s)	1631
AspLEI	GCGC	5 cut(s)	434, 1260, 1340, 1402, 1632
AspS9I	GGNCC	1 cut(s)	483
AsuC2I	CCSGG	1 cut(s)	472
AsuHPI	GGTGA	2 cut(s)	947, 1166
AsuNHI	GCTAGC	1 cut(s)	406
AvaII	GGWCC	1 cut(s)	483
BanII	GRGCYC	1 cut(s)	627
BarI	GAAGNNNNNNTAC	2 cut(s)	1500, 1532
BauI	CACGAG	1 cut(s)	1571
BbvI	GCAGC	2 cut(s)	688, 1368
BccI	CCATC	4 cut(s)	107, 366, 520, 679
BceAI	ACGGC	1 cut(s)	1601
BcgI	CGANNNNNNTGC	4 cut(s)	60, 94, 1199, 1233
BciT130I	CCWGG	1 cut(s)	1544
BcnI	CCSGG	1 cut(s)	472
BcoDI	GTCTC	1 cut(s)	1277
BfaI	CTAG	5 cut(s)	125, 407, 914, 932, 1520
BfmI	CTRYAG	1 cut(s)	367
BfoI	RGCGCY	1 cut(s)	1633
BisI	GCNGC	5 cut(s)	51, 154, 192, 677, 1382
BlpI	GCTNAGC	2 cut(s)	728, 1416
BlsI	GCNGC	5 cut(s)	52, 155, 193, 678, 1383
Bme1390I	CCNGG	2 cut(s)	472, 1544
Bme18I	GGWCC	1 cut(s)	483
BmgT120I	GGNCC	1 cut(s)	483
BmiI	GGNNCC	1 cut(s)	1539
BmrFI	CCNGG	2 cut(s)	472, 1544
BmrI	ACTGGG	2 cut(s)	260, 1240
BmsI	GCATC	4 cut(s)	259, 428, 1364, 1429
BmtI	GCTAGC	1 cut(s)	410
BmuI	ACTGGG	2 cut(s)	260, 1240
BoxI	GACNNNNGTC	1 cut(s)	290
BpmI	CTGGAG	1 cut(s)	110
Bpu1102I	GCTNAGC	2 cut(s)	728, 1416
BpuEI	CTTGAG	2 cut(s)	641, 1233
BpuMI	CCSGG	1 cut(s)	472
BsaHI	GRCGYC	1 cut(s)	598
BsaJI	CCNNGG	2 cut(s)	1542, 1543
BsaWI	WCCGGW	1 cut(s)	214
BsaXI	ACNNNNNCTCC	4 cut(s)	370, 400, 1313, 1343
Bsc4I	CCNNNNNNNGG	1 cut(s)	1286
Bse1I	ACTGG	5 cut(s)	204, 255, 1034, 1235, 1291
Bse3DI	GCAATG	1 cut(s)	630
BseBI	CCWGG	1 cut(s)	1544
BseDI	CCNNGG	2 cut(s)	1542, 1543
BseGI	GGATG	6 cut(s)	223, 262, 419, 512, 759, 973
BseLI	CCNNNNNNNGG	1 cut(s)	1286
BseMI	GCAATG	1 cut(s)	630
BseMII	CTCAG	3 cut(s)	908, 1407, 1526
BseNI	ACTGG	5 cut(s)	204, 255, 1034, 1235, 1291
BseRI	GAGGAG	2 cut(s)	402, 882
BseXI	GCAGC	2 cut(s)	688, 1368
BseYI	CCCAGC	1 cut(s)	1402
Bsh1236I	CGCG	2 cut(s)	426, 434
BshFI	GGCC	1 cut(s)	8
BsiSI	CCGG	2 cut(s)	215, 471
BslI	CCNNNNNNNGG	1 cut(s)	1286
BsmAI	GTCTC	1 cut(s)	1277
BsmI	GAATGC	3 cut(s)	117, 984, 1203
BsnI	GGCC	1 cut(s)	8
Bsp1286I	GDGCHC	1 cut(s)	627
Bsp1407I	TGTACA	1 cut(s)	1367
Bsp143I	GATC	4 cut(s)	202, 435, 988, 1620
Bsp1720I	GCTNAGC	2 cut(s)	728, 1416
BspANI	GGCC	1 cut(s)	8
BspCNI	CTCAG	3 cut(s)	907, 1408, 1525
BspFNI	CGCG	2 cut(s)	426, 434
BspHI	TCATGA	3 cut(s)	357, 847, 1051
BspLI	GGNNCC	1 cut(s)	1539
BspOI	GCTAGC	1 cut(s)	410
BspPI	GGATC	2 cut(s)	210, 983
BspQI	GCTCTTC	1 cut(s)	549
BsrBI	CCGCTC	1 cut(s)	53
BsrDI	GCAATG	1 cut(s)	630
BsrGI	TGTACA	1 cut(s)	1367
BsrI	ACTGG	5 cut(s)	204, 255, 1034, 1235, 1291
BssECI	CCNNGG	2 cut(s)	1542, 1543
BssMI	GATC	4 cut(s)	202, 435, 988, 1620
BssNAI	GTATAC	1 cut(s)	697
BssNI	GRCGYC	1 cut(s)	598
BssSI	CACGAG	1 cut(s)	1571
Bst1107I	GTATAC	1 cut(s)	697
Bst2BI	CACGAG	1 cut(s)	1571
Bst2UI	CCWGG	1 cut(s)	1544
Bst4CI	ACNGT	3 cut(s)	838, 1117, 1529
Bst6I	CTCTTC	1 cut(s)	549
BstACI	GRCGYC	1 cut(s)	598
BstAUI	TGTACA	1 cut(s)	1367
BstC8I	GCNNGC	2 cut(s)	408, 1256
BstDEI	CTNAG	5 cut(s)	728, 894, 1416, 1466, 1512
BstF5I	GGATG	6 cut(s)	223, 262, 419, 512, 759, 973
BstFNI	CGCG	2 cut(s)	426, 434
BstH2I	RGCGCY	1 cut(s)	1633
BstHHI	GCGC	5 cut(s)	434, 1260, 1340, 1402, 1632
BstKTI	GATC	4 cut(s)	205, 438, 991, 1623
BstMAI	GTCTC	1 cut(s)	1277
BstMBI	GATC	4 cut(s)	202, 435, 988, 1620
BstMWI	GCNNNNNNNGC	3 cut(s)	94, 416, 1207
BstNI	CCWGG	1 cut(s)	1544
BstNSI	RCATGY	3 cut(s)	683, 1297, 1327
BstPAI	GACNNNNGTC	1 cut(s)	290
BstSCI	CCNGG	2 cut(s)	470, 1542
BstSFI	CTRYAG	1 cut(s)	367
BstUI	CGCG	2 cut(s)	426, 434
BstV1I	GCAGC	2 cut(s)	688, 1368
BstX2I	RGATCY	1 cut(s)	988
BstYI	RGATCY	1 cut(s)	988
BstZ17I	GTATAC	1 cut(s)	697
BsuRI	GGCC	1 cut(s)	8
BtsCI	GGATG	6 cut(s)	223, 262, 419, 512, 759, 973
BtsIMutI	CAGTG	3 cut(s)	212, 834, 1113
Cac8I	GCNNGC	2 cut(s)	408, 1256
CaiI	CAGNNNCTG	1 cut(s)	1286
CciI	TCATGA	3 cut(s)	357, 847, 1051
CfoI	GCGC	5 cut(s)	434, 1260, 1340, 1402, 1632
Cfr13I	GGNCC	1 cut(s)	483
CseI	GACGC	1 cut(s)	66
Csp6I	GTAC	4 cut(s)	197, 1185, 1368, 1597
CviQI	GTAC	4 cut(s)	197, 1185, 1368, 1597
DdeI	CTNAG	5 cut(s)	728, 894, 1416, 1466, 1512
DpnI	GATC	4 cut(s)	204, 437, 990, 1622
DpnII	GATC	4 cut(s)	202, 435, 988, 1620
DraI	TTTAAA	2 cut(s)	448, 862
DraIII	CACNNNGTG	1 cut(s)	935
Eam1104I	CTCTTC	1 cut(s)	549
EarI	CTCTTC	1 cut(s)	549
Eco24I	GRGCYC	1 cut(s)	627
Eco32I	GATATC	1 cut(s)	1123
Eco47I	GGWCC	1 cut(s)	483
Eco47III	AGCGCT	1 cut(s)	1631
Eco57I	CTGAAG	2 cut(s)	1153, 1293
EcoRII	CCWGG	1 cut(s)	1542
EcoRV	GATATC	1 cut(s)	1123
EcoT22I	ATGCAT	1 cut(s)	1357
EcoT38I	GRGCYC	1 cut(s)	627
FalI	AAGNNNNNCTT	2 cut(s)	39, 71
FauI	CCCGC	1 cut(s)	431
FblI	GTMKAC	2 cut(s)	663, 696
Fnu4HI	GCNGC	5 cut(s)	51, 154, 192, 677, 1382
FokI	GGATG	6 cut(s)	230, 269, 406, 499, 746, 980
FriOI	GRGCYC	1 cut(s)	627
Fsp4HI	GCNGC	5 cut(s)	51, 154, 192, 677, 1382
FspBI	CTAG	5 cut(s)	125, 407, 914, 932, 1520
FspI	TGCGCA	1 cut(s)	1259
GlaI	GCGC	5 cut(s)	433, 1259, 1339, 1401, 1631
GluI	GCNGC	5 cut(s)	51, 154, 192, 677, 1382
GsaI	CCCAGC	1 cut(s)	1406
GsuI	CTGGAG	1 cut(s)	110
HaeII	RGCGCY	1 cut(s)	1633
HaeIII	GGCC	1 cut(s)	8
HapII	CCGG	2 cut(s)	215, 471
HgaI	GACGC	1 cut(s)	66
HhaI	GCGC	5 cut(s)	434, 1260, 1340, 1402, 1632
Hin1I	GRCGYC	1 cut(s)	598
Hin6I	GCGC	5 cut(s)	432, 1258, 1338, 1400, 1630
HinP1I	GCGC	5 cut(s)	432, 1258, 1338, 1400, 1630
HincII	GTYRAC	2 cut(s)	602, 664
HindII	GTYRAC	2 cut(s)	602, 664
HindIII	AAGCTT	1 cut(s)	725
HinfI	GANTC	3 cut(s)	322, 335, 1046
HpaII	CCGG	2 cut(s)	215, 471
HphI	GGTGA	2 cut(s)	947, 1166
Hpy166II	GTNNAC	5 cut(s)	602, 664, 697, 1312, 1606
Hpy188I	TCNGA	7 cut(s)	103, 112, 340, 399, 778, 897, 1507
Hpy188III	TCNNGA	8 cut(s)	332, 358, 848, 1052, 1171, 1300, 1624, 1660
Hpy8I	GTNNAC	5 cut(s)	602, 664, 697, 1312, 1606
Hpy99I	CGWCG	2 cut(s)	82, 665
HpyAV	CCTTC	3 cut(s)	137, 958, 1025
HpyCH4III	ACNGT	3 cut(s)	838, 1117, 1529
HpyCH4IV	ACGT	2 cut(s)	598, 660
HpyCH4V	TGCA	8 cut(s)	40, 247, 630, 635, 982, 1094, 1319, 1355
HpyF10VI	GCNNNNNNNGC	3 cut(s)	94, 416, 1207
HpyF3I	CTNAG	5 cut(s)	728, 894, 1416, 1466, 1512
HpySE526I	ACGT	2 cut(s)	598, 660
Hsp92I	GRCGYC	1 cut(s)	598
HspAI	GCGC	5 cut(s)	432, 1258, 1338, 1400, 1630
Kzo9I	GATC	4 cut(s)	202, 435, 988, 1620
LguI	GCTCTTC	1 cut(s)	549
LmnI	GCTCC	2 cut(s)	415, 1270
Lsp1109I	GCAGC	2 cut(s)	688, 1368
LweI	GCATC	4 cut(s)	259, 428, 1364, 1429
MaeI	CTAG	5 cut(s)	125, 407, 914, 932, 1520
MaeII	ACGT	2 cut(s)	598, 660
MaeIII	GTNAC	6 cut(s)	299, 461, 946, 1289, 1449, 1515
MalI	GATC	4 cut(s)	204, 437, 990, 1622
MbiI	CCGCTC	1 cut(s)	53
MboI	GATC	4 cut(s)	202, 435, 988, 1620
MboII	GAAGA	4 cut(s)	56, 175, 566, 584
MfeI	CAATTG	1 cut(s)	35
MflI	RGATCY	1 cut(s)	988
MhlI	GDGCHC	1 cut(s)	627
Mph1103I	ATGCAT	1 cut(s)	1357
MroXI	GAANNNNTTC	1 cut(s)	1631
MseI	TTAA	9 cut(s)	278, 390, 447, 806, 818, 861, 1068, 1424, 1647
MslI	CAYNNNNRTG	2 cut(s)	111, 977
MspA1I	CMGCKG	1 cut(s)	566
MspI	CCGG	2 cut(s)	215, 471
MspR9I	CCNGG	2 cut(s)	472, 1544
MssI	GTTTAAAC	1 cut(s)	448
MunI	CAATTG	1 cut(s)	35
Mva1269I	GAATGC	3 cut(s)	117, 984, 1203
MvaI	CCWGG	1 cut(s)	1544
MvnI	CGCG	2 cut(s)	426, 434
MwoI	GCNNNNNNNGC	3 cut(s)	94, 416, 1207
NciI	CCSGG	1 cut(s)	472
NdeII	GATC	4 cut(s)	202, 435, 988, 1620
NheI	GCTAGC	1 cut(s)	406
NlaIV	GGNNCC	1 cut(s)	1539
NmuCI	GTSAC	2 cut(s)	461, 1289
NsbI	TGCGCA	1 cut(s)	1259
NsiI	ATGCAT	1 cut(s)	1357
NspI	RCATGY	3 cut(s)	683, 1297, 1327
PagI	TCATGA	3 cut(s)	357, 847, 1051
PasI	CCCWGGG	1 cut(s)	1543
PciI	ACATGT	2 cut(s)	1293, 1323
PciSI	GCTCTTC	1 cut(s)	549
PcsI	WCGNNNNNNNCGW	2 cut(s)	74, 423
PctI	GAATGC	3 cut(s)	117, 984, 1203
PdmI	GAANNNNTTC	1 cut(s)	1631
PfeI	GAWTC	3 cut(s)	322, 335, 1046
PflFI	GACNNNGTC	1 cut(s)	1529
PflMI	CCANNNNNTGG	1 cut(s)	1286
PkrI	GCNGC	5 cut(s)	52, 155, 193, 678, 1383
PmeI	GTTTAAAC	1 cut(s)	448
PscI	ACATGT	2 cut(s)	1293, 1323
PshAI	GACNNNNGTC	1 cut(s)	290
PshBI	ATTAAT	1 cut(s)	806
Psp6I	CCWGG	1 cut(s)	1542
PspFI	CCCAGC	1 cut(s)	1402
PspGI	CCWGG	1 cut(s)	1542
PspN4I	GGNNCC	1 cut(s)	1539
PspPI	GGNCC	1 cut(s)	483
PstNI	CAGNNNCTG	1 cut(s)	1286
PsuI	RGATCY	1 cut(s)	988
PsyI	GACNNNGTC	1 cut(s)	1529
PvuII	CAGCTG	1 cut(s)	566
RsaI	GTAC	4 cut(s)	198, 1186, 1369, 1598
RsaNI	GTAC	4 cut(s)	197, 1185, 1368, 1597
RseI	CAYNNNNRTG	2 cut(s)	111, 977
SalI	GTCGAC	1 cut(s)	662
SapI	GCTCTTC	1 cut(s)	549
SaqAI	TTAA	9 cut(s)	278, 390, 447, 806, 818, 861, 1068, 1424, 1647
SatI	GCNGC	5 cut(s)	51, 154, 192, 677, 1382
Sau3AI	GATC	4 cut(s)	202, 435, 988, 1620
Sau96I	GGNCC	1 cut(s)	483
ScrFI	CCNGG	2 cut(s)	472, 1544
SduI	GDGCHC	1 cut(s)	627
SfaNI	GCATC	4 cut(s)	259, 428, 1364, 1429
SfcI	CTRYAG	1 cut(s)	367
SinI	GGWCC	1 cut(s)	483
SmiMI	CAYNNNNRTG	2 cut(s)	111, 977
SmlI	CTYRAG	2 cut(s)	620, 1248
SmoI	CTYRAG	2 cut(s)	620, 1248
SspI	AATATT	1 cut(s)	1134
SspMI	CTAG	5 cut(s)	125, 407, 914, 932, 1520
StyD4I	CCNGG	2 cut(s)	470, 1542
TaaI	ACNGT	3 cut(s)	838, 1117, 1529
TaiI	ACGT	2 cut(s)	601, 663
TaqI	TCGA	6 cut(s)	80, 490, 570, 663, 810, 1009
TatI	WGTACW	2 cut(s)	1367, 1596
TauI	GCSGC	3 cut(s)	53, 156, 194
TfiI	GAWTC	3 cut(s)	322, 335, 1046
Tru1I	TTAA	9 cut(s)	278, 390, 447, 806, 818, 861, 1068, 1424, 1647
Tru9I	TTAA	9 cut(s)	278, 390, 447, 806, 818, 861, 1068, 1424, 1647
TscAI	CASTG	3 cut(s)	212, 841, 1120
TseFI	GTSAC	2 cut(s)	461, 1289
TseI	GCWGC	2 cut(s)	676, 1381
Tsp45I	GTSAC	2 cut(s)	461, 1289
TspDTI	ATGAA	7 cut(s)	17, 346, 561, 686, 1007, 1068, 1569
TspGWI	ACGGA	1 cut(s)	449
TspRI	CASTG	3 cut(s)	212, 841, 1120
Tth111I	GACNNNGTC	1 cut(s)	1529
Van91I	CCANNNNNTGG	1 cut(s)	1286
VpaK11BI	GGWCC	1 cut(s)	483
VspI	ATTAAT	1 cut(s)	806
XapI	RAATTY	4 cut(s)	455, 637, 875, 1055
XceI	RCATGY	3 cut(s)	683, 1297, 1327
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1358
XmiI	GTMKAC	2 cut(s)	663, 696
XmnI	GAANNNNTTC	1 cut(s)	1631
XspI	CTAG	5 cut(s)	125, 407, 914, 932, 1520
ZraI	GACGTC	1 cut(s)	599
Zsp2I	ATGCAT	1 cut(s)	1357

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.