Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0006062

Physical Location & Seq

Genomic Coordinates Reverse (-)

21122896 .. 21131098

Gene Structure 8203 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g26250.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2427 bp

ATGCATCCCTTCTGCTGCCTCTCCACTCTCTCCGACCACAGCCTCTCCCCCTCGCCGGACCTCCACATGACCTCGCCATTCGGTAGATCCGATCCGCACACAACCCGGCTCAGTCTCCACAAGGAGCCGCCGTCCAGCAACAACAACCTCAGCAACCATTCCAGCGTCGAATACGGCCGCCTCAGCCAGCGCACCACCGCGGCTGCCGCCGCCGCAGCCATCGCCGCGGCGGAGGCCTTGACGCGGCATCCGAGCGCGAGGGAGCAGCCGGTGGATGTGAGGATAAACGACATCGTCGGGAATGGCGTATCGGGGATACTGTATAAGTGGGTGAATTACGGTAAGGGATGGCGGCCGAGGTGGTTCGTTTTGCAAGATGGAGTGCTTTCGTATTATAAGATTCACGGGCCTGATAGGATCGCTGTGACGCCGGAGACGGAGAAAGGCTCCAAGGTCATCGGCGAGACGTCGAATCGGAGACTTTCGAGGCATCGGAATCCTAGTCCTCAGAAGCTACGCCGCAAGCCATTCGGCGAAGTTCATCTCAAGGTCTCTAGTATCCGTGAAAGCAAATCAGATGATAAGCGGTTCTCGATCTTCACCGGTACAAAGAGGCTGCATTTGAGGGCAGAATCGAGTGACGATCGATGCGCCTGGGTGGAAGCATTGCAGGCCGTGAAAGACATGTTTCCGCGGATGTCCAACAGTGAGTTGATGGCTCCCGTGGACAATGTGGCCGTGTCTACTGATAAATTGAGGCAGCGCTTGGCCGAAGAAGGTGTTAGGGAGGCAGCCATTCAGGAAAGTGAACAGATAATGAAGACAGAGTTTGCTGGATTGCAGAACCAGCTTCTTCTGCTTAAGCAGAAACAGTGGCTCCTAATTGACACGCTACGACAGTTAGAGACAGAAAAGGTAGATTTGGAAAATACAGTGGTTGATGAGAGCCGACAGTTGAAAGATTCTGGGGCATCCTCTAGATCAAGACAAGACAAATTCAGTGAAGGAAGTGCAACTGAATCTGAGGATGATAATGAAAGACCTGATGCTGCAGAGGAAGAAACGGATGAAGAGGACAATGCTTTCTTTGATACTCGTGATTTTTTATCATCAAGTTCTTTCAAAAGTAATGGGTCTGATTATCGGATATCTTCCATGTCTTCTTCAGATGATGATGGGCTCTATGCCTTTGAATCTGAAGATGGTACAGATCCATCACTCAGATCTGTTGGGATGGACTTTCCTGTTGTCAAGCGGCGTAAGAAATTGCCTGACCCTGTGGAGAAAGAAAAGAGTGTTAGTCTTTGGTCGATGATTAAGGACAACATTGGGAAGGACCTCACAAAAATCTGTCTCCCTGTATACTTCAACGAGCCTCTATCTTCTCTACAAAAAGGTTTTGAGGATTTGGAATATTCATACCTCCTTGATCGAGCATATGAATGGGGCAAAAGGGGTAATAGCCTTATGAGGATTCTTAATGTGGCTGCTTTTGCTGTATCTGGATATGCTTCAACTGAAGGAAGGATGTGCAAACCATTCAATCCATTATTAGGGGAAACATATGAGGCTGACTATCCAGACAAAGGCCTTCGGTTTTTCTCAGAGAAGGTTAGTCATCACCCCATGATTCTTGCTTGCCATTGTGAGGGTAATGGATGGAAATTCTATGGAGACAGCAATTTGAAGAGCAAATTCTGGGGCCGCTCAATTCAGCTTGATCCTGTTGGTGTTTTGACCTTGGAATTTGATGATGGTGAAATTCTTCAATGGAGTAAAGTCACAACTTCCATTTACAACCTCATATTGGGAAAGCTTTACTGTGATCACTATGGTACAATGCGAATACAGGGAAAGCATGAATATCAATGTAAGTTGAAATTTAAGGAGCAGTCTATCATCGACCGAAATCCTCACCAGGTTCAAGGTATAGTTCAAGATAAGCATGGGAAAACAGTGGCAACTTTGTTTGGAAAATGGGATGAAAGCATGCATTATGTGGATGGAGACTGTTCAGGGAAGGGAAAATTTGAGTCCTTATCTGATGCCCGCCTGCTCTGGAAGAGGAGCAAGCCACCCAAGTTCCCAACCAGATATAACTTAACACGCTTTGCCATTACAATGAACGAACTCCTTCCTGGATTGAAGGAGAAGTTGCCCCCAACAGATTCAAGGCTCAGACCAGATCAAAGGTATCTGGAAAATGGGGAATATGAAATGGCAAACTCTGAGAAATTGAGGCTTGAGCAGAGGCAACGGCAGGCTCGAAAGATGCAAGAAAGTGGTTGGAAACCGCAGTGGTTTGCAAAGGATAAAGCAAGCGATACTTACCGGTATACTGGCGGATATTGGGAGGCAAGAGAAGAAGGGAAGTGGGATGCTTGTCCCGATATTTTTGGCCATGTTCCGTCTGAACAAGTTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Oxysterol_BP PH_11

Protein Analysis

809

Amino Acids

92.05

Weight (kDa)

6.51

Isoelectric Point (pI)

47.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH	PF00169	104 - 226	1.3e-11	PH domain
PH_11	PF15413	108 - 224	1.6e-13	Pleckstrin homology domain
Oxysterol_BP	PF01237	434 - 644	5.8e-81	Oxysterol-binding protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006062)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77730 AT2G31020 AT4G08180 AT4G08180 AT4G08180 AT4G08180
fragaria_vesca	FvH4_2g26250 FvH4_2g26250 FvH4_2g26250
malus_domestica	MD00G1220800.v1.1 MD08G1170000.v1.1 MD15G1357000.v1.1
prunus_persica	Prupe.1G504000_v2.0.a1 Prupe.1G504000_v2.0.a1
pyrus_communis	pycom08g14550 pycom15g31910
rosa_chinensis	RchiOBHm_Chr6g0294861
rosa_laevigata	RLG00000011836
rosa_multiflora	Rmu_co8074688.1_g000001 Rmu_sc0008966.1_g000015
rosa_roxburghii	Rroxscaffold_7G00172950
rosa_rugosa	Rorug06G0247200
rosa_samantha	Rh6AG360900 Rh6BG367500 Rh6CG374700 Rh6DG361400
rosa_wichuraiana	Rw6G031480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	396
AatII	GACGTC	1 cut(s)	470
AccBSI	CCGCTC	1 cut(s)	1707
AccI	GTMKAC	3 cut(s)	743, 1362, 2336
AccII	CGCG	5 cut(s)	200, 227, 244, 257, 694
AclWI	GGATC	5 cut(s)	81, 86, 425, 1205, 1715
AcoI	YGGCCR	5 cut(s)	175, 353, 735, 768, 2398
AcsI	RAATTY	7 cut(s)	995, 1664, 1694, 1745, 1761, 1880, 2027
AcuI	CTGAAG	3 cut(s)	1149, 1218, 1539
AcyI	GRCGYC	2 cut(s)	428, 467
AfaI	GTAC	3 cut(s)	607, 1207, 1837
AfeI	AGCGCT	1 cut(s)	764
AfiI	CCNNNNNNNGG	6 cut(s)	55, 243, 1553, 1586, 1648, 1807
AflII	CTTAAG	1 cut(s)	860
AflIII	ACRYGT	1 cut(s)	684
AgeI	ACCGGT	2 cut(s)	602, 2331
AjnI	CCWGG	3 cut(s)	653, 1917, 2137
AluBI	AGCT	4 cut(s)	514, 850, 1717, 1816
AluI	AGCT	4 cut(s)	514, 850, 1717, 1816
Alw26I	GTCTC	9 cut(s)	119, 428, 458, 472, 556, 899, 1358, 1668, 2001
AlwI	GGATC	5 cut(s)	81, 86, 425, 1205, 1715
Aor51HI	AGCGCT	1 cut(s)	764
ApeKI	GCWGC	9 cut(s)	15, 203, 215, 265, 616, 760, 791, 1049, 1487
ApoI	RAATTY	7 cut(s)	995, 1664, 1694, 1745, 1761, 1880, 2027
AsiGI	ACCGGT	2 cut(s)	602, 2331
Asp700I	GAANNNNTTC	2 cut(s)	1764, 2133
AspLEI	GCGC	4 cut(s)	192, 257, 653, 765
AspS9I	GGNCC	4 cut(s)	58, 407, 1336, 1702
AsuC2I	CCSGG	1 cut(s)	106
AsuHPI	GGTGA	5 cut(s)	343, 592, 1613, 1769, 1907
AvaII	GGWCC	2 cut(s)	58, 1336
BalI	TGGCCA	1 cut(s)	2400
BanII	GRGCYC	1 cut(s)	1182
BauI	CACGAG	1 cut(s)	1095
BbsI	GAAGAC	2 cut(s)	827, 1152
BbvCI	CCTCAGC	2 cut(s)	149, 182
BbvI	GCAGC	9 cut(s)	2, 190, 227, 277, 603, 772, 803, 1036, 1474
BceAI	ACGGC	5 cut(s)	115, 190, 659, 722, 2273
BcgI	CGANNNNNNTGC	2 cut(s)	511, 545
BciT130I	CCWGG	3 cut(s)	655, 1919, 2139
BciVI	GTATCC	2 cut(s)	309, 569
BclI	TGATCA	1 cut(s)	1825
BcnI	CCSGG	1 cut(s)	106
BcoDI	GTCTC	9 cut(s)	119, 428, 458, 472, 556, 899, 1358, 1668, 2001
BfaI	CTAG	3 cut(s)	501, 555, 978
BfmI	CTRYAG	1 cut(s)	1050
BfoI	RGCGCY	1 cut(s)	766
BfrI	CTTAAG	1 cut(s)	860
BfuI	GTATCC	2 cut(s)	309, 569
BglII	AGATCT	1 cut(s)	1223
Bme1390I	CCNGG	4 cut(s)	106, 655, 1919, 2139
Bme18I	GGWCC	2 cut(s)	58, 1336
BmgT120I	GGNCC	4 cut(s)	58, 407, 1336, 1702
BmiI	GGNNCC	5 cut(s)	126, 448, 720, 878, 1703
BmrFI	CCNGG	4 cut(s)	106, 655, 1919, 2139
BmsI	GCATC	9 cut(s)	13, 256, 499, 638, 980, 1036, 2035, 2262, 2368
BpiI	GAAGAC	2 cut(s)	827, 1152
BplI	GAGNNNNNCTC	2 cut(s)	431, 463
Bpu10I	CCTNAGC	2 cut(s)	149, 182
BpuEI	CTTGAG	2 cut(s)	530, 2264
BpuMI	CCSGG	1 cut(s)	106
Bsa29I	ATCGAT	1 cut(s)	646
BsaHI	GRCGYC	2 cut(s)	428, 467
BsaI	GGTCTC	1 cut(s)	556
BsaJI	CCNNGG	8 cut(s)	198, 225, 356, 450, 654, 692, 723, 1740
BsaWI	WCCGGW	2 cut(s)	602, 2331
BsaXI	ACNNNNNCTCC	6 cut(s)	29, 59, 116, 146, 861, 891
Bsc4I	CCNNNNNNNGG	6 cut(s)	55, 243, 1553, 1586, 1648, 1807
Bse118I	RCCGGY	3 cut(s)	268, 602, 2331
Bse1I	ACTGG	1 cut(s)	2344
Bse3DI	GCAATG	1 cut(s)	665
BseBI	CCWGG	3 cut(s)	655, 1919, 2139
BseCI	ATCGAT	1 cut(s)	646
BseDI	CCNNGG	8 cut(s)	198, 225, 356, 450, 654, 692, 723, 1740
BseLI	CCNNNNNNNGG	6 cut(s)	55, 243, 1553, 1586, 1648, 1807
BseMI	GCAATG	1 cut(s)	665
BseMII	CTCAG	9 cut(s)	124, 163, 196, 521, 1014, 1234, 1617, 2191, 2220
BseNI	ACTGG	1 cut(s)	2344
BseRI	GAGGAG	1 cut(s)	2080
BseX3I	CGGCCG	2 cut(s)	175, 353
BseXI	GCAGC	9 cut(s)	2, 190, 227, 277, 603, 772, 803, 1036, 1474
Bsh1236I	CGCG	5 cut(s)	200, 227, 244, 257, 694
Bsh1285I	CGRYCG	4 cut(s)	178, 356, 646, 1906
BshTI	ACCGGT	2 cut(s)	602, 2331
BshVI	ATCGAT	1 cut(s)	646
BsiEI	CGRYCG	4 cut(s)	178, 356, 646, 1906
BsiSI	CCGG	6 cut(s)	56, 106, 269, 431, 603, 2332
BslFI	GGGAC	1 cut(s)	2370
BslI	CCNNNNNNNGG	6 cut(s)	55, 243, 1553, 1586, 1648, 1807
BsmAI	GTCTC	9 cut(s)	119, 428, 458, 472, 556, 899, 1358, 1668, 2001
BsmBI	CGTCTC	2 cut(s)	428, 458
BsmFI	GGGAC	1 cut(s)	2370
Bso31I	GGTCTC	1 cut(s)	556
Bsp1286I	GDGCHC	1 cut(s)	1182
BspCNI	CTCAG	9 cut(s)	123, 162, 195, 520, 1015, 1233, 1616, 2190, 2221
BspDI	ATCGAT	1 cut(s)	646
BspFNI	CGCG	5 cut(s)	200, 227, 244, 257, 694
BspLI	GGNNCC	5 cut(s)	126, 448, 720, 878, 1703
BspMAI	CTGCAG	1 cut(s)	1054
BspPI	GGATC	5 cut(s)	81, 86, 425, 1205, 1715
BspQI	GCTCTTC	1 cut(s)	1682
BspTI	CTTAAG	1 cut(s)	860
BspTNI	GGTCTC	1 cut(s)	556
BsrBI	CCGCTC	1 cut(s)	1707
BsrDI	GCAATG	1 cut(s)	665
BsrFI	RCCGGY	3 cut(s)	268, 602, 2331
BsrI	ACTGG	1 cut(s)	2344
BssAI	RCCGGY	3 cut(s)	268, 602, 2331
BssECI	CCNNGG	8 cut(s)	198, 225, 356, 450, 654, 692, 723, 1740
BssNAI	GTATAC	2 cut(s)	1363, 2337
BssNI	GRCGYC	2 cut(s)	428, 467
BssSI	CACGAG	1 cut(s)	1095
BssT1I	CCWWGG	2 cut(s)	450, 1740
Bst1107I	GTATAC	2 cut(s)	1363, 2337
Bst2BI	CACGAG	1 cut(s)	1095
Bst2UI	CCWGG	3 cut(s)	655, 1919, 2139
Bst6I	CTCTTC	3 cut(s)	1065, 1682, 2057
BstACI	GRCGYC	2 cut(s)	428, 467
BstAFI	CTTAAG	1 cut(s)	860
BstDEI	CTNAG	9 cut(s)	110, 149, 182, 507, 1023, 1220, 1603, 2177, 2229
BstDSI	CCRYGG	4 cut(s)	198, 225, 692, 723
BstFNI	CGCG	5 cut(s)	200, 227, 244, 257, 694
BstH2I	RGCGCY	1 cut(s)	766
BstHHI	GCGC	4 cut(s)	192, 257, 653, 765
BstMAI	GTCTC	9 cut(s)	119, 428, 458, 472, 556, 899, 1358, 1668, 2001
BstMCI	CGRYCG	4 cut(s)	178, 356, 646, 1906
BstNI	CCWGG	3 cut(s)	655, 1919, 2139
BstNSI	RCATGY	2 cut(s)	688, 1993
BstSCI	CCNGG	4 cut(s)	104, 653, 1917, 2137
BstSFI	CTRYAG	1 cut(s)	1050
BstUI	CGCG	5 cut(s)	200, 227, 244, 257, 694
BstV1I	GCAGC	9 cut(s)	2, 190, 227, 277, 603, 772, 803, 1036, 1474
BstV2I	GAAGAC	2 cut(s)	827, 1152
BstX2I	RGATCY	3 cut(s)	86, 1210, 1223
BstYI	RGATCY	3 cut(s)	86, 1210, 1223
BstZ17I	GTATAC	2 cut(s)	1363, 2337
BstZI	CGGCCG	2 cut(s)	175, 353
Bsu15I	ATCGAT	1 cut(s)	646
BsuI	GTATCC	2 cut(s)	309, 569
BsuTUI	ATCGAT	1 cut(s)	646
BtgI	CCRYGG	4 cut(s)	198, 225, 692, 723
BtgZI	GCGATG	1 cut(s)	205
BtsI	GCAGTG	1 cut(s)	2303
BtsIMutI	CAGTG	6 cut(s)	712, 878, 939, 1006, 1962, 2303
CfoI	GCGC	4 cut(s)	192, 257, 653, 765
Cfr10I	RCCGGY	3 cut(s)	268, 602, 2331
Cfr13I	GGNCC	4 cut(s)	58, 407, 1336, 1702
Cfr42I	CCGCGG	3 cut(s)	201, 228, 695
ClaI	ATCGAT	1 cut(s)	646
CseI	GACGC	3 cut(s)	154, 250, 436
CsiI	ACCWGGT	1 cut(s)	1917
Csp6I	GTAC	3 cut(s)	606, 1206, 1836
CspAI	ACCGGT	2 cut(s)	602, 2331
CviAII	CATG	8 cut(s)	67, 685, 1156, 1627, 1859, 1946, 1990, 2402
CviQI	GTAC	3 cut(s)	606, 1206, 1836
DdeI	CTNAG	9 cut(s)	110, 149, 182, 507, 1023, 1220, 1603, 2177, 2229
EaeI	YGGCCR	5 cut(s)	175, 353, 735, 768, 2398
EagI	CGGCCG	2 cut(s)	175, 353
Eam1104I	CTCTTC	3 cut(s)	1065, 1682, 2057
EarI	CTCTTC	3 cut(s)	1065, 1682, 2057
EciI	GGCGGA	2 cut(s)	245, 2358
EclXI	CGGCCG	2 cut(s)	175, 353
Eco130I	CCWWGG	2 cut(s)	450, 1740
Eco147I	AGGCCT	2 cut(s)	236, 1590
Eco24I	GRGCYC	1 cut(s)	1182
Eco31I	GGTCTC	1 cut(s)	556
Eco32I	GATATC	1 cut(s)	1149
Eco47I	GGWCC	2 cut(s)	58, 1336
Eco47III	AGCGCT	1 cut(s)	764
Eco52I	CGGCCG	2 cut(s)	175, 353
Eco57I	CTGAAG	3 cut(s)	1149, 1218, 1539
EcoO109I	RGGNCCY	1 cut(s)	1336
EcoRII	CCWGG	3 cut(s)	653, 1917, 2137
EcoRV	GATATC	1 cut(s)	1149
EcoT14I	CCWWGG	2 cut(s)	450, 1740
EcoT22I	ATGCAT	2 cut(s)	6, 1995
EcoT38I	GRGCYC	1 cut(s)	1182
ErhI	CCWWGG	2 cut(s)	450, 1740
Esp3I	CGTCTC	2 cut(s)	428, 458
FaeI	CATG	8 cut(s)	70, 688, 1159, 1630, 1862, 1949, 1993, 2405
FalI	AAGNNNNNCTT	2 cut(s)	2311, 2343
FaqI	GGGAC	1 cut(s)	2370
FatI	CATG	8 cut(s)	66, 684, 1155, 1626, 1858, 1945, 1989, 2401
FauI	CCCGC	1 cut(s)	2057
FauNDI	CATATG	2 cut(s)	1438, 1564
FbaI	TGATCA	1 cut(s)	1825
FblI	GTMKAC	3 cut(s)	743, 1362, 2336
FriOI	GRGCYC	1 cut(s)	1182
FspBI	CTAG	3 cut(s)	501, 555, 978
GlaI	GCGC	4 cut(s)	191, 256, 652, 764
HaeII	RGCGCY	1 cut(s)	766
HapII	CCGG	6 cut(s)	56, 106, 269, 431, 603, 2332
HgaI	GACGC	3 cut(s)	154, 250, 436
HhaI	GCGC	4 cut(s)	192, 257, 653, 765
Hin1I	GRCGYC	2 cut(s)	428, 467
Hin1II	CATG	8 cut(s)	70, 688, 1159, 1630, 1862, 1949, 1993, 2405
Hin6I	GCGC	4 cut(s)	190, 255, 651, 763
HinP1I	GCGC	4 cut(s)	190, 255, 651, 763
HincII	GTYRAC	1 cut(s)	2422
HindII	GTYRAC	1 cut(s)	2422
HindIII	AAGCTT	1 cut(s)	1814
HpaII	CCGG	6 cut(s)	56, 106, 269, 431, 603, 2332
HphI	GGTGA	5 cut(s)	343, 592, 1613, 1769, 1907
Hpy166II	GTNNAC	6 cut(s)	727, 744, 809, 1363, 2337, 2422
Hpy8I	GTNNAC	6 cut(s)	727, 744, 809, 1363, 2337, 2422
Hpy99I	CGWCG	3 cut(s)	170, 299, 472
HpyCH4IV	ACGT	1 cut(s)	467
HpyF3I	CTNAG	9 cut(s)	110, 149, 182, 507, 1023, 1220, 1603, 2177, 2229
HpySE526I	ACGT	1 cut(s)	467
Hsp92I	GRCGYC	2 cut(s)	428, 467
Hsp92II	CATG	8 cut(s)	70, 688, 1159, 1630, 1862, 1949, 1993, 2405
HspAI	GCGC	4 cut(s)	190, 255, 651, 763
Ksp22I	TGATCA	1 cut(s)	1825
KspI	CCGCGG	3 cut(s)	201, 228, 695
LguI	GCTCTTC	1 cut(s)	1682
LmnI	GCTCC	7 cut(s)	124, 262, 452, 724, 882, 1888, 2067
Lsp1109I	GCAGC	9 cut(s)	2, 190, 227, 277, 603, 772, 803, 1036, 1474
LweI	GCATC	9 cut(s)	13, 256, 499, 638, 980, 1036, 2035, 2262, 2368
MabI	ACCWGGT	1 cut(s)	1917
MaeI	CTAG	3 cut(s)	501, 555, 978
MaeII	ACGT	1 cut(s)	467
MaeIII	GTNAC	3 cut(s)	424, 638, 1780
MbiI	CCGCTC	1 cut(s)	1707
MflI	RGATCY	3 cut(s)	86, 1210, 1223
MhlI	GDGCHC	1 cut(s)	1182
MlsI	TGGCCA	1 cut(s)	2400
MluNI	TGGCCA	1 cut(s)	2400
MlyI	GAGTC	1 cut(s)	2042
MmeI	TCCRAC	3 cut(s)	57, 726, 2267
Mox20I	TGGCCA	1 cut(s)	2400
Mph1103I	ATGCAT	2 cut(s)	6, 1995
MroXI	GAANNNNTTC	2 cut(s)	1764, 2133
MscI	TGGCCA	1 cut(s)	2400
MseI	TTAA	5 cut(s)	861, 1317, 1479, 1884, 2102
MslI	CAYNNNNRTG	2 cut(s)	1441, 2120
Msp20I	TGGCCA	1 cut(s)	2400
MspA1I	CMGCKG	3 cut(s)	200, 227, 694
MspCI	CTTAAG	1 cut(s)	860
MspI	CCGG	6 cut(s)	56, 106, 269, 431, 603, 2332
MspR9I	CCNGG	4 cut(s)	106, 655, 1919, 2139
MvaI	CCWGG	3 cut(s)	655, 1919, 2139
MvnI	CGCG	5 cut(s)	200, 227, 244, 257, 694
NciI	CCSGG	1 cut(s)	106
NdeI	CATATG	2 cut(s)	1438, 1564
NlaIII	CATG	8 cut(s)	70, 688, 1159, 1630, 1862, 1949, 1993, 2405
NlaIV	GGNNCC	5 cut(s)	126, 448, 720, 878, 1703
NmeAIII	GCCGAG	1 cut(s)	381
NmuCI	GTSAC	3 cut(s)	424, 638, 1780
NsiI	ATGCAT	2 cut(s)	6, 1995
NspI	RCATGY	2 cut(s)	688, 1993
PaeI	GCATGC	1 cut(s)	1993
PceI	AGGCCT	2 cut(s)	236, 1590
PciI	ACATGT	1 cut(s)	684
PciSI	GCTCTTC	1 cut(s)	1682
PcsI	WCGNNNNNNNCGW	4 cut(s)	87, 248, 303, 2263
PdmI	GAANNNNTTC	2 cut(s)	1764, 2133
PflFI	GACNNNGTC	1 cut(s)	293
PfoI	TCCNGGA	1 cut(s)	2137
PinAI	ACCGGT	2 cut(s)	602, 2331
Ple19I	CGATCG	1 cut(s)	646
PleI	GAGTC	1 cut(s)	2041
PpsI	GAGTC	1 cut(s)	2041
PpuMI	RGGWCCY	1 cut(s)	1336
PscI	ACATGT	1 cut(s)	684
PsiI	TTATAA	1 cut(s)	396
Psp5II	RGGWCCY	1 cut(s)	1336
Psp6I	CCWGG	3 cut(s)	653, 1917, 2137
PspGI	CCWGG	3 cut(s)	653, 1917, 2137
PspN4I	GGNNCC	5 cut(s)	126, 448, 720, 878, 1703
PspPI	GGNCC	4 cut(s)	58, 407, 1336, 1702
PspPPI	RGGWCCY	1 cut(s)	1336
PstI	CTGCAG	1 cut(s)	1054
PsuI	RGATCY	3 cut(s)	86, 1210, 1223
PsyI	GACNNNGTC	1 cut(s)	293
PvuI	CGATCG	1 cut(s)	646
RsaI	GTAC	3 cut(s)	607, 1207, 1837
RsaNI	GTAC	3 cut(s)	606, 1206, 1836
RseI	CAYNNNNRTG	2 cut(s)	1441, 2120
SacII	CCGCGG	3 cut(s)	201, 228, 695
SapI	GCTCTTC	1 cut(s)	1682
SaqAI	TTAA	5 cut(s)	861, 1317, 1479, 1884, 2102
Sau96I	GGNCC	4 cut(s)	58, 407, 1336, 1702
SchI	GAGTC	1 cut(s)	2042
ScrFI	CCNGG	4 cut(s)	106, 655, 1919, 2139
SduI	GDGCHC	1 cut(s)	1182
SexAI	ACCWGGT	1 cut(s)	1917
SfaNI	GCATC	9 cut(s)	13, 256, 499, 638, 980, 1036, 2035, 2262, 2368
SfcI	CTRYAG	1 cut(s)	1050
Sfr303I	CCGCGG	3 cut(s)	201, 228, 695
SgrBI	CCGCGG	3 cut(s)	201, 228, 695
SinI	GGWCC	2 cut(s)	58, 1336
SmiMI	CAYNNNNRTG	2 cut(s)	1441, 2120
SmlI	CTYRAG	3 cut(s)	545, 860, 2243
SmoI	CTYRAG	3 cut(s)	545, 860, 2243
SphI	GCATGC	1 cut(s)	1993
SseBI	AGGCCT	2 cut(s)	236, 1590
SspI	AATATT	1 cut(s)	1415
SspMI	CTAG	3 cut(s)	501, 555, 978
StuI	AGGCCT	2 cut(s)	236, 1590
StyD4I	CCNGG	4 cut(s)	104, 653, 1917, 2137
StyI	CCWWGG	2 cut(s)	450, 1740
TaiI	ACGT	1 cut(s)	470
TaqII	GACCGA	1 cut(s)	1920
Tru1I	TTAA	5 cut(s)	861, 1317, 1479, 1884, 2102
Tru9I	TTAA	5 cut(s)	861, 1317, 1479, 1884, 2102
TscAI	CASTG	6 cut(s)	712, 878, 939, 1006, 1962, 2303
TseFI	GTSAC	3 cut(s)	424, 638, 1780
TseI	GCWGC	9 cut(s)	15, 203, 215, 265, 616, 760, 791, 1049, 1487
Tsp45I	GTSAC	3 cut(s)	424, 638, 1780
TspGWI	ACGGA	4 cut(s)	452, 551, 1079, 2397
TspRI	CASTG	6 cut(s)	712, 878, 939, 1006, 1962, 2303
Tth111I	GACNNNGTC	1 cut(s)	293
Vha464I	CTTAAG	1 cut(s)	860
VpaK11BI	GGWCC	2 cut(s)	58, 1336
XapI	RAATTY	7 cut(s)	995, 1664, 1694, 1745, 1761, 1880, 2027
XbaI	TCTAGA	1 cut(s)	977
XceI	RCATGY	2 cut(s)	688, 1993
XmiI	GTMKAC	3 cut(s)	743, 1362, 2336
XmnI	GAANNNNTTC	2 cut(s)	1764, 2133
XspI	CTAG	3 cut(s)	501, 555, 978
ZraI	GACGTC	1 cut(s)	468
Zsp2I	ATGCAT	2 cut(s)	6, 1995

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.