Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008966.1

Orthogroup ID

OG0006062

Physical Location & Seq

Genomic Coordinates Forward (+)

74855 .. 83474

Gene Structure 8620 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008966.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2394 bp

atgagggttgaagttgcgcttgagacaaaactgcttagacccgaatcccaagtcaaagacgtgaaagccattaacaatttccccgtcaaaactcaccaaaacacccccaacgactcagtaactcactctccactactttcccgccacgagtccccttcacccacgaccacatgtctctctcccagcaacccggcggccgtctccaccataaatcccctgcatccttcccgcaccctaacatatcccctccaaaagagaagaaaaaaagcccggaaactcataacacgtactgctgtgacgactgatatgaccaaccgcctggcgccttttaaagttccgcaccataacagttcggatggagttctttcgtattataagattcacggacctgataggatcgtcgttacgccggagacggagaaaggttctaaggtcatcggcgaaacgtcgaatcggagactttcgaggcataggagtcccaattctcaacagctacgccgcaagcccttcggcgaagttcatctcaaggtctctagtatccgtgaaagcaaatcagatgataggcggttctcaatcttcaccggtacaaagaggctgcatttgagggcagaatcgagcgatgatcgacttgcttgggtggaagcattgcaggccgtgaaagacatgtttccgcggatttccaacagtgaattgatggctccggtagacaatgtagcggtgtctactgagaaattgaggcagcgcctggtcgaagaaggtgttagggaggcagccattcaggaaagtgaacagattatgaagacagagtttgctgcattgcataaccagcttcttctgctcaagcagaaacagtggctcctaattgacacactacgacagttagagacagaaaaggtagatttggagaatacagtggttgatgagagccgacagctcaaagattctggagcttcctctagatcaagacaagacaaatttagtgaaggaagtgcaactgaatctgatgatgataatgaaagagttgatgctgcagaagaagaaacggatgaagaggacaatgccttctttgatacgcgtgattttctatcatcaagttctttcaaaagtaatgggtctgattatcggatatcttccttctcttcagatgatgatggcttgtatgccattgaatctgaagatggtacagatccagcactcagagctgattttccatttgtcaagcgacgtaagaaattgcctgaccctgtggagaaagagaagtgtgttagtctttggtcgatgattaaggacaacattgggaaggacctcacgaaaatctgtctccctgtatacttcaatgagcctctatcttctctacaaaaatgttttgaggatttggaatattcatacctccttgatcgagcatatgaatggggcaaaaggggtaatagccttatgaggattcttaatgtggctgcttttgctgtatctggatatgcttcaactgaaggaaggatgtgcaaaccgttcaatccattattaggggaaacatatgaggctgactatccagataaaggccttcggtttttctcagagaaggttagtcatcaccccatgattattgcttgccattgtgagggtagaggatggaaattctatggagatagcaatttgaaaagcaaattctggggccgctcaattcagcttgatcctgttggtgttctgaccttggaatttgatgatggtgaaattcttcaatggagtaaagttacaacttccatttacaacctcatattaggaaagctttactgtgatcactacggtaccatgcgaatacagggaaagcatgaatatcaatgtaggctgaaatttaaggagcagtctatcattgaccgaaatcctcaccaggtacaaggtatagttcaagataagcatgggaaaacagtggcaacggtgtttggaaaatgggatgagagcatgcattatgttaatggagactgttcagggaagggaaaattcgagtctttatctgatgcccgcctgctctggaagaggagcaagccacctaagttccctactagatataacttaacacgctttgccatcacaatgaacgaactctcgcctggattgaaggagaagttgcccccaacagattcaaggcttagaccagatcaaaggtatctggaaaatggggaatatgaaatggcaaattccgagaagttgaggctagagcagaggcaacggcaggctcgaaagatgcaagaaagtggttggaaaccgcagtggtttgcaaaggataaagcaagtgatacttaccggtatactggaggatattgggaggcaagagaacgaagaaattgggacggttgtcccgatatatttggccaagttccttctgaacaacttgactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Oxysterol_BP PH_11

Protein Analysis

797

Amino Acids

91.42

Weight (kDa)

8.48

Isoelectric Point (pI)

48.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006062)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77730 AT2G31020 AT4G08180 AT4G08180 AT4G08180 AT4G08180
fragaria_vesca	FvH4_2g26250 FvH4_2g26250 FvH4_2g26250
malus_domestica	MD00G1220800.v1.1 MD08G1170000.v1.1 MD15G1357000.v1.1
prunus_persica	Prupe.1G504000_v2.0.a1 Prupe.1G504000_v2.0.a1
pyrus_communis	pycom08g14550 pycom15g31910
rosa_chinensis	RchiOBHm_Chr6g0294861
rosa_laevigata	RLG00000011836
rosa_multiflora	Rmu_co8074688.1_g000001 Rmu_sc0008966.1_g000015
rosa_roxburghii	Rroxscaffold_7G00172950
rosa_rugosa	Rorug06G0247200
rosa_samantha	Rh6AG360900 Rh6BG367500 Rh6CG374700 Rh6DG361400
rosa_wichuraiana	Rw6G031480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	375
Acc65I	GGTACC	1 cut(s)	1802
AccB1I	GGYRCC	2 cut(s)	322, 1802
AccBSI	CCGCTC	1 cut(s)	1674
AccI	GTMKAC	4 cut(s)	705, 722, 1329, 2303
AccII	CGCG	2 cut(s)	673, 1075
AclWI	GGATC	3 cut(s)	404, 1181, 1682
AcoI	YGGCCR	2 cut(s)	195, 2365
AcsI	RAATTY	8 cut(s)	974, 1631, 1661, 1712, 1728, 1847, 1994, 2191
AcuI	CTGAAG	3 cut(s)	1125, 1194, 1506
AcyI	GRCGYC	1 cut(s)	323
AfaI	GTAC	5 cut(s)	289, 586, 1183, 1804, 1890
AfiI	CCNNNNNNNGG	3 cut(s)	1520, 1553, 1615
AflIII	ACRYGT	4 cut(s)	170, 284, 663, 1073
AgeI	ACCGGT	2 cut(s)	581, 2298
AhdI	GACNNNNNGTC	1 cut(s)	171
AjiI	CACGTC	1 cut(s)	61
AjnI	CCWGG	4 cut(s)	318, 744, 1884, 2104
AluBI	AGCT	7 cut(s)	493, 829, 934, 950, 1202, 1684, 1783
AluI	AGCT	7 cut(s)	493, 829, 934, 950, 1202, 1684, 1783
Alw26I	GTCTC	9 cut(s)	17, 179, 205, 407, 451, 535, 878, 1325, 1968
AlwI	GGATC	3 cut(s)	404, 1181, 1682
AlwNI	CAGNNNCTG	1 cut(s)	745
AoxI	GGCC	5 cut(s)	195, 651, 1555, 1669, 2365
ApeKI	GCWGC	6 cut(s)	595, 739, 770, 812, 1028, 1454
ApoI	RAATTY	8 cut(s)	974, 1631, 1661, 1712, 1728, 1847, 1994, 2191
ArsI	GACNNNNNNTTYG	2 cut(s)	36, 68
AsiGI	ACCGGT	2 cut(s)	581, 2298
Asp700I	GAANNNNTTC	1 cut(s)	1731
Asp718I	GGTACC	1 cut(s)	1802
AspLEI	GCGC	3 cut(s)	19, 325, 744
AspS9I	GGNCC	3 cut(s)	386, 1303, 1669
AsuC2I	CCSGG	2 cut(s)	191, 271
AsuHPI	GGTGA	6 cut(s)	86, 150, 571, 1580, 1736, 1874
AvaII	GGWCC	2 cut(s)	386, 1303
BaeI	ACNNNNGTAYC	2 cut(s)	1786, 1819
BalI	TGGCCA	1 cut(s)	2367
BanI	GGYRCC	2 cut(s)	322, 1802
BauI	CACGAG	1 cut(s)	146
BbsI	GAAGAC	1 cut(s)	806
BbvI	GCAGC	6 cut(s)	582, 751, 782, 799, 1015, 1441
BccI	CCATC	7 cut(s)	350, 688, 1145, 1172, 1620, 1715, 2090
BceAI	ACGGC	3 cut(s)	182, 638, 2240
BcgI	CGANNNNNNTGC	2 cut(s)	490, 524
BciT130I	CCWGG	4 cut(s)	320, 746, 1886, 2106
BciVI	GTATCC	1 cut(s)	548
BclI	TGATCA	1 cut(s)	1792
BcnI	CCSGG	2 cut(s)	191, 271
BcoDI	GTCTC	9 cut(s)	17, 179, 205, 407, 451, 535, 878, 1325, 1968
BfaI	CTAG	4 cut(s)	534, 957, 2058, 2210
BfmI	CTRYAG	1 cut(s)	1029
BfoI	RGCGCY	2 cut(s)	326, 745
BfuI	GTATCC	1 cut(s)	548
BisI	GCNGC	9 cut(s)	195, 499, 596, 740, 771, 813, 1029, 1455, 1672
BlsI	GCNGC	9 cut(s)	196, 500, 597, 741, 772, 814, 1030, 1456, 1673
Bme1390I	CCNGG	6 cut(s)	191, 271, 320, 746, 1886, 2106
Bme18I	GGWCC	2 cut(s)	386, 1303
BmeRI	GACNNNNNGTC	1 cut(s)	171
BmgBI	CACGTC	1 cut(s)	61
BmgT120I	GGNCC	3 cut(s)	386, 1303, 1669
BmiI	GGNNCC	5 cut(s)	324, 699, 857, 1670, 1804
BmrFI	CCNGG	6 cut(s)	191, 271, 320, 746, 1886, 2106
BmsI	GCATC	4 cut(s)	229, 1015, 2002, 2229
BoxI	GACNNNNGTC	1 cut(s)	2349
BpiI	GAAGAC	1 cut(s)	806
BpmI	CTGGAG	2 cut(s)	966, 2328
BpuEI	CTTGAG	3 cut(s)	41, 509, 824
BpuMI	CCSGG	2 cut(s)	191, 271
BsaAI	YACGTR	1 cut(s)	287
BsaHI	GRCGYC	1 cut(s)	323
BsaI	GGTCTC	1 cut(s)	535
BsaJI	CCNNGG	2 cut(s)	671, 1707
BsaWI	WCCGGW	3 cut(s)	581, 700, 2298
BsaXI	ACNNNNNCTCC	4 cut(s)	112, 142, 840, 870
Bsc4I	CCNNNNNNNGG	3 cut(s)	1520, 1553, 1615
Bse118I	RCCGGY	2 cut(s)	581, 2298
Bse1I	ACTGG	1 cut(s)	2311
Bse3DI	GCAATG	2 cut(s)	644, 815
BseBI	CCWGG	4 cut(s)	320, 746, 1886, 2106
BseDI	CCNNGG	2 cut(s)	671, 1707
BseGI	GGATG	6 cut(s)	220, 361, 1051, 1500, 1631, 1954
BseLI	CCNNNNNNNGG	3 cut(s)	1520, 1553, 1615
BseMI	GCAATG	2 cut(s)	644, 815
BseMII	CTCAG	4 cut(s)	129, 717, 1210, 1584
BseNI	ACTGG	1 cut(s)	2311
BseRI	GAGGAG	1 cut(s)	2047
BseX3I	CGGCCG	1 cut(s)	195
BseXI	GCAGC	6 cut(s)	582, 751, 782, 799, 1015, 1441
BseYI	CCCAGC	1 cut(s)	182
Bsh1236I	CGCG	2 cut(s)	673, 1075
Bsh1285I	CGRYCG	1 cut(s)	198
BshFI	GGCC	5 cut(s)	197, 653, 1557, 1671, 2367
BshNI	GGYRCC	2 cut(s)	322, 1802
BshTI	ACCGGT	2 cut(s)	581, 2298
BsiEI	CGRYCG	1 cut(s)	198
BsiSI	CCGG	6 cut(s)	191, 271, 410, 582, 701, 2299
BslFI	GGGAC	4 cut(s)	136, 462, 2337, 2357
BslI	CCNNNNNNNGG	3 cut(s)	1520, 1553, 1615
BsmAI	GTCTC	9 cut(s)	17, 179, 205, 407, 451, 535, 878, 1325, 1968
BsmBI	CGTCTC	2 cut(s)	205, 407
BsmFI	GGGAC	4 cut(s)	136, 462, 2337, 2357
BsnI	GGCC	5 cut(s)	197, 653, 1557, 1671, 2367
Bso31I	GGTCTC	1 cut(s)	535
Bsp143I	GATC	8 cut(s)	396, 622, 959, 1186, 1396, 1687, 1792, 2152
BspANI	GGCC	5 cut(s)	197, 653, 1557, 1671, 2367
BspCNI	CTCAG	4 cut(s)	128, 718, 1209, 1583
BspFNI	CGCG	2 cut(s)	673, 1075
BspLI	GGNNCC	5 cut(s)	324, 699, 857, 1670, 1804
BspMAI	CTGCAG	1 cut(s)	1033
BspPI	GGATC	3 cut(s)	404, 1181, 1682
BspT107I	GGYRCC	2 cut(s)	322, 1802
BspTNI	GGTCTC	1 cut(s)	535
BsrBI	CCGCTC	1 cut(s)	1674
BsrDI	GCAATG	2 cut(s)	644, 815
BsrFI	RCCGGY	2 cut(s)	581, 2298
BsrI	ACTGG	1 cut(s)	2311
BssAI	RCCGGY	2 cut(s)	581, 2298
BssECI	CCNNGG	2 cut(s)	671, 1707
BssMI	GATC	8 cut(s)	396, 622, 959, 1186, 1396, 1687, 1792, 2152
BssNAI	GTATAC	2 cut(s)	1330, 2304
BssNI	GRCGYC	1 cut(s)	323
BssSI	CACGAG	1 cut(s)	146
BssT1I	CCWWGG	1 cut(s)	1707
Bst1107I	GTATAC	2 cut(s)	1330, 2304
Bst2BI	CACGAG	1 cut(s)	146
Bst2UI	CCWGG	4 cut(s)	320, 746, 1886, 2106
Bst6I	CTCTTC	3 cut(s)	1044, 1144, 2024
BstACI	GRCGYC	1 cut(s)	323
BstBAI	YACGTR	1 cut(s)	287
BstC8I	GCNNGC	8 cut(s)	503, 651, 1606, 1958, 2017, 2021, 2039, 2229
BstDEI	CTNAG	8 cut(s)	35, 115, 429, 726, 1196, 1570, 2046, 2144
BstDSI	CCRYGG	1 cut(s)	671
BstF5I	GGATG	6 cut(s)	220, 361, 1051, 1500, 1631, 1954
BstFNI	CGCG	2 cut(s)	673, 1075
BstH2I	RGCGCY	2 cut(s)	326, 745
BstHHI	GCGC	3 cut(s)	19, 325, 744
BstKTI	GATC	8 cut(s)	399, 625, 962, 1189, 1399, 1690, 1795, 2155
BstMAI	GTCTC	9 cut(s)	17, 179, 205, 407, 451, 535, 878, 1325, 1968
BstMBI	GATC	8 cut(s)	396, 622, 959, 1186, 1396, 1687, 1792, 2152
BstMCI	CGRYCG	1 cut(s)	198
BstMWI	GCNNNNNNNGC	5 cut(s)	650, 826, 835, 1199, 1460
BstNI	CCWGG	4 cut(s)	320, 746, 1886, 2106
BstNSI	RCATGY	3 cut(s)	174, 667, 1960
BstPAI	GACNNNNGTC	1 cut(s)	2349
BstSCI	CCNGG	6 cut(s)	189, 269, 318, 744, 1884, 2104
BstSFI	CTRYAG	1 cut(s)	1029
BstUI	CGCG	2 cut(s)	673, 1075
BstV1I	GCAGC	6 cut(s)	582, 751, 782, 799, 1015, 1441
BstV2I	GAAGAC	1 cut(s)	806
BstX2I	RGATCY	1 cut(s)	1186
BstXI	CCANNNNNNTGG	1 cut(s)	319
BstYI	RGATCY	1 cut(s)	1186
BstZ17I	GTATAC	2 cut(s)	1330, 2304
BstZI	CGGCCG	1 cut(s)	195
BsuI	GTATCC	1 cut(s)	548
BsuRI	GGCC	5 cut(s)	197, 653, 1557, 1671, 2367
BtgI	CCRYGG	1 cut(s)	671
BtgZI	GCGATG	1 cut(s)	633
BtrI	CACGTC	1 cut(s)	61
BtsCI	GGATG	6 cut(s)	220, 361, 1051, 1500, 1631, 1954
BtsI	GCAGTG	1 cut(s)	2270
BtsIMutI	CAGTG	5 cut(s)	691, 857, 918, 1929, 2270
Cac8I	GCNNGC	8 cut(s)	503, 651, 1606, 1958, 2017, 2021, 2039, 2229
CaiI	CAGNNNCTG	1 cut(s)	745
CfoI	GCGC	3 cut(s)	19, 325, 744
Cfr10I	RCCGGY	2 cut(s)	581, 2298
Cfr13I	GGNCC	3 cut(s)	386, 1303, 1669
Cfr42I	CCGCGG	1 cut(s)	674
CsiI	ACCWGGT	1 cut(s)	1884
Csp6I	GTAC	5 cut(s)	288, 585, 1182, 1803, 1889
CspAI	ACCGGT	2 cut(s)	581, 2298
CviAII	CATG	7 cut(s)	171, 664, 1594, 1807, 1826, 1913, 1957
CviQI	GTAC	5 cut(s)	288, 585, 1182, 1803, 1889
DdeI	CTNAG	8 cut(s)	35, 115, 429, 726, 1196, 1570, 2046, 2144
DinI	GGCGCC	1 cut(s)	324
DpnI	GATC	8 cut(s)	398, 624, 961, 1188, 1398, 1689, 1794, 2154
DpnII	GATC	8 cut(s)	396, 622, 959, 1186, 1396, 1687, 1792, 2152
DraI	TTTAAA	1 cut(s)	331
DriI	GACNNNNNGTC	1 cut(s)	171
EaeI	YGGCCR	2 cut(s)	195, 2365
EagI	CGGCCG	1 cut(s)	195
Eam1104I	CTCTTC	3 cut(s)	1044, 1144, 2024
Eam1105I	GACNNNNNGTC	1 cut(s)	171
EarI	CTCTTC	3 cut(s)	1044, 1144, 2024
EclXI	CGGCCG	1 cut(s)	195
Eco130I	CCWWGG	1 cut(s)	1707
Eco147I	AGGCCT	1 cut(s)	1557
Eco31I	GGTCTC	1 cut(s)	535
Eco32I	GATATC	1 cut(s)	1128
Eco47I	GGWCC	2 cut(s)	386, 1303
Eco52I	CGGCCG	1 cut(s)	195
Eco57I	CTGAAG	3 cut(s)	1125, 1194, 1506
EcoO109I	RGGNCCY	1 cut(s)	1303
EcoRII	CCWGG	4 cut(s)	318, 744, 1884, 2104
EcoRV	GATATC	1 cut(s)	1128
EcoT14I	CCWWGG	1 cut(s)	1707
EcoT22I	ATGCAT	1 cut(s)	1962
EgeI	GGCGCC	1 cut(s)	324
EheI	GGCGCC	1 cut(s)	324
ErhI	CCWWGG	1 cut(s)	1707
Esp3I	CGTCTC	2 cut(s)	205, 407
FaeI	CATG	7 cut(s)	174, 667, 1597, 1810, 1829, 1916, 1960
FalI	AAGNNNNNCTT	3 cut(s)	35, 2278, 2310
FaqI	GGGAC	4 cut(s)	136, 462, 2337, 2357
FatI	CATG	7 cut(s)	170, 663, 1593, 1806, 1825, 1912, 1956
FauI	CCCGC	3 cut(s)	149, 236, 2024
FauNDI	CATATG	2 cut(s)	1405, 1531
FbaI	TGATCA	1 cut(s)	1792
FblI	GTMKAC	4 cut(s)	705, 722, 1329, 2303
Fnu4HI	GCNGC	9 cut(s)	195, 499, 596, 740, 771, 813, 1029, 1455, 1672
FokI	GGATG	6 cut(s)	207, 368, 1058, 1507, 1638, 1961
Fsp4HI	GCNGC	9 cut(s)	195, 499, 596, 740, 771, 813, 1029, 1455, 1672
FspBI	CTAG	4 cut(s)	534, 957, 2058, 2210
GlaI	GCGC	3 cut(s)	18, 324, 743
GluI	GCNGC	9 cut(s)	195, 499, 596, 740, 771, 813, 1029, 1455, 1672
GsaI	CCCAGC	1 cut(s)	186
GsuI	CTGGAG	2 cut(s)	966, 2328
HaeII	RGCGCY	2 cut(s)	326, 745
HaeIII	GGCC	5 cut(s)	197, 653, 1557, 1671, 2367
HapII	CCGG	6 cut(s)	191, 271, 410, 582, 701, 2299
HhaI	GCGC	3 cut(s)	19, 325, 744
Hin1I	GRCGYC	1 cut(s)	323
Hin1II	CATG	7 cut(s)	174, 667, 1597, 1810, 1829, 1916, 1960
Hin6I	GCGC	3 cut(s)	17, 323, 742
HinP1I	GCGC	3 cut(s)	17, 323, 742
HindIII	AAGCTT	1 cut(s)	1781
HpaII	CCGG	6 cut(s)	191, 271, 410, 582, 701, 2299
HphI	GGTGA	6 cut(s)	86, 150, 571, 1580, 1736, 1874
Hpy166II	GTNNAC	5 cut(s)	706, 723, 788, 1330, 2304
Hpy8I	GTNNAC	5 cut(s)	706, 723, 788, 1330, 2304
Hpy99I	CGWCG	3 cut(s)	404, 451, 1227
HpyCH4IV	ACGT	4 cut(s)	60, 286, 446, 1225
HpyF10VI	GCNNNNNNNGC	5 cut(s)	650, 826, 835, 1199, 1460
HpyF3I	CTNAG	8 cut(s)	35, 115, 429, 726, 1196, 1570, 2046, 2144
HpySE526I	ACGT	4 cut(s)	60, 286, 446, 1225
Hsp92I	GRCGYC	1 cut(s)	323
Hsp92II	CATG	7 cut(s)	174, 667, 1597, 1810, 1829, 1916, 1960
HspAI	GCGC	3 cut(s)	17, 323, 742
KasI	GGCGCC	1 cut(s)	322
KpnI	GGTACC	1 cut(s)	1806
Ksp22I	TGATCA	1 cut(s)	1792
KspI	CCGCGG	1 cut(s)	674
Kzo9I	GATC	8 cut(s)	396, 622, 959, 1186, 1396, 1687, 1792, 2152
LmnI	GCTCC	5 cut(s)	703, 861, 947, 1855, 2034
Lsp1109I	GCAGC	6 cut(s)	582, 751, 782, 799, 1015, 1441
LweI	GCATC	4 cut(s)	229, 1015, 2002, 2229
MabI	ACCWGGT	1 cut(s)	1884
MaeI	CTAG	4 cut(s)	534, 957, 2058, 2210
MaeII	ACGT	4 cut(s)	60, 286, 446, 1225
MaeIII	GTNAC	4 cut(s)	118, 295, 403, 1747
MalI	GATC	8 cut(s)	398, 624, 961, 1188, 1398, 1689, 1794, 2154
MbiI	CCGCTC	1 cut(s)	1674
MboI	GATC	8 cut(s)	396, 622, 959, 1186, 1396, 1687, 1792, 2152
MflI	RGATCY	1 cut(s)	1186
MlsI	TGGCCA	1 cut(s)	2367
MluI	ACGCGT	1 cut(s)	1073
MluNI	TGGCCA	1 cut(s)	2367
Mly113I	GGCGCC	1 cut(s)	323
MlyI	GAGTC	4 cut(s)	107, 158, 484, 2009
MmeI	TCCRAC	2 cut(s)	705, 2234
Mox20I	TGGCCA	1 cut(s)	2367
Mph1103I	ATGCAT	1 cut(s)	1962
MroXI	GAANNNNTTC	1 cut(s)	1731
MscI	TGGCCA	1 cut(s)	2367
MseI	TTAA	7 cut(s)	72, 330, 1284, 1446, 1851, 1968, 2069
MslI	CAYNNNNRTG	2 cut(s)	1408, 2087
Msp20I	TGGCCA	1 cut(s)	2367
MspA1I	CMGCKG	1 cut(s)	673
MspI	CCGG	6 cut(s)	191, 271, 410, 582, 701, 2299
MspR9I	CCNGG	6 cut(s)	191, 271, 320, 746, 1886, 2106
MvaI	CCWGG	4 cut(s)	320, 746, 1886, 2106
MvnI	CGCG	2 cut(s)	673, 1075
MwoI	GCNNNNNNNGC	5 cut(s)	650, 826, 835, 1199, 1460
NarI	GGCGCC	1 cut(s)	323
NciI	CCSGG	2 cut(s)	191, 271
NdeI	CATATG	2 cut(s)	1405, 1531
NdeII	GATC	8 cut(s)	396, 622, 959, 1186, 1396, 1687, 1792, 2152
NlaIII	CATG	7 cut(s)	174, 667, 1597, 1810, 1829, 1916, 1960
NlaIV	GGNNCC	5 cut(s)	324, 699, 857, 1670, 1804
NmuCI	GTSAC	1 cut(s)	295
NsiI	ATGCAT	1 cut(s)	1962
NspI	RCATGY	3 cut(s)	174, 667, 1960
PaeI	GCATGC	1 cut(s)	1960
PceI	AGGCCT	1 cut(s)	1557
PciI	ACATGT	2 cut(s)	170, 663
PcsI	WCGNNNNNNNCGW	2 cut(s)	2230, 2352
PdmI	GAANNNNTTC	1 cut(s)	1731
PfeI	GAWTC	9 cut(s)	44, 379, 451, 611, 941, 998, 1169, 1441, 2135
PinAI	ACCGGT	2 cut(s)	581, 2298
PkrI	GCNGC	9 cut(s)	196, 500, 597, 741, 772, 814, 1030, 1456, 1673
PleI	GAGTC	4 cut(s)	107, 157, 483, 2008
PluTI	GGCGCC	1 cut(s)	326
PpsI	GAGTC	4 cut(s)	107, 157, 483, 2008
Ppu21I	YACGTR	1 cut(s)	287
PpuMI	RGGWCCY	1 cut(s)	1303
PscI	ACATGT	2 cut(s)	170, 663
PshAI	GACNNNNGTC	1 cut(s)	2349
PsiI	TTATAA	1 cut(s)	375
Psp5II	RGGWCCY	1 cut(s)	1303
Psp6I	CCWGG	4 cut(s)	318, 744, 1884, 2104
PspFI	CCCAGC	1 cut(s)	182
PspGI	CCWGG	4 cut(s)	318, 744, 1884, 2104
PspN4I	GGNNCC	5 cut(s)	324, 699, 857, 1670, 1804
PspPI	GGNCC	3 cut(s)	386, 1303, 1669
PspPPI	RGGWCCY	1 cut(s)	1303
PstI	CTGCAG	1 cut(s)	1033
PstNI	CAGNNNCTG	1 cut(s)	745
PsuI	RGATCY	1 cut(s)	1186
RsaI	GTAC	5 cut(s)	289, 586, 1183, 1804, 1890
RsaNI	GTAC	5 cut(s)	288, 585, 1182, 1803, 1889
RseI	CAYNNNNRTG	2 cut(s)	1408, 2087
SacII	CCGCGG	1 cut(s)	674
SaqAI	TTAA	7 cut(s)	72, 330, 1284, 1446, 1851, 1968, 2069
SatI	GCNGC	9 cut(s)	195, 499, 596, 740, 771, 813, 1029, 1455, 1672
Sau3AI	GATC	8 cut(s)	396, 622, 959, 1186, 1396, 1687, 1792, 2152
Sau96I	GGNCC	3 cut(s)	386, 1303, 1669
SchI	GAGTC	4 cut(s)	107, 158, 484, 2009
ScrFI	CCNGG	6 cut(s)	191, 271, 320, 746, 1886, 2106
SexAI	ACCWGGT	1 cut(s)	1884
SfaNI	GCATC	4 cut(s)	229, 1015, 2002, 2229
SfcI	CTRYAG	1 cut(s)	1029
SfoI	GGCGCC	1 cut(s)	324
Sfr303I	CCGCGG	1 cut(s)	674
SgrBI	CCGCGG	1 cut(s)	674
SinI	GGWCC	2 cut(s)	386, 1303
SmiMI	CAYNNNNRTG	2 cut(s)	1408, 2087
SmlI	CTYRAG	3 cut(s)	20, 524, 839
SmoI	CTYRAG	3 cut(s)	20, 524, 839
SphI	GCATGC	1 cut(s)	1960
SseBI	AGGCCT	1 cut(s)	1557
SspDI	GGCGCC	1 cut(s)	322
SspI	AATATT	1 cut(s)	1382
SspMI	CTAG	4 cut(s)	534, 957, 2058, 2210
StuI	AGGCCT	1 cut(s)	1557
StyD4I	CCNGG	6 cut(s)	189, 269, 318, 744, 1884, 2104
StyI	CCWWGG	1 cut(s)	1707
TaiI	ACGT	4 cut(s)	63, 289, 449, 1228
TaqI	TCGA	9 cut(s)	449, 464, 614, 625, 750, 1277, 1399, 1998, 2233
TaqII	GACCGA	1 cut(s)	1887
TauI	GCSGC	3 cut(s)	197, 501, 1674
TfiI	GAWTC	9 cut(s)	44, 379, 451, 611, 941, 998, 1169, 1441, 2135
Tru1I	TTAA	7 cut(s)	72, 330, 1284, 1446, 1851, 1968, 2069
Tru9I	TTAA	7 cut(s)	72, 330, 1284, 1446, 1851, 1968, 2069
TscAI	CASTG	5 cut(s)	691, 857, 918, 1929, 2270
TseFI	GTSAC	1 cut(s)	295
TseI	GCWGC	6 cut(s)	595, 739, 770, 812, 1028, 1454
Tsp45I	GTSAC	1 cut(s)	295
TspDTI	ATGAA	9 cut(s)	509, 812, 1029, 1062, 1374, 1422, 1842, 2105, 2196
TspGWI	ACGGA	4 cut(s)	399, 431, 530, 1058
TspRI	CASTG	5 cut(s)	691, 857, 918, 1929, 2270
VpaK11BI	GGWCC	2 cut(s)	386, 1303
XapI	RAATTY	8 cut(s)	974, 1631, 1661, 1712, 1728, 1847, 1994, 2191
XbaI	TCTAGA	1 cut(s)	956
XceI	RCATGY	3 cut(s)	174, 667, 1960
XmiI	GTMKAC	4 cut(s)	705, 722, 1329, 2303
XmnI	GAANNNNTTC	1 cut(s)	1731
XspI	CTAG	4 cut(s)	534, 957, 2058, 2210
Zsp2I	ATGCAT	1 cut(s)	1962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.