Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0006062

Physical Location & Seq

Genomic Coordinates Reverse (-)

55966289 .. 55974493

Gene Structure 8205 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG360900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

ATGCATCCCTTCTGCTGCATCTCCACCCTCTCCGAACACCACCACTCCCCCTCGCCGGACCTCCACGGCCGCACCCCAATGACCTCCTACGGTAGATCCGATCCGCATACCCGGTTCAGCGTCCACAAGGAGCCGAACAGCAACAATCACAGCAACCATTCCAGCGTCGATTACAGCCGCCTCAGCCAGCGGACGACGGCTGCTGCCGCCGCTGCCGCCATCGCGGCGGCCGAGGCTGTGGCGCGGCCTTCGACCGGAAGGGAGCAGCCGGTGGATGTCAAGATAAACGACATCGTCGGGAATGGCGTATCGGGAATATTGTTTAAGTGGGTGAATTACGGTAAAGGTTGGCGGCCGAGGTGGTTCGTTTTGCAGGATGGAGTTCTTTCGTATTATAAGATTCACGGACCTGATAGGATCGTCGTTACGCCGGACACGGAGAAAGGTTCTAAGGTCATCGGCGAAACGTCGAATCGGAGACTTTCGAGGCATAGGAGTCCCAATTCTCAACAGCTACGCCGCAAGCCCTTCGGCGAAGTTCATCTCAAGGTCTCTAGTATCCGTGAAAGCAAATCAGATGATAGGCGGTTCTCAATCTTCACCGGTACAAAGAGGCTGCATTTGAGGGCAGAATCGAGCGATGATCGACTCGCTTGGGTGGAAGCATTGCAGGCCGTGAAAGACATGTTTCCGCGGATTTCCAACAGTGAATTGATGGCTCCGGTAGACAATGTAGCGGTGTCTACTGAGAAATTGAGGCAGCGCCTGGTCGAAGAAGGTGTTAGGGAGGCAGCCATTCAGGAAAGTGAACAGATTATGAAGACAGAGTTTGCTGCATTGCATAACCAGCTTCTTCTGCTCAAGCAGAAACAGTGGCTCCTAATTGACACACTACGACAGTTAGAGACAGAAAAGGTAGATTTGGAGAATACAGTGGTTGATGAGAGCCGACAGCTCAAAGATTCTGGAGCTTCCTCTAGATCAAGACAAGACAAATTTAGTGAAGGAAGTGCAACTGAATCTGATGATGATAATGAAAGAGTTGATGCTGCAGAAGAAGAAACGGATGAAGAGGACAATGCCTTCTTTGATACGCGTGATTTTCTATCATCAAGTTCTTTCAAAAGTAATGGGTCTGATTATCGGATATCTTCCTTCTCTTCTGATGATGATGGCTTGTATGCCATTGAATCTGAAGATGGTACAGATCCAGCACTCAGAGCTGATTTTCCATTTGTCAAGCGACGTAAGAAATTGCCTGACCCTGTGGAGAAAGAGAAGTGTGTTAGTCTTTGGTCGATGATTAAGGACAACATTGGGAAGGACCTCACGAAAATCTGTCTCCCTGTATACTTCAATGAGCCTCTATCTTCTCTACAAAAATGTTTTGAGGATTTGGAATATTCATACCTCCTTGATCGAGCATATGAATGGGGCAAAAGGGGTAATAGCCTTATGAGGATTCTTAATGTGGCTGCTTTTGCTGTATCTGGATATGCTTCAACTGAAGGAAGGATGTGCAAACCGTTCAATCCATTATTAGGGGAAACATATGAGGCTGACTATCCAGATAAAGGCCTTCGGTTTTTCTCAGAGAAGGTTAGTCATCACCCCATGATTATTGCTTGCCATTGTGAGGGTAGAGGATGGAAATTCTATGGAGATAGCAATTTGAAAAGCAAATTCTGGGGCCGCTCAATTCAGCTTGATCCTGTTGGTGTTCTGACCTTGGAATTTGATGATGGTGAAATTCTTCAATGGAGTAAAGTTACAACTTCCATTTACAACCTCATATTAGGAAAGCTTTACTGTGATCACTACGGTACCATGCGAATACAGGGAAAGCATGAATATCAATGTAGGCTGAAATTTAAGGAGCAGTCTATCATTGACCGAAATCCTCACCAGGTACAAGGTATGGTTCAAGATAAGCATGGGAAAACAGTGGCAACGGTGTTTGGAAAATGGGATGAGAGCATGCATTATGTTAATGGAGACTGTTCAGGGAAGGGAAAATTCGAGTCTTTATCTGATGCCCGCCTGCTCTGGAAGAGGAGCAAGCCACCTAAGTTCCCTACTAGATATAACTTAACACGCTTTGCCATCACAATGAACGAACTCTTGCCTGGATTGAAGGAGAAGTTGCCCCCAACAGATTCAAGGCTTAGACCAGATCAAAGGTATCTGGAAAATGGGGAATATGAAATGGCAAATTCCGAGAAGTTGAGGCTAGAGCAGAGGCAACGGCAGGCTCGAAAGATGCAAGAAAGTGGTTGGAAACCGCAGTGGTTTGCAAAGGATAAAGCAAGTGATACTTACCGGTATACTGGCGGATATTGGGAGGCAAGAGAACGAAGAAATTGGGATGGTTGTCCCGATATATTTGGCCAAGTTCCTTCTGAACAACTTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Oxysterol_BP PH_11

Protein Analysis

804

Amino Acids

92.04

Weight (kDa)

7.09

Isoelectric Point (pI)

44.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH	PF00169	104 - 226	1.2e-11	PH domain
PH_11	PF15413	109 - 224	2.2e-14	Pleckstrin homology domain
Oxysterol_BP	PF01237	430 - 784	9.7e-132	Oxysterol-binding protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006062)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77730 AT2G31020 AT4G08180 AT4G08180 AT4G08180 AT4G08180
fragaria_vesca	FvH4_2g26250 FvH4_2g26250 FvH4_2g26250
malus_domestica	MD00G1220800.v1.1 MD08G1170000.v1.1 MD15G1357000.v1.1
prunus_persica	Prupe.1G504000_v2.0.a1 Prupe.1G504000_v2.0.a1
pyrus_communis	pycom08g14550 pycom15g31910
rosa_chinensis	RchiOBHm_Chr6g0294861
rosa_laevigata	RLG00000011836
rosa_multiflora	Rmu_co8074688.1_g000001 Rmu_sc0008966.1_g000015
rosa_roxburghii	Rroxscaffold_7G00172950
rosa_rugosa	Rorug06G0247200
rosa_samantha	Rh6AG360900 Rh6BG367500 Rh6CG374700 Rh6DG361400
rosa_wichuraiana	Rw6G031480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	396
Acc65I	GGTACC	1 cut(s)	1823
AccB1I	GGYRCC	1 cut(s)	1823
AccBSI	CCGCTC	1 cut(s)	1695
AccI	GTMKAC	4 cut(s)	726, 743, 1350, 2324
AccII	CGCG	4 cut(s)	224, 244, 694, 1096
AclWI	GGATC	5 cut(s)	90, 95, 425, 1202, 1703
AcoI	YGGCCR	4 cut(s)	67, 228, 353, 2386
AcsI	RAATTY	8 cut(s)	995, 1652, 1682, 1733, 1749, 1868, 2015, 2212
AcuI	CTGAAG	2 cut(s)	1215, 1527
AfaI	GTAC	4 cut(s)	607, 1204, 1825, 1911
AfiI	CCNNNNNNNGG	5 cut(s)	55, 254, 1541, 1574, 1636
AflIII	ACRYGT	2 cut(s)	684, 1094
AgeI	ACCGGT	2 cut(s)	602, 2319
AjnI	CCWGG	3 cut(s)	765, 1905, 2125
AluBI	AGCT	7 cut(s)	514, 850, 955, 971, 1223, 1705, 1804
AluI	AGCT	7 cut(s)	514, 850, 955, 971, 1223, 1705, 1804
Alw26I	GTCTC	5 cut(s)	472, 556, 899, 1346, 1989
AlwI	GGATC	5 cut(s)	90, 95, 425, 1202, 1703
AlwNI	CAGNNNCTG	1 cut(s)	766
AoxI	GGCC	8 cut(s)	67, 228, 245, 353, 672, 1576, 1690, 2386
ApoI	RAATTY	8 cut(s)	995, 1652, 1682, 1733, 1749, 1868, 2015, 2212
AsiGI	ACCGGT	2 cut(s)	602, 2319
Asp700I	GAANNNNTTC	1 cut(s)	1752
Asp718I	GGTACC	1 cut(s)	1823
AspLEI	GCGC	2 cut(s)	244, 765
AspS9I	GGNCC	4 cut(s)	58, 407, 1324, 1690
AsuC2I	CCSGG	1 cut(s)	112
AsuHPI	GGTGA	5 cut(s)	343, 592, 1601, 1757, 1895
AvaII	GGWCC	3 cut(s)	58, 407, 1324
BaeI	ACNNNNGTAYC	2 cut(s)	1807, 1840
BalI	TGGCCA	1 cut(s)	2388
BanI	GGYRCC	1 cut(s)	1823
BbsI	GAAGAC	1 cut(s)	827
BbvCI	CCTCAGC	1 cut(s)	182
BccI	CCATC	9 cut(s)	227, 371, 709, 1166, 1193, 1641, 1736, 2111, 2360
BceAI	ACGGC	4 cut(s)	82, 213, 659, 2261
BcgI	CGANNNNNNTGC	2 cut(s)	511, 545
BciT130I	CCWGG	3 cut(s)	767, 1907, 2127
BciVI	GTATCC	1 cut(s)	569
BclI	TGATCA	1 cut(s)	1813
BcnI	CCSGG	1 cut(s)	112
BcoDI	GTCTC	5 cut(s)	472, 556, 899, 1346, 1989
BfaI	CTAG	4 cut(s)	555, 978, 2079, 2231
BfmI	CTRYAG	1 cut(s)	1050
BfoI	RGCGCY	1 cut(s)	766
BfuI	GTATCC	1 cut(s)	569
BglI	GCCNNNNNGGC	1 cut(s)	224
Bme1390I	CCNGG	4 cut(s)	112, 767, 1907, 2127
Bme18I	GGWCC	3 cut(s)	58, 407, 1324
BmgT120I	GGNCC	4 cut(s)	58, 407, 1324, 1690
BmiI	GGNNCC	5 cut(s)	132, 720, 878, 1691, 1825
BmrFI	CCNGG	4 cut(s)	112, 767, 1907, 2127
BmsI	GCATC	5 cut(s)	13, 27, 1036, 2023, 2250
BpiI	GAAGAC	1 cut(s)	827
BpmI	CTGGAG	1 cut(s)	987
Bpu10I	CCTNAGC	1 cut(s)	182
BpuEI	CTTGAG	2 cut(s)	530, 845
BpuMI	CCSGG	1 cut(s)	112
BsaI	GGTCTC	1 cut(s)	556
BsaJI	CCNNGG	5 cut(s)	64, 231, 356, 692, 1728
BsaWI	WCCGGW	4 cut(s)	254, 602, 721, 2319
BsaXI	ACNNNNNCTCC	4 cut(s)	29, 59, 861, 891
Bsc4I	CCNNNNNNNGG	5 cut(s)	55, 254, 1541, 1574, 1636
Bse118I	RCCGGY	3 cut(s)	268, 602, 2319
Bse1I	ACTGG	1 cut(s)	2332
Bse3DI	GCAATG	2 cut(s)	665, 836
BseBI	CCWGG	3 cut(s)	767, 1907, 2127
BseDI	CCNNGG	5 cut(s)	64, 231, 356, 692, 1728
BseGI	GGATG	8 cut(s)	4, 280, 382, 1072, 1521, 1652, 1975, 2371
BseLI	CCNNNNNNNGG	5 cut(s)	55, 254, 1541, 1574, 1636
BseMI	GCAATG	2 cut(s)	665, 836
BseMII	CTCAG	4 cut(s)	196, 738, 1231, 1605
BseNI	ACTGG	1 cut(s)	2332
BseRI	GAGGAG	1 cut(s)	2068
BseX3I	CGGCCG	3 cut(s)	67, 228, 353
Bsh1236I	CGCG	4 cut(s)	224, 244, 694, 1096
Bsh1285I	CGRYCG	4 cut(s)	70, 231, 255, 356
BshFI	GGCC	8 cut(s)	69, 230, 247, 355, 674, 1578, 1692, 2388
BshNI	GGYRCC	1 cut(s)	1823
BshTI	ACCGGT	2 cut(s)	602, 2319
BsiEI	CGRYCG	4 cut(s)	70, 231, 255, 356
BsiSI	CCGG	8 cut(s)	56, 112, 255, 269, 431, 603, 722, 2320
BslFI	GGGAC	2 cut(s)	483, 2358
BslI	CCNNNNNNNGG	5 cut(s)	55, 254, 1541, 1574, 1636
BsmAI	GTCTC	5 cut(s)	472, 556, 899, 1346, 1989
BsmFI	GGGAC	2 cut(s)	483, 2358
BsnI	GGCC	8 cut(s)	69, 230, 247, 355, 674, 1578, 1692, 2388
Bso31I	GGTCTC	1 cut(s)	556
BspANI	GGCC	8 cut(s)	69, 230, 247, 355, 674, 1578, 1692, 2388
BspCNI	CTCAG	4 cut(s)	195, 739, 1230, 1604
BspFNI	CGCG	4 cut(s)	224, 244, 694, 1096
BspLI	GGNNCC	5 cut(s)	132, 720, 878, 1691, 1825
BspMAI	CTGCAG	1 cut(s)	1054
BspPI	GGATC	5 cut(s)	90, 95, 425, 1202, 1703
BspT107I	GGYRCC	1 cut(s)	1823
BspTNI	GGTCTC	1 cut(s)	556
BsrBI	CCGCTC	1 cut(s)	1695
BsrDI	GCAATG	2 cut(s)	665, 836
BsrFI	RCCGGY	3 cut(s)	268, 602, 2319
BsrI	ACTGG	1 cut(s)	2332
BssAI	RCCGGY	3 cut(s)	268, 602, 2319
BssECI	CCNNGG	5 cut(s)	64, 231, 356, 692, 1728
BssNAI	GTATAC	2 cut(s)	1351, 2325
BssT1I	CCWWGG	1 cut(s)	1728
Bst1107I	GTATAC	2 cut(s)	1351, 2325
Bst2UI	CCWGG	3 cut(s)	767, 1907, 2127
Bst6I	CTCTTC	3 cut(s)	1065, 1165, 2045
BstC8I	GCNNGC	9 cut(s)	188, 524, 672, 1627, 1979, 2038, 2042, 2060, 2250
BstDEI	CTNAG	7 cut(s)	182, 450, 747, 1217, 1591, 2067, 2165
BstDSI	CCRYGG	2 cut(s)	64, 692
BstF5I	GGATG	8 cut(s)	4, 280, 382, 1072, 1521, 1652, 1975, 2371
BstFNI	CGCG	4 cut(s)	224, 244, 694, 1096
BstH2I	RGCGCY	1 cut(s)	766
BstHHI	GCGC	2 cut(s)	244, 765
BstMAI	GTCTC	5 cut(s)	472, 556, 899, 1346, 1989
BstMCI	CGRYCG	4 cut(s)	70, 231, 255, 356
BstNI	CCWGG	3 cut(s)	767, 1907, 2127
BstNSI	RCATGY	2 cut(s)	688, 1981
BstSCI	CCNGG	4 cut(s)	110, 765, 1905, 2125
BstSFI	CTRYAG	1 cut(s)	1050
BstUI	CGCG	4 cut(s)	224, 244, 694, 1096
BstV2I	GAAGAC	1 cut(s)	827
BstX2I	RGATCY	2 cut(s)	95, 1207
BstYI	RGATCY	2 cut(s)	95, 1207
BstZ17I	GTATAC	2 cut(s)	1351, 2325
BstZI	CGGCCG	3 cut(s)	67, 228, 353
BsuI	GTATCC	1 cut(s)	569
BsuRI	GGCC	8 cut(s)	69, 230, 247, 355, 674, 1578, 1692, 2388
BtgI	CCRYGG	2 cut(s)	64, 692
BtgZI	GCGATG	2 cut(s)	205, 654
BtsCI	GGATG	8 cut(s)	4, 280, 382, 1072, 1521, 1652, 1975, 2371
BtsI	GCAGTG	1 cut(s)	2291
BtsIMutI	CAGTG	5 cut(s)	712, 878, 939, 1950, 2291
Cac8I	GCNNGC	9 cut(s)	188, 524, 672, 1627, 1979, 2038, 2042, 2060, 2250
CaiI	CAGNNNCTG	1 cut(s)	766
CfoI	GCGC	2 cut(s)	244, 765
Cfr10I	RCCGGY	3 cut(s)	268, 602, 2319
Cfr13I	GGNCC	4 cut(s)	58, 407, 1324, 1690
Cfr42I	CCGCGG	1 cut(s)	695
CseI	GACGC	2 cut(s)	109, 154
CsiI	ACCWGGT	1 cut(s)	1905
Csp6I	GTAC	4 cut(s)	606, 1203, 1824, 1910
CspAI	ACCGGT	2 cut(s)	602, 2319
CviAII	CATG	6 cut(s)	685, 1615, 1828, 1847, 1934, 1978
CviQI	GTAC	4 cut(s)	606, 1203, 1824, 1910
DdeI	CTNAG	7 cut(s)	182, 450, 747, 1217, 1591, 2067, 2165
EaeI	YGGCCR	4 cut(s)	67, 228, 353, 2386
EagI	CGGCCG	3 cut(s)	67, 228, 353
Eam1104I	CTCTTC	3 cut(s)	1065, 1165, 2045
EarI	CTCTTC	3 cut(s)	1065, 1165, 2045
EciI	GGCGGA	1 cut(s)	2346
EclXI	CGGCCG	3 cut(s)	67, 228, 353
Eco130I	CCWWGG	1 cut(s)	1728
Eco147I	AGGCCT	1 cut(s)	1578
Eco31I	GGTCTC	1 cut(s)	556
Eco32I	GATATC	1 cut(s)	1149
Eco47I	GGWCC	3 cut(s)	58, 407, 1324
Eco52I	CGGCCG	3 cut(s)	67, 228, 353
Eco57I	CTGAAG	2 cut(s)	1215, 1527
EcoO109I	RGGNCCY	1 cut(s)	1324
EcoRII	CCWGG	3 cut(s)	765, 1905, 2125
EcoRV	GATATC	1 cut(s)	1149
EcoT14I	CCWWGG	1 cut(s)	1728
EcoT22I	ATGCAT	2 cut(s)	6, 1983
ErhI	CCWWGG	1 cut(s)	1728
FaeI	CATG	6 cut(s)	688, 1618, 1831, 1850, 1937, 1981
FalI	AAGNNNNNCTT	2 cut(s)	2299, 2331
FaqI	GGGAC	2 cut(s)	483, 2358
FatI	CATG	6 cut(s)	684, 1614, 1827, 1846, 1933, 1977
FauI	CCCGC	1 cut(s)	2045
FauNDI	CATATG	2 cut(s)	1426, 1552
FbaI	TGATCA	1 cut(s)	1813
FblI	GTMKAC	4 cut(s)	726, 743, 1350, 2324
FokI	GGATG	7 cut(s)	287, 389, 1079, 1528, 1659, 1982, 2378
FspBI	CTAG	4 cut(s)	555, 978, 2079, 2231
GlaI	GCGC	2 cut(s)	243, 764
GsuI	CTGGAG	1 cut(s)	987
HaeII	RGCGCY	1 cut(s)	766
HaeIII	GGCC	8 cut(s)	69, 230, 247, 355, 674, 1578, 1692, 2388
HapII	CCGG	8 cut(s)	56, 112, 255, 269, 431, 603, 722, 2320
HgaI	GACGC	2 cut(s)	109, 154
HhaI	GCGC	2 cut(s)	244, 765
Hin1II	CATG	6 cut(s)	688, 1618, 1831, 1850, 1937, 1981
Hin6I	GCGC	2 cut(s)	242, 763
HinP1I	GCGC	2 cut(s)	242, 763
HindIII	AAGCTT	1 cut(s)	1802
HpaII	CCGG	8 cut(s)	56, 112, 255, 269, 431, 603, 722, 2320
HphI	GGTGA	5 cut(s)	343, 592, 1601, 1757, 1895
Hpy166II	GTNNAC	6 cut(s)	124, 727, 744, 809, 1351, 2325
Hpy8I	GTNNAC	6 cut(s)	124, 727, 744, 809, 1351, 2325
Hpy99I	CGWCG	6 cut(s)	170, 199, 299, 425, 472, 1248
HpyCH4IV	ACGT	2 cut(s)	467, 1246
HpyF3I	CTNAG	7 cut(s)	182, 450, 747, 1217, 1591, 2067, 2165
HpySE526I	ACGT	2 cut(s)	467, 1246
Hsp92II	CATG	6 cut(s)	688, 1618, 1831, 1850, 1937, 1981
HspAI	GCGC	2 cut(s)	242, 763
KpnI	GGTACC	1 cut(s)	1827
Ksp22I	TGATCA	1 cut(s)	1813
KspI	CCGCGG	1 cut(s)	695
LmnI	GCTCC	7 cut(s)	130, 262, 724, 882, 968, 1876, 2055
LweI	GCATC	5 cut(s)	13, 27, 1036, 2023, 2250
MabI	ACCWGGT	1 cut(s)	1905
MaeI	CTAG	4 cut(s)	555, 978, 2079, 2231
MaeII	ACGT	2 cut(s)	467, 1246
MaeIII	GTNAC	2 cut(s)	424, 1768
MbiI	CCGCTC	1 cut(s)	1695
MflI	RGATCY	2 cut(s)	95, 1207
MlsI	TGGCCA	1 cut(s)	2388
MluI	ACGCGT	1 cut(s)	1094
MluNI	TGGCCA	1 cut(s)	2388
MlyI	GAGTC	3 cut(s)	505, 642, 2030
MmeI	TCCRAC	2 cut(s)	726, 2255
Mox20I	TGGCCA	1 cut(s)	2388
Mph1103I	ATGCAT	2 cut(s)	6, 1983
MroXI	GAANNNNTTC	1 cut(s)	1752
MscI	TGGCCA	1 cut(s)	2388
MseI	TTAA	6 cut(s)	324, 1305, 1467, 1872, 1989, 2090
MslI	CAYNNNNRTG	3 cut(s)	77, 1429, 2108
Msp20I	TGGCCA	1 cut(s)	2388
MspA1I	CMGCKG	3 cut(s)	190, 212, 694
MspI	CCGG	8 cut(s)	56, 112, 255, 269, 431, 603, 722, 2320
MspR9I	CCNGG	4 cut(s)	112, 767, 1907, 2127
MvaI	CCWGG	3 cut(s)	767, 1907, 2127
MvnI	CGCG	4 cut(s)	224, 244, 694, 1096
NciI	CCSGG	1 cut(s)	112
NdeI	CATATG	2 cut(s)	1426, 1552
NlaIII	CATG	6 cut(s)	688, 1618, 1831, 1850, 1937, 1981
NlaIV	GGNNCC	5 cut(s)	132, 720, 878, 1691, 1825
NmeAIII	GCCGAG	2 cut(s)	256, 381
NsiI	ATGCAT	2 cut(s)	6, 1983
NspI	RCATGY	2 cut(s)	688, 1981
PaeI	GCATGC	1 cut(s)	1981
PceI	AGGCCT	1 cut(s)	1578
PciI	ACATGT	1 cut(s)	684
PcsI	WCGNNNNNNNCGW	4 cut(s)	96, 228, 303, 2251
PdmI	GAANNNNTTC	1 cut(s)	1752
PfeI	GAWTC	8 cut(s)	400, 472, 632, 962, 1019, 1190, 1462, 2156
PflFI	GACNNNGTC	1 cut(s)	293
PinAI	ACCGGT	2 cut(s)	602, 2319
PleI	GAGTC	3 cut(s)	504, 642, 2029
PpsI	GAGTC	3 cut(s)	504, 642, 2029
PpuMI	RGGWCCY	1 cut(s)	1324
PscI	ACATGT	1 cut(s)	684
PsiI	TTATAA	1 cut(s)	396
Psp5II	RGGWCCY	1 cut(s)	1324
Psp6I	CCWGG	3 cut(s)	765, 1905, 2125
PspGI	CCWGG	3 cut(s)	765, 1905, 2125
PspN4I	GGNNCC	5 cut(s)	132, 720, 878, 1691, 1825
PspPI	GGNCC	4 cut(s)	58, 407, 1324, 1690
PspPPI	RGGWCCY	1 cut(s)	1324
PstI	CTGCAG	1 cut(s)	1054
PstNI	CAGNNNCTG	1 cut(s)	766
PsuI	RGATCY	2 cut(s)	95, 1207
PsyI	GACNNNGTC	1 cut(s)	293
RsaI	GTAC	4 cut(s)	607, 1204, 1825, 1911
RsaNI	GTAC	4 cut(s)	606, 1203, 1824, 1910
RseI	CAYNNNNRTG	3 cut(s)	77, 1429, 2108
SacII	CCGCGG	1 cut(s)	695
SaqAI	TTAA	6 cut(s)	324, 1305, 1467, 1872, 1989, 2090
Sau96I	GGNCC	4 cut(s)	58, 407, 1324, 1690
SchI	GAGTC	3 cut(s)	505, 642, 2030
ScrFI	CCNGG	4 cut(s)	112, 767, 1907, 2127
SexAI	ACCWGGT	1 cut(s)	1905
SfaNI	GCATC	5 cut(s)	13, 27, 1036, 2023, 2250
SfcI	CTRYAG	1 cut(s)	1050
Sfr303I	CCGCGG	1 cut(s)	695
SgrBI	CCGCGG	1 cut(s)	695
SinI	GGWCC	3 cut(s)	58, 407, 1324
SmiMI	CAYNNNNRTG	3 cut(s)	77, 1429, 2108
SmlI	CTYRAG	2 cut(s)	545, 860
SmoI	CTYRAG	2 cut(s)	545, 860
SphI	GCATGC	1 cut(s)	1981
SseBI	AGGCCT	1 cut(s)	1578
SspI	AATATT	2 cut(s)	318, 1403
SspMI	CTAG	4 cut(s)	555, 978, 2079, 2231
StuI	AGGCCT	1 cut(s)	1578
StyD4I	CCNGG	4 cut(s)	110, 765, 1905, 2125
StyI	CCWWGG	1 cut(s)	1728
TaiI	ACGT	2 cut(s)	470, 1249
TaqII	GACCGA	1 cut(s)	1908
TfiI	GAWTC	8 cut(s)	400, 472, 632, 962, 1019, 1190, 1462, 2156
Tru1I	TTAA	6 cut(s)	324, 1305, 1467, 1872, 1989, 2090
Tru9I	TTAA	6 cut(s)	324, 1305, 1467, 1872, 1989, 2090
TscAI	CASTG	5 cut(s)	712, 878, 939, 1950, 2291
TspDTI	ATGAA	9 cut(s)	530, 833, 1050, 1083, 1395, 1443, 1863, 2126, 2217
TspGWI	ACGGA	4 cut(s)	420, 452, 551, 1079
TspRI	CASTG	5 cut(s)	712, 878, 939, 1950, 2291
Tth111I	GACNNNGTC	1 cut(s)	293
VpaK11BI	GGWCC	3 cut(s)	58, 407, 1324
XapI	RAATTY	8 cut(s)	995, 1652, 1682, 1733, 1749, 1868, 2015, 2212
XbaI	TCTAGA	1 cut(s)	977
XceI	RCATGY	2 cut(s)	688, 1981
XmiI	GTMKAC	4 cut(s)	726, 743, 1350, 2324
XmnI	GAANNNNTTC	1 cut(s)	1752
XspI	CTAG	4 cut(s)	555, 978, 2079, 2231
Zsp2I	ATGCAT	2 cut(s)	6, 1983

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.