Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0006821

Physical Location & Seq

Genomic Coordinates Forward (+)

21564536 .. 21569138

Gene Structure 4603 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g27000.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGTTGAGCCTGTCAGCTTCAAACGCCATGAGCATAGTTGCCACAGCTGCAGCTCTATCTTTGCCTATCTCCTTTTGCAGATCATCCAAGCTTAGCACCAAGAAGGGTGTGAGAGGATTTCGGGTTTTCGCTGTGTTGGGAGAGGAATCGGGGGTAGATAAGAAGAATGCTTGGAGCTCACTCTTTGATGTGGAGGATCCAAGGCCTAAAAATCCAAAATTAGAAGGGAAGGTCTTGAAGGCAGCTCAGGCCTTGGAAGTTGCTAGATTTGATATACAATATTGTGATTGGCGTGCTCGACAAGATGTGCTAACAATCATGCTCCTCCATGAAAAGTTGGAGGTTCACTGGCTTTTAAGTTTAAAAGTGGGATTCTTAAATGTGGCTGTGCAGGTTGTGGAAGTTCTAAATCCTCTAGCCCGTGAGTATAAGTCTATCGGCACCATGAAGAAGGAGCTTGCAGAGTTGCAAGAAGAACTAGGACAGGCTCACAAAGAGGTTCATATATCTGAAGCAAGAGTTTCTAGTGCTTTAGATAAATTGGCTTTCATGGAAGAATTGGTGAATGATAAGCTGTTACAGGACAGGAACACTACTGATGCTGAGCAAGCATCCCCTTCTCCCAGTACTTCTACGCAATCTTTGGATGCTGTAAAAAGGAGGAGGTCTCGGAAACGCTTGGATGTTTCAGGTCCGGTTCAAAAGTACCATCCCCGGTTGAAGAATTTTTGGTACCCTGTTGCCTTCTCCACTAACCTTAAGGATGATACCATGGTTCCAATTGATTGTTTTGAGGAACCATGGGTTCTCTTTCGTGGAAAAGATGGGAAACCCGGATGTGTTCAGAATACGTGTGCACATAGAGCTTGCCCTCTTGATCTCGGTACAGTAAAAGACGGTCGTATTACATGTCCATATCACGGATGGGAGTACTCAACTGATGGAAAATGTGAGAAGATGCCATCCACAAAATTACGCAATGTGAAGATCAAGTCGCTGCCGTGTTTTGAGCAAGATGGGATGTTATGGATTTGGCCCGGTGATGACCCTCCATCAGCTACTATTCCTTCTTTACAACCACCTGAAGGATTTCTAGTCCATGCTGAGCTGGTAATAGAACTCCCAGTGGAACATGGATTACTTCTTGACAATCTTTTAGATCTTGCGCATGCTCCTTTTACTCATACGTCCACCTTTGCCAAGGGATGGAGCGTTCCAAGCTTTGTGAAATTTTTGACGCCTGCATCCGGCCTGCAAGGGTATTGGGACCCTTACCCTATCGATATGGAATTTCGACCACCTTGTATGGTACTCTCAACCATTGGGATCTCAAAGCCTGGAAAACTAGAAGGGCAGAGTACAAAGCAGTGCAGCACACATCTTCATCAACTTCATGTGTGCTTACCCTCTTCTAGAAACAAAACAAGGTTACTATACAGAATGTCACTGGATTTTGCGCCCGTGCTGAAGCACATTCCTTTCATGCACGTTTTATGGAGGCATTTCGCTGAACAGGTTTTGAATGAGGATCTAAGGCTTGTCCTCGGCCAACAAGAGCGCATGAACTGCGGGGAGAATGTCTGGAGTTGTCCCGTAACATACGACAAGCTAGGAGTGAGGTACAGGCTATGGAGGGAGGCTGTTGAACAAGGAATCAAGCAACTACCTTTCACAACCAAATCAGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006779 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009706 GO:0009941 GO:0009987 GO:0010277 GO:0015994 GO:0015995 GO:0016020 GO:0016491 GO:0016701 GO:0016703 GO:0018130 GO:0019438 GO:0019866 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0033013 GO:0033014 GO:0034357 GO:0034641 GO:0042170 GO:0042440 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046148 GO:0046483 GO:0051186 GO:0051188 GO:0055035 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00860 ko01100 ko01110 map00860 map01100 map01110

Pfam Domains

Protein Families

PaO Rieske

Protein Analysis

563

Amino Acids

63.4

Weight (kDa)

8.52

Isoelectric Point (pI)

45.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rieske	PF00355	61 - 141	1.4e-25	Rieske [2Fe-2S] domain
VanA_C	PF19112	245 - 364	3.4e-07	Vanillate O-demethylase oxygenase C-terminal domain
PaO	PF08417	248 - 343	2.7e-18	Pheophorbide a oxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44446 AT1G44446 AT1G44446 AT1G44446
fragaria_vesca	FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000
malus_domestica	MD08G1162200.v1.1 MD15G1347600.v1.1
prunus_persica	Prupe.1G495400_v2.0.a1
pyrus_communis	pycom08g14010 pycom15g31160
rosa_chinensis	RchiOBHm_Chr6g0295881
rosa_laevigata	RLG00000011760
rosa_multiflora	Rmu_sc0003139.1_g000003
rosa_roxburghii	Rroxscaffold_7G00172090
rosa_rugosa	Rorug06G0255000
rosa_samantha	Rh6AG368500 Rh6BG376300 Rh6CG382400 Rh6DG369000
rosa_wichuraiana	Rw6G032130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1167
Acc36I	ACCTGC	1 cut(s)	382
Acc65I	GGTACC	1 cut(s)	732
AccB1I	GGYRCC	2 cut(s)	440, 732
AccB7I	CCANNNNNTGG	1 cut(s)	1206
AciI	CCGC	1 cut(s)	1569
AclWI	GGATC	4 cut(s)	191, 204, 1334, 1536
AcoI	YGGCCR	1 cut(s)	1546
AcsI	RAATTY	3 cut(s)	724, 1229, 1289
AcuI	CTGAAG	3 cut(s)	531, 1104, 1487
AcyI	GRCGYC	1 cut(s)	1238
AfaI	GTAC	8 cut(s)	628, 707, 734, 886, 932, 1311, 1360, 1622
AfiI	CCNNNNNNNGG	4 cut(s)	920, 1085, 1206, 1247
AflII	CTTAAG	1 cut(s)	758
AflIII	ACRYGT	2 cut(s)	851, 908
AgsI	TTSAA	6 cut(s)	21, 238, 701, 721, 1522, 1646
AjnI	CCWGG	1 cut(s)	1336
AloI	GAACNNNNNNTCC	2 cut(s)	1197, 1229
Alw21I	GWGCWC	3 cut(s)	179, 298, 859
Alw26I	GTCTC	1 cut(s)	672
Alw44I	GTGCAC	1 cut(s)	855
AlwI	GGATC	4 cut(s)	191, 204, 1334, 1536
AoxI	GGCC	5 cut(s)	203, 249, 1034, 1249, 1546
ApaLI	GTGCAC	1 cut(s)	855
ApeKI	GCWGC	5 cut(s)	47, 50, 242, 997, 1371
ApoI	RAATTY	3 cut(s)	724, 1229, 1289
Asp700I	GAANNNNTTC	1 cut(s)	1089
Asp718I	GGTACC	1 cut(s)	732
AspLEI	GCGC	3 cut(s)	1168, 1459, 1560
AspS9I	GGNCC	3 cut(s)	692, 1035, 1267
AsuC2I	CCSGG	3 cut(s)	715, 834, 1038
AsuHPI	GGTGA	2 cut(s)	574, 1052
AvaII	GGWCC	2 cut(s)	692, 1267
BaeGI	GKGCMC	1 cut(s)	859
BaeI	ACNNNNGTAYC	2 cut(s)	759, 792
BamHI	GGATCC	1 cut(s)	196
BanI	GGYRCC	2 cut(s)	440, 732
BanII	GRGCYC	1 cut(s)	179
Bbv12I	GWGCWC	3 cut(s)	179, 298, 859
BbvI	GCAGC	5 cut(s)	34, 62, 254, 984, 1383
BccI	CCATC	8 cut(s)	717, 818, 918, 935, 970, 1010, 1060, 1200
BceAI	ACGGC	1 cut(s)	985
BciT130I	CCWGG	1 cut(s)	1338
BcnI	CCSGG	3 cut(s)	715, 834, 1038
BcoDI	GTCTC	1 cut(s)	672
BfaI	CTAG	9 cut(s)	264, 416, 479, 525, 1094, 1346, 1413, 1610, 1687
BfmI	CTRYAG	1 cut(s)	48
BfrI	CTTAAG	1 cut(s)	758
BfuAI	ACCTGC	1 cut(s)	382
BglII	AGATCT	1 cut(s)	1159
BisI	GCNGC	5 cut(s)	48, 51, 243, 998, 1372
BlpI	GCTNAGC	3 cut(s)	92, 603, 1104
BlsI	GCNGC	5 cut(s)	49, 52, 244, 999, 1373
BmcAI	AGTACT	2 cut(s)	628, 932
Bme1390I	CCNGG	4 cut(s)	715, 834, 1038, 1338
Bme18I	GGWCC	2 cut(s)	692, 1267
BmgT120I	GGNCC	3 cut(s)	692, 1035, 1267
BmiI	GGNNCC	7 cut(s)	198, 442, 734, 777, 798, 1268, 1269
BmrFI	CCNGG	4 cut(s)	715, 834, 1038, 1338
BmrI	ACTGGG	2 cut(s)	618, 1118
BmsI	GCATC	5 cut(s)	589, 620, 637, 948, 1253
BmuI	ACTGGG	2 cut(s)	618, 1118
BplI	GAGNNNNNCTC	2 cut(s)	652, 684
BpmI	CTGGAG	1 cut(s)	1603
Bpu10I	CCTNAGC	1 cut(s)	246
Bpu1102I	GCTNAGC	3 cut(s)	92, 603, 1104
BpuMI	CCSGG	3 cut(s)	715, 834, 1038
Bsa29I	ATCGAT	1 cut(s)	1281
BsaAI	YACGTR	1 cut(s)	852
BsaHI	GRCGYC	1 cut(s)	1238
BsaI	GGTCTC	1 cut(s)	672
BsaJI	CCNNGG	7 cut(s)	200, 252, 713, 771, 800, 1200, 1543
BsaWI	WCCGGW	1 cut(s)	694
Bsc4I	CCNNNNNNNGG	4 cut(s)	920, 1085, 1206, 1247
Bse1I	ACTGG	4 cut(s)	353, 624, 1124, 1452
Bse3DI	GCAATG	1 cut(s)	985
BseBI	CCWGG	1 cut(s)	1338
BseCI	ATCGAT	1 cut(s)	1281
BseDI	CCNNGG	7 cut(s)	200, 252, 713, 771, 800, 1200, 1543
BseLI	CCNNNNNNNGG	4 cut(s)	920, 1085, 1206, 1247
BseMI	GCAATG	1 cut(s)	985
BseMII	CTCAG	3 cut(s)	260, 594, 1095
BseNI	ACTGG	4 cut(s)	353, 624, 1124, 1452
BseRI	GAGGAG	2 cut(s)	314, 676
BseSI	GKGCMC	1 cut(s)	859
BseXI	GCAGC	5 cut(s)	34, 62, 254, 984, 1383
BsgI	GTGCAG	2 cut(s)	410, 1390
Bsh1285I	CGRYCG	1 cut(s)	901
BshFI	GGCC	5 cut(s)	205, 251, 1036, 1251, 1548
BshNI	GGYRCC	2 cut(s)	440, 732
BshVI	ATCGAT	1 cut(s)	1281
BsiEI	CGRYCG	1 cut(s)	901
BsiHKAI	GWGCWC	3 cut(s)	179, 298, 859
BsiSI	CCGG	5 cut(s)	695, 715, 834, 1038, 1248
BslFI	GGGAC	2 cut(s)	1280, 1575
BslI	CCNNNNNNNGG	4 cut(s)	920, 1085, 1206, 1247
BsmAI	GTCTC	1 cut(s)	672
BsmFI	GGGAC	2 cut(s)	1280, 1575
BsmI	GAATGC	1 cut(s)	172
BsnI	GGCC	5 cut(s)	205, 251, 1036, 1251, 1548
Bso31I	GGTCTC	1 cut(s)	672
Bsp1286I	GDGCHC	3 cut(s)	179, 298, 859
Bsp143I	GATC	7 cut(s)	80, 196, 877, 987, 1159, 1326, 1528
Bsp1720I	GCTNAGC	3 cut(s)	92, 603, 1104
Bsp19I	CCATGG	2 cut(s)	771, 800
BspACI	CCGC	1 cut(s)	1569
BspANI	GGCC	5 cut(s)	205, 251, 1036, 1251, 1548
BspCNI	CTCAG	3 cut(s)	259, 595, 1096
BspDI	ATCGAT	1 cut(s)	1281
BspLI	GGNNCC	7 cut(s)	198, 442, 734, 777, 798, 1268, 1269
BspMAI	CTGCAG	1 cut(s)	52
BspMI	ACCTGC	1 cut(s)	382
BspPI	GGATC	4 cut(s)	191, 204, 1334, 1536
BspT107I	GGYRCC	2 cut(s)	440, 732
BspTI	CTTAAG	1 cut(s)	758
BspTNI	GGTCTC	1 cut(s)	672
BsrDI	GCAATG	1 cut(s)	985
BsrI	ACTGG	4 cut(s)	353, 624, 1124, 1452
BssECI	CCNNGG	7 cut(s)	200, 252, 713, 771, 800, 1200, 1543
BssMI	GATC	7 cut(s)	80, 196, 877, 987, 1159, 1326, 1528
BssNI	GRCGYC	1 cut(s)	1238
BssT1I	CCWWGG	5 cut(s)	200, 252, 771, 800, 1200
Bst2UI	CCWGG	1 cut(s)	1338
Bst4CI	ACNGT	2 cut(s)	889, 899
Bst6I	CTCTTC	1 cut(s)	1414
BstACI	GRCGYC	1 cut(s)	1238
BstAFI	CTTAAG	1 cut(s)	758
BstAPI	GCANNNNNTGC	1 cut(s)	1566
BstBAI	YACGTR	1 cut(s)	852
BstC8I	GCNNGC	7 cut(s)	294, 459, 609, 868, 1170, 1242, 1253
BstDEI	CTNAG	5 cut(s)	92, 246, 603, 1104, 1532
BstDSI	CCRYGG	2 cut(s)	771, 800
BstHHI	GCGC	3 cut(s)	1168, 1459, 1560
BstKTI	GATC	7 cut(s)	83, 199, 880, 990, 1162, 1329, 1531
BstMAI	GTCTC	1 cut(s)	672
BstMBI	GATC	7 cut(s)	80, 196, 877, 987, 1159, 1326, 1528
BstMCI	CGRYCG	1 cut(s)	901
BstMWI	GCNNNNNNNGC	7 cut(s)	23, 47, 248, 608, 863, 1218, 1566
BstNI	CCWGG	1 cut(s)	1338
BstNSI	RCATGY	2 cut(s)	912, 1172
BstSCI	CCNGG	4 cut(s)	713, 832, 1036, 1336
BstSFI	CTRYAG	1 cut(s)	48
BstSLI	GKGCMC	1 cut(s)	859
BstV1I	GCAGC	5 cut(s)	34, 62, 254, 984, 1383
BstX2I	RGATCY	4 cut(s)	196, 1159, 1326, 1528
BstYI	RGATCY	4 cut(s)	196, 1159, 1326, 1528
Bsu15I	ATCGAT	1 cut(s)	1281
BsuRI	GGCC	5 cut(s)	205, 251, 1036, 1251, 1548
BsuTUI	ATCGAT	1 cut(s)	1281
BtgI	CCRYGG	2 cut(s)	771, 800
BtsI	GCAGTG	1 cut(s)	1373
BtsIMutI	CAGTG	4 cut(s)	346, 1131, 1373, 1445
BveI	ACCTGC	1 cut(s)	382
Cac8I	GCNNGC	7 cut(s)	294, 459, 609, 868, 1170, 1242, 1253
CfoI	GCGC	3 cut(s)	1168, 1459, 1560
Cfr13I	GGNCC	3 cut(s)	692, 1035, 1267
ClaI	ATCGAT	1 cut(s)	1281
CseI	GACGC	1 cut(s)	1246
Csp6I	GTAC	8 cut(s)	627, 706, 733, 885, 931, 1310, 1359, 1621
CviQI	GTAC	8 cut(s)	627, 706, 733, 885, 931, 1310, 1359, 1621
DdeI	CTNAG	5 cut(s)	92, 246, 603, 1104, 1532
DpnI	GATC	7 cut(s)	82, 198, 879, 989, 1161, 1328, 1530
DpnII	GATC	7 cut(s)	80, 196, 877, 987, 1159, 1326, 1528
DraI	TTTAAA	1 cut(s)	363
EaeI	YGGCCR	1 cut(s)	1546
Eam1104I	CTCTTC	1 cut(s)	1414
EarI	CTCTTC	1 cut(s)	1414
Ecl136II	GAGCTC	1 cut(s)	177
Eco130I	CCWWGG	5 cut(s)	200, 252, 771, 800, 1200
Eco147I	AGGCCT	2 cut(s)	205, 251
Eco24I	GRGCYC	1 cut(s)	179
Eco31I	GGTCTC	1 cut(s)	672
Eco47I	GGWCC	2 cut(s)	692, 1267
Eco53kI	GAGCTC	1 cut(s)	177
Eco57I	CTGAAG	3 cut(s)	531, 1104, 1487
EcoICRI	GAGCTC	1 cut(s)	177
EcoO109I	RGGNCCY	1 cut(s)	1267
EcoRII	CCWGG	1 cut(s)	1336
EcoT14I	CCWWGG	5 cut(s)	200, 252, 771, 800, 1200
EcoT38I	GRGCYC	1 cut(s)	179
ErhI	CCWWGG	5 cut(s)	200, 252, 771, 800, 1200
FaqI	GGGAC	2 cut(s)	1280, 1575
FauI	CCCGC	1 cut(s)	1562
Fnu4HI	GCNGC	5 cut(s)	48, 51, 243, 998, 1372
FriOI	GRGCYC	1 cut(s)	179
Fsp4HI	GCNGC	5 cut(s)	48, 51, 243, 998, 1372
FspBI	CTAG	9 cut(s)	264, 416, 479, 525, 1094, 1346, 1413, 1610, 1687
FspI	TGCGCA	1 cut(s)	1167
GlaI	GCGC	3 cut(s)	1167, 1458, 1559
GluI	GCNGC	5 cut(s)	48, 51, 243, 998, 1372
GsuI	CTGGAG	1 cut(s)	1603
HaeIII	GGCC	5 cut(s)	205, 251, 1036, 1251, 1548
HapII	CCGG	5 cut(s)	695, 715, 834, 1038, 1248
HgaI	GACGC	1 cut(s)	1246
HhaI	GCGC	3 cut(s)	1168, 1459, 1560
Hin1I	GRCGYC	1 cut(s)	1238
Hin6I	GCGC	3 cut(s)	1166, 1457, 1558
HinP1I	GCGC	3 cut(s)	1166, 1457, 1558
HindIII	AAGCTT	2 cut(s)	89, 1219
HinfI	GANTC	3 cut(s)	146, 372, 1653
HpaII	CCGG	5 cut(s)	695, 715, 834, 1038, 1248
HphI	GGTGA	2 cut(s)	574, 1052
Hpy166II	GTNNAC	3 cut(s)	346, 857, 1191
Hpy188I	TCNGA	3 cut(s)	511, 672, 846
Hpy188III	TCNNGA	5 cut(s)	235, 875, 1145, 1413, 1582
Hpy8I	GTNNAC	3 cut(s)	346, 857, 1191
HpyCH4III	ACNGT	2 cut(s)	889, 899
HpyCH4IV	ACGT	3 cut(s)	851, 1187, 1488
HpyF10VI	GCNNNNNNNGC	7 cut(s)	23, 47, 248, 608, 863, 1218, 1566
HpyF3I	CTNAG	5 cut(s)	92, 246, 603, 1104, 1532
HpySE526I	ACGT	3 cut(s)	851, 1187, 1488
Hsp92I	GRCGYC	1 cut(s)	1238
HspAI	GCGC	3 cut(s)	1166, 1457, 1558
KflI	GGGWCCC	1 cut(s)	1267
KpnI	GGTACC	1 cut(s)	736
Kzo9I	GATC	7 cut(s)	80, 196, 877, 987, 1159, 1326, 1528
LmnI	GCTCC	5 cut(s)	174, 327, 454, 1177, 1209
Lsp1109I	GCAGC	5 cut(s)	34, 62, 254, 984, 1383
LweI	GCATC	5 cut(s)	589, 620, 637, 948, 1253
MaeI	CTAG	9 cut(s)	264, 416, 479, 525, 1094, 1346, 1413, 1610, 1687
MaeII	ACGT	3 cut(s)	851, 1187, 1488
MaeIII	GTNAC	4 cut(s)	576, 1428, 1443, 1594
MalI	GATC	7 cut(s)	82, 198, 879, 989, 1161, 1328, 1530
MboI	GATC	7 cut(s)	80, 196, 877, 987, 1159, 1326, 1528
MboII	GAAGA	9 cut(s)	175, 460, 485, 566, 733, 967, 997, 1373, 1401
MfeI	CAATTG	1 cut(s)	780
MflI	RGATCY	4 cut(s)	196, 1159, 1326, 1528
MhlI	GDGCHC	3 cut(s)	179, 298, 859
MluCI	AATT	8 cut(s)	218, 539, 557, 724, 780, 971, 1229, 1289
MmeI	TCCRAC	1 cut(s)	318
MroXI	GAANNNNTTC	1 cut(s)	1089
MseI	TTAA	4 cut(s)	356, 362, 377, 759
MspA1I	CMGCKG	1 cut(s)	47
MspCI	CTTAAG	1 cut(s)	758
MspI	CCGG	5 cut(s)	695, 715, 834, 1038, 1248
MspR9I	CCNGG	4 cut(s)	715, 834, 1038, 1338
MunI	CAATTG	1 cut(s)	780
Mva1269I	GAATGC	1 cut(s)	172
MvaI	CCWGG	1 cut(s)	1338
MwoI	GCNNNNNNNGC	7 cut(s)	23, 47, 248, 608, 863, 1218, 1566
NciI	CCSGG	3 cut(s)	715, 834, 1038
NcoI	CCATGG	2 cut(s)	771, 800
NdeII	GATC	7 cut(s)	80, 196, 877, 987, 1159, 1326, 1528
NlaIV	GGNNCC	7 cut(s)	198, 442, 734, 777, 798, 1268, 1269
NmeAIII	GCCGAG	1 cut(s)	1524
NmuCI	GTSAC	1 cut(s)	1443
NsbI	TGCGCA	1 cut(s)	1167
NspI	RCATGY	2 cut(s)	912, 1172
PaeI	GCATGC	1 cut(s)	1172
PceI	AGGCCT	2 cut(s)	205, 251
PciI	ACATGT	1 cut(s)	908
PctI	GAATGC	1 cut(s)	172
PdmI	GAANNNNTTC	1 cut(s)	1089
PfeI	GAWTC	3 cut(s)	146, 372, 1653
PflMI	CCANNNNNTGG	1 cut(s)	1206
PkrI	GCNGC	5 cut(s)	49, 52, 244, 999, 1373
Ppu21I	YACGTR	1 cut(s)	852
PpuMI	RGGWCCY	1 cut(s)	1267
PscI	ACATGT	1 cut(s)	908
Psp124BI	GAGCTC	1 cut(s)	179
Psp5II	RGGWCCY	1 cut(s)	1267
Psp6I	CCWGG	1 cut(s)	1336
PspGI	CCWGG	1 cut(s)	1336
PspN4I	GGNNCC	7 cut(s)	198, 442, 734, 777, 798, 1268, 1269
PspPI	GGNCC	3 cut(s)	692, 1035, 1267
PspPPI	RGGWCCY	1 cut(s)	1267
PsrI	GAACNNNNNNTAC	2 cut(s)	1122, 1154
PstI	CTGCAG	1 cut(s)	52
PsuI	RGATCY	4 cut(s)	196, 1159, 1326, 1528
PvuII	CAGCTG	1 cut(s)	47
RsaI	GTAC	8 cut(s)	628, 707, 734, 886, 932, 1311, 1360, 1622
RsaNI	GTAC	8 cut(s)	627, 706, 733, 885, 931, 1310, 1359, 1621
SacI	GAGCTC	1 cut(s)	179
SaqAI	TTAA	4 cut(s)	356, 362, 377, 759
SatI	GCNGC	5 cut(s)	48, 51, 243, 998, 1372
Sau3AI	GATC	7 cut(s)	80, 196, 877, 987, 1159, 1326, 1528
Sau96I	GGNCC	3 cut(s)	692, 1035, 1267
ScaI	AGTACT	2 cut(s)	628, 932
ScrFI	CCNGG	4 cut(s)	715, 834, 1038, 1338
SduI	GDGCHC	3 cut(s)	179, 298, 859
SfaNI	GCATC	5 cut(s)	589, 620, 637, 948, 1253
SfcI	CTRYAG	1 cut(s)	48
SinI	GGWCC	2 cut(s)	692, 1267
SmlI	CTYRAG	1 cut(s)	758
SmoI	CTYRAG	1 cut(s)	758
SphI	GCATGC	1 cut(s)	1172
Sse9I	AATT	8 cut(s)	218, 539, 557, 724, 780, 971, 1229, 1289
SseBI	AGGCCT	2 cut(s)	205, 251
SsiI	CCGC	1 cut(s)	1569
SspI	AATATT	1 cut(s)	281
SspMI	CTAG	9 cut(s)	264, 416, 479, 525, 1094, 1346, 1413, 1610, 1687
SstI	GAGCTC	1 cut(s)	179
StuI	AGGCCT	2 cut(s)	205, 251
StyD4I	CCNGG	4 cut(s)	713, 832, 1036, 1336
StyI	CCWWGG	5 cut(s)	200, 252, 771, 800, 1200
TaaI	ACNGT	2 cut(s)	889, 899
TaiI	ACGT	3 cut(s)	854, 1190, 1491
TaqI	TCGA	3 cut(s)	298, 1281, 1294
TasI	AATT	8 cut(s)	218, 539, 557, 724, 780, 971, 1229, 1289
TatI	WGTACW	3 cut(s)	626, 930, 1358
TfiI	GAWTC	3 cut(s)	146, 372, 1653
Tru1I	TTAA	4 cut(s)	356, 362, 377, 759
Tru9I	TTAA	4 cut(s)	356, 362, 377, 759
TscAI	CASTG	4 cut(s)	353, 1131, 1373, 1452
TseFI	GTSAC	1 cut(s)	1443
TseI	GCWGC	5 cut(s)	47, 50, 242, 997, 1371
Tsp45I	GTSAC	1 cut(s)	1443
TspDTI	ATGAA	8 cut(s)	345, 461, 491, 538, 1373, 1382, 1471, 1577
TspGWI	ACGGA	1 cut(s)	936
TspRI	CASTG	4 cut(s)	353, 1131, 1373, 1452
Van91I	CCANNNNNTGG	1 cut(s)	1206
Vha464I	CTTAAG	1 cut(s)	758
VneI	GTGCAC	1 cut(s)	855
VpaK11BI	GGWCC	2 cut(s)	692, 1267
XapI	RAATTY	3 cut(s)	724, 1229, 1289
XbaI	TCTAGA	1 cut(s)	1412
XceI	RCATGY	2 cut(s)	912, 1172
XcmI	CCANNNNNNNNNTGG	1 cut(s)	921
XmnI	GAANNNNTTC	1 cut(s)	1089
XspI	CTAG	9 cut(s)	264, 416, 479, 525, 1094, 1346, 1413, 1610, 1687
ZrmI	AGTACT	2 cut(s)	628, 932

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.