Chlorophyllide a oxygenase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G44446 AT1G44446 AT1G44446 AT1G44446 |
| fragaria_vesca | FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 |
| malus_domestica | MD08G1162200.v1.1 MD15G1347600.v1.1 |
| prunus_persica | Prupe.1G495400_v2.0.a1 |
| pyrus_communis | pycom08g14010 pycom15g31160 |
| rosa_chinensis | RchiOBHm_Chr6g0295881 |
| rosa_laevigata | RLG00000011760 |
| rosa_multiflora | Rmu_sc0003139.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00172090 |
| rosa_rugosa | Rorug06G0255000 |
| rosa_samantha | Rh6AG368500 Rh6BG376300 Rh6CG382400 Rh6DG369000 |
| rosa_wichuraiana | Rw6G032130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 963 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 415 |
| AccII | CGCG | 4 cut(s) | 22, 47, 566, 1075 |
| AciI | CCGC | 2 cut(s) | 47, 566 |
| AclI | AACGTT | 1 cut(s) | 789 |
| AclWI | GGATC | 3 cut(s) | 353, 366, 1152 |
| AcsI | RAATTY | 3 cut(s) | 89, 371, 829 |
| AcuI | CTGAAG | 1 cut(s) | 1170 |
| AcvI | CACGTG | 2 cut(s) | 16, 1014 |
| AdeI | CACNNNGTG | 1 cut(s) | 1087 |
| AfaI | GTAC | 1 cut(s) | 547 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 415, 496, 1025, 1030, 1197 |
| AflIII | ACRYGT | 1 cut(s) | 1052 |
| AgsI | TTSAA | 7 cut(s) | 95, 180, 787, 806, 826, 1041, 1206 |
| AjnI | CCWGG | 3 cut(s) | 257, 408, 937 |
| AluBI | AGCT | 9 cut(s) | 176, 206, 212, 250, 458, 562, 679, 971, 1220 |
| AluI | AGCT | 9 cut(s) | 176, 206, 212, 250, 458, 562, 679, 971, 1220 |
| Alw21I | GWGCWC | 5 cut(s) | 341, 460, 474, 564, 1222 |
| AlwI | GGATC | 3 cut(s) | 353, 366, 1152 |
| Ama87I | CYCGRG | 1 cut(s) | 525 |
| AoxI | GGCC | 3 cut(s) | 411, 1003, 1139 |
| ApeKI | GCWGC | 3 cut(s) | 206, 209, 1250 |
| ApoI | RAATTY | 3 cut(s) | 89, 371, 829 |
| AspLEI | GCGC | 2 cut(s) | 22, 964 |
| AspS9I | GGNCC | 3 cut(s) | 797, 1003, 1140 |
| AsuC2I | CCSGG | 1 cut(s) | 1143 |
| AsuHPI | GGTGA | 1 cut(s) | 844 |
| AvaI | CYCGRG | 1 cut(s) | 525 |
| AvaII | GGWCC | 1 cut(s) | 797 |
| BaeGI | GKGCMC | 1 cut(s) | 1019 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 864, 897 |
| BamHI | GGATCC | 1 cut(s) | 358 |
| BanII | GRGCYC | 3 cut(s) | 460, 564, 1222 |
| BbrPI | CACGTG | 2 cut(s) | 16, 1014 |
| Bbv12I | GWGCWC | 5 cut(s) | 341, 460, 474, 564, 1222 |
| BbvI | GCAGC | 3 cut(s) | 193, 221, 1237 |
| BccI | CCATC | 6 cut(s) | 822, 923, 1040, 1075, 1115, 1172 |
| BceAI | ACGGC | 1 cut(s) | 990 |
| BciT130I | CCWGG | 3 cut(s) | 259, 410, 939 |
| BciVI | GTATCC | 1 cut(s) | 849 |
| BcnI | CCSGG | 1 cut(s) | 1143 |
| BfaI | CTAG | 4 cut(s) | 426, 521, 584, 749 |
| BfmI | CTRYAG | 4 cut(s) | 52, 207, 540, 1195 |
| BfuI | GTATCC | 1 cut(s) | 849 |
| BisI | GCNGC | 3 cut(s) | 207, 210, 1251 |
| BlpI | GCTNAGC | 1 cut(s) | 251 |
| BlsI | GCNGC | 3 cut(s) | 208, 211, 1252 |
| Bme1390I | CCNGG | 4 cut(s) | 259, 410, 939, 1143 |
| Bme18I | GGWCC | 1 cut(s) | 797 |
| BmeT110I | CYCGRG | 1 cut(s) | 525 |
| BmgT120I | GGNCC | 3 cut(s) | 797, 1003, 1140 |
| BmiI | GGNNCC | 4 cut(s) | 59, 360, 882, 903 |
| BmrFI | CCNGG | 4 cut(s) | 259, 410, 939, 1143 |
| BmrI | ACTGGG | 1 cut(s) | 1230 |
| BmsI | GCATC | 3 cut(s) | 18, 391, 725 |
| BmuI | ACTGGG | 1 cut(s) | 1230 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 251 |
| BpuMI | CCSGG | 1 cut(s) | 1143 |
| Bsa29I | ATCGAT | 1 cut(s) | 1156 |
| BsaAI | YACGTR | 2 cut(s) | 16, 1014 |
| BsaJI | CCNNGG | 7 cut(s) | 362, 414, 708, 876, 905, 985, 1024 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 415, 496, 1025, 1030, 1197 |
| Bse1I | ACTGG | 2 cut(s) | 800, 1236 |
| Bse3DI | GCAATG | 1 cut(s) | 1100 |
| BseBI | CCWGG | 3 cut(s) | 259, 410, 939 |
| BseCI | ATCGAT | 1 cut(s) | 1156 |
| BseDI | CCNNGG | 7 cut(s) | 362, 414, 708, 876, 905, 985, 1024 |
| BseGI | GGATG | 5 cut(s) | 9, 406, 716, 814, 947 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 415, 496, 1025, 1030, 1197 |
| BseMI | GCAATG | 1 cut(s) | 1100 |
| BseMII | CTCAG | 2 cut(s) | 30, 1005 |
| BseNI | ACTGG | 2 cut(s) | 800, 1236 |
| BseRI | GAGGAG | 3 cut(s) | 46, 476, 762 |
| BseSI | GKGCMC | 1 cut(s) | 1019 |
| BseXI | GCAGC | 3 cut(s) | 193, 221, 1237 |
| BseYI | CCCAGC | 1 cut(s) | 728 |
| BsgI | GTGCAG | 1 cut(s) | 968 |
| Bsh1236I | CGCG | 4 cut(s) | 22, 47, 566, 1075 |
| BshFI | GGCC | 3 cut(s) | 413, 1005, 1141 |
| BshVI | ATCGAT | 1 cut(s) | 1156 |
| BsiHKAI | GWGCWC | 5 cut(s) | 341, 460, 474, 564, 1222 |
| BsiHKCI | CYCGRG | 1 cut(s) | 525 |
| BsiSI | CCGG | 1 cut(s) | 1143 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 415, 496, 1025, 1030, 1197 |
| BsmI | GAATGC | 2 cut(s) | 334, 1131 |
| BsnI | GGCC | 3 cut(s) | 413, 1005, 1141 |
| BsoBI | CYCGRG | 1 cut(s) | 525 |
| Bsp1286I | GDGCHC | 6 cut(s) | 341, 460, 474, 564, 1019, 1222 |
| Bsp143I | GATC | 4 cut(s) | 42, 358, 1153, 1157 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 251 |
| Bsp19I | CCATGG | 3 cut(s) | 876, 905, 1024 |
| BspACI | CCGC | 2 cut(s) | 47, 566 |
| BspANI | GGCC | 3 cut(s) | 413, 1005, 1141 |
| BspCNI | CTCAG | 2 cut(s) | 31, 1004 |
| BspDI | ATCGAT | 1 cut(s) | 1156 |
| BspFNI | CGCG | 4 cut(s) | 22, 47, 566, 1075 |
| BspLI | GGNNCC | 4 cut(s) | 59, 360, 882, 903 |
| BspMAI | CTGCAG | 2 cut(s) | 211, 1199 |
| BspPI | GGATC | 3 cut(s) | 353, 366, 1152 |
| BsrDI | GCAATG | 1 cut(s) | 1100 |
| BsrI | ACTGG | 2 cut(s) | 800, 1236 |
| BssECI | CCNNGG | 7 cut(s) | 362, 414, 708, 876, 905, 985, 1024 |
| BssMI | GATC | 4 cut(s) | 42, 358, 1153, 1157 |
| BssT1I | CCWWGG | 4 cut(s) | 414, 876, 905, 1024 |
| Bst2UI | CCWGG | 3 cut(s) | 259, 410, 939 |
| Bst4CI | ACNGT | 2 cut(s) | 441, 550 |
| Bst6I | CTCTTC | 1 cut(s) | 1180 |
| BstBAI | YACGTR | 2 cut(s) | 16, 1014 |
| BstC8I | GCNNGC | 5 cut(s) | 49, 456, 474, 564, 973 |
| BstDEI | CTNAG | 3 cut(s) | 39, 251, 991 |
| BstDSI | CCRYGG | 3 cut(s) | 876, 905, 1024 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1195 |
| BstF5I | GGATG | 5 cut(s) | 9, 406, 716, 814, 947 |
| BstFNI | CGCG | 4 cut(s) | 22, 47, 566, 1075 |
| BstHHI | GCGC | 2 cut(s) | 22, 964 |
| BstKTI | GATC | 4 cut(s) | 45, 361, 1156, 1160 |
| BstMBI | GATC | 4 cut(s) | 42, 358, 1153, 1157 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 57, 182, 206, 410, 968, 1072 |
| BstNI | CCWGG | 3 cut(s) | 259, 410, 939 |
| BstNSI | RCATGY | 1 cut(s) | 1056 |
| BstSCI | CCNGG | 4 cut(s) | 257, 408, 937, 1141 |
| BstSFI | CTRYAG | 4 cut(s) | 52, 207, 540, 1195 |
| BstSLI | GKGCMC | 1 cut(s) | 1019 |
| BstUI | CGCG | 4 cut(s) | 22, 47, 566, 1075 |
| BstV1I | GCAGC | 3 cut(s) | 193, 221, 1237 |
| BstX2I | RGATCY | 1 cut(s) | 358 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 637 |
| BstYI | RGATCY | 1 cut(s) | 358 |
| Bsu15I | ATCGAT | 1 cut(s) | 1156 |
| BsuI | GTATCC | 1 cut(s) | 849 |
| BsuRI | GGCC | 3 cut(s) | 413, 1005, 1141 |
| BsuTUI | ATCGAT | 1 cut(s) | 1156 |
| BtgI | CCRYGG | 3 cut(s) | 876, 905, 1024 |
| BtsCI | GGATG | 5 cut(s) | 9, 406, 716, 814, 947 |
| BtsIMutI | CAGTG | 1 cut(s) | 1243 |
| Cac8I | GCNNGC | 5 cut(s) | 49, 456, 474, 564, 973 |
| CfoI | GCGC | 2 cut(s) | 22, 964 |
| Cfr13I | GGNCC | 3 cut(s) | 797, 1003, 1140 |
| ClaI | ATCGAT | 1 cut(s) | 1156 |
| CseI | GACGC | 1 cut(s) | 11 |
| Csp6I | GTAC | 1 cut(s) | 546 |
| CviQI | GTAC | 1 cut(s) | 546 |
| DdeI | CTNAG | 3 cut(s) | 39, 251, 991 |
| DpnI | GATC | 4 cut(s) | 44, 360, 1155, 1159 |
| DpnII | GATC | 4 cut(s) | 42, 358, 1153, 1157 |
| DraIII | CACNNNGTG | 1 cut(s) | 1087 |
| Eam1104I | CTCTTC | 1 cut(s) | 1180 |
| EarI | CTCTTC | 1 cut(s) | 1180 |
| Ecl136II | GAGCTC | 3 cut(s) | 458, 562, 1220 |
| Eco130I | CCWWGG | 4 cut(s) | 414, 876, 905, 1024 |
| Eco147I | AGGCCT | 1 cut(s) | 413 |
| Eco24I | GRGCYC | 3 cut(s) | 460, 564, 1222 |
| Eco47I | GGWCC | 1 cut(s) | 797 |
| Eco53kI | GAGCTC | 3 cut(s) | 458, 562, 1220 |
| Eco57I | CTGAAG | 1 cut(s) | 1170 |
| Eco72I | CACGTG | 2 cut(s) | 16, 1014 |
| Eco88I | CYCGRG | 1 cut(s) | 525 |
| EcoICRI | GAGCTC | 3 cut(s) | 458, 562, 1220 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1195 |
| EcoRII | CCWGG | 3 cut(s) | 257, 408, 937 |
| EcoT14I | CCWWGG | 4 cut(s) | 414, 876, 905, 1024 |
| EcoT38I | GRGCYC | 3 cut(s) | 460, 564, 1222 |
| ErhI | CCWWGG | 4 cut(s) | 414, 876, 905, 1024 |
| FauI | CCCGC | 1 cut(s) | 40 |
| Fnu4HI | GCNGC | 3 cut(s) | 207, 210, 1251 |
| FokI | GGATG | 4 cut(s) | 413, 703, 801, 954 |
| FriOI | GRGCYC | 3 cut(s) | 460, 564, 1222 |
| Fsp4HI | GCNGC | 3 cut(s) | 207, 210, 1251 |
| FspAI | RTGCGCAY | 1 cut(s) | 963 |
| FspBI | CTAG | 4 cut(s) | 426, 521, 584, 749 |
| FspI | TGCGCA | 1 cut(s) | 963 |
| GlaI | GCGC | 2 cut(s) | 21, 963 |
| GluI | GCNGC | 3 cut(s) | 207, 210, 1251 |
| GsaI | CCCAGC | 1 cut(s) | 732 |
| HaeIII | GGCC | 3 cut(s) | 413, 1005, 1141 |
| HapII | CCGG | 1 cut(s) | 1143 |
| HgaI | GACGC | 1 cut(s) | 11 |
| HhaI | GCGC | 2 cut(s) | 22, 964 |
| Hin6I | GCGC | 2 cut(s) | 20, 962 |
| HinP1I | GCGC | 2 cut(s) | 20, 962 |
| HindIII | AAGCTT | 1 cut(s) | 248 |
| HinfI | GANTC | 2 cut(s) | 166, 752 |
| HpaII | CCGG | 1 cut(s) | 1143 |
| HphI | GGTGA | 1 cut(s) | 844 |
| Hpy166II | GTNNAC | 1 cut(s) | 505 |
| Hpy188I | TCNGA | 5 cut(s) | 302, 313, 363, 616, 709 |
| Hpy188III | TCNNGA | 5 cut(s) | 398, 749, 980, 1114, 1257 |
| Hpy8I | GTNNAC | 1 cut(s) | 505 |
| Hpy99I | CGWCG | 1 cut(s) | 27 |
| HpyAV | CCTTC | 4 cut(s) | 256, 732, 859, 1189 |
| HpyCH4III | ACNGT | 2 cut(s) | 441, 550 |
| HpyCH4IV | ACGT | 5 cut(s) | 15, 113, 507, 789, 1013 |
| HpyCH4V | TGCA | 7 cut(s) | 9, 209, 237, 404, 574, 949, 1197 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 57, 182, 206, 410, 968, 1072 |
| HpyF3I | CTNAG | 3 cut(s) | 39, 251, 991 |
| HpySE526I | ACGT | 5 cut(s) | 15, 113, 507, 789, 1013 |
| HspAI | GCGC | 2 cut(s) | 20, 962 |
| Kzo9I | GATC | 4 cut(s) | 42, 358, 1153, 1157 |
| LmnI | GCTCC | 4 cut(s) | 57, 336, 489, 559 |
| Lsp1109I | GCAGC | 3 cut(s) | 193, 221, 1237 |
| LweI | GCATC | 3 cut(s) | 18, 391, 725 |
| MaeI | CTAG | 4 cut(s) | 426, 521, 584, 749 |
| MaeII | ACGT | 5 cut(s) | 15, 113, 507, 789, 1013 |
| MaeIII | GTNAC | 1 cut(s) | 681 |
| MalI | GATC | 4 cut(s) | 44, 360, 1155, 1159 |
| MboI | GATC | 4 cut(s) | 42, 358, 1153, 1157 |
| MboII | GAAGA | 9 cut(s) | 334, 337, 590, 671, 696, 838, 1102, 1163, 1167 |
| MflI | RGATCY | 1 cut(s) | 358 |
| MhlI | GDGCHC | 6 cut(s) | 341, 460, 474, 564, 1019, 1222 |
| MluCI | AATT | 5 cut(s) | 89, 371, 644, 662, 829 |
| MlyI | GAGTC | 1 cut(s) | 175 |
| MmeI | TCCRAC | 2 cut(s) | 105, 618 |
| MseI | TTAA | 1 cut(s) | 1095 |
| MslI | CAYNNNNRTG | 2 cut(s) | 14, 1105 |
| MspA1I | CMGCKG | 1 cut(s) | 206 |
| MspI | CCGG | 1 cut(s) | 1143 |
| MspR9I | CCNGG | 4 cut(s) | 259, 410, 939, 1143 |
| Mva1269I | GAATGC | 2 cut(s) | 334, 1131 |
| MvaI | CCWGG | 3 cut(s) | 259, 410, 939 |
| MvnI | CGCG | 4 cut(s) | 22, 47, 566, 1075 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 57, 182, 206, 410, 968, 1072 |
| NciI | CCSGG | 1 cut(s) | 1143 |
| NcoI | CCATGG | 3 cut(s) | 876, 905, 1024 |
| NdeII | GATC | 4 cut(s) | 42, 358, 1153, 1157 |
| NlaIV | GGNNCC | 4 cut(s) | 59, 360, 882, 903 |
| NmeAIII | GCCGAG | 2 cut(s) | 966, 1241 |
| NsbI | TGCGCA | 1 cut(s) | 963 |
| NspI | RCATGY | 1 cut(s) | 1056 |
| PceI | AGGCCT | 1 cut(s) | 413 |
| PciI | ACATGT | 1 cut(s) | 1052 |
| PctI | GAATGC | 2 cut(s) | 334, 1131 |
| PfeI | GAWTC | 1 cut(s) | 752 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 415 |
| PkrI | GCNGC | 3 cut(s) | 208, 211, 1252 |
| PleI | GAGTC | 1 cut(s) | 174 |
| PmaCI | CACGTG | 2 cut(s) | 16, 1014 |
| PmlI | CACGTG | 2 cut(s) | 16, 1014 |
| PpsI | GAGTC | 1 cut(s) | 174 |
| Ppu21I | YACGTR | 2 cut(s) | 16, 1014 |
| PscI | ACATGT | 1 cut(s) | 1052 |
| Psp124BI | GAGCTC | 3 cut(s) | 460, 564, 1222 |
| Psp1406I | AACGTT | 1 cut(s) | 789 |
| Psp6I | CCWGG | 3 cut(s) | 257, 408, 937 |
| PspCI | CACGTG | 2 cut(s) | 16, 1014 |
| PspFI | CCCAGC | 1 cut(s) | 728 |
| PspGI | CCWGG | 3 cut(s) | 257, 408, 937 |
| PspN4I | GGNNCC | 4 cut(s) | 59, 360, 882, 903 |
| PspPI | GGNCC | 3 cut(s) | 797, 1003, 1140 |
| PstI | CTGCAG | 2 cut(s) | 211, 1199 |
| PsuI | RGATCY | 1 cut(s) | 358 |
| PvuII | CAGCTG | 1 cut(s) | 206 |
| RsaI | GTAC | 1 cut(s) | 547 |
| RsaNI | GTAC | 1 cut(s) | 546 |
| RseI | CAYNNNNRTG | 2 cut(s) | 14, 1105 |
| SacI | GAGCTC | 3 cut(s) | 460, 564, 1222 |
| SaqAI | TTAA | 1 cut(s) | 1095 |
| SatI | GCNGC | 3 cut(s) | 207, 210, 1251 |
| Sau3AI | GATC | 4 cut(s) | 42, 358, 1153, 1157 |
| Sau96I | GGNCC | 3 cut(s) | 797, 1003, 1140 |
| SbfI | CCTGCAGG | 1 cut(s) | 1199 |
| SchI | GAGTC | 1 cut(s) | 175 |
| ScrFI | CCNGG | 4 cut(s) | 259, 410, 939, 1143 |
| SdaI | CCTGCAGG | 1 cut(s) | 1199 |
| SduI | GDGCHC | 6 cut(s) | 341, 460, 474, 564, 1019, 1222 |
| SfaNI | GCATC | 3 cut(s) | 18, 391, 725 |
| SfcI | CTRYAG | 4 cut(s) | 52, 207, 540, 1195 |
| SinI | GGWCC | 1 cut(s) | 797 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 14, 1105 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1199 |
| Sse9I | AATT | 5 cut(s) | 89, 371, 644, 662, 829 |
| SseBI | AGGCCT | 1 cut(s) | 413 |
| SsiI | CCGC | 2 cut(s) | 47, 566 |
| SspMI | CTAG | 4 cut(s) | 426, 521, 584, 749 |
| SstI | GAGCTC | 3 cut(s) | 460, 564, 1222 |
| StuI | AGGCCT | 1 cut(s) | 413 |
| StyD4I | CCNGG | 4 cut(s) | 257, 408, 937, 1141 |
| StyI | CCWWGG | 4 cut(s) | 414, 876, 905, 1024 |
| TaaI | ACNGT | 2 cut(s) | 441, 550 |
| TaiI | ACGT | 5 cut(s) | 18, 116, 510, 792, 1016 |
| TaqI | TCGA | 6 cut(s) | 283, 368, 460, 775, 1113, 1156 |
| TasI | AATT | 5 cut(s) | 89, 371, 644, 662, 829 |
| TfiI | GAWTC | 1 cut(s) | 752 |
| Tru1I | TTAA | 1 cut(s) | 1095 |
| Tru9I | TTAA | 1 cut(s) | 1095 |
| TscAI | CASTG | 1 cut(s) | 1243 |
| TseI | GCWGC | 3 cut(s) | 206, 209, 1250 |
| TspDTI | ATGAA | 3 cut(s) | 17, 507, 596 |
| TspRI | CASTG | 1 cut(s) | 1243 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 415 |
| VpaK11BI | GGWCC | 1 cut(s) | 797 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1195 |
| XapI | RAATTY | 3 cut(s) | 89, 371, 829 |
| XbaI | TCTAGA | 1 cut(s) | 748 |
| XceI | RCATGY | 1 cut(s) | 1056 |
| XspI | CTAG | 4 cut(s) | 426, 521, 584, 749 |