Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0006821

Physical Location & Seq

Genomic Coordinates Forward (+)

56712796 .. 56717112

Gene Structure 4317 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG368500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGTTGTGTCTGTCAGCTTCAAACGCCATGAGCATAGTTGCCACAGCTGCAGCTCTATCTTTACCTATCTCTTTTTGCAGATCATCAAAGCTTAGCACCAAGAAGGGCGTGAAAGGATTTCGGGTTTTCGCTGTGTTGGGAGAGGAGTCAGGGGTAGATAAGAAGCATGCTTGGAGCTCACTCTTTGATGTGGAGGATCCAAGGCCTAAAAATCCAAAATTAGAAGGGAAGGTCTTGAAGGCAGCTCAGGCCTTGGAAGTTGCTAGATTTGATATACAATACTGTGATTGGCGCGCTCGACAAGATGTGCTAACAATCATGCTCCTCCATGAAAAGGTTGTGGAAGTTCTAAATCCTCTTGCCCGTGAGTACAAGTCTATCGGCACCATCAAGAAGGAGCTTGCAGAGTTGCAAGAAGAACTAGGACAGGCTCATAAAGAGGTTCATATCTCTGAAGCAAGAGTTGCTACTGCTTTAGATAAATTGGCTTTCATGGAAGAATTGGTGAATGATAAGCTGTTACAAGACAGGAACACTACTGATGCTGAGCAAGCATCCCCTTCTCCCAGTACTTCTACACAATCTTTGGATGCTGTAAAAAGGAGGAGGTCTCGGAAAGGCTTGAATGTTTCAGGTCCAGTTCAAACCTACCATCCTCGATTGAAGAATTTTTGGTACCCTGTTGCCTTCTCCACTAACCTTAAGGATGATACCATGGTGCCAATTGATTGTTTTGAGGAACCATGGGTTCTCTTTCGTGGAAAAGATGGGAAACCTGGATGTGTTCGGAATACCTGTGCACATAGAGCTTGCCCTCTTGACCTCGGTACAGTAAAAGATGGCCGTATTGCATGTCCATATCATGGATGGGAGTACTCAACTGATGGAAAATGTGAGAAGATGCCATCCACAAAATTACGCAATGTGAAGATTAAAGCATTGCCATGTTTTGAGCAAGATGGGATGTTATGGATTTGGCCTGGTGATGACCCTCCATCAGCCACTATTCCTTCTTTACAACCTCCTGCAGGATTTCAAATCCATGCTGAGCTGGTAATAGAACTCCCAGTGGAACATGGATTACTTCTGGATAATCTTTTAGATCTTGCGCATGCTCCTTTTACTCATACGTCCACCTTTGCCAAGGGATGGAGCGTTCCGAGCTTTGTGAAATTTTTGACACCTGCGTCCGGCCTGCAAGGGTATTGGGACCCTTATCCTATTGATATGGAGTTTCGACCACCTTGTATGGTACTCTCAACCATCGGGATCTCAAAGCCGGGAAAACTAGAAGGGCAGAGTACAAAGCAGTGCAGCACGCATCTTCATCAACTTCATGTGTGCTTACCTTCTTCTAGAAACAAAACAAGGTTACTATACAGAATGTCACTGGATTTTGCGCCTGTACTGAAGCACATTCCTTTCATGCACGTTTTATGGAGGCATTTTGCAGAGCAGGTAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006779 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009706 GO:0009941 GO:0009987 GO:0010277 GO:0015994 GO:0015995 GO:0016020 GO:0016491 GO:0016701 GO:0016703 GO:0018130 GO:0019438 GO:0019866 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0033013 GO:0033014 GO:0034357 GO:0034641 GO:0042170 GO:0042440 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046148 GO:0046483 GO:0051186 GO:0051188 GO:0055035 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00860 ko01100 ko01110 map00860 map01100 map01110

Pfam Domains

Protein Families

PaO Rieske

Protein Analysis

488

Amino Acids

54.63

Weight (kDa)

8.56

Isoelectric Point (pI)

48.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rieske	PF00355	225 - 305	7.7e-25	Rieske [2Fe-2S] domain
PaO	PF08417	412 - 485	1.8e-11	Pheophorbide a oxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44446 AT1G44446 AT1G44446 AT1G44446
fragaria_vesca	FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000
malus_domestica	MD08G1162200.v1.1 MD15G1347600.v1.1
prunus_persica	Prupe.1G495400_v2.0.a1
pyrus_communis	pycom08g14010 pycom15g31160
rosa_chinensis	RchiOBHm_Chr6g0295881
rosa_laevigata	RLG00000011760
rosa_multiflora	Rmu_sc0003139.1_g000003
rosa_roxburghii	Rroxscaffold_7G00172090
rosa_rugosa	Rorug06G0255000
rosa_samantha	Rh6AG368500 Rh6BG376300 Rh6CG382400 Rh6DG369000
rosa_wichuraiana	Rw6G032130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1192
AasI	GACNNNNNNGTC	1 cut(s)	1186
Acc16I	TGCGCA	1 cut(s)	1110
Acc36I	ACCTGC	2 cut(s)	1192, 1447
Acc65I	GGTACC	1 cut(s)	675
AccB1I	GGYRCC	3 cut(s)	383, 675, 718
AccB7I	CCANNNNNTGG	2 cut(s)	863, 1149
AccII	CGCG	1 cut(s)	294
AclWI	GGATC	3 cut(s)	191, 204, 1277
AcoI	YGGCCR	1 cut(s)	841
AcsI	RAATTY	2 cut(s)	667, 1172
AcuI	CTGAAG	2 cut(s)	474, 1430
AfaI	GTAC	8 cut(s)	371, 571, 677, 829, 875, 1254, 1303, 1407
AfiI	CCNNNNNNNGG	5 cut(s)	334, 863, 1028, 1149, 1190
AflII	CTTAAG	1 cut(s)	701
AgsI	TTSAA	6 cut(s)	21, 238, 625, 644, 664, 1037
AjnI	CCWGG	2 cut(s)	775, 979
AloI	GAACNNNNNNTCC	2 cut(s)	1140, 1172
Alw21I	GWGCWC	2 cut(s)	179, 802
Alw26I	GTCTC	1 cut(s)	615
Alw44I	GTGCAC	1 cut(s)	798
AlwI	GGATC	3 cut(s)	191, 204, 1277
AoxI	GGCC	5 cut(s)	203, 249, 841, 977, 1192
ApaLI	GTGCAC	1 cut(s)	798
ApeKI	GCWGC	4 cut(s)	47, 50, 242, 1314
ApoI	RAATTY	2 cut(s)	667, 1172
Asp718I	GGTACC	1 cut(s)	675
AspLEI	GCGC	4 cut(s)	294, 296, 1111, 1402
AspS9I	GGNCC	2 cut(s)	635, 1210
AsuC2I	CCSGG	1 cut(s)	1281
AsuHPI	GGTGA	2 cut(s)	517, 995
AvaII	GGWCC	2 cut(s)	635, 1210
BaeGI	GKGCMC	1 cut(s)	802
BaeI	ACNNNNGTAYC	2 cut(s)	702, 735
BamHI	GGATCC	1 cut(s)	196
BanI	GGYRCC	3 cut(s)	383, 675, 718
BanII	GRGCYC	1 cut(s)	179
Bbv12I	GWGCWC	2 cut(s)	179, 802
BbvI	GCAGC	4 cut(s)	34, 62, 254, 1326
BceAI	ACGGC	1 cut(s)	828
BciT130I	CCWGG	2 cut(s)	777, 981
BcnI	CCSGG	1 cut(s)	1281
BcoDI	GTCTC	1 cut(s)	615
BfaI	CTAG	4 cut(s)	264, 422, 1289, 1356
BfmI	CTRYAG	2 cut(s)	48, 1026
BfrI	CTTAAG	1 cut(s)	701
BfuAI	ACCTGC	2 cut(s)	1192, 1447
BglII	AGATCT	1 cut(s)	1102
BisI	GCNGC	4 cut(s)	48, 51, 243, 1315
BlpI	GCTNAGC	3 cut(s)	92, 546, 1047
BlsI	GCNGC	4 cut(s)	49, 52, 244, 1316
BmcAI	AGTACT	2 cut(s)	571, 875
Bme1390I	CCNGG	3 cut(s)	777, 981, 1281
Bme18I	GGWCC	2 cut(s)	635, 1210
BmgT120I	GGNCC	2 cut(s)	635, 1210
BmiI	GGNNCC	7 cut(s)	198, 385, 677, 720, 741, 1211, 1212
BmrFI	CCNGG	3 cut(s)	777, 981, 1281
BmrI	ACTGGG	2 cut(s)	561, 1061
BmsI	GCATC	5 cut(s)	532, 563, 580, 891, 1330
BmuI	ACTGGG	2 cut(s)	561, 1061
BplI	GAGNNNNNCTC	2 cut(s)	595, 627
Bpu10I	CCTNAGC	1 cut(s)	246
Bpu1102I	GCTNAGC	3 cut(s)	92, 546, 1047
BpuMI	CCSGG	1 cut(s)	1281
BsaI	GGTCTC	1 cut(s)	615
BsaJI	CCNNGG	6 cut(s)	200, 252, 714, 743, 823, 1143
Bsc4I	CCNNNNNNNGG	5 cut(s)	334, 863, 1028, 1149, 1190
Bse1I	ACTGG	4 cut(s)	567, 638, 1067, 1395
Bse3DI	GCAATG	2 cut(s)	928, 938
BseBI	CCWGG	2 cut(s)	777, 981
BseDI	CCNNGG	6 cut(s)	200, 252, 714, 743, 823, 1143
BseGI	GGATG	9 cut(s)	554, 595, 652, 712, 785, 872, 905, 969, 1154
BseLI	CCNNNNNNNGG	5 cut(s)	334, 863, 1028, 1149, 1190
BseMI	GCAATG	2 cut(s)	928, 938
BseMII	CTCAG	3 cut(s)	260, 537, 1038
BseNI	ACTGG	4 cut(s)	567, 638, 1067, 1395
BsePI	GCGCGC	1 cut(s)	292
BseRI	GAGGAG	3 cut(s)	158, 314, 619
BseSI	GKGCMC	1 cut(s)	802
BseXI	GCAGC	4 cut(s)	34, 62, 254, 1326
BsgI	GTGCAG	1 cut(s)	1333
Bsh1236I	CGCG	1 cut(s)	294
BshFI	GGCC	5 cut(s)	205, 251, 843, 979, 1194
BshNI	GGYRCC	3 cut(s)	383, 675, 718
BsiHKAI	GWGCWC	2 cut(s)	179, 802
BsiSI	CCGG	2 cut(s)	1191, 1280
BslFI	GGGAC	1 cut(s)	1223
BslI	CCNNNNNNNGG	5 cut(s)	334, 863, 1028, 1149, 1190
BsmAI	GTCTC	1 cut(s)	615
BsmFI	GGGAC	1 cut(s)	1223
BsnI	GGCC	5 cut(s)	205, 251, 843, 979, 1194
Bso31I	GGTCTC	1 cut(s)	615
Bsp1286I	GDGCHC	2 cut(s)	179, 802
Bsp143I	GATC	4 cut(s)	80, 196, 1102, 1269
Bsp1720I	GCTNAGC	3 cut(s)	92, 546, 1047
Bsp19I	CCATGG	2 cut(s)	714, 743
BspANI	GGCC	5 cut(s)	205, 251, 843, 979, 1194
BspCNI	CTCAG	3 cut(s)	259, 538, 1039
BspFNI	CGCG	1 cut(s)	294
BspLI	GGNNCC	7 cut(s)	198, 385, 677, 720, 741, 1211, 1212
BspMAI	CTGCAG	2 cut(s)	52, 1030
BspMI	ACCTGC	2 cut(s)	1192, 1447
BspPI	GGATC	3 cut(s)	191, 204, 1277
BspT107I	GGYRCC	3 cut(s)	383, 675, 718
BspTI	CTTAAG	1 cut(s)	701
BspTNI	GGTCTC	1 cut(s)	615
BsrDI	GCAATG	2 cut(s)	928, 938
BsrI	ACTGG	4 cut(s)	567, 638, 1067, 1395
BssECI	CCNNGG	6 cut(s)	200, 252, 714, 743, 823, 1143
BssHII	GCGCGC	1 cut(s)	292
BssMI	GATC	4 cut(s)	80, 196, 1102, 1269
BssT1I	CCWWGG	5 cut(s)	200, 252, 714, 743, 1143
Bst2UI	CCWGG	2 cut(s)	777, 981
Bst4CI	ACNGT	2 cut(s)	284, 832
BstAFI	CTTAAG	1 cut(s)	701
BstAPI	GCANNNNNTGC	1 cut(s)	464
BstC8I	GCNNGC	8 cut(s)	168, 294, 402, 552, 811, 1113, 1196, 1319
BstDEI	CTNAG	4 cut(s)	92, 246, 546, 1047
BstDSI	CCRYGG	2 cut(s)	714, 743
BstENI	CCTNNNNNAGG	1 cut(s)	1026
BstF5I	GGATG	9 cut(s)	554, 595, 652, 712, 785, 872, 905, 969, 1154
BstFNI	CGCG	1 cut(s)	294
BstHHI	GCGC	4 cut(s)	294, 296, 1111, 1402
BstKTI	GATC	4 cut(s)	83, 199, 1105, 1272
BstMAI	GTCTC	1 cut(s)	615
BstMBI	GATC	4 cut(s)	80, 196, 1102, 1269
BstMWI	GCNNNNNNNGC	7 cut(s)	23, 47, 248, 464, 551, 806, 1161
BstNI	CCWGG	2 cut(s)	777, 981
BstNSI	RCATGY	3 cut(s)	170, 855, 1115
BstSCI	CCNGG	3 cut(s)	775, 979, 1279
BstSFI	CTRYAG	2 cut(s)	48, 1026
BstSLI	GKGCMC	1 cut(s)	802
BstUI	CGCG	1 cut(s)	294
BstV1I	GCAGC	4 cut(s)	34, 62, 254, 1326
BstX2I	RGATCY	3 cut(s)	196, 1102, 1269
BstYI	RGATCY	3 cut(s)	196, 1102, 1269
BsuRI	GGCC	5 cut(s)	205, 251, 843, 979, 1194
BtgI	CCRYGG	2 cut(s)	714, 743
BtsCI	GGATG	9 cut(s)	554, 595, 652, 712, 785, 872, 905, 969, 1154
BtsI	GCAGTG	1 cut(s)	1316
BtsIMutI	CAGTG	3 cut(s)	1074, 1316, 1388
BveI	ACCTGC	2 cut(s)	1192, 1447
Cac8I	GCNNGC	8 cut(s)	168, 294, 402, 552, 811, 1113, 1196, 1319
CfoI	GCGC	4 cut(s)	294, 296, 1111, 1402
Cfr13I	GGNCC	2 cut(s)	635, 1210
CseI	GACGC	1 cut(s)	1176
Csp6I	GTAC	8 cut(s)	370, 570, 676, 828, 874, 1253, 1302, 1406
CviQI	GTAC	8 cut(s)	370, 570, 676, 828, 874, 1253, 1302, 1406
DdeI	CTNAG	4 cut(s)	92, 246, 546, 1047
DpnI	GATC	4 cut(s)	82, 198, 1104, 1271
DpnII	GATC	4 cut(s)	80, 196, 1102, 1269
DrdI	GACNNNNNNGTC	1 cut(s)	1186
DseDI	GACNNNNNNGTC	1 cut(s)	1186
EaeI	YGGCCR	1 cut(s)	841
Ecl136II	GAGCTC	1 cut(s)	177
Eco130I	CCWWGG	5 cut(s)	200, 252, 714, 743, 1143
Eco147I	AGGCCT	2 cut(s)	205, 251
Eco24I	GRGCYC	1 cut(s)	179
Eco31I	GGTCTC	1 cut(s)	615
Eco47I	GGWCC	2 cut(s)	635, 1210
Eco53kI	GAGCTC	1 cut(s)	177
Eco57I	CTGAAG	2 cut(s)	474, 1430
EcoICRI	GAGCTC	1 cut(s)	177
EcoNI	CCTNNNNNAGG	1 cut(s)	1026
EcoO109I	RGGNCCY	1 cut(s)	1210
EcoRII	CCWGG	2 cut(s)	775, 979
EcoT14I	CCWWGG	5 cut(s)	200, 252, 714, 743, 1143
EcoT38I	GRGCYC	1 cut(s)	179
ErhI	CCWWGG	5 cut(s)	200, 252, 714, 743, 1143
FaqI	GGGAC	1 cut(s)	1223
Fnu4HI	GCNGC	4 cut(s)	48, 51, 243, 1315
FokI	GGATG	9 cut(s)	541, 602, 639, 719, 792, 879, 892, 976, 1161
FriOI	GRGCYC	1 cut(s)	179
Fsp4HI	GCNGC	4 cut(s)	48, 51, 243, 1315
FspBI	CTAG	4 cut(s)	264, 422, 1289, 1356
FspI	TGCGCA	1 cut(s)	1110
GlaI	GCGC	4 cut(s)	293, 295, 1110, 1401
GluI	GCNGC	4 cut(s)	48, 51, 243, 1315
HaeIII	GGCC	5 cut(s)	205, 251, 843, 979, 1194
HapII	CCGG	2 cut(s)	1191, 1280
HgaI	GACGC	1 cut(s)	1176
HhaI	GCGC	4 cut(s)	294, 296, 1111, 1402
Hin6I	GCGC	4 cut(s)	292, 294, 1109, 1400
HinP1I	GCGC	4 cut(s)	292, 294, 1109, 1400
HindIII	AAGCTT	1 cut(s)	89
HinfI	GANTC	1 cut(s)	146
HpaII	CCGG	2 cut(s)	1191, 1280
HphI	GGTGA	2 cut(s)	517, 995
Hpy166II	GTNNAC	2 cut(s)	800, 1134
Hpy188I	TCNGA	4 cut(s)	454, 615, 789, 1161
Hpy188III	TCNNGA	6 cut(s)	235, 391, 818, 1088, 1267, 1356
Hpy8I	GTNNAC	2 cut(s)	800, 1134
HpyCH4III	ACNGT	2 cut(s)	284, 832
HpyCH4IV	ACGT	2 cut(s)	1130, 1431
HpyF10VI	GCNNNNNNNGC	7 cut(s)	23, 47, 248, 464, 551, 806, 1161
HpyF3I	CTNAG	4 cut(s)	92, 246, 546, 1047
HpySE526I	ACGT	2 cut(s)	1130, 1431
HspAI	GCGC	4 cut(s)	292, 294, 1109, 1400
KflI	GGGWCCC	1 cut(s)	1210
KpnI	GGTACC	1 cut(s)	679
Kzo9I	GATC	4 cut(s)	80, 196, 1102, 1269
LmnI	GCTCC	5 cut(s)	174, 327, 397, 1120, 1152
Lsp1109I	GCAGC	4 cut(s)	34, 62, 254, 1326
LweI	GCATC	5 cut(s)	532, 563, 580, 891, 1330
MaeI	CTAG	4 cut(s)	264, 422, 1289, 1356
MaeII	ACGT	2 cut(s)	1130, 1431
MaeIII	GTNAC	3 cut(s)	519, 1371, 1386
MalI	GATC	4 cut(s)	82, 198, 1104, 1271
MboI	GATC	4 cut(s)	80, 196, 1102, 1269
MboII	GAAGA	7 cut(s)	428, 509, 676, 910, 940, 1316, 1344
MfeI	CAATTG	1 cut(s)	723
MflI	RGATCY	3 cut(s)	196, 1102, 1269
MhlI	GDGCHC	2 cut(s)	179, 802
MluCI	AATT	8 cut(s)	218, 482, 500, 667, 723, 914, 1172, 1462
MlyI	GAGTC	1 cut(s)	155
MseI	TTAA	2 cut(s)	702, 933
MslI	CAYNNNNRTG	1 cut(s)	943
MspA1I	CMGCKG	1 cut(s)	47
MspCI	CTTAAG	1 cut(s)	701
MspI	CCGG	2 cut(s)	1191, 1280
MspR9I	CCNGG	3 cut(s)	777, 981, 1281
MunI	CAATTG	1 cut(s)	723
MvaI	CCWGG	2 cut(s)	777, 981
MvnI	CGCG	1 cut(s)	294
MwoI	GCNNNNNNNGC	7 cut(s)	23, 47, 248, 464, 551, 806, 1161
NciI	CCSGG	1 cut(s)	1281
NcoI	CCATGG	2 cut(s)	714, 743
NdeII	GATC	4 cut(s)	80, 196, 1102, 1269
NlaIV	GGNNCC	7 cut(s)	198, 385, 677, 720, 741, 1211, 1212
NmuCI	GTSAC	1 cut(s)	1386
NsbI	TGCGCA	1 cut(s)	1110
NspI	RCATGY	3 cut(s)	170, 855, 1115
PaeI	GCATGC	2 cut(s)	170, 1115
PaqCI	CACCTGC	1 cut(s)	1192
PauI	GCGCGC	1 cut(s)	292
PceI	AGGCCT	2 cut(s)	205, 251
PflMI	CCANNNNNTGG	2 cut(s)	863, 1149
PkrI	GCNGC	4 cut(s)	49, 52, 244, 1316
PleI	GAGTC	1 cut(s)	154
PpsI	GAGTC	1 cut(s)	154
PpuMI	RGGWCCY	1 cut(s)	1210
Psp124BI	GAGCTC	1 cut(s)	179
Psp5II	RGGWCCY	1 cut(s)	1210
Psp6I	CCWGG	2 cut(s)	775, 979
PspGI	CCWGG	2 cut(s)	775, 979
PspN4I	GGNNCC	7 cut(s)	198, 385, 677, 720, 741, 1211, 1212
PspPI	GGNCC	2 cut(s)	635, 1210
PspPPI	RGGWCCY	1 cut(s)	1210
PsrI	GAACNNNNNNTAC	2 cut(s)	1065, 1097
PstI	CTGCAG	2 cut(s)	52, 1030
PsuI	RGATCY	3 cut(s)	196, 1102, 1269
PteI	GCGCGC	1 cut(s)	292
PvuII	CAGCTG	1 cut(s)	47
RsaI	GTAC	8 cut(s)	371, 571, 677, 829, 875, 1254, 1303, 1407
RsaNI	GTAC	8 cut(s)	370, 570, 676, 828, 874, 1253, 1302, 1406
RseI	CAYNNNNRTG	1 cut(s)	943
SacI	GAGCTC	1 cut(s)	179
SaqAI	TTAA	2 cut(s)	702, 933
SatI	GCNGC	4 cut(s)	48, 51, 243, 1315
Sau3AI	GATC	4 cut(s)	80, 196, 1102, 1269
Sau96I	GGNCC	2 cut(s)	635, 1210
SbfI	CCTGCAGG	1 cut(s)	1030
ScaI	AGTACT	2 cut(s)	571, 875
SchI	GAGTC	1 cut(s)	155
ScrFI	CCNGG	3 cut(s)	777, 981, 1281
SdaI	CCTGCAGG	1 cut(s)	1030
SduI	GDGCHC	2 cut(s)	179, 802
SfaNI	GCATC	5 cut(s)	532, 563, 580, 891, 1330
SfcI	CTRYAG	2 cut(s)	48, 1026
SinI	GGWCC	2 cut(s)	635, 1210
SmiMI	CAYNNNNRTG	1 cut(s)	943
SmlI	CTYRAG	1 cut(s)	701
SmoI	CTYRAG	1 cut(s)	701
SphI	GCATGC	2 cut(s)	170, 1115
Sse8387I	CCTGCAGG	1 cut(s)	1030
Sse9I	AATT	8 cut(s)	218, 482, 500, 667, 723, 914, 1172, 1462
SseBI	AGGCCT	2 cut(s)	205, 251
SspMI	CTAG	4 cut(s)	264, 422, 1289, 1356
SstI	GAGCTC	1 cut(s)	179
StuI	AGGCCT	2 cut(s)	205, 251
StyD4I	CCNGG	3 cut(s)	775, 979, 1279
StyI	CCWWGG	5 cut(s)	200, 252, 714, 743, 1143
TaaI	ACNGT	2 cut(s)	284, 832
TaiI	ACGT	2 cut(s)	1133, 1434
TaqI	TCGA	3 cut(s)	298, 658, 1237
TasI	AATT	8 cut(s)	218, 482, 500, 667, 723, 914, 1172, 1462
TatI	WGTACW	5 cut(s)	369, 569, 873, 1301, 1405
Tru1I	TTAA	2 cut(s)	702, 933
Tru9I	TTAA	2 cut(s)	702, 933
TscAI	CASTG	3 cut(s)	1074, 1316, 1395
TseFI	GTSAC	1 cut(s)	1386
TseI	GCWGC	4 cut(s)	47, 50, 242, 1314
Tsp45I	GTSAC	1 cut(s)	1386
TspDTI	ATGAA	6 cut(s)	345, 434, 481, 1316, 1325, 1414
TspRI	CASTG	3 cut(s)	1074, 1316, 1395
Van91I	CCANNNNNTGG	2 cut(s)	863, 1149
Vha464I	CTTAAG	1 cut(s)	701
VneI	GTGCAC	1 cut(s)	798
VpaK11BI	GGWCC	2 cut(s)	635, 1210
XagI	CCTNNNNNAGG	1 cut(s)	1026
XapI	RAATTY	2 cut(s)	667, 1172
XbaI	TCTAGA	1 cut(s)	1355
XceI	RCATGY	3 cut(s)	170, 855, 1115
XcmI	CCANNNNNNNNNTGG	1 cut(s)	864
XspI	CTAG	4 cut(s)	264, 422, 1289, 1356
ZrmI	AGTACT	2 cut(s)	571, 875

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.