Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0006821

Physical Location & Seq

Genomic Coordinates Reverse (-)

19023197 .. 19026711

Gene Structure 3515 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1162200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGAGTCTGTCAGCTTCAAACGCCATGACCATTGTAGCCACAGCTGCAGCTCTATCTCTGCCAATATCTTTTTGCAGAACGACCAAGCTTAGCACCAGGAAGGGTGTGAAAGGAGGATTTCGAGTATTTGCTGTATTCGGAGAGCAGTCAGATATAGAGAAGAAGAATGCTTGGAGCACACTCTTTGATGTGGAGGATCCAAGGTCGAAATTTCCACAATCTAAGGGCAAGTTTCTGGATGCAAACCAGGCCTTGGAAGTTGCTAGATTTGATATACAGTATTGTGATTGGCGAGCTCGGCAAGATGTGCTCGCAATCATGCTCCTCCATGAAAAGGTTGTGGACGTTCTAAATCCTCTAGCCCGAGAATATAAGTCTATAGGTACTGTCAAAAAGGAGCTCGCAGAGTTGCAAGAAGAACTAGGGGAGGCTCATAGACAGGTTCATATATCGGAAGCAAGGGTTTCCACAGCGTTGGATAAATTGGCTTACATGGAAGAATTAGTGAATGATAAGCTGTTACAGGATAGAGCAACTACATCTTCCGAGGAAGCATCCCCTTCTCCCAGCACTTCTACGCAATCTCTAGATTCTGTAAAAAGGAAGCCTCCTCGAAAAAGCTTGAACGTTTCAGGTCCAGTTCAATCCTACCATCCCCGATTGAAGAATTTTTGGTATCCTGTTGCCTTCACCACTGACCTGAAAGATGATACCATGGTGCCACTTGATTGTTTTGAGGAACCATGGGTTCTCTTTCGTGGAAAAGATGGGAAACCTGGATGTGTGCAGAATACTTGTGCGCACAGAGCTTGCCCTCTTGACCTCGGCTCAGTAAATGAGGGCCGTATCACGTGCCCTTACCATGGGTGGGAGTATTCAACCGATGGAACATGTGAAAAAATGCCATCTACGCGATTACACAAAGTGAAGATTAAGTCATTGCCATGTTTCGAGAAAGATGGAATGTTGTGGATTTGGCCCGGTGCTGATCCTCCGTCAGCCACCCTTCCTTCTTTACAACCTCCTGCAGGATTTCAAATCCACGCCGAGCTCGTCATAGAACTCCCAGTGGAACATGGGCTGCTTCTTGATAACCTTTTAGATCTCGCTCATGCTCCTTTCACTCACACGTCCACCTTTGCGAAGGGATGGAGTGTTCCTAGCTTCGTGAAATTCTTGACGCCTACGTCTGGCCTCCAAGGATATTGGGACCCTTATCCTATAGATATGGAATTTCGACCACCTTGTATGGTAAATTCAACCATCGGGATCTCAAAACCGGGAAAACTGGAAGGGCAGAGTACTAGACAGTGTTCCACACATCTTCATCAACTCCACGTATGCTTACCTTCTTCGAGAGGTAAAACAAGGTTATTATACAGAATGTCACTGGATTTTGCGCCCGTGCTGAAGCACGTTCCATTCATGAACTTTATGTGGAGGCATTTTGCCCAACAGGTTTTGAACGAGGATCTAAGGCTCGTGCTAGGTCAACAAGAGCGAATGAACAACGGGGCAAATGTCTGGAATTGGCCGGTGACATATGACAAGCTAGGAGTGAGGTACAGACAATGGAGAGACGCCTTGGAACGAGGAGATAAACAACTACCCTTCACCAAATCAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006779 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009706 GO:0009941 GO:0009987 GO:0010277 GO:0015994 GO:0015995 GO:0016020 GO:0016491 GO:0016701 GO:0016703 GO:0018130 GO:0019438 GO:0019866 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0033013 GO:0033014 GO:0034357 GO:0034641 GO:0042170 GO:0042440 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046148 GO:0046483 GO:0051186 GO:0051188 GO:0055035 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00860 ko01100 ko01110 map00860 map01100 map01110

Pfam Domains

Protein Families

PaO Rieske

Protein Analysis

543

Amino Acids

61.16

Weight (kDa)

8.47

Isoelectric Point (pI)

42.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rieske	PF00355	225 - 305	1.3e-24	Rieske [2Fe-2S] domain
VanA_C	PF19112	409 - 530	1.3e-08	Vanillate O-demethylase oxygenase C-terminal domain
PaO	PF08417	412 - 508	3.5e-19	Pheophorbide a oxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44446 AT1G44446 AT1G44446 AT1G44446
fragaria_vesca	FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000
malus_domestica	MD08G1162200.v1.1 MD15G1347600.v1.1
prunus_persica	Prupe.1G495400_v2.0.a1
pyrus_communis	pycom08g14010 pycom15g31160
rosa_chinensis	RchiOBHm_Chr6g0295881
rosa_laevigata	RLG00000011760
rosa_multiflora	Rmu_sc0003139.1_g000003
rosa_roxburghii	Rroxscaffold_7G00172090
rosa_rugosa	Rorug06G0255000
rosa_samantha	Rh6AG368500 Rh6BG376300 Rh6CG382400 Rh6DG369000
rosa_wichuraiana	Rw6G032130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1186
Acc16I	TGCGCA	1 cut(s)	801
AccB1I	GGYRCC	1 cut(s)	718
AccB7I	CCANNNNNTGG	1 cut(s)	253
AccII	CGCG	1 cut(s)	913
AclI	AACGTT	1 cut(s)	627
AclWI	GGATC	5 cut(s)	191, 204, 983, 1277, 1479
AcoI	YGGCCR	1 cut(s)	1532
AcsI	RAATTY	5 cut(s)	209, 667, 1172, 1232, 1255
AcuI	CTGAAG	1 cut(s)	1430
AcvI	CACGTG	1 cut(s)	852
AcyI	GRCGYC	2 cut(s)	1181, 1581
AdeI	CACNNNGTG	1 cut(s)	925
AfaI	GTAC	3 cut(s)	385, 1303, 1565
AfiI	CCNNNNNNNGG	6 cut(s)	253, 334, 863, 868, 1028, 1190
AflIII	ACRYGT	2 cut(s)	890, 1128
AgsI	TTSAA	8 cut(s)	18, 625, 644, 664, 879, 1037, 1260, 1465
AjiI	CACGTC	1 cut(s)	1131
AjnI	CCWGG	3 cut(s)	95, 246, 775
AloI	GAACNNNNNNTCC	2 cut(s)	1140, 1172
Alw21I	GWGCWC	5 cut(s)	179, 298, 312, 402, 1053
Alw26I	GTCTC	1 cut(s)	1572
AlwI	GGATC	5 cut(s)	191, 204, 983, 1277, 1479
Ama87I	CYCGRG	1 cut(s)	363
AoxI	GGCC	5 cut(s)	249, 841, 977, 1192, 1532
ApeKI	GCWGC	3 cut(s)	44, 47, 1081
ApoI	RAATTY	5 cut(s)	209, 667, 1172, 1232, 1255
AspLEI	GCGC	2 cut(s)	802, 1402
AspS9I	GGNCC	4 cut(s)	635, 841, 978, 1210
AsuC2I	CCSGG	2 cut(s)	981, 1281
AsuHPI	GGTGA	3 cut(s)	682, 1549, 1606
AvaI	CYCGRG	1 cut(s)	363
AvaII	GGWCC	2 cut(s)	635, 1210
BaeGI	GKGCMC	1 cut(s)	857
BaeI	ACNNNNGTAYC	2 cut(s)	702, 735
BamHI	GGATCC	1 cut(s)	196
BanI	GGYRCC	1 cut(s)	718
BanII	GRGCYC	3 cut(s)	298, 402, 1053
BauI	CACGAG	1 cut(s)	1481
BbrPI	CACGTG	1 cut(s)	852
Bbv12I	GWGCWC	5 cut(s)	179, 298, 312, 402, 1053
BbvI	GCAGC	3 cut(s)	31, 59, 1068
BccI	CCATC	7 cut(s)	660, 761, 878, 913, 953, 1143, 1271
BceAI	ACGGC	1 cut(s)	828
BciT130I	CCWGG	3 cut(s)	97, 248, 777
BciVI	GTATCC	1 cut(s)	687
BcnI	CCSGG	2 cut(s)	981, 1281
BcoDI	GTCTC	1 cut(s)	1572
BfaI	CTAG	8 cut(s)	264, 359, 422, 587, 1161, 1305, 1487, 1553
BfmI	CTRYAG	4 cut(s)	45, 378, 1026, 1221
BfuI	GTATCC	1 cut(s)	687
BglII	AGATCT	1 cut(s)	1102
BisI	GCNGC	3 cut(s)	45, 48, 1082
BlpI	GCTNAGC	1 cut(s)	89
BlsI	GCNGC	3 cut(s)	46, 49, 1083
BmcAI	AGTACT	1 cut(s)	1303
Bme1390I	CCNGG	5 cut(s)	97, 248, 777, 981, 1281
Bme18I	GGWCC	2 cut(s)	635, 1210
BmeT110I	CYCGRG	1 cut(s)	363
BmgBI	CACGTC	1 cut(s)	1131
BmgT120I	GGNCC	4 cut(s)	635, 841, 978, 1210
BmiI	GGNNCC	5 cut(s)	198, 720, 741, 1211, 1212
BmrFI	CCNGG	5 cut(s)	97, 248, 777, 981, 1281
BmrI	ACTGGG	1 cut(s)	1061
BmsI	GCATC	2 cut(s)	229, 563
BmuI	ACTGGG	1 cut(s)	1061
Bpu1102I	GCTNAGC	1 cut(s)	89
BpuMI	CCSGG	2 cut(s)	981, 1281
BsaAI	YACGTR	2 cut(s)	852, 1339
BsaHI	GRCGYC	2 cut(s)	1181, 1581
BsaJI	CCNNGG	9 cut(s)	200, 252, 546, 714, 743, 823, 862, 1198, 1584
Bsc4I	CCNNNNNNNGG	6 cut(s)	253, 334, 863, 868, 1028, 1190
Bse118I	RCCGGY	1 cut(s)	1534
Bse1I	ACTGG	4 cut(s)	638, 1067, 1293, 1395
Bse3DI	GCAATG	1 cut(s)	938
BseBI	CCWGG	3 cut(s)	97, 248, 777
BseDI	CCNNGG	9 cut(s)	200, 252, 546, 714, 743, 823, 862, 1198, 1584
BseGI	GGATG	5 cut(s)	244, 554, 652, 785, 1154
BseLI	CCNNNNNNNGG	6 cut(s)	253, 334, 863, 868, 1028, 1190
BseMI	GCAATG	1 cut(s)	938
BseMII	CTCAG	1 cut(s)	843
BseNI	ACTGG	4 cut(s)	638, 1067, 1293, 1395
BseRI	GAGGAG	3 cut(s)	314, 600, 1608
BseSI	GKGCMC	1 cut(s)	857
BseXI	GCAGC	3 cut(s)	31, 59, 1068
BseYI	CCCAGC	1 cut(s)	566
BsgI	GTGCAG	1 cut(s)	806
Bsh1236I	CGCG	1 cut(s)	913
BshFI	GGCC	5 cut(s)	251, 843, 979, 1194, 1534
BshNI	GGYRCC	1 cut(s)	718
BsiHKAI	GWGCWC	5 cut(s)	179, 298, 312, 402, 1053
BsiHKCI	CYCGRG	1 cut(s)	363
BsiSI	CCGG	3 cut(s)	981, 1280, 1535
BslFI	GGGAC	1 cut(s)	1223
BslI	CCNNNNNNNGG	6 cut(s)	253, 334, 863, 868, 1028, 1190
BsmAI	GTCTC	1 cut(s)	1572
BsmBI	CGTCTC	1 cut(s)	1572
BsmFI	GGGAC	1 cut(s)	1223
BsmI	GAATGC	1 cut(s)	172
BsnI	GGCC	5 cut(s)	251, 843, 979, 1194, 1534
BsoBI	CYCGRG	1 cut(s)	363
Bsp1286I	GDGCHC	6 cut(s)	179, 298, 312, 402, 857, 1053
Bsp143I	GATC	5 cut(s)	196, 988, 1102, 1269, 1471
Bsp1720I	GCTNAGC	1 cut(s)	89
Bsp19I	CCATGG	3 cut(s)	714, 743, 862
BspANI	GGCC	5 cut(s)	251, 843, 979, 1194, 1534
BspCNI	CTCAG	1 cut(s)	842
BspFNI	CGCG	1 cut(s)	913
BspHI	TCATGA	1 cut(s)	1425
BspLI	GGNNCC	5 cut(s)	198, 720, 741, 1211, 1212
BspMAI	CTGCAG	2 cut(s)	49, 1030
BspPI	GGATC	5 cut(s)	191, 204, 983, 1277, 1479
BspT107I	GGYRCC	1 cut(s)	718
BsrDI	GCAATG	1 cut(s)	938
BsrFI	RCCGGY	1 cut(s)	1534
BsrI	ACTGG	4 cut(s)	638, 1067, 1293, 1395
BssAI	RCCGGY	1 cut(s)	1534
BssECI	CCNNGG	9 cut(s)	200, 252, 546, 714, 743, 823, 862, 1198, 1584
BssMI	GATC	5 cut(s)	196, 988, 1102, 1269, 1471
BssNI	GRCGYC	2 cut(s)	1181, 1581
BssSI	CACGAG	1 cut(s)	1481
BssT1I	CCWWGG	7 cut(s)	200, 252, 714, 743, 862, 1198, 1584
Bst2BI	CACGAG	1 cut(s)	1481
Bst2UI	CCWGG	3 cut(s)	97, 248, 777
Bst4CI	ACNGT	3 cut(s)	279, 388, 1311
BstACI	GRCGYC	2 cut(s)	1181, 1581
BstAPI	GCANNNNNTGC	1 cut(s)	307
BstBAI	YACGTR	2 cut(s)	852, 1339
BstC8I	GCNNGC	4 cut(s)	294, 312, 402, 811
BstDEI	CTNAG	4 cut(s)	89, 222, 829, 1475
BstDSI	CCRYGG	3 cut(s)	714, 743, 862
BstENI	CCTNNNNNAGG	1 cut(s)	1026
BstF5I	GGATG	5 cut(s)	244, 554, 652, 785, 1154
BstFNI	CGCG	1 cut(s)	913
BstHHI	GCGC	2 cut(s)	802, 1402
BstKTI	GATC	5 cut(s)	199, 991, 1105, 1272, 1474
BstMAI	GTCTC	1 cut(s)	1572
BstMBI	GATC	5 cut(s)	196, 988, 1102, 1269, 1471
BstMWI	GCNNNNNNNGC	7 cut(s)	20, 44, 248, 298, 307, 806, 910
BstNI	CCWGG	3 cut(s)	97, 248, 777
BstNSI	RCATGY	1 cut(s)	894
BstSCI	CCNGG	5 cut(s)	95, 246, 775, 979, 1279
BstSFI	CTRYAG	4 cut(s)	45, 378, 1026, 1221
BstSLI	GKGCMC	1 cut(s)	857
BstUI	CGCG	1 cut(s)	913
BstV1I	GCAGC	3 cut(s)	31, 59, 1068
BstX2I	RGATCY	4 cut(s)	196, 1102, 1269, 1471
BstXI	CCANNNNNNTGG	1 cut(s)	475
BstYI	RGATCY	4 cut(s)	196, 1102, 1269, 1471
BsuI	GTATCC	1 cut(s)	687
BsuRI	GGCC	5 cut(s)	251, 843, 979, 1194, 1534
BtgI	CCRYGG	3 cut(s)	714, 743, 862
BtrI	CACGTC	1 cut(s)	1131
BtsCI	GGATG	5 cut(s)	244, 554, 652, 785, 1154
BtsIMutI	CAGTG	4 cut(s)	693, 1074, 1316, 1388
Cac8I	GCNNGC	4 cut(s)	294, 312, 402, 811
CciI	TCATGA	1 cut(s)	1425
CfoI	GCGC	2 cut(s)	802, 1402
Cfr10I	RCCGGY	1 cut(s)	1534
Cfr13I	GGNCC	4 cut(s)	635, 841, 978, 1210
CseI	GACGC	2 cut(s)	1189, 1589
Csp6I	GTAC	3 cut(s)	384, 1302, 1564
CviQI	GTAC	3 cut(s)	384, 1302, 1564
DdeI	CTNAG	4 cut(s)	89, 222, 829, 1475
DpnI	GATC	5 cut(s)	198, 990, 1104, 1271, 1473
DpnII	GATC	5 cut(s)	196, 988, 1102, 1269, 1471
DraIII	CACNNNGTG	1 cut(s)	925
DrdI	GACNNNNNNGTC	1 cut(s)	1186
DseDI	GACNNNNNNGTC	1 cut(s)	1186
EaeI	YGGCCR	1 cut(s)	1532
Ecl136II	GAGCTC	3 cut(s)	296, 400, 1051
Eco130I	CCWWGG	7 cut(s)	200, 252, 714, 743, 862, 1198, 1584
Eco147I	AGGCCT	1 cut(s)	251
Eco24I	GRGCYC	3 cut(s)	298, 402, 1053
Eco47I	GGWCC	2 cut(s)	635, 1210
Eco53kI	GAGCTC	3 cut(s)	296, 400, 1051
Eco57I	CTGAAG	1 cut(s)	1430
Eco72I	CACGTG	1 cut(s)	852
Eco88I	CYCGRG	1 cut(s)	363
EcoICRI	GAGCTC	3 cut(s)	296, 400, 1051
EcoNI	CCTNNNNNAGG	1 cut(s)	1026
EcoO109I	RGGNCCY	1 cut(s)	1210
EcoRII	CCWGG	3 cut(s)	95, 246, 775
EcoT14I	CCWWGG	7 cut(s)	200, 252, 714, 743, 862, 1198, 1584
EcoT38I	GRGCYC	3 cut(s)	298, 402, 1053
ErhI	CCWWGG	7 cut(s)	200, 252, 714, 743, 862, 1198, 1584
Esp3I	CGTCTC	1 cut(s)	1572
FaqI	GGGAC	1 cut(s)	1223
FauNDI	CATATG	1 cut(s)	1543
Fnu4HI	GCNGC	3 cut(s)	45, 48, 1082
FokI	GGATG	5 cut(s)	251, 541, 639, 792, 1161
FriOI	GRGCYC	3 cut(s)	298, 402, 1053
Fsp4HI	GCNGC	3 cut(s)	45, 48, 1082
FspAI	RTGCGCAY	1 cut(s)	801
FspBI	CTAG	8 cut(s)	264, 359, 422, 587, 1161, 1305, 1487, 1553
FspI	TGCGCA	1 cut(s)	801
GlaI	GCGC	2 cut(s)	801, 1401
GluI	GCNGC	3 cut(s)	45, 48, 1082
GsaI	CCCAGC	1 cut(s)	570
HaeIII	GGCC	5 cut(s)	251, 843, 979, 1194, 1534
HapII	CCGG	3 cut(s)	981, 1280, 1535
HgaI	GACGC	2 cut(s)	1189, 1589
HhaI	GCGC	2 cut(s)	802, 1402
Hin1I	GRCGYC	2 cut(s)	1181, 1581
Hin6I	GCGC	2 cut(s)	800, 1400
HinP1I	GCGC	2 cut(s)	800, 1400
HincII	GTYRAC	1 cut(s)	1493
HindII	GTYRAC	1 cut(s)	1493
HindIII	AAGCTT	2 cut(s)	86, 619
HinfI	GANTC	2 cut(s)	4, 590
HpaII	CCGG	3 cut(s)	981, 1280, 1535
HphI	GGTGA	3 cut(s)	682, 1549, 1606
Hpy166II	GTNNAC	3 cut(s)	343, 1134, 1493
Hpy188I	TCNGA	4 cut(s)	140, 151, 454, 547
Hpy8I	GTNNAC	3 cut(s)	343, 1134, 1493
HpyAV	CCTTC	9 cut(s)	94, 570, 697, 1016, 1020, 1138, 1286, 1359, 1621
HpyCH4III	ACNGT	3 cut(s)	279, 388, 1311
HpyCH4IV	ACGT	7 cut(s)	345, 627, 851, 1130, 1187, 1338, 1416
HpyCH4V	TGCA	6 cut(s)	47, 75, 242, 412, 787, 1028
HpyF10VI	GCNNNNNNNGC	7 cut(s)	20, 44, 248, 298, 307, 806, 910
HpyF3I	CTNAG	4 cut(s)	89, 222, 829, 1475
HpySE526I	ACGT	7 cut(s)	345, 627, 851, 1130, 1187, 1338, 1416
Hsp92I	GRCGYC	2 cut(s)	1181, 1581
HspAI	GCGC	2 cut(s)	800, 1400
KflI	GGGWCCC	1 cut(s)	1210
Kzo9I	GATC	5 cut(s)	196, 988, 1102, 1269, 1471
LmnI	GCTCC	4 cut(s)	174, 327, 397, 1120
Lsp1109I	GCAGC	3 cut(s)	31, 59, 1068
LweI	GCATC	2 cut(s)	229, 563
MaeI	CTAG	8 cut(s)	264, 359, 422, 587, 1161, 1305, 1487, 1553
MaeII	ACGT	7 cut(s)	345, 627, 851, 1130, 1187, 1338, 1416
MaeIII	GTNAC	3 cut(s)	519, 1386, 1537
MalI	GATC	5 cut(s)	198, 990, 1104, 1271, 1473
MboI	GATC	5 cut(s)	196, 988, 1102, 1269, 1471
MboII	GAAGA	9 cut(s)	172, 175, 428, 509, 534, 676, 940, 1316, 1344
MflI	RGATCY	4 cut(s)	196, 1102, 1269, 1471
MhlI	GDGCHC	6 cut(s)	179, 298, 312, 402, 857, 1053
MluCI	AATT	8 cut(s)	209, 482, 500, 667, 1172, 1232, 1255, 1528
MlyI	GAGTC	1 cut(s)	13
MmeI	TCCRAC	1 cut(s)	456
MseI	TTAA	2 cut(s)	933, 1627
MslI	CAYNNNNRTG	1 cut(s)	943
MspA1I	CMGCKG	1 cut(s)	44
MspI	CCGG	3 cut(s)	981, 1280, 1535
MspR9I	CCNGG	5 cut(s)	97, 248, 777, 981, 1281
Mva1269I	GAATGC	1 cut(s)	172
MvaI	CCWGG	3 cut(s)	97, 248, 777
MvnI	CGCG	1 cut(s)	913
MwoI	GCNNNNNNNGC	7 cut(s)	20, 44, 248, 298, 307, 806, 910
NciI	CCSGG	2 cut(s)	981, 1281
NcoI	CCATGG	3 cut(s)	714, 743, 862
NdeI	CATATG	1 cut(s)	1543
NdeII	GATC	5 cut(s)	196, 988, 1102, 1269, 1471
NlaIV	GGNNCC	5 cut(s)	198, 720, 741, 1211, 1212
NmeAIII	GCCGAG	3 cut(s)	277, 804, 1072
NmuCI	GTSAC	2 cut(s)	1386, 1537
NsbI	TGCGCA	1 cut(s)	801
NspI	RCATGY	1 cut(s)	894
PagI	TCATGA	1 cut(s)	1425
PceI	AGGCCT	1 cut(s)	251
PciI	ACATGT	1 cut(s)	890
PcsI	WCGNNNNNNNCGW	1 cut(s)	1050
PctI	GAATGC	1 cut(s)	172
PfeI	GAWTC	1 cut(s)	590
PflMI	CCANNNNNTGG	1 cut(s)	253
PkrI	GCNGC	3 cut(s)	46, 49, 1083
PleI	GAGTC	1 cut(s)	12
PmaCI	CACGTG	1 cut(s)	852
PmlI	CACGTG	1 cut(s)	852
PpsI	GAGTC	1 cut(s)	12
Ppu21I	YACGTR	2 cut(s)	852, 1339
PpuMI	RGGWCCY	1 cut(s)	1210
PscI	ACATGT	1 cut(s)	890
Psp124BI	GAGCTC	3 cut(s)	298, 402, 1053
Psp1406I	AACGTT	1 cut(s)	627
Psp5II	RGGWCCY	1 cut(s)	1210
Psp6I	CCWGG	3 cut(s)	95, 246, 775
PspCI	CACGTG	1 cut(s)	852
PspFI	CCCAGC	1 cut(s)	566
PspGI	CCWGG	3 cut(s)	95, 246, 775
PspN4I	GGNNCC	5 cut(s)	198, 720, 741, 1211, 1212
PspPI	GGNCC	4 cut(s)	635, 841, 978, 1210
PspPPI	RGGWCCY	1 cut(s)	1210
PstI	CTGCAG	2 cut(s)	49, 1030
PsuI	RGATCY	4 cut(s)	196, 1102, 1269, 1471
PvuII	CAGCTG	1 cut(s)	44
RsaI	GTAC	3 cut(s)	385, 1303, 1565
RsaNI	GTAC	3 cut(s)	384, 1302, 1564
RseI	CAYNNNNRTG	1 cut(s)	943
SacI	GAGCTC	3 cut(s)	298, 402, 1053
SaqAI	TTAA	2 cut(s)	933, 1627
SatI	GCNGC	3 cut(s)	45, 48, 1082
Sau3AI	GATC	5 cut(s)	196, 988, 1102, 1269, 1471
Sau96I	GGNCC	4 cut(s)	635, 841, 978, 1210
SbfI	CCTGCAGG	1 cut(s)	1030
ScaI	AGTACT	1 cut(s)	1303
SchI	GAGTC	1 cut(s)	13
ScrFI	CCNGG	5 cut(s)	97, 248, 777, 981, 1281
SdaI	CCTGCAGG	1 cut(s)	1030
SduI	GDGCHC	6 cut(s)	179, 298, 312, 402, 857, 1053
SfaNI	GCATC	2 cut(s)	229, 563
SfcI	CTRYAG	4 cut(s)	45, 378, 1026, 1221
SinI	GGWCC	2 cut(s)	635, 1210
SmiMI	CAYNNNNRTG	1 cut(s)	943
Sse8387I	CCTGCAGG	1 cut(s)	1030
Sse9I	AATT	8 cut(s)	209, 482, 500, 667, 1172, 1232, 1255, 1528
SseBI	AGGCCT	1 cut(s)	251
SspMI	CTAG	8 cut(s)	264, 359, 422, 587, 1161, 1305, 1487, 1553
SstI	GAGCTC	3 cut(s)	298, 402, 1053
StuI	AGGCCT	1 cut(s)	251
StyD4I	CCNGG	5 cut(s)	95, 246, 775, 979, 1279
StyI	CCWWGG	7 cut(s)	200, 252, 714, 743, 862, 1198, 1584
TaaI	ACNGT	3 cut(s)	279, 388, 1311
TaiI	ACGT	7 cut(s)	348, 630, 854, 1133, 1190, 1341, 1419
TaqI	TCGA	6 cut(s)	121, 206, 613, 951, 1237, 1355
TasI	AATT	8 cut(s)	209, 482, 500, 667, 1172, 1232, 1255, 1528
TatI	WGTACW	1 cut(s)	1301
TfiI	GAWTC	1 cut(s)	590
Tru1I	TTAA	2 cut(s)	933, 1627
Tru9I	TTAA	2 cut(s)	933, 1627
TscAI	CASTG	4 cut(s)	700, 1074, 1316, 1395
TseFI	GTSAC	2 cut(s)	1386, 1537
TseI	GCWGC	3 cut(s)	44, 47, 1081
Tsp45I	GTSAC	2 cut(s)	1386, 1537
TspDTI	ATGAA	6 cut(s)	345, 434, 1316, 1414, 1442, 1520
TspGWI	ACGGA	1 cut(s)	984
TspRI	CASTG	4 cut(s)	700, 1074, 1316, 1395
Van91I	CCANNNNNTGG	1 cut(s)	253
VpaK11BI	GGWCC	2 cut(s)	635, 1210
XagI	CCTNNNNNAGG	1 cut(s)	1026
XapI	RAATTY	5 cut(s)	209, 667, 1172, 1232, 1255
XbaI	TCTAGA	1 cut(s)	586
XceI	RCATGY	1 cut(s)	894
XspI	CTAG	8 cut(s)	264, 359, 422, 587, 1161, 1305, 1487, 1553
ZrmI	AGTACT	1 cut(s)	1303

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.