Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0006821

Physical Location & Seq

Genomic Coordinates Forward (+)

56239940 .. 56243077

Gene Structure 3138 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G032130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGTTGTGTCTGTCAGCTTCAAACGCCATGAGCATAGTTGCCACAGCTGCAGCGCTATCTTTACCTATCTCTTTTTGCAGATCATCAAAGCTTAGCACCAAGAAGGGCGTAAAAGGATTTCGGGTTTTCGCTGTGTTGGGAGAGGAGTCAGGGGTAGATAAGAAGCATGCTTGGAGCTCACTCTTTGATGTGGAGGATCCAAGGCCTAAAAATCCAAAATTAGAAGGGAAGGTCTTGAAGGCAGCTCAGGCCTTGGAAGTTGCTAGATTTGATATACAATACTGTGATTGGCGCGCTCGACAAGATGTGCTAACAATCATGCTCCTCCATGAAAAGGTTGTGGAAGTTCTAAATCCTCTTGCCCGTGAGTACAAGTCTATCGGCACCATCAAGAAGGAGCTTGCAGAGTTGCAAGAAGAACTAGGACAGGCTCATAAAGAGGTTCATATCTCTGAAGCAAGAGTTGCTACTGCTTTAGATAAATTGGCTTTCATGGAAGAATTGGTGAATGATAAGCTGTTACAAGACAGGAACACTACTGATGCTGAGCAAGCATCCCCTTCTCCCAGTACTTCTACACAATCTTTGGATGCTGTAAAAAGGAGGAGGTCTCGGAAAGGCTTGAATGTTTCAGGTCCAGTTCAAACCTACCATCCCCGATTGAAGAATTTTTGGTACCCTGTTGCCTTCTCCACTAACCTTAAGGATGATACCATGGTAAGCTGCTCTCATTTCTTCTTCATTAGCTCTAAAAGCAGCAGTCCAATTGATTGTTTTGAGGAACCATGGGTTCTCTTTCGTGGAAAAGATGGGAAACCTGGATGTGTTCGGAATACCTGTGCACATAGAGCTTGCCCTCTTGACCTCGGTACAGTAAAAGATGGCCGTATTGCATGTCCATATCATGGATGGGAGTACTCAACTGATGGAAAATGTGAGAAGATGCCATCCACAAAATTACGCAATGTGAAGATTAAAGCATTGCCATGTTTTGAGCAAGATGGGATGTTATGGATTTGGCCTGGTGATGACGCTCCAACAGCCACTATTCCTTCTTTACAACCTCCTGCAGGATTTCAAATCCATGCTGAGCTGGTAATAGAACTCCCAGTGGAACATGGATTACTTCTGGATAATCTTTTAGATCTTGCGCATGCTCCTTTTACTCATACGTCCACCTTTGCCAAGGGATGGAGCGTTCCGAGCTTTGTGAAATTTTTGACACCTGCGTCCGGCCTGCAAGGGTATTGGGACCCTTATCCTATTGATATGGAATTTCGACCACCTTGTATGGTACTCTCAACCATCGGGATCTCAAAGCCGGGAAAACTAGAAGGGCAGAGTACAAAGCAGTGCAGCACGCATCTTCATCAACTTCATGTGTGCTTACCTTCTTCTAGAAACAAAACAAGGTTACTATACAGAATGTCACTGGATTTTGCGCCTGTACTGAAGCACATTCCTTTCATGCACGTTTTGAATGAGGATCTAAGGCTTGTCCTTGGCCAACAAGAGCGCATGAACTGCGGGGAAAATGTCTGGAGTTGTCCTGTAACATACGACAAGCTAGGAGTGAGGTACAGGCTATGGAGGGAGGCTGTTGAACAAGGAATTAAGCAACTACCCTTCACAACCAAATCAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006779 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009706 GO:0009941 GO:0009987 GO:0010277 GO:0015994 GO:0015995 GO:0016020 GO:0016491 GO:0016701 GO:0016703 GO:0018130 GO:0019438 GO:0019866 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0033013 GO:0033014 GO:0034357 GO:0034641 GO:0042170 GO:0042440 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046148 GO:0046483 GO:0051186 GO:0051188 GO:0055035 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00860 ko01100 ko01110 map00860 map01100 map01110

Pfam Domains

Protein Families

PaO Rieske

Protein Analysis

548

Amino Acids

61.42

Weight (kDa)

8.64

Isoelectric Point (pI)

48.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rieske	PF00355	253 - 319	2.3e-20	Rieske [2Fe-2S] domain
PaO	PF08417	426 - 512	7.4e-14	Pheophorbide a oxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44446 AT1G44446 AT1G44446 AT1G44446
fragaria_vesca	FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000
malus_domestica	MD08G1162200.v1.1 MD15G1347600.v1.1
prunus_persica	Prupe.1G495400_v2.0.a1
pyrus_communis	pycom08g14010 pycom15g31160
rosa_chinensis	RchiOBHm_Chr6g0295881
rosa_laevigata	RLG00000011760
rosa_multiflora	Rmu_sc0003139.1_g000003
rosa_roxburghii	Rroxscaffold_7G00172090
rosa_rugosa	Rorug06G0255000
rosa_samantha	Rh6AG368500 Rh6BG376300 Rh6CG382400 Rh6DG369000
rosa_wichuraiana	Rw6G032130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1234
AasI	GACNNNNNNGTC	1 cut(s)	1228
Acc16I	TGCGCA	1 cut(s)	1152
Acc36I	ACCTGC	1 cut(s)	1234
Acc65I	GGTACC	1 cut(s)	675
AccB1I	GGYRCC	2 cut(s)	383, 675
AccB7I	CCANNNNNTGG	2 cut(s)	905, 1191
AccII	CGCG	1 cut(s)	294
AciI	CCGC	1 cut(s)	1527
AclWI	GGATC	4 cut(s)	191, 204, 1319, 1494
AcoI	YGGCCR	2 cut(s)	883, 1504
AcsI	RAATTY	3 cut(s)	667, 1214, 1274
AcuI	CTGAAG	2 cut(s)	474, 1472
AfaI	GTAC	9 cut(s)	371, 571, 677, 871, 917, 1296, 1345, 1449, 1580
AfeI	AGCGCT	1 cut(s)	54
AfiI	CCNNNNNNNGG	5 cut(s)	334, 905, 1070, 1191, 1232
AflII	CTTAAG	1 cut(s)	701
AgsI	TTSAA	8 cut(s)	21, 238, 625, 644, 664, 1079, 1480, 1604
AjnI	CCWGG	2 cut(s)	817, 1021
AloI	GAACNNNNNNTCC	2 cut(s)	1182, 1214
Alw21I	GWGCWC	2 cut(s)	179, 844
Alw26I	GTCTC	1 cut(s)	615
Alw44I	GTGCAC	1 cut(s)	840
AlwI	GGATC	4 cut(s)	191, 204, 1319, 1494
Aor51HI	AGCGCT	1 cut(s)	54
AoxI	GGCC	6 cut(s)	203, 249, 883, 1019, 1234, 1504
ApaLI	GTGCAC	1 cut(s)	840
ApeKI	GCWGC	6 cut(s)	47, 50, 242, 723, 756, 1356
ApoI	RAATTY	3 cut(s)	667, 1214, 1274
Asp718I	GGTACC	1 cut(s)	675
AspLEI	GCGC	6 cut(s)	55, 294, 296, 1153, 1444, 1518
AspS9I	GGNCC	2 cut(s)	635, 1252
AsuC2I	CCSGG	1 cut(s)	1323
AsuHPI	GGTGA	2 cut(s)	517, 1037
AvaII	GGWCC	2 cut(s)	635, 1252
BaeGI	GKGCMC	1 cut(s)	844
BaeI	ACNNNNGTAYC	2 cut(s)	702, 735
BalI	TGGCCA	1 cut(s)	1506
BamHI	GGATCC	1 cut(s)	196
BanI	GGYRCC	2 cut(s)	383, 675
BanII	GRGCYC	1 cut(s)	179
Bbv12I	GWGCWC	2 cut(s)	179, 844
BbvI	GCAGC	6 cut(s)	34, 62, 254, 710, 768, 1368
BceAI	ACGGC	1 cut(s)	870
BciT130I	CCWGG	2 cut(s)	819, 1023
BcnI	CCSGG	1 cut(s)	1323
BcoDI	GTCTC	1 cut(s)	615
BfaI	CTAG	5 cut(s)	264, 422, 1331, 1398, 1568
BfmI	CTRYAG	2 cut(s)	48, 1068
BfoI	RGCGCY	1 cut(s)	56
BfrI	CTTAAG	1 cut(s)	701
BfuAI	ACCTGC	1 cut(s)	1234
BglII	AGATCT	1 cut(s)	1144
BisI	GCNGC	6 cut(s)	48, 51, 243, 724, 757, 1357
BlpI	GCTNAGC	3 cut(s)	92, 546, 1089
BlsI	GCNGC	6 cut(s)	49, 52, 244, 725, 758, 1358
BmcAI	AGTACT	2 cut(s)	571, 917
Bme1390I	CCNGG	3 cut(s)	819, 1023, 1323
Bme18I	GGWCC	2 cut(s)	635, 1252
BmgT120I	GGNCC	2 cut(s)	635, 1252
BmiI	GGNNCC	6 cut(s)	198, 385, 677, 783, 1253, 1254
BmrFI	CCNGG	3 cut(s)	819, 1023, 1323
BmrI	ACTGGG	2 cut(s)	561, 1103
BmsI	GCATC	5 cut(s)	532, 563, 580, 933, 1372
BmuI	ACTGGG	2 cut(s)	561, 1103
BplI	GAGNNNNNCTC	2 cut(s)	595, 627
BpmI	CTGGAG	1 cut(s)	1561
Bpu10I	CCTNAGC	1 cut(s)	246
Bpu1102I	GCTNAGC	3 cut(s)	92, 546, 1089
BpuMI	CCSGG	1 cut(s)	1323
BsaI	GGTCTC	1 cut(s)	615
BsaJI	CCNNGG	7 cut(s)	200, 252, 714, 785, 865, 1185, 1501
Bsc4I	CCNNNNNNNGG	5 cut(s)	334, 905, 1070, 1191, 1232
Bse1I	ACTGG	4 cut(s)	567, 638, 1109, 1437
Bse3DI	GCAATG	2 cut(s)	970, 980
BseBI	CCWGG	2 cut(s)	819, 1023
BseDI	CCNNGG	7 cut(s)	200, 252, 714, 785, 865, 1185, 1501
BseGI	GGATG	9 cut(s)	554, 595, 652, 712, 827, 914, 947, 1011, 1196
BseLI	CCNNNNNNNGG	5 cut(s)	334, 905, 1070, 1191, 1232
BseMI	GCAATG	2 cut(s)	970, 980
BseMII	CTCAG	3 cut(s)	260, 537, 1080
BseNI	ACTGG	4 cut(s)	567, 638, 1109, 1437
BsePI	GCGCGC	1 cut(s)	292
BseRI	GAGGAG	3 cut(s)	158, 314, 619
BseSI	GKGCMC	1 cut(s)	844
BseXI	GCAGC	6 cut(s)	34, 62, 254, 710, 768, 1368
BsgI	GTGCAG	1 cut(s)	1375
Bsh1236I	CGCG	1 cut(s)	294
BshFI	GGCC	6 cut(s)	205, 251, 885, 1021, 1236, 1506
BshNI	GGYRCC	2 cut(s)	383, 675
BsiHKAI	GWGCWC	2 cut(s)	179, 844
BsiSI	CCGG	2 cut(s)	1233, 1322
BslFI	GGGAC	1 cut(s)	1265
BslI	CCNNNNNNNGG	5 cut(s)	334, 905, 1070, 1191, 1232
BsmAI	GTCTC	1 cut(s)	615
BsmFI	GGGAC	1 cut(s)	1265
BsnI	GGCC	6 cut(s)	205, 251, 885, 1021, 1236, 1506
Bso31I	GGTCTC	1 cut(s)	615
Bsp1286I	GDGCHC	2 cut(s)	179, 844
Bsp143I	GATC	5 cut(s)	80, 196, 1144, 1311, 1486
Bsp1720I	GCTNAGC	3 cut(s)	92, 546, 1089
Bsp19I	CCATGG	2 cut(s)	714, 785
BspACI	CCGC	1 cut(s)	1527
BspANI	GGCC	6 cut(s)	205, 251, 885, 1021, 1236, 1506
BspCNI	CTCAG	3 cut(s)	259, 538, 1081
BspFNI	CGCG	1 cut(s)	294
BspLI	GGNNCC	6 cut(s)	198, 385, 677, 783, 1253, 1254
BspMAI	CTGCAG	2 cut(s)	52, 1072
BspMI	ACCTGC	1 cut(s)	1234
BspPI	GGATC	4 cut(s)	191, 204, 1319, 1494
BspT107I	GGYRCC	2 cut(s)	383, 675
BspTI	CTTAAG	1 cut(s)	701
BspTNI	GGTCTC	1 cut(s)	615
BsrDI	GCAATG	2 cut(s)	970, 980
BsrI	ACTGG	4 cut(s)	567, 638, 1109, 1437
BssECI	CCNNGG	7 cut(s)	200, 252, 714, 785, 865, 1185, 1501
BssHII	GCGCGC	1 cut(s)	292
BssMI	GATC	5 cut(s)	80, 196, 1144, 1311, 1486
BssT1I	CCWWGG	6 cut(s)	200, 252, 714, 785, 1185, 1501
Bst2UI	CCWGG	2 cut(s)	819, 1023
Bst4CI	ACNGT	2 cut(s)	284, 874
BstAFI	CTTAAG	1 cut(s)	701
BstAPI	GCANNNNNTGC	2 cut(s)	464, 1524
BstC8I	GCNNGC	8 cut(s)	168, 294, 402, 552, 853, 1155, 1238, 1361
BstDEI	CTNAG	5 cut(s)	92, 246, 546, 1089, 1490
BstDSI	CCRYGG	2 cut(s)	714, 785
BstENI	CCTNNNNNAGG	1 cut(s)	1068
BstF5I	GGATG	9 cut(s)	554, 595, 652, 712, 827, 914, 947, 1011, 1196
BstFNI	CGCG	1 cut(s)	294
BstH2I	RGCGCY	1 cut(s)	56
BstHHI	GCGC	6 cut(s)	55, 294, 296, 1153, 1444, 1518
BstKTI	GATC	5 cut(s)	83, 199, 1147, 1314, 1489
BstMAI	GTCTC	1 cut(s)	615
BstMBI	GATC	5 cut(s)	80, 196, 1144, 1311, 1486
BstNI	CCWGG	2 cut(s)	819, 1023
BstNSI	RCATGY	3 cut(s)	170, 897, 1157
BstSCI	CCNGG	3 cut(s)	817, 1021, 1321
BstSFI	CTRYAG	2 cut(s)	48, 1068
BstSLI	GKGCMC	1 cut(s)	844
BstUI	CGCG	1 cut(s)	294
BstV1I	GCAGC	6 cut(s)	34, 62, 254, 710, 768, 1368
BstX2I	RGATCY	4 cut(s)	196, 1144, 1311, 1486
BstYI	RGATCY	4 cut(s)	196, 1144, 1311, 1486
BsuRI	GGCC	6 cut(s)	205, 251, 885, 1021, 1236, 1506
BtgI	CCRYGG	2 cut(s)	714, 785
BtsCI	GGATG	9 cut(s)	554, 595, 652, 712, 827, 914, 947, 1011, 1196
BtsI	GCAGTG	1 cut(s)	1358
BtsIMutI	CAGTG	3 cut(s)	1116, 1358, 1430
BveI	ACCTGC	1 cut(s)	1234
Cac8I	GCNNGC	8 cut(s)	168, 294, 402, 552, 853, 1155, 1238, 1361
CfoI	GCGC	6 cut(s)	55, 294, 296, 1153, 1444, 1518
Cfr13I	GGNCC	2 cut(s)	635, 1252
CseI	GACGC	2 cut(s)	1040, 1218
Csp6I	GTAC	9 cut(s)	370, 570, 676, 870, 916, 1295, 1344, 1448, 1579
CviQI	GTAC	9 cut(s)	370, 570, 676, 870, 916, 1295, 1344, 1448, 1579
DdeI	CTNAG	5 cut(s)	92, 246, 546, 1089, 1490
DpnI	GATC	5 cut(s)	82, 198, 1146, 1313, 1488
DpnII	GATC	5 cut(s)	80, 196, 1144, 1311, 1486
DrdI	GACNNNNNNGTC	1 cut(s)	1228
DseDI	GACNNNNNNGTC	1 cut(s)	1228
EaeI	YGGCCR	2 cut(s)	883, 1504
Ecl136II	GAGCTC	1 cut(s)	177
Eco130I	CCWWGG	6 cut(s)	200, 252, 714, 785, 1185, 1501
Eco147I	AGGCCT	2 cut(s)	205, 251
Eco24I	GRGCYC	1 cut(s)	179
Eco31I	GGTCTC	1 cut(s)	615
Eco47I	GGWCC	2 cut(s)	635, 1252
Eco47III	AGCGCT	1 cut(s)	54
Eco53kI	GAGCTC	1 cut(s)	177
Eco57I	CTGAAG	2 cut(s)	474, 1472
EcoICRI	GAGCTC	1 cut(s)	177
EcoNI	CCTNNNNNAGG	1 cut(s)	1068
EcoO109I	RGGNCCY	1 cut(s)	1252
EcoRII	CCWGG	2 cut(s)	817, 1021
EcoT14I	CCWWGG	6 cut(s)	200, 252, 714, 785, 1185, 1501
EcoT38I	GRGCYC	1 cut(s)	179
ErhI	CCWWGG	6 cut(s)	200, 252, 714, 785, 1185, 1501
FaqI	GGGAC	1 cut(s)	1265
FauI	CCCGC	1 cut(s)	1520
Fnu4HI	GCNGC	6 cut(s)	48, 51, 243, 724, 757, 1357
FokI	GGATG	9 cut(s)	541, 602, 639, 719, 834, 921, 934, 1018, 1203
FriOI	GRGCYC	1 cut(s)	179
Fsp4HI	GCNGC	6 cut(s)	48, 51, 243, 724, 757, 1357
FspBI	CTAG	5 cut(s)	264, 422, 1331, 1398, 1568
FspI	TGCGCA	1 cut(s)	1152
GlaI	GCGC	6 cut(s)	54, 293, 295, 1152, 1443, 1517
GluI	GCNGC	6 cut(s)	48, 51, 243, 724, 757, 1357
GsuI	CTGGAG	1 cut(s)	1561
HaeII	RGCGCY	1 cut(s)	56
HaeIII	GGCC	6 cut(s)	205, 251, 885, 1021, 1236, 1506
HapII	CCGG	2 cut(s)	1233, 1322
HgaI	GACGC	2 cut(s)	1040, 1218
HhaI	GCGC	6 cut(s)	55, 294, 296, 1153, 1444, 1518
Hin6I	GCGC	6 cut(s)	53, 292, 294, 1151, 1442, 1516
HinP1I	GCGC	6 cut(s)	53, 292, 294, 1151, 1442, 1516
HindIII	AAGCTT	1 cut(s)	89
HinfI	GANTC	1 cut(s)	146
HpaII	CCGG	2 cut(s)	1233, 1322
HphI	GGTGA	2 cut(s)	517, 1037
Hpy166II	GTNNAC	2 cut(s)	842, 1176
Hpy188I	TCNGA	4 cut(s)	454, 615, 831, 1203
Hpy188III	TCNNGA	7 cut(s)	235, 391, 860, 1130, 1309, 1398, 1540
Hpy8I	GTNNAC	2 cut(s)	842, 1176
HpyCH4III	ACNGT	2 cut(s)	284, 874
HpyCH4IV	ACGT	2 cut(s)	1172, 1473
HpyF3I	CTNAG	5 cut(s)	92, 246, 546, 1089, 1490
HpySE526I	ACGT	2 cut(s)	1172, 1473
HspAI	GCGC	6 cut(s)	53, 292, 294, 1151, 1442, 1516
KflI	GGGWCCC	1 cut(s)	1252
KpnI	GGTACC	1 cut(s)	679
Kzo9I	GATC	5 cut(s)	80, 196, 1144, 1311, 1486
LmnI	GCTCC	6 cut(s)	174, 327, 397, 1039, 1162, 1194
Lsp1109I	GCAGC	6 cut(s)	34, 62, 254, 710, 768, 1368
LweI	GCATC	5 cut(s)	532, 563, 580, 933, 1372
MaeI	CTAG	5 cut(s)	264, 422, 1331, 1398, 1568
MaeII	ACGT	2 cut(s)	1172, 1473
MaeIII	GTNAC	4 cut(s)	519, 1413, 1428, 1552
MalI	GATC	5 cut(s)	82, 198, 1146, 1313, 1488
MboI	GATC	5 cut(s)	80, 196, 1144, 1311, 1486
MboII	GAAGA	9 cut(s)	428, 509, 676, 727, 730, 952, 982, 1358, 1386
MfeI	CAATTG	1 cut(s)	765
MflI	RGATCY	4 cut(s)	196, 1144, 1311, 1486
MhlI	GDGCHC	2 cut(s)	179, 844
MlsI	TGGCCA	1 cut(s)	1506
MluCI	AATT	9 cut(s)	218, 482, 500, 667, 765, 956, 1214, 1274, 1611
MluNI	TGGCCA	1 cut(s)	1506
MlyI	GAGTC	1 cut(s)	155
MmeI	TCCRAC	1 cut(s)	1061
Mox20I	TGGCCA	1 cut(s)	1506
MscI	TGGCCA	1 cut(s)	1506
MseI	TTAA	3 cut(s)	702, 975, 1614
MslI	CAYNNNNRTG	1 cut(s)	985
Msp20I	TGGCCA	1 cut(s)	1506
MspA1I	CMGCKG	1 cut(s)	47
MspCI	CTTAAG	1 cut(s)	701
MspI	CCGG	2 cut(s)	1233, 1322
MspR9I	CCNGG	3 cut(s)	819, 1023, 1323
MunI	CAATTG	1 cut(s)	765
MvaI	CCWGG	2 cut(s)	819, 1023
MvnI	CGCG	1 cut(s)	294
NciI	CCSGG	1 cut(s)	1323
NcoI	CCATGG	2 cut(s)	714, 785
NdeII	GATC	5 cut(s)	80, 196, 1144, 1311, 1486
NlaIV	GGNNCC	6 cut(s)	198, 385, 677, 783, 1253, 1254
NmuCI	GTSAC	1 cut(s)	1428
NsbI	TGCGCA	1 cut(s)	1152
NspI	RCATGY	3 cut(s)	170, 897, 1157
PaeI	GCATGC	2 cut(s)	170, 1157
PaqCI	CACCTGC	1 cut(s)	1234
PauI	GCGCGC	1 cut(s)	292
PceI	AGGCCT	2 cut(s)	205, 251
PflMI	CCANNNNNTGG	2 cut(s)	905, 1191
PkrI	GCNGC	6 cut(s)	49, 52, 244, 725, 758, 1358
PleI	GAGTC	1 cut(s)	154
PpsI	GAGTC	1 cut(s)	154
PpuMI	RGGWCCY	1 cut(s)	1252
Psp124BI	GAGCTC	1 cut(s)	179
Psp5II	RGGWCCY	1 cut(s)	1252
Psp6I	CCWGG	2 cut(s)	817, 1021
PspGI	CCWGG	2 cut(s)	817, 1021
PspN4I	GGNNCC	6 cut(s)	198, 385, 677, 783, 1253, 1254
PspPI	GGNCC	2 cut(s)	635, 1252
PspPPI	RGGWCCY	1 cut(s)	1252
PsrI	GAACNNNNNNTAC	2 cut(s)	1107, 1139
PstI	CTGCAG	2 cut(s)	52, 1072
PsuI	RGATCY	4 cut(s)	196, 1144, 1311, 1486
PteI	GCGCGC	1 cut(s)	292
PvuII	CAGCTG	1 cut(s)	47
RsaI	GTAC	9 cut(s)	371, 571, 677, 871, 917, 1296, 1345, 1449, 1580
RsaNI	GTAC	9 cut(s)	370, 570, 676, 870, 916, 1295, 1344, 1448, 1579
RseI	CAYNNNNRTG	1 cut(s)	985
SacI	GAGCTC	1 cut(s)	179
SaqAI	TTAA	3 cut(s)	702, 975, 1614
SatI	GCNGC	6 cut(s)	48, 51, 243, 724, 757, 1357
Sau3AI	GATC	5 cut(s)	80, 196, 1144, 1311, 1486
Sau96I	GGNCC	2 cut(s)	635, 1252
SbfI	CCTGCAGG	1 cut(s)	1072
ScaI	AGTACT	2 cut(s)	571, 917
SchI	GAGTC	1 cut(s)	155
ScrFI	CCNGG	3 cut(s)	819, 1023, 1323
SdaI	CCTGCAGG	1 cut(s)	1072
SduI	GDGCHC	2 cut(s)	179, 844
SfaNI	GCATC	5 cut(s)	532, 563, 580, 933, 1372
SfcI	CTRYAG	2 cut(s)	48, 1068
SinI	GGWCC	2 cut(s)	635, 1252
SmiMI	CAYNNNNRTG	1 cut(s)	985
SmlI	CTYRAG	1 cut(s)	701
SmoI	CTYRAG	1 cut(s)	701
SphI	GCATGC	2 cut(s)	170, 1157
Sse8387I	CCTGCAGG	1 cut(s)	1072
Sse9I	AATT	9 cut(s)	218, 482, 500, 667, 765, 956, 1214, 1274, 1611
SseBI	AGGCCT	2 cut(s)	205, 251
SsiI	CCGC	1 cut(s)	1527
SspMI	CTAG	5 cut(s)	264, 422, 1331, 1398, 1568
SstI	GAGCTC	1 cut(s)	179
StuI	AGGCCT	2 cut(s)	205, 251
StyD4I	CCNGG	3 cut(s)	817, 1021, 1321
StyI	CCWWGG	6 cut(s)	200, 252, 714, 785, 1185, 1501
TaaI	ACNGT	2 cut(s)	284, 874
TaiI	ACGT	2 cut(s)	1175, 1476
TaqI	TCGA	2 cut(s)	298, 1279
TasI	AATT	9 cut(s)	218, 482, 500, 667, 765, 956, 1214, 1274, 1611
TatI	WGTACW	5 cut(s)	369, 569, 915, 1343, 1447
Tru1I	TTAA	3 cut(s)	702, 975, 1614
Tru9I	TTAA	3 cut(s)	702, 975, 1614
TscAI	CASTG	3 cut(s)	1116, 1358, 1437
TseFI	GTSAC	1 cut(s)	1428
TseI	GCWGC	6 cut(s)	47, 50, 242, 723, 756, 1356
Tsp45I	GTSAC	1 cut(s)	1428
TspDTI	ATGAA	8 cut(s)	345, 434, 481, 730, 1358, 1367, 1456, 1535
TspRI	CASTG	3 cut(s)	1116, 1358, 1437
Van91I	CCANNNNNTGG	2 cut(s)	905, 1191
Vha464I	CTTAAG	1 cut(s)	701
VneI	GTGCAC	1 cut(s)	840
VpaK11BI	GGWCC	2 cut(s)	635, 1252
XagI	CCTNNNNNAGG	1 cut(s)	1068
XapI	RAATTY	3 cut(s)	667, 1214, 1274
XbaI	TCTAGA	1 cut(s)	1397
XceI	RCATGY	3 cut(s)	170, 897, 1157
XcmI	CCANNNNNNNNNTGG	1 cut(s)	906
XspI	CTAG	5 cut(s)	264, 422, 1331, 1398, 1568
ZrmI	AGTACT	2 cut(s)	571, 917

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.