Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0006821

Physical Location & Seq

Genomic Coordinates Reverse (-)

12408914 .. 12412031

Gene Structure 3118 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011760

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGAGCATAGTTGCCACAGCTGCAGCTCTATCTTTACCTATCTCTTTTTGCAGATCATCAAAGCTTAGCACCAAGAAGGGCGTGAAAGGATTTCGGGTTTTCGCTGTGTTGGGAGAGGAGTCGGGGGTAGATAAGAAGCATGCTTGGAGCTCACTCTTTGATGTGGAGGATCCAAGGCCTAAAAATCCAAAATTAGAAGGGAAGGTCTTGAAGGCAGCTCAGGCCTTGGAAGTTGCTAGATTTGATATACAATACTGTGATTGGCGCGCTCGACAAGATGTGCTAACAATCATGCTCCTCCATGAAAAGGTTGTGGAAGTTCTAAATCCTCTTGCCCGTGAGTACAAGTCTATCGGCACCATCAAGAAGGAGCTTGCAGAGTTGCAAGAAGAACTAGGACAGGCTCATAAAGAGGTTCATATATCTGAAGCAAGAGTTGCCACTGCTTTAGATAAATTGGCTTTCATGGAAGAATTGGTGAATGATAAGCTGTTACAAGACAGGAACACTACTGATGCTGAGCAAGCATCCCCTTCTCCCAGTACTTCTACACAATCTTTGGATGCTGTAAAAAGGAGGAGGTCTCGGAAAGGCTTGAATGTTTCAGGTCCAGTTCAAACCTACCATCCCCGATTGAAGAATTTTTGGTACCCTGTTGCCTTCTCCACTAACCTTAAGGATGATACCATGGTTCCAATTGATTGTTTTGAGGAACCATGGGTTCTCTTTCGTGGAAAAGATGGGAAACCGGGGTGTGTTCGGAATACCTGTGCACATAGAGCTTGCCCTCTTGACCTTGGTACAGTAAAAGATGGCCGTATTGCATGTCCATATCATGGATGGGAGTACTCAACTGATGGAAAATGTGAGAAGATGCCATCCACAAAATTACGCAATGTGAAGATTAAAGCATTGCCATGTTTTGAGCAAGATGGGATGTTATGGATTTGGCCTGGTGATGACCCTCCATCAGCCACTATTCCTTCTTTACAACCTCCTGCAGGATTTCAAATCCATGCTGAGCTGGTAATAGAACTCCCAGTGGAACATGGATTACTTCTGGATAATCTTTTAGATCTTGCGCATGCTCCTTTTACTCATACGTCCACCTTTGCCAAGGGATGGAGCGTTCCGAGCTTTGTGAAATTTTTGACACCTGCGTCCGGCCTGCAAGGGTATTGGGACCCTTATCCTATTGATATGGAATTTCGACCACCTTGTATGGTACTCTCAACCATTGGGATCTCAAAGCCGGGAAAACTAGAAGGGCAGAGTACAAAGCAGTGTAGCACACATCTTCATCAACTTCATGTGTGCTTACCTTCTTCTAGAAACAAAACAAGGTTACTATACAGAATGTCACTGGATTTTGCGCCCGTACTGAAGCACATTCCTTTCATGCACGTTTTATGGAGGCATTTTGCAGAGCAGGTTTTGAATGAGGATCTAAGGCTTGTCCTTGGCCAACAAGAGCGCATGAACTGCGGGGAGAATGTCTGGAGTTGTCCTGTAACATACGACAAGCTAGGAGTGAGGTACAGGCTATGGAGGGAGGCTGTTGAACAAGGAATTAAGCAACTACCCTTCACAACCAAATCAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006779 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009706 GO:0009941 GO:0009987 GO:0010277 GO:0015994 GO:0015995 GO:0016020 GO:0016491 GO:0016701 GO:0016703 GO:0018130 GO:0019438 GO:0019866 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0033013 GO:0033014 GO:0034357 GO:0034641 GO:0042170 GO:0042440 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046148 GO:0046483 GO:0051186 GO:0051188 GO:0055035 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00860 ko01100 ko01110 map00860 map01100 map01110

Pfam Domains

Protein Families

PaO Rieske

Protein Analysis

535

Amino Acids

60.18

Weight (kDa)

8.61

Isoelectric Point (pI)

48.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rieske	PF00355	216 - 296	8.8e-25	Rieske [2Fe-2S] domain
VanA_C	PF19112	349 - 519	1.7e-10	Vanillate O-demethylase oxygenase C-terminal domain
PaO	PF08417	403 - 498	4.8e-18	Pheophorbide a oxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44446 AT1G44446 AT1G44446 AT1G44446
fragaria_vesca	FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000 FvH4_2g27000
malus_domestica	MD08G1162200.v1.1 MD15G1347600.v1.1
prunus_persica	Prupe.1G495400_v2.0.a1
pyrus_communis	pycom08g14010 pycom15g31160
rosa_chinensis	RchiOBHm_Chr6g0295881
rosa_laevigata	RLG00000011760
rosa_multiflora	Rmu_sc0003139.1_g000003
rosa_roxburghii	Rroxscaffold_7G00172090
rosa_rugosa	Rorug06G0255000
rosa_samantha	Rh6AG368500 Rh6BG376300 Rh6CG382400 Rh6DG369000
rosa_wichuraiana	Rw6G032130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1165
AasI	GACNNNNNNGTC	1 cut(s)	1159
Acc16I	TGCGCA	1 cut(s)	1083
Acc36I	ACCTGC	2 cut(s)	1165, 1420
Acc65I	GGTACC	1 cut(s)	648
AccB1I	GGYRCC	2 cut(s)	356, 648
AccB7I	CCANNNNNTGG	2 cut(s)	836, 1122
AccII	CGCG	1 cut(s)	267
AciI	CCGC	1 cut(s)	1485
AclWI	GGATC	4 cut(s)	164, 177, 1250, 1452
AcoI	YGGCCR	2 cut(s)	814, 1462
AcsI	RAATTY	3 cut(s)	640, 1145, 1205
AcuI	CTGAAG	2 cut(s)	447, 1403
AfaI	GTAC	9 cut(s)	344, 544, 650, 802, 848, 1227, 1276, 1380, 1538
AfiI	CCNNNNNNNGG	5 cut(s)	307, 836, 1001, 1122, 1163
AflII	CTTAAG	1 cut(s)	674
AgsI	TTSAA	7 cut(s)	211, 598, 617, 637, 1010, 1438, 1562
AjnI	CCWGG	1 cut(s)	952
AloI	GAACNNNNNNTCC	2 cut(s)	1113, 1145
Alw21I	GWGCWC	2 cut(s)	152, 775
Alw26I	GTCTC	1 cut(s)	588
Alw44I	GTGCAC	1 cut(s)	771
AlwI	GGATC	4 cut(s)	164, 177, 1250, 1452
AoxI	GGCC	6 cut(s)	176, 222, 814, 950, 1165, 1462
ApaLI	GTGCAC	1 cut(s)	771
ApeKI	GCWGC	3 cut(s)	20, 23, 215
ApoI	RAATTY	3 cut(s)	640, 1145, 1205
Asp718I	GGTACC	1 cut(s)	648
AspLEI	GCGC	5 cut(s)	267, 269, 1084, 1375, 1476
AspS9I	GGNCC	2 cut(s)	608, 1183
AsuC2I	CCSGG	2 cut(s)	750, 1254
AsuHPI	GGTGA	2 cut(s)	490, 968
AvaII	GGWCC	2 cut(s)	608, 1183
BaeGI	GKGCMC	1 cut(s)	775
BaeI	ACNNNNGTAYC	2 cut(s)	675, 708
BalI	TGGCCA	1 cut(s)	1464
BamHI	GGATCC	1 cut(s)	169
BanI	GGYRCC	2 cut(s)	356, 648
BanII	GRGCYC	1 cut(s)	152
Bbv12I	GWGCWC	2 cut(s)	152, 775
BbvI	GCAGC	3 cut(s)	7, 35, 227
BceAI	ACGGC	1 cut(s)	801
BciT130I	CCWGG	1 cut(s)	954
BcnI	CCSGG	2 cut(s)	750, 1254
BcoDI	GTCTC	1 cut(s)	588
BfaI	CTAG	5 cut(s)	237, 395, 1262, 1329, 1526
BfmI	CTRYAG	2 cut(s)	21, 999
BfrI	CTTAAG	1 cut(s)	674
BfuAI	ACCTGC	2 cut(s)	1165, 1420
BglII	AGATCT	1 cut(s)	1075
BisI	GCNGC	3 cut(s)	21, 24, 216
BlpI	GCTNAGC	3 cut(s)	65, 519, 1020
BlsI	GCNGC	3 cut(s)	22, 25, 217
BmcAI	AGTACT	2 cut(s)	544, 848
Bme1390I	CCNGG	3 cut(s)	750, 954, 1254
Bme18I	GGWCC	2 cut(s)	608, 1183
BmgT120I	GGNCC	2 cut(s)	608, 1183
BmiI	GGNNCC	7 cut(s)	171, 358, 650, 693, 714, 1184, 1185
BmrFI	CCNGG	3 cut(s)	750, 954, 1254
BmrI	ACTGGG	2 cut(s)	534, 1034
BmsI	GCATC	4 cut(s)	505, 536, 553, 864
BmuI	ACTGGG	2 cut(s)	534, 1034
BplI	GAGNNNNNCTC	2 cut(s)	568, 600
BpmI	CTGGAG	1 cut(s)	1519
Bpu10I	CCTNAGC	1 cut(s)	219
Bpu1102I	GCTNAGC	3 cut(s)	65, 519, 1020
BpuMI	CCSGG	2 cut(s)	750, 1254
BsaI	GGTCTC	1 cut(s)	588
BsaJI	CCNNGG	8 cut(s)	173, 225, 687, 716, 749, 796, 1116, 1459
Bsc4I	CCNNNNNNNGG	5 cut(s)	307, 836, 1001, 1122, 1163
Bse1I	ACTGG	4 cut(s)	540, 611, 1040, 1368
Bse3DI	GCAATG	2 cut(s)	901, 911
BseBI	CCWGG	1 cut(s)	954
BseDI	CCNNGG	8 cut(s)	173, 225, 687, 716, 749, 796, 1116, 1459
BseGI	GGATG	8 cut(s)	527, 568, 625, 685, 845, 878, 942, 1127
BseLI	CCNNNNNNNGG	5 cut(s)	307, 836, 1001, 1122, 1163
BseMI	GCAATG	2 cut(s)	901, 911
BseMII	CTCAG	3 cut(s)	233, 510, 1011
BseNI	ACTGG	4 cut(s)	540, 611, 1040, 1368
BsePI	GCGCGC	1 cut(s)	265
BseRI	GAGGAG	3 cut(s)	131, 287, 592
BseSI	GKGCMC	1 cut(s)	775
BseXI	GCAGC	3 cut(s)	7, 35, 227
Bsh1236I	CGCG	1 cut(s)	267
BshFI	GGCC	6 cut(s)	178, 224, 816, 952, 1167, 1464
BshNI	GGYRCC	2 cut(s)	356, 648
BsiHKAI	GWGCWC	2 cut(s)	152, 775
BsiSI	CCGG	3 cut(s)	749, 1164, 1253
BslFI	GGGAC	1 cut(s)	1196
BslI	CCNNNNNNNGG	5 cut(s)	307, 836, 1001, 1122, 1163
BsmAI	GTCTC	1 cut(s)	588
BsmFI	GGGAC	1 cut(s)	1196
BsnI	GGCC	6 cut(s)	178, 224, 816, 952, 1167, 1464
Bso31I	GGTCTC	1 cut(s)	588
Bsp1286I	GDGCHC	2 cut(s)	152, 775
Bsp143I	GATC	5 cut(s)	53, 169, 1075, 1242, 1444
Bsp1720I	GCTNAGC	3 cut(s)	65, 519, 1020
Bsp19I	CCATGG	2 cut(s)	687, 716
BspACI	CCGC	1 cut(s)	1485
BspANI	GGCC	6 cut(s)	178, 224, 816, 952, 1167, 1464
BspCNI	CTCAG	3 cut(s)	232, 511, 1012
BspFNI	CGCG	1 cut(s)	267
BspLI	GGNNCC	7 cut(s)	171, 358, 650, 693, 714, 1184, 1185
BspMAI	CTGCAG	2 cut(s)	25, 1003
BspMI	ACCTGC	2 cut(s)	1165, 1420
BspPI	GGATC	4 cut(s)	164, 177, 1250, 1452
BspT107I	GGYRCC	2 cut(s)	356, 648
BspTI	CTTAAG	1 cut(s)	674
BspTNI	GGTCTC	1 cut(s)	588
BsrDI	GCAATG	2 cut(s)	901, 911
BsrI	ACTGG	4 cut(s)	540, 611, 1040, 1368
BssECI	CCNNGG	8 cut(s)	173, 225, 687, 716, 749, 796, 1116, 1459
BssHII	GCGCGC	1 cut(s)	265
BssMI	GATC	5 cut(s)	53, 169, 1075, 1242, 1444
BssT1I	CCWWGG	7 cut(s)	173, 225, 687, 716, 796, 1116, 1459
Bst2UI	CCWGG	1 cut(s)	954
Bst4CI	ACNGT	2 cut(s)	257, 805
BstAFI	CTTAAG	1 cut(s)	674
BstAPI	GCANNNNNTGC	2 cut(s)	437, 1482
BstC8I	GCNNGC	7 cut(s)	141, 267, 375, 525, 784, 1086, 1169
BstDEI	CTNAG	5 cut(s)	65, 219, 519, 1020, 1448
BstDSI	CCRYGG	2 cut(s)	687, 716
BstENI	CCTNNNNNAGG	1 cut(s)	999
BstF5I	GGATG	8 cut(s)	527, 568, 625, 685, 845, 878, 942, 1127
BstFNI	CGCG	1 cut(s)	267
BstHHI	GCGC	5 cut(s)	267, 269, 1084, 1375, 1476
BstKTI	GATC	5 cut(s)	56, 172, 1078, 1245, 1447
BstMAI	GTCTC	1 cut(s)	588
BstMBI	GATC	5 cut(s)	53, 169, 1075, 1242, 1444
BstMWI	GCNNNNNNNGC	7 cut(s)	20, 221, 437, 524, 779, 1134, 1482
BstNI	CCWGG	1 cut(s)	954
BstNSI	RCATGY	3 cut(s)	143, 828, 1088
BstSCI	CCNGG	3 cut(s)	748, 952, 1252
BstSFI	CTRYAG	2 cut(s)	21, 999
BstSLI	GKGCMC	1 cut(s)	775
BstUI	CGCG	1 cut(s)	267
BstV1I	GCAGC	3 cut(s)	7, 35, 227
BstX2I	RGATCY	4 cut(s)	169, 1075, 1242, 1444
BstYI	RGATCY	4 cut(s)	169, 1075, 1242, 1444
BsuRI	GGCC	6 cut(s)	178, 224, 816, 952, 1167, 1464
BtgI	CCRYGG	2 cut(s)	687, 716
BtsCI	GGATG	8 cut(s)	527, 568, 625, 685, 845, 878, 942, 1127
BtsI	GCAGTG	2 cut(s)	441, 1289
BtsIMutI	CAGTG	4 cut(s)	441, 1047, 1289, 1361
BveI	ACCTGC	2 cut(s)	1165, 1420
Cac8I	GCNNGC	7 cut(s)	141, 267, 375, 525, 784, 1086, 1169
CfoI	GCGC	5 cut(s)	267, 269, 1084, 1375, 1476
Cfr13I	GGNCC	2 cut(s)	608, 1183
CseI	GACGC	1 cut(s)	1149
Csp6I	GTAC	9 cut(s)	343, 543, 649, 801, 847, 1226, 1275, 1379, 1537
CviQI	GTAC	9 cut(s)	343, 543, 649, 801, 847, 1226, 1275, 1379, 1537
DdeI	CTNAG	5 cut(s)	65, 219, 519, 1020, 1448
DpnI	GATC	5 cut(s)	55, 171, 1077, 1244, 1446
DpnII	GATC	5 cut(s)	53, 169, 1075, 1242, 1444
DrdI	GACNNNNNNGTC	1 cut(s)	1159
DseDI	GACNNNNNNGTC	1 cut(s)	1159
EaeI	YGGCCR	2 cut(s)	814, 1462
Ecl136II	GAGCTC	1 cut(s)	150
Eco130I	CCWWGG	7 cut(s)	173, 225, 687, 716, 796, 1116, 1459
Eco147I	AGGCCT	2 cut(s)	178, 224
Eco24I	GRGCYC	1 cut(s)	152
Eco31I	GGTCTC	1 cut(s)	588
Eco47I	GGWCC	2 cut(s)	608, 1183
Eco53kI	GAGCTC	1 cut(s)	150
Eco57I	CTGAAG	2 cut(s)	447, 1403
EcoICRI	GAGCTC	1 cut(s)	150
EcoNI	CCTNNNNNAGG	1 cut(s)	999
EcoO109I	RGGNCCY	1 cut(s)	1183
EcoRII	CCWGG	1 cut(s)	952
EcoT14I	CCWWGG	7 cut(s)	173, 225, 687, 716, 796, 1116, 1459
EcoT38I	GRGCYC	1 cut(s)	152
ErhI	CCWWGG	7 cut(s)	173, 225, 687, 716, 796, 1116, 1459
FaqI	GGGAC	1 cut(s)	1196
FauI	CCCGC	1 cut(s)	1478
Fnu4HI	GCNGC	3 cut(s)	21, 24, 216
FokI	GGATG	8 cut(s)	514, 575, 612, 692, 852, 865, 949, 1134
FriOI	GRGCYC	1 cut(s)	152
Fsp4HI	GCNGC	3 cut(s)	21, 24, 216
FspBI	CTAG	5 cut(s)	237, 395, 1262, 1329, 1526
FspI	TGCGCA	1 cut(s)	1083
GlaI	GCGC	5 cut(s)	266, 268, 1083, 1374, 1475
GluI	GCNGC	3 cut(s)	21, 24, 216
GsuI	CTGGAG	1 cut(s)	1519
HaeIII	GGCC	6 cut(s)	178, 224, 816, 952, 1167, 1464
HapII	CCGG	3 cut(s)	749, 1164, 1253
HgaI	GACGC	1 cut(s)	1149
HhaI	GCGC	5 cut(s)	267, 269, 1084, 1375, 1476
Hin6I	GCGC	5 cut(s)	265, 267, 1082, 1373, 1474
HinP1I	GCGC	5 cut(s)	265, 267, 1082, 1373, 1474
HindIII	AAGCTT	1 cut(s)	62
HinfI	GANTC	1 cut(s)	119
HpaII	CCGG	3 cut(s)	749, 1164, 1253
HphI	GGTGA	2 cut(s)	490, 968
Hpy166II	GTNNAC	2 cut(s)	773, 1107
Hpy188I	TCNGA	4 cut(s)	427, 588, 762, 1134
Hpy188III	TCNNGA	6 cut(s)	208, 364, 791, 1061, 1329, 1498
Hpy8I	GTNNAC	2 cut(s)	773, 1107
HpyCH4III	ACNGT	2 cut(s)	257, 805
HpyCH4IV	ACGT	2 cut(s)	1103, 1404
HpyF10VI	GCNNNNNNNGC	7 cut(s)	20, 221, 437, 524, 779, 1134, 1482
HpyF3I	CTNAG	5 cut(s)	65, 219, 519, 1020, 1448
HpySE526I	ACGT	2 cut(s)	1103, 1404
HspAI	GCGC	5 cut(s)	265, 267, 1082, 1373, 1474
KflI	GGGWCCC	1 cut(s)	1183
KpnI	GGTACC	1 cut(s)	652
Kzo9I	GATC	5 cut(s)	53, 169, 1075, 1242, 1444
LmnI	GCTCC	5 cut(s)	147, 300, 370, 1093, 1125
Lsp1109I	GCAGC	3 cut(s)	7, 35, 227
LweI	GCATC	4 cut(s)	505, 536, 553, 864
MaeI	CTAG	5 cut(s)	237, 395, 1262, 1329, 1526
MaeII	ACGT	2 cut(s)	1103, 1404
MaeIII	GTNAC	4 cut(s)	492, 1344, 1359, 1510
MalI	GATC	5 cut(s)	55, 171, 1077, 1244, 1446
MboI	GATC	5 cut(s)	53, 169, 1075, 1242, 1444
MboII	GAAGA	7 cut(s)	401, 482, 649, 883, 913, 1289, 1317
MfeI	CAATTG	1 cut(s)	696
MflI	RGATCY	4 cut(s)	169, 1075, 1242, 1444
MhlI	GDGCHC	2 cut(s)	152, 775
MlsI	TGGCCA	1 cut(s)	1464
MluCI	AATT	9 cut(s)	191, 455, 473, 640, 696, 887, 1145, 1205, 1569
MluNI	TGGCCA	1 cut(s)	1464
MlyI	GAGTC	1 cut(s)	128
Mox20I	TGGCCA	1 cut(s)	1464
MscI	TGGCCA	1 cut(s)	1464
MseI	TTAA	3 cut(s)	675, 906, 1572
MslI	CAYNNNNRTG	1 cut(s)	916
Msp20I	TGGCCA	1 cut(s)	1464
MspA1I	CMGCKG	1 cut(s)	20
MspCI	CTTAAG	1 cut(s)	674
MspI	CCGG	3 cut(s)	749, 1164, 1253
MspR9I	CCNGG	3 cut(s)	750, 954, 1254
MunI	CAATTG	1 cut(s)	696
MvaI	CCWGG	1 cut(s)	954
MvnI	CGCG	1 cut(s)	267
MwoI	GCNNNNNNNGC	7 cut(s)	20, 221, 437, 524, 779, 1134, 1482
NciI	CCSGG	2 cut(s)	750, 1254
NcoI	CCATGG	2 cut(s)	687, 716
NdeII	GATC	5 cut(s)	53, 169, 1075, 1242, 1444
NlaIV	GGNNCC	7 cut(s)	171, 358, 650, 693, 714, 1184, 1185
NmuCI	GTSAC	1 cut(s)	1359
NsbI	TGCGCA	1 cut(s)	1083
NspI	RCATGY	3 cut(s)	143, 828, 1088
PaeI	GCATGC	2 cut(s)	143, 1088
PaqCI	CACCTGC	1 cut(s)	1165
PauI	GCGCGC	1 cut(s)	265
PceI	AGGCCT	2 cut(s)	178, 224
PflMI	CCANNNNNTGG	2 cut(s)	836, 1122
PkrI	GCNGC	3 cut(s)	22, 25, 217
PleI	GAGTC	1 cut(s)	127
PpsI	GAGTC	1 cut(s)	127
PpuMI	RGGWCCY	1 cut(s)	1183
Psp124BI	GAGCTC	1 cut(s)	152
Psp5II	RGGWCCY	1 cut(s)	1183
Psp6I	CCWGG	1 cut(s)	952
PspGI	CCWGG	1 cut(s)	952
PspN4I	GGNNCC	7 cut(s)	171, 358, 650, 693, 714, 1184, 1185
PspPI	GGNCC	2 cut(s)	608, 1183
PspPPI	RGGWCCY	1 cut(s)	1183
PsrI	GAACNNNNNNTAC	2 cut(s)	1038, 1070
PstI	CTGCAG	2 cut(s)	25, 1003
PsuI	RGATCY	4 cut(s)	169, 1075, 1242, 1444
PteI	GCGCGC	1 cut(s)	265
PvuII	CAGCTG	1 cut(s)	20
RsaI	GTAC	9 cut(s)	344, 544, 650, 802, 848, 1227, 1276, 1380, 1538
RsaNI	GTAC	9 cut(s)	343, 543, 649, 801, 847, 1226, 1275, 1379, 1537
RseI	CAYNNNNRTG	1 cut(s)	916
SacI	GAGCTC	1 cut(s)	152
SaqAI	TTAA	3 cut(s)	675, 906, 1572
SatI	GCNGC	3 cut(s)	21, 24, 216
Sau3AI	GATC	5 cut(s)	53, 169, 1075, 1242, 1444
Sau96I	GGNCC	2 cut(s)	608, 1183
SbfI	CCTGCAGG	1 cut(s)	1003
ScaI	AGTACT	2 cut(s)	544, 848
SchI	GAGTC	1 cut(s)	128
ScrFI	CCNGG	3 cut(s)	750, 954, 1254
SdaI	CCTGCAGG	1 cut(s)	1003
SduI	GDGCHC	2 cut(s)	152, 775
SfaNI	GCATC	4 cut(s)	505, 536, 553, 864
SfcI	CTRYAG	2 cut(s)	21, 999
SinI	GGWCC	2 cut(s)	608, 1183
SmiMI	CAYNNNNRTG	1 cut(s)	916
SmlI	CTYRAG	1 cut(s)	674
SmoI	CTYRAG	1 cut(s)	674
SphI	GCATGC	2 cut(s)	143, 1088
Sse8387I	CCTGCAGG	1 cut(s)	1003
Sse9I	AATT	9 cut(s)	191, 455, 473, 640, 696, 887, 1145, 1205, 1569
SseBI	AGGCCT	2 cut(s)	178, 224
SsiI	CCGC	1 cut(s)	1485
SspMI	CTAG	5 cut(s)	237, 395, 1262, 1329, 1526
SstI	GAGCTC	1 cut(s)	152
StuI	AGGCCT	2 cut(s)	178, 224
StyD4I	CCNGG	3 cut(s)	748, 952, 1252
StyI	CCWWGG	7 cut(s)	173, 225, 687, 716, 796, 1116, 1459
TaaI	ACNGT	2 cut(s)	257, 805
TaiI	ACGT	2 cut(s)	1106, 1407
TaqI	TCGA	2 cut(s)	271, 1210
TasI	AATT	9 cut(s)	191, 455, 473, 640, 696, 887, 1145, 1205, 1569
TatI	WGTACW	4 cut(s)	342, 542, 846, 1274
Tru1I	TTAA	3 cut(s)	675, 906, 1572
Tru9I	TTAA	3 cut(s)	675, 906, 1572
TscAI	CASTG	4 cut(s)	448, 1047, 1289, 1368
TseFI	GTSAC	1 cut(s)	1359
TseI	GCWGC	3 cut(s)	20, 23, 215
Tsp45I	GTSAC	1 cut(s)	1359
TspDTI	ATGAA	7 cut(s)	318, 407, 454, 1289, 1298, 1387, 1493
TspRI	CASTG	4 cut(s)	448, 1047, 1289, 1368
Van91I	CCANNNNNTGG	2 cut(s)	836, 1122
Vha464I	CTTAAG	1 cut(s)	674
VneI	GTGCAC	1 cut(s)	771
VpaK11BI	GGWCC	2 cut(s)	608, 1183
XagI	CCTNNNNNAGG	1 cut(s)	999
XapI	RAATTY	3 cut(s)	640, 1145, 1205
XbaI	TCTAGA	1 cut(s)	1328
XceI	RCATGY	3 cut(s)	143, 828, 1088
XcmI	CCANNNNNNNNNTGG	1 cut(s)	837
XspI	CTAG	5 cut(s)	237, 395, 1262, 1329, 1526
ZrmI	AGTACT	2 cut(s)	544, 848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.