Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0012087

Physical Location & Seq

Genomic Coordinates Reverse (-)

21843501 .. 21847251

Gene Structure 3751 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g27570.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1059 bp

ATGGCGCCACTGGTCCCGAGCTCCCAGCCATGGGTCGAGAAATATCGACCGAAGCAAGTGAAAGATGTGGCTCAGCAGGATGAGGTGGTCCGCGTCCTCACCAACACCCTTGAGACCTCAAATTGTCCGCATATGCTGTTCTATGGCCCACCTGGCACCGGGAAAACCACCACCGCTCTCGCCATTGCCCGCCAGCTTTTCGGACCTGAACTCTACAAGTCTAGAGTTTTGGAGCTCAATGCAAGTGATGATCGTGGGATCAATATCGTGCGGACAAAGATTAAAGACTTTGCTGCTGTGGCTGTGAAATCTTGTAAAGGGCAGGGGGGTTACCCTTGTCCGCCATTTAAGATTATTATTCTTGATGAGGCAGATTCAATGACAGAAGATGCTCAGAATGCCCTAAGACGTACAATGGAAACTTACTCCAGAGGCTCAAGATTCTTCTTTCTATGTAATTATATCAGCAGGTTTCGCTGCTTGGTGGTATATGTGGCTGTATTTTGTAGGATCATAGAGCCACTTGCATCGAGGTGTGCCAAGTTCAGGTTTAAGCCACTTTCAGAAGATATAATGATCACCCGTGTGCTGCACATTTGCCAAGAAGAAGGACTCGACCTGGAGCCAGAGGCTCTGTCAACATTAAGTTCTATCTCACAAGGTGATCTTCGTCGAGCTATCACATATTTGCAGTCAGCTGCTCGCTTGTTTGGATCTTCTATTACTTCAAAGGACCTGATTAGTGTCTCCGGGGTCATTCCGCAGGAGGTTGTCGATTCATTTTTTGCTGCTTGCAGAAGTGGCAACTTTGATTTGGCAAACAAGGAAGTCAACAATGTAATTGCAGAAGGATATCCGGTTTCTCAGATGTTTTCACAGTTGTTTGACATTGTGGTCGAAGCAGATGACATATCAGATGAACAGATTGCTAGAATATGCAAGAAATTGGGCGAAGCAGATAAGCGTCTTGTTGATGGCAGTGATGAGTACTTGCAGCTGCTGGATGTTGCAAGCAGTACAATGCGAGCTATCTGTAACATGCAAGAAGATTTCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005657 GO:0005663 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010556 GO:0010557 GO:0010604 GO:0019219 GO:0019222 GO:0019899 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031390 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051338 GO:0051347 GO:0051716 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:1900262 GO:1900264 GO:1901360 GO:1901576 GO:2000112 GO:2000278 GO:2000573

KEGG Pathways

Metabolic & Signaling

ko03030 ko03420 ko03430 map03030 map03420 map03430

Pfam Domains

Protein Families

AAA Rep_fac_C

Protein Analysis

353

Amino Acids

39.24

Weight (kDa)

5.37

Isoelectric Point (pI)

43.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_pol3_delta2	PF13177	26 - 174	3.5e-11	DNA polymerase III, delta subunit
AAA	PF00004	45 - 173	4.1e-17	ATPase family associated with various cellular activities (AAA)
AAA_lid_RFC1	PF25361	181 - 220	3.4e-07	RFC1-like, AAA+ ATPase lid domain
RCF1-5-like_lid	PF21960	185 - 222	2.7e-08	RCF1/5-like, AAA+ ATPase lid domain
Rep_fac_C	PF08542	241 - 325	1.5e-20	Replication factor C C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012087)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21690 AT1G21690 AT1G21690 AT1G21690
fragaria_vesca	FvH4_2g27570 FvH4_2g27570
malus_domestica	MD15G1344500.v1.1
prunus_persica	Prupe.1G492200_v2.0.a1 Prupe.1G492200_v2.0.a1
pyrus_communis	pycom15g30770
rosa_chinensis	RchiOBHm_Chr6g0296411
rosa_laevigata	RLG00000011690
rosa_multiflora	Rmu_sc0008096.1_g000015
rosa_roxburghii	Rroxscaffold_7G00171570 Rroxscaffold_7G00178550
rosa_rugosa	Rorug06G0262100 Rorug06G0262200
rosa_samantha	Rh6BG381800
rosa_wichuraiana	Rw6G032570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	893
Acc36I	ACCTGC	1 cut(s)	459
AccB1I	GGYRCC	2 cut(s)	4, 155
AccBSI	CCGCTC	1 cut(s)	176
AccII	CGCG	1 cut(s)	93
AciI	CCGC	7 cut(s)	91, 128, 174, 190, 271, 341, 761
AclWI	GGATC	3 cut(s)	266, 518, 721
AcyI	GRCGYC	1 cut(s)	5
AdeI	CACNNNGTG	1 cut(s)	662
AfaI	GTAC	3 cut(s)	412, 989, 1018
AfiI	CCNNNNNNNGG	4 cut(s)	30, 31, 158, 546
AgsI	TTSAA	2 cut(s)	378, 729
AjnI	CCWGG	2 cut(s)	151, 618
AleI	CACNNNNGTG	1 cut(s)	584
AluBI	AGCT	7 cut(s)	21, 196, 235, 677, 698, 997, 1028
AluI	AGCT	7 cut(s)	21, 196, 235, 677, 698, 997, 1028
Alw21I	GWGCWC	2 cut(s)	23, 237
Alw26I	GTCTC	2 cut(s)	107, 751
AlwI	GGATC	3 cut(s)	266, 518, 721
AlwNI	CAGNNNCTG	1 cut(s)	1000
Ama87I	CYCGRG	1 cut(s)	16
AoxI	GGCC	1 cut(s)	145
ApeKI	GCWGC	7 cut(s)	293, 477, 589, 698, 788, 994, 997
AspLEI	GCGC	1 cut(s)	7
AspS9I	GGNCC	5 cut(s)	13, 88, 146, 203, 733
AsuC2I	CCSGG	2 cut(s)	160, 751
AsuHPI	GGTGA	3 cut(s)	91, 571, 674
AvaI	CYCGRG	1 cut(s)	16
AvaII	GGWCC	4 cut(s)	13, 88, 203, 733
BanI	GGYRCC	2 cut(s)	4, 155
BanII	GRGCYC	2 cut(s)	23, 237
Bbv12I	GWGCWC	2 cut(s)	23, 237
BbvI	GCAGC	7 cut(s)	280, 464, 576, 685, 775, 984, 1006
BccI	CCATC	1 cut(s)	968
BciT130I	CCWGG	2 cut(s)	153, 620
BclI	TGATCA	1 cut(s)	576
BcnI	CCSGG	2 cut(s)	160, 751
BcoDI	GTCTC	2 cut(s)	107, 751
BfaI	CTAG	2 cut(s)	222, 930
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	1 cut(s)	459
BglI	GCCNNNNNGGC	1 cut(s)	153
BisI	GCNGC	7 cut(s)	294, 478, 590, 699, 789, 995, 998
BlpI	GCTNAGC	1 cut(s)	72
BlsI	GCNGC	7 cut(s)	295, 479, 591, 700, 790, 996, 999
BmcAI	AGTACT	1 cut(s)	989
Bme1390I	CCNGG	4 cut(s)	153, 160, 620, 751
Bme18I	GGWCC	4 cut(s)	13, 88, 203, 733
BmeT110I	CYCGRG	1 cut(s)	16
BmgT120I	GGNCC	5 cut(s)	13, 88, 146, 203, 733
BmiI	GGNNCC	4 cut(s)	6, 15, 157, 624
BmrFI	CCNGG	4 cut(s)	153, 160, 620, 751
BmsI	GCATC	2 cut(s)	379, 536
BpmI	CTGGAG	2 cut(s)	412, 641
Bpu1102I	GCTNAGC	1 cut(s)	72
BpuEI	CTTGAG	2 cut(s)	131, 421
BpuMI	CCSGG	2 cut(s)	160, 751
BsaBI	GATNNNNATC	1 cut(s)	263
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	107
BsaJI	CCNNGG	2 cut(s)	29, 750
BsaWI	WCCGGW	1 cut(s)	856
Bsc4I	CCNNNNNNNGG	4 cut(s)	30, 31, 158, 546
Bse1I	ACTGG	1 cut(s)	15
Bse3DI	GCAATG	1 cut(s)	183
Bse8I	GATNNNNATC	1 cut(s)	263
BseBI	CCWGG	2 cut(s)	153, 620
BseDI	CCNNGG	2 cut(s)	29, 750
BseGI	GGATG	2 cut(s)	85, 1009
BseJI	GATNNNNATC	1 cut(s)	263
BseLI	CCNNNNNNNGG	4 cut(s)	30, 31, 158, 546
BseMI	GCAATG	1 cut(s)	183
BseMII	CTCAG	3 cut(s)	86, 407, 878
BseNI	ACTGG	1 cut(s)	15
BseXI	GCAGC	7 cut(s)	280, 464, 576, 685, 775, 984, 1006
BseYI	CCCAGC	1 cut(s)	24
BsgI	GTGCAG	1 cut(s)	575
Bsh1236I	CGCG	1 cut(s)	93
Bsh1285I	CGRYCG	1 cut(s)	50
BshFI	GGCC	1 cut(s)	147
BshNI	GGYRCC	2 cut(s)	4, 155
BsiEI	CGRYCG	1 cut(s)	50
BsiHKAI	GWGCWC	2 cut(s)	23, 237
BsiHKCI	CYCGRG	1 cut(s)	16
BsiSI	CCGG	3 cut(s)	159, 750, 857
BslI	CCNNNNNNNGG	4 cut(s)	30, 31, 158, 546
BsmAI	GTCTC	2 cut(s)	107, 751
BsmI	GAATGC	1 cut(s)	403
BsnI	GGCC	1 cut(s)	147
Bso31I	GGTCTC	1 cut(s)	107
BsoBI	CYCGRG	1 cut(s)	16
Bsp1286I	GDGCHC	2 cut(s)	23, 237
Bsp143I	GATC	6 cut(s)	250, 258, 510, 576, 664, 713
Bsp1720I	GCTNAGC	1 cut(s)	72
Bsp19I	CCATGG	1 cut(s)	29
BspACI	CCGC	7 cut(s)	91, 128, 174, 190, 271, 341, 761
BspANI	GGCC	1 cut(s)	147
BspCNI	CTCAG	3 cut(s)	85, 406, 877
BspFNI	CGCG	1 cut(s)	93
BspLI	GGNNCC	4 cut(s)	6, 15, 157, 624
BspMI	ACCTGC	1 cut(s)	459
BspPI	GGATC	3 cut(s)	266, 518, 721
BspT107I	GGYRCC	2 cut(s)	4, 155
BspTNI	GGTCTC	1 cut(s)	107
BsrBI	CCGCTC	1 cut(s)	176
BsrDI	GCAATG	1 cut(s)	183
BsrI	ACTGG	1 cut(s)	15
BssECI	CCNNGG	2 cut(s)	29, 750
BssMI	GATC	6 cut(s)	250, 258, 510, 576, 664, 713
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	1 cut(s)	29
Bst2UI	CCWGG	2 cut(s)	153, 620
Bst4CI	ACNGT	1 cut(s)	879
BstACI	GRCGYC	1 cut(s)	5
BstC8I	GCNNGC	6 cut(s)	190, 194, 703, 793, 1012, 1026
BstDEI	CTNAG	4 cut(s)	72, 393, 404, 864
BstDSI	CCRYGG	1 cut(s)	29
BstEII	GGTNACC	1 cut(s)	329
BstF5I	GGATG	2 cut(s)	85, 1009
BstFNI	CGCG	1 cut(s)	93
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	1 cut(s)	7
BstKTI	GATC	6 cut(s)	253, 261, 513, 579, 667, 716
BstMAI	GTCTC	2 cut(s)	107, 751
BstMBI	GATC	6 cut(s)	250, 258, 510, 576, 664, 713
BstMCI	CGRYCG	1 cut(s)	50
BstMWI	GCNNNNNNNGC	5 cut(s)	153, 299, 398, 474, 801
BstNI	CCWGG	2 cut(s)	153, 620
BstNSI	RCATGY	1 cut(s)	1042
BstPI	GGTNACC	1 cut(s)	329
BstSCI	CCNGG	4 cut(s)	151, 158, 618, 749
BstUI	CGCG	1 cut(s)	93
BstV1I	GCAGC	7 cut(s)	280, 464, 576, 685, 775, 984, 1006
BstX2I	RGATCY	1 cut(s)	713
BstYI	RGATCY	1 cut(s)	713
BsuRI	GGCC	1 cut(s)	147
BtgI	CCRYGG	1 cut(s)	29
BtsCI	GGATG	2 cut(s)	85, 1009
BtsI	GCAGTG	1 cut(s)	985
BtsIMutI	CAGTG	2 cut(s)	8, 985
BveI	ACCTGC	1 cut(s)	459
Cac8I	GCNNGC	6 cut(s)	190, 194, 703, 793, 1012, 1026
CaiI	CAGNNNCTG	1 cut(s)	1000
CfoI	GCGC	1 cut(s)	7
Cfr13I	GGNCC	5 cut(s)	13, 88, 146, 203, 733
CseI	GACGC	2 cut(s)	82, 953
Csp6I	GTAC	3 cut(s)	411, 988, 1017
CviAII	CATG	2 cut(s)	30, 1039
CviQI	GTAC	3 cut(s)	411, 988, 1017
DdeI	CTNAG	4 cut(s)	72, 393, 404, 864
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	6 cut(s)	252, 260, 512, 578, 666, 715
DpnII	GATC	6 cut(s)	250, 258, 510, 576, 664, 713
DraIII	CACNNNGTG	1 cut(s)	662
DrdI	GACNNNNNNGTC	1 cut(s)	893
DseDI	GACNNNNNNGTC	1 cut(s)	893
EciI	GGCGGA	1 cut(s)	330
Ecl136II	GAGCTC	2 cut(s)	21, 235
Eco130I	CCWWGG	1 cut(s)	29
Eco24I	GRGCYC	2 cut(s)	23, 237
Eco31I	GGTCTC	1 cut(s)	107
Eco32I	GATATC	1 cut(s)	854
Eco47I	GGWCC	4 cut(s)	13, 88, 203, 733
Eco53kI	GAGCTC	2 cut(s)	21, 235
Eco88I	CYCGRG	1 cut(s)	16
Eco91I	GGTNACC	1 cut(s)	329
EcoICRI	GAGCTC	2 cut(s)	21, 235
EcoO109I	RGGNCCY	1 cut(s)	733
EcoO65I	GGTNACC	1 cut(s)	329
EcoRII	CCWGG	2 cut(s)	151, 618
EcoRV	GATATC	1 cut(s)	854
EcoT14I	CCWWGG	1 cut(s)	29
EcoT38I	GRGCYC	2 cut(s)	23, 237
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	1 cut(s)	29
FaeI	CATG	2 cut(s)	33, 1042
FalI	AAGNNNNNCTT	2 cut(s)	651, 683
FatI	CATG	2 cut(s)	29, 1038
FauI	CCCGC	1 cut(s)	197
FauNDI	CATATG	1 cut(s)	132
FbaI	TGATCA	1 cut(s)	576
Fnu4HI	GCNGC	7 cut(s)	294, 478, 590, 699, 789, 995, 998
FokI	GGATG	2 cut(s)	92, 1016
FriOI	GRGCYC	2 cut(s)	23, 237
Fsp4HI	GCNGC	7 cut(s)	294, 478, 590, 699, 789, 995, 998
FspBI	CTAG	2 cut(s)	222, 930
GlaI	GCGC	1 cut(s)	6
GluI	GCNGC	7 cut(s)	294, 478, 590, 699, 789, 995, 998
GsaI	CCCAGC	1 cut(s)	28
GsuI	CTGGAG	2 cut(s)	412, 641
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	1 cut(s)	147
HapII	CCGG	3 cut(s)	159, 750, 857
HgaI	GACGC	2 cut(s)	82, 953
HhaI	GCGC	1 cut(s)	7
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	2 cut(s)	33, 1042
Hin6I	GCGC	1 cut(s)	5
HinP1I	GCGC	1 cut(s)	5
HincII	GTYRAC	2 cut(s)	639, 832
HindII	GTYRAC	2 cut(s)	639, 832
HinfI	GANTC	4 cut(s)	374, 441, 612, 776
HpaII	CCGG	3 cut(s)	159, 750, 857
HphI	GGTGA	3 cut(s)	91, 571, 674
Hpy166II	GTNNAC	2 cut(s)	639, 832
Hpy188I	TCNGA	5 cut(s)	203, 396, 565, 867, 916
Hpy188III	TCNNGA	6 cut(s)	16, 37, 222, 362, 429, 438
Hpy8I	GTNNAC	2 cut(s)	639, 832
Hpy99I	CGWCG	1 cut(s)	675
HpyAV	CCTTC	2 cut(s)	602, 842
HpyCH4III	ACNGT	1 cut(s)	879
HpyCH4IV	ACGT	1 cut(s)	409
HpyF10VI	GCNNNNNNNGC	5 cut(s)	153, 299, 398, 474, 801
HpyF3I	CTNAG	4 cut(s)	72, 393, 404, 864
HpySE526I	ACGT	1 cut(s)	409
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	2 cut(s)	33, 1042
HspAI	GCGC	1 cut(s)	5
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	1 cut(s)	576
Kzo9I	GATC	6 cut(s)	250, 258, 510, 576, 664, 713
LmnI	GCTCC	3 cut(s)	26, 232, 622
Lsp1109I	GCAGC	7 cut(s)	280, 464, 576, 685, 775, 984, 1006
LweI	GCATC	2 cut(s)	379, 536
MaeI	CTAG	2 cut(s)	222, 930
MaeII	ACGT	1 cut(s)	409
MaeIII	GTNAC	2 cut(s)	329, 1034
MalI	GATC	6 cut(s)	252, 260, 512, 578, 666, 715
MbiI	CCGCTC	1 cut(s)	176
MboI	GATC	6 cut(s)	250, 258, 510, 576, 664, 713
MboII	GAAGA	7 cut(s)	398, 436, 578, 617, 659, 708, 1058
MflI	RGATCY	1 cut(s)	713
MhlI	GDGCHC	2 cut(s)	23, 237
MluCI	AATT	4 cut(s)	121, 457, 840, 944
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	606
MnlI	CCTC	8 cut(s)	76, 107, 127, 361, 425, 525, 622, 760
MseI	TTAA	5 cut(s)	282, 348, 552, 644, 1057
MslI	CAYNNNNRTG	2 cut(s)	532, 584
MspA1I	CMGCKG	2 cut(s)	698, 997
MspI	CCGG	3 cut(s)	159, 750, 857
MspR9I	CCNGG	4 cut(s)	153, 160, 620, 751
Mva1269I	GAATGC	1 cut(s)	403
MvaI	CCWGG	2 cut(s)	153, 620
MvnI	CGCG	1 cut(s)	93
MwoI	GCNNNNNNNGC	5 cut(s)	153, 299, 398, 474, 801
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	2 cut(s)	160, 751
NcoI	CCATGG	1 cut(s)	29
NdeI	CATATG	1 cut(s)	132
NdeII	GATC	6 cut(s)	250, 258, 510, 576, 664, 713
NlaIII	CATG	2 cut(s)	33, 1042
NlaIV	GGNNCC	4 cut(s)	6, 15, 157, 624
NspI	RCATGY	1 cut(s)	1042
OliI	CACNNNNGTG	1 cut(s)	584
PctI	GAATGC	1 cut(s)	403
PfeI	GAWTC	3 cut(s)	374, 441, 776
PkrI	GCNGC	7 cut(s)	295, 479, 591, 700, 790, 996, 999
PleI	GAGTC	1 cut(s)	606
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	1 cut(s)	606
PpuMI	RGGWCCY	1 cut(s)	733
Psp124BI	GAGCTC	2 cut(s)	23, 237
Psp5II	RGGWCCY	1 cut(s)	733
Psp6I	CCWGG	2 cut(s)	151, 618
PspEI	GGTNACC	1 cut(s)	329
PspFI	CCCAGC	1 cut(s)	24
PspGI	CCWGG	2 cut(s)	151, 618
PspN4I	GGNNCC	4 cut(s)	6, 15, 157, 624
PspPI	GGNCC	5 cut(s)	13, 88, 146, 203, 733
PspPPI	RGGWCCY	1 cut(s)	733
PstNI	CAGNNNCTG	1 cut(s)	1000
PsuI	RGATCY	1 cut(s)	713
PvuII	CAGCTG	2 cut(s)	698, 997
RsaI	GTAC	3 cut(s)	412, 989, 1018
RsaNI	GTAC	3 cut(s)	411, 988, 1017
RseI	CAYNNNNRTG	2 cut(s)	532, 584
SacI	GAGCTC	2 cut(s)	23, 237
SaqAI	TTAA	5 cut(s)	282, 348, 552, 644, 1057
SatI	GCNGC	7 cut(s)	294, 478, 590, 699, 789, 995, 998
Sau3AI	GATC	6 cut(s)	250, 258, 510, 576, 664, 713
Sau96I	GGNCC	5 cut(s)	13, 88, 146, 203, 733
ScaI	AGTACT	1 cut(s)	989
SchI	GAGTC	1 cut(s)	606
ScrFI	CCNGG	4 cut(s)	153, 160, 620, 751
SduI	GDGCHC	2 cut(s)	23, 237
SfaNI	GCATC	2 cut(s)	379, 536
SfoI	GGCGCC	1 cut(s)	6
SinI	GGWCC	4 cut(s)	13, 88, 203, 733
SmiMI	CAYNNNNRTG	2 cut(s)	532, 584
SmlI	CTYRAG	2 cut(s)	110, 436
SmoI	CTYRAG	2 cut(s)	110, 436
Sse9I	AATT	4 cut(s)	121, 457, 840, 944
SsiI	CCGC	7 cut(s)	91, 128, 174, 190, 271, 341, 761
SspDI	GGCGCC	1 cut(s)	4
SspMI	CTAG	2 cut(s)	222, 930
SstI	GAGCTC	2 cut(s)	23, 237
StyD4I	CCNGG	4 cut(s)	151, 158, 618, 749
StyI	CCWWGG	1 cut(s)	29
TaaI	ACNGT	1 cut(s)	879
TaiI	ACGT	1 cut(s)	412
TaqI	TCGA	7 cut(s)	36, 46, 530, 615, 673, 774, 897
TaqII	GACCGA	1 cut(s)	64
TasI	AATT	4 cut(s)	121, 457, 840, 944
TatI	WGTACW	2 cut(s)	987, 1016
TfiI	GAWTC	3 cut(s)	374, 441, 776
Tru1I	TTAA	5 cut(s)	282, 348, 552, 644, 1057
Tru9I	TTAA	5 cut(s)	282, 348, 552, 644, 1057
TscAI	CASTG	2 cut(s)	15, 985
TseI	GCWGC	7 cut(s)	293, 477, 589, 698, 788, 994, 997
TspDTI	ATGAA	2 cut(s)	768, 933
TspRI	CASTG	2 cut(s)	15, 985
VpaK11BI	GGWCC	4 cut(s)	13, 88, 203, 733
XbaI	TCTAGA	1 cut(s)	221
XceI	RCATGY	1 cut(s)	1042
XspI	CTAG	2 cut(s)	222, 930
ZrmI	AGTACT	1 cut(s)	989

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.