Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0012087

Physical Location & Seq

Genomic Coordinates Forward (+)

11761609 .. 11806786

Gene Structure 45178 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011690

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1020 bp

ATGGCGCCACTGGTCCAGAGCTCTCAGCCATGGGTCGAAAAATATCGGCCGAAGCAAGTGAAAGATGTGGCTCAGCAGGATGAGGTGGTCCGCGTCCTCACCAACACCCTAGAGACCTCAAATTGTCCTCATATGCTCTTCTATGGCCCGCCCGGAACTGGAAAAACCACCACCGCTCTCGCCATTGCCCACCAGCTTTTTGGACCTGAACTCTACAAGTCTAGAGTTTTGGAGCTCAATGCAAGTGATGATCGTGGGATCAATGTTGTTCGGACAAAGATCAAAGACTTTGCTGCTGTCGCTGTGGGTTCTGGTCAACGACAGGGGGGTTACCCTTGTCCACCATTTAAGATCATTATTCTTGATGAGGCGGATTCAATGACAGAAGATGCTCAGAATGCCCTGAGACGTACAATGGAAACCTACTCCAAAGTCACAAGATTCTTCTTTATATGTAATTATATCAGCAGGATCATAGAGCCACTTGCCTCAAGATGTGCAAAGTTCAGGTTTAAGCCACTTTCAGAGGATATAATGATCACCCGTGTACTGCACATTTGCCAAGAAGAAGGACTTGACCTGGAGCCAGAGGTTCTGTCAACACTAAGTACTATCTCACAAGGTGATCTTCGTCGAGCTATCACGTATTTGCAGTCAGCTGCTCGCTTATTTGGATCTTCTATTACTTCAAAGGACCTGATTAGTGTCTCTGGGGTAATTCCACAAGAGGTTGTCGATTCATTTTTTGCTGCTTGCAGAAGTGGCAACTTTGATTTGGCAAACAAGGAAGTCAACAATGTAATTGCAGAAGGATATCCAGTCTCCCAGATGTTTTCACAGTTGTTTGAGATTGTGGTTGGAGCAGATGATATATCAGATGAACAGAAGGCTAGAATATGCAAGAAATTGGGCGAAGCAGATAAGCGTCTTGTTGATGGCAGTGACGAATACTTGCAGCTACTGGATGTTGCAAGCAGCGCAATGCGAGCCATCTGTAACATGCAAGAAGAATTCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005657 GO:0005663 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010556 GO:0010557 GO:0010604 GO:0019219 GO:0019222 GO:0019899 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031390 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051338 GO:0051347 GO:0051716 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:1900262 GO:1900264 GO:1901360 GO:1901576 GO:2000112 GO:2000278 GO:2000573

KEGG Pathways

Metabolic & Signaling

ko03030 ko03420 ko03430 map03030 map03420 map03430

Pfam Domains

Protein Families

AAA Rep_fac_C

Protein Analysis

340

Amino Acids

37.67

Weight (kDa)

5.24

Isoelectric Point (pI)

41.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_pol3_delta2	PF13177	26 - 174	1.6e-11	DNA polymerase III, delta subunit
AAA	PF00004	45 - 173	2.2e-17	ATPase family associated with various cellular activities (AAA)
AAA_lid_RFC1	PF25361	181 - 220	2.8e-07	RFC1-like, AAA+ ATPase lid domain
RCF1-5-like_lid	PF21960	185 - 222	6.3e-09	RCF1/5-like, AAA+ ATPase lid domain
Rep_fac_C	PF08542	241 - 325	6.1e-21	Replication factor C C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012087)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21690 AT1G21690 AT1G21690 AT1G21690
fragaria_vesca	FvH4_2g27570 FvH4_2g27570
malus_domestica	MD15G1344500.v1.1
prunus_persica	Prupe.1G492200_v2.0.a1 Prupe.1G492200_v2.0.a1
pyrus_communis	pycom15g30770
rosa_chinensis	RchiOBHm_Chr6g0296411
rosa_laevigata	RLG00000011690
rosa_multiflora	Rmu_sc0008096.1_g000015
rosa_roxburghii	Rroxscaffold_7G00171570 Rroxscaffold_7G00178550
rosa_rugosa	Rorug06G0262100 Rorug06G0262200
rosa_samantha	Rh6BG381800
rosa_wichuraiana	Rw6G032570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	4
AccBSI	CCGCTC	1 cut(s)	176
AccII	CGCG	1 cut(s)	93
AciI	CCGC	4 cut(s)	91, 149, 174, 371
AclWI	GGATC	3 cut(s)	266, 479, 682
AcoI	YGGCCR	1 cut(s)	47
AcsI	RAATTY	1 cut(s)	1010
AcyI	GRCGYC	1 cut(s)	5
AdeI	CACNNNGTG	1 cut(s)	623
AfaI	GTAC	3 cut(s)	412, 549, 610
AfiI	CCNNNNNNNGG	1 cut(s)	158
AgsI	TTSAA	2 cut(s)	378, 690
AjnI	CCWGG	1 cut(s)	579
AluBI	AGCT	6 cut(s)	21, 196, 235, 638, 659, 958
AluI	AGCT	6 cut(s)	21, 196, 235, 638, 659, 958
Alw21I	GWGCWC	2 cut(s)	23, 237
Alw26I	GTCTC	4 cut(s)	107, 400, 712, 826
AlwI	GGATC	3 cut(s)	266, 479, 682
AlwNI	CAGNNNCTG	1 cut(s)	961
AoxI	GGCC	2 cut(s)	47, 145
ApeKI	GCWGC	5 cut(s)	293, 659, 749, 955, 975
ApoI	RAATTY	1 cut(s)	1010
AspLEI	GCGC	2 cut(s)	7, 980
AspS9I	GGNCC	5 cut(s)	13, 88, 146, 203, 694
AsuC2I	CCSGG	1 cut(s)	153
AsuHPI	GGTGA	3 cut(s)	91, 532, 635
AvaII	GGWCC	4 cut(s)	13, 88, 203, 694
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	2 cut(s)	23, 237
Bbv12I	GWGCWC	2 cut(s)	23, 237
BbvI	GCAGC	5 cut(s)	280, 646, 736, 967, 987
BccI	CCATC	2 cut(s)	929, 998
BciT130I	CCWGG	1 cut(s)	581
BclI	TGATCA	1 cut(s)	537
BcnI	CCSGG	1 cut(s)	153
BcoDI	GTCTC	4 cut(s)	107, 400, 712, 826
BfaI	CTAG	3 cut(s)	110, 222, 891
BfoI	RGCGCY	1 cut(s)	8
BisI	GCNGC	5 cut(s)	294, 660, 750, 956, 976
BlpI	GCTNAGC	1 cut(s)	72
BlsI	GCNGC	5 cut(s)	295, 661, 751, 957, 977
BmcAI	AGTACT	1 cut(s)	610
Bme1390I	CCNGG	2 cut(s)	153, 581
Bme18I	GGWCC	4 cut(s)	13, 88, 203, 694
BmgT120I	GGNCC	5 cut(s)	13, 88, 146, 203, 694
BmiI	GGNNCC	2 cut(s)	6, 585
BmrFI	CCNGG	2 cut(s)	153, 581
BmsI	GCATC	1 cut(s)	379
BpmI	CTGGAG	1 cut(s)	602
Bpu1102I	GCTNAGC	1 cut(s)	72
BpuEI	CTTGAG	1 cut(s)	475
BpuMI	CCSGG	1 cut(s)	153
BsaAI	YACGTR	1 cut(s)	645
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	107
BsaJI	CCNNGG	1 cut(s)	29
Bsc4I	CCNNNNNNNGG	1 cut(s)	158
Bse1I	ACTGG	4 cut(s)	15, 163, 818, 966
Bse3DI	GCAATG	2 cut(s)	183, 987
BseBI	CCWGG	1 cut(s)	581
BseDI	CCNNGG	1 cut(s)	29
BseGI	GGATG	2 cut(s)	85, 970
BseLI	CCNNNNNNNGG	1 cut(s)	158
BseMI	GCAATG	2 cut(s)	183, 987
BseMII	CTCAG	4 cut(s)	38, 86, 395, 407
BseNI	ACTGG	4 cut(s)	15, 163, 818, 966
BseX3I	CGGCCG	1 cut(s)	47
BseXI	GCAGC	5 cut(s)	280, 646, 736, 967, 987
BsgI	GTGCAG	1 cut(s)	536
Bsh1236I	CGCG	1 cut(s)	93
Bsh1285I	CGRYCG	1 cut(s)	50
BshFI	GGCC	2 cut(s)	49, 147
BshNI	GGYRCC	1 cut(s)	4
BsiEI	CGRYCG	1 cut(s)	50
BsiHKAI	GWGCWC	2 cut(s)	23, 237
BsiSI	CCGG	1 cut(s)	153
BslI	CCNNNNNNNGG	1 cut(s)	158
BsmAI	GTCTC	4 cut(s)	107, 400, 712, 826
BsmBI	CGTCTC	1 cut(s)	400
BsmI	GAATGC	1 cut(s)	403
BsnI	GGCC	2 cut(s)	49, 147
Bso31I	GGTCTC	1 cut(s)	107
Bsp1286I	GDGCHC	2 cut(s)	23, 237
Bsp143I	GATC	8 cut(s)	250, 258, 279, 351, 471, 537, 625, 674
Bsp1720I	GCTNAGC	1 cut(s)	72
Bsp19I	CCATGG	1 cut(s)	29
BspACI	CCGC	4 cut(s)	91, 149, 174, 371
BspANI	GGCC	2 cut(s)	49, 147
BspCNI	CTCAG	4 cut(s)	37, 85, 396, 406
BspFNI	CGCG	1 cut(s)	93
BspLI	GGNNCC	2 cut(s)	6, 585
BspPI	GGATC	3 cut(s)	266, 479, 682
BspQI	GCTCTTC	1 cut(s)	143
BspT107I	GGYRCC	1 cut(s)	4
BspTNI	GGTCTC	1 cut(s)	107
BsrBI	CCGCTC	1 cut(s)	176
BsrDI	GCAATG	2 cut(s)	183, 987
BsrI	ACTGG	4 cut(s)	15, 163, 818, 966
BssECI	CCNNGG	1 cut(s)	29
BssMI	GATC	8 cut(s)	250, 258, 279, 351, 471, 537, 625, 674
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	1 cut(s)	29
Bst2UI	CCWGG	1 cut(s)	581
Bst4CI	ACNGT	1 cut(s)	840
Bst6I	CTCTTC	1 cut(s)	143
BstACI	GRCGYC	1 cut(s)	5
BstBAI	YACGTR	1 cut(s)	645
BstC8I	GCNNGC	5 cut(s)	149, 664, 754, 973, 987
BstDEI	CTNAG	5 cut(s)	24, 72, 393, 404, 605
BstDSI	CCRYGG	1 cut(s)	29
BstEII	GGTNACC	1 cut(s)	329
BstF5I	GGATG	2 cut(s)	85, 970
BstFNI	CGCG	1 cut(s)	93
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	2 cut(s)	7, 980
BstKTI	GATC	8 cut(s)	253, 261, 282, 354, 474, 540, 628, 677
BstMAI	GTCTC	4 cut(s)	107, 400, 712, 826
BstMBI	GATC	8 cut(s)	250, 258, 279, 351, 471, 537, 625, 674
BstMCI	CGRYCG	1 cut(s)	50
BstMWI	GCNNNNNNNGC	5 cut(s)	299, 398, 762, 977, 986
BstNI	CCWGG	1 cut(s)	581
BstNSI	RCATGY	1 cut(s)	1003
BstPI	GGTNACC	1 cut(s)	329
BstSCI	CCNGG	2 cut(s)	151, 579
BstUI	CGCG	1 cut(s)	93
BstV1I	GCAGC	5 cut(s)	280, 646, 736, 967, 987
BstX2I	RGATCY	1 cut(s)	674
BstXI	CCANNNNNNTGG	1 cut(s)	200
BstYI	RGATCY	1 cut(s)	674
BstZI	CGGCCG	1 cut(s)	47
BsuRI	GGCC	2 cut(s)	49, 147
BtgI	CCRYGG	1 cut(s)	29
BtsCI	GGATG	2 cut(s)	85, 970
BtsI	GCAGTG	1 cut(s)	946
BtsIMutI	CAGTG	2 cut(s)	8, 946
Cac8I	GCNNGC	5 cut(s)	149, 664, 754, 973, 987
CaiI	CAGNNNCTG	1 cut(s)	961
CfoI	GCGC	2 cut(s)	7, 980
Cfr13I	GGNCC	5 cut(s)	13, 88, 146, 203, 694
CseI	GACGC	2 cut(s)	82, 914
Csp6I	GTAC	3 cut(s)	411, 548, 609
CviAII	CATG	2 cut(s)	30, 1000
CviQI	GTAC	3 cut(s)	411, 548, 609
DdeI	CTNAG	5 cut(s)	24, 72, 393, 404, 605
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	8 cut(s)	252, 260, 281, 353, 473, 539, 627, 676
DpnII	GATC	8 cut(s)	250, 258, 279, 351, 471, 537, 625, 674
DraIII	CACNNNGTG	1 cut(s)	623
EaeI	YGGCCR	1 cut(s)	47
EagI	CGGCCG	1 cut(s)	47
Eam1104I	CTCTTC	1 cut(s)	143
EarI	CTCTTC	1 cut(s)	143
EciI	GGCGGA	1 cut(s)	386
Ecl136II	GAGCTC	2 cut(s)	21, 235
EclXI	CGGCCG	1 cut(s)	47
Eco130I	CCWWGG	1 cut(s)	29
Eco24I	GRGCYC	2 cut(s)	23, 237
Eco31I	GGTCTC	1 cut(s)	107
Eco32I	GATATC	1 cut(s)	815
Eco47I	GGWCC	4 cut(s)	13, 88, 203, 694
Eco52I	CGGCCG	1 cut(s)	47
Eco53kI	GAGCTC	2 cut(s)	21, 235
Eco91I	GGTNACC	1 cut(s)	329
EcoICRI	GAGCTC	2 cut(s)	21, 235
EcoO109I	RGGNCCY	1 cut(s)	694
EcoO65I	GGTNACC	1 cut(s)	329
EcoRI	GAATTC	1 cut(s)	1010
EcoRII	CCWGG	1 cut(s)	579
EcoRV	GATATC	1 cut(s)	815
EcoT14I	CCWWGG	1 cut(s)	29
EcoT38I	GRGCYC	2 cut(s)	23, 237
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	1 cut(s)	29
Esp3I	CGTCTC	1 cut(s)	400
FaeI	CATG	2 cut(s)	33, 1003
FalI	AAGNNNNNCTT	4 cut(s)	558, 590, 612, 644
FatI	CATG	2 cut(s)	29, 999
FauI	CCCGC	1 cut(s)	156
FauNDI	CATATG	1 cut(s)	132
FbaI	TGATCA	1 cut(s)	537
Fnu4HI	GCNGC	5 cut(s)	294, 660, 750, 956, 976
FokI	GGATG	2 cut(s)	92, 977
FriOI	GRGCYC	2 cut(s)	23, 237
Fsp4HI	GCNGC	5 cut(s)	294, 660, 750, 956, 976
FspBI	CTAG	3 cut(s)	110, 222, 891
GlaI	GCGC	2 cut(s)	6, 979
GluI	GCNGC	5 cut(s)	294, 660, 750, 956, 976
GsuI	CTGGAG	1 cut(s)	602
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	2 cut(s)	49, 147
HapII	CCGG	1 cut(s)	153
HgaI	GACGC	2 cut(s)	82, 914
HhaI	GCGC	2 cut(s)	7, 980
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	2 cut(s)	33, 1003
Hin6I	GCGC	2 cut(s)	5, 978
HinP1I	GCGC	2 cut(s)	5, 978
HincII	GTYRAC	3 cut(s)	317, 600, 793
HindII	GTYRAC	3 cut(s)	317, 600, 793
HinfI	GANTC	3 cut(s)	374, 441, 737
HpaII	CCGG	1 cut(s)	153
HphI	GGTGA	3 cut(s)	91, 532, 635
Hpy166II	GTNNAC	5 cut(s)	317, 341, 548, 600, 793
Hpy188I	TCNGA	4 cut(s)	273, 396, 526, 877
Hpy188III	TCNNGA	4 cut(s)	16, 222, 362, 492
Hpy8I	GTNNAC	5 cut(s)	317, 341, 548, 600, 793
Hpy99I	CGWCG	1 cut(s)	636
HpyAV	CCTTC	3 cut(s)	563, 803, 880
HpyCH4III	ACNGT	1 cut(s)	840
HpyCH4IV	ACGT	2 cut(s)	409, 644
HpyF10VI	GCNNNNNNNGC	5 cut(s)	299, 398, 762, 977, 986
HpyF3I	CTNAG	5 cut(s)	24, 72, 393, 404, 605
HpySE526I	ACGT	2 cut(s)	409, 644
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	2 cut(s)	33, 1003
HspAI	GCGC	2 cut(s)	5, 978
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	1 cut(s)	537
Kzo9I	GATC	8 cut(s)	250, 258, 279, 351, 471, 537, 625, 674
LguI	GCTCTTC	1 cut(s)	143
LmnI	GCTCC	3 cut(s)	232, 583, 860
Lsp1109I	GCAGC	5 cut(s)	280, 646, 736, 967, 987
LweI	GCATC	1 cut(s)	379
MaeI	CTAG	3 cut(s)	110, 222, 891
MaeII	ACGT	2 cut(s)	409, 644
MaeIII	GTNAC	4 cut(s)	329, 433, 941, 995
MalI	GATC	8 cut(s)	252, 260, 281, 353, 473, 539, 627, 676
MbiI	CCGCTC	1 cut(s)	176
MboI	GATC	8 cut(s)	250, 258, 279, 351, 471, 537, 625, 674
MboII	GAAGA	7 cut(s)	130, 398, 436, 578, 620, 669, 1019
MflI	RGATCY	1 cut(s)	674
MhlI	GDGCHC	2 cut(s)	23, 237
MluCI	AATT	6 cut(s)	121, 457, 717, 801, 905, 1010
Mly113I	GGCGCC	1 cut(s)	5
MmeI	TCCRAC	1 cut(s)	838
MnlI	CCTC	9 cut(s)	76, 107, 127, 138, 361, 499, 520, 583, 721
MseI	TTAA	3 cut(s)	348, 513, 1018
MspA1I	CMGCKG	1 cut(s)	659
MspI	CCGG	1 cut(s)	153
MspR9I	CCNGG	2 cut(s)	153, 581
Mva1269I	GAATGC	1 cut(s)	403
MvaI	CCWGG	1 cut(s)	581
MvnI	CGCG	1 cut(s)	93
MwoI	GCNNNNNNNGC	5 cut(s)	299, 398, 762, 977, 986
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	1 cut(s)	153
NcoI	CCATGG	1 cut(s)	29
NdeI	CATATG	1 cut(s)	132
NdeII	GATC	8 cut(s)	250, 258, 279, 351, 471, 537, 625, 674
NlaIII	CATG	2 cut(s)	33, 1003
NlaIV	GGNNCC	2 cut(s)	6, 585
NmuCI	GTSAC	2 cut(s)	433, 941
NspI	RCATGY	1 cut(s)	1003
PciSI	GCTCTTC	1 cut(s)	143
PctI	GAATGC	1 cut(s)	403
PfeI	GAWTC	3 cut(s)	374, 441, 737
PkrI	GCNGC	5 cut(s)	295, 661, 751, 957, 977
PluTI	GGCGCC	1 cut(s)	8
Ppu21I	YACGTR	1 cut(s)	645
PpuMI	RGGWCCY	1 cut(s)	694
Psp124BI	GAGCTC	2 cut(s)	23, 237
Psp5II	RGGWCCY	1 cut(s)	694
Psp6I	CCWGG	1 cut(s)	579
PspEI	GGTNACC	1 cut(s)	329
PspGI	CCWGG	1 cut(s)	579
PspN4I	GGNNCC	2 cut(s)	6, 585
PspPI	GGNCC	5 cut(s)	13, 88, 146, 203, 694
PspPPI	RGGWCCY	1 cut(s)	694
PstNI	CAGNNNCTG	1 cut(s)	961
PsuI	RGATCY	1 cut(s)	674
PvuII	CAGCTG	1 cut(s)	659
RsaI	GTAC	3 cut(s)	412, 549, 610
RsaNI	GTAC	3 cut(s)	411, 548, 609
SacI	GAGCTC	2 cut(s)	23, 237
SapI	GCTCTTC	1 cut(s)	143
SaqAI	TTAA	3 cut(s)	348, 513, 1018
SatI	GCNGC	5 cut(s)	294, 660, 750, 956, 976
Sau3AI	GATC	8 cut(s)	250, 258, 279, 351, 471, 537, 625, 674
Sau96I	GGNCC	5 cut(s)	13, 88, 146, 203, 694
ScaI	AGTACT	1 cut(s)	610
ScrFI	CCNGG	2 cut(s)	153, 581
SduI	GDGCHC	2 cut(s)	23, 237
SfaNI	GCATC	1 cut(s)	379
SfoI	GGCGCC	1 cut(s)	6
SinI	GGWCC	4 cut(s)	13, 88, 203, 694
SmlI	CTYRAG	1 cut(s)	490
SmoI	CTYRAG	1 cut(s)	490
Sse9I	AATT	6 cut(s)	121, 457, 717, 801, 905, 1010
SsiI	CCGC	4 cut(s)	91, 149, 174, 371
SspDI	GGCGCC	1 cut(s)	4
SspMI	CTAG	3 cut(s)	110, 222, 891
SstI	GAGCTC	2 cut(s)	23, 237
StyD4I	CCNGG	2 cut(s)	151, 579
StyI	CCWWGG	1 cut(s)	29
TaaI	ACNGT	1 cut(s)	840
TaiI	ACGT	2 cut(s)	412, 647
TaqI	TCGA	3 cut(s)	36, 634, 735
TasI	AATT	6 cut(s)	121, 457, 717, 801, 905, 1010
TatI	WGTACW	2 cut(s)	547, 608
TfiI	GAWTC	3 cut(s)	374, 441, 737
Tru1I	TTAA	3 cut(s)	348, 513, 1018
Tru9I	TTAA	3 cut(s)	348, 513, 1018
TscAI	CASTG	2 cut(s)	15, 946
TseFI	GTSAC	2 cut(s)	433, 941
TseI	GCWGC	5 cut(s)	293, 659, 749, 955, 975
Tsp45I	GTSAC	2 cut(s)	433, 941
TspDTI	ATGAA	2 cut(s)	729, 894
TspRI	CASTG	2 cut(s)	15, 946
VpaK11BI	GGWCC	4 cut(s)	13, 88, 203, 694
XapI	RAATTY	1 cut(s)	1010
XbaI	TCTAGA	1 cut(s)	221
XceI	RCATGY	1 cut(s)	1003
XcmI	CCANNNNNNNNNTGG	1 cut(s)	197
XspI	CTAG	3 cut(s)	110, 222, 891
ZrmI	AGTACT	1 cut(s)	610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.