FvH4_2g30661

Cryptochrome DASH

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0016105
Physical Location & Seq
Reverse (-)
23712003 .. 23715624
3622 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g30661.t1

Sequence Viewer

Length: 1707 bp
ATGGCTGTTCTTCACTCCTCGCTTTCTCCATACTCTCTCAAAAAGCTCATTCTCCTCCCATACCCCAAACCCAGAAAACTACATCATTTCCAAGCCATGAGCTCCAGCTCCAGACCCGAACCCGCCGCCTTGGTCCACAAGGTTCCGGGTCTCGACCCGGACGAAATGGACCGTGTCTTAAACCAAACCTTCCAGAGGTACACCACCTCCTCTTCTATCAAGAGAACCGGCAATGGTGTCGCCATTGTTTGGTTTCGCAACGATCTCAGGGTTCTCGACAATGAGGCTCTCTATAAGGCTTGGCTCTCCTCCCAGCAGGTTTTGCCTGTCTATTGCGTTGATCCCAGGCTCTTTGGTTCCACCTATCACTTTGGTTTCCCTAAAACTGGAGCGTTGAGAGCGCAGTTTCTTGTTGAATCCTTGGATGACTTGAGGAAGAATCTAACGAAGCGGGGTCTTAACTTGCTTATTCAACATGGGAAGCCTGAGGAGGTTCTGCCTTCTCTTGCAGAAACATATGGAGCTCACACAGTATATGCCCAAAAAGAAACTTGCAGTGAGGAGCTGCGTGTCGAAAGATTGGTCAGCAAAGGTCTGAGGCGAGTGGTGTTACAGAGTCCTGTGAATAATCCCAAGCTACAACTTATATGGGGCACCACTATGTACCATATAGATGACCTCCCGTTTGATACAAGTAGTTTACCGGATGTCTATACTCAGTTTCGCAAGTCTGTTGAAGCGAAATGCACAGTTCGTGGCTGCATTAGAATGCCAGCATCTCTAGGTCCAACACCCACCATTGGGGATTGGGGATGTGTTCCTTCATTAGATCAGTTCGGACTTCAACATCAAAATGTAAGCCTAGGAATGAAGTTTGTTGGGGGTGAAAGTGCAGCATTGGGCAGATTAAATGAGTATTTCTGGAAGAAGGATCTGCTAAGTATATATAAAAAGACCAGAAATGGGATGTTAGGACCTGATTATTCGACAAAATTTTCTCCCTGGCTTGCTTCAGGAAGCCTTTCTCCTCGTCTCATACACGAAGAGGTAACGAGGTATGAAAAAGAAAGGCAAGCAAATGATTCCACATACTGGGTATTGTTCGAATTGATATGGAGGGATTACTTCAGGTTTCTATCTGTAAAATATGGGAATTCTCTTTTCCATTCAGGTGGCCCAAGAAAATTGGAGCATAGATGGAGCCAAGAAAAGACTTTTGAGTCCTGGAGAGATGGCCAGACAGGGTACCCACTCATAGATGCGAACATGAAAGAGCTTTCAATCACTGGATTCATGTCAAATCGGGGAAGACAGATTGTATGTTCGTTTCTGGTTCGAGATATGGGTATTGACTGGCGCATGGGAGCTGAATGGTTTGAGACATGCCTGTTGGATTATGACCCTTGTTCCAATTATGGTAATTGGACCTATGGAGCAGGAGTTGGAAATGACCCCAGGGAAGATCGTTACTTCAGCATTCCAAAACAAGCACAGAATTATGATCCTGAAGGCGAGTATGTGGCGTACTGGCTCCCACAGCTGAAGTCACTTCCAAAAGAGAAAAGGCACTTCCCTGGAATGGCATATATCAAGCAGGTTGTCCCTCTCAAGTTTGGTAATGCCGGTAAGTACCAAAACCACAGCAAAGCCTCGACTGCCAGAGGCACAAACTTTGGAGGAAGACAAACAAAAGGGTCCAGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_photolyase FAD_binding_7

Protein Analysis

569

Amino Acids

64.91

Weight (kDa)

9.38

Isoelectric Point (pI)

35.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_photolyase PF00875 81 - 250 1.7e-38 DNA photolyase
FAD_binding_7 PF03441 367 - 529 1.8e-51 FAD binding domain of DNA photolyase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016105)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G24850
fragaria_vesca FvH4_2g30661
malus_domestica MD15G1110200.v1.1
prunus_persica Prupe.1G462400_v2.0.a1
pyrus_communis pycom15g10040
rosa_chinensis RchiOBHm_Chr6g0312231
rosa_laevigata RLG00000010340
rosa_multiflora Rmu_sc0010924.1_g000003
rosa_roxburghii Rroxscaffold_7G00156930
rosa_rugosa Rorug06G0394300
rosa_samantha Rh6AG511200 Rh6BG522200 Rh6CG528000 Rh6DG513400
rosa_wichuraiana Rw6G044460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1219
Acc36I ACCTGC 2 cut(s) 307, 1585
Acc65I GGTACC 1 cut(s) 1245
AccB1I GGYRCC 2 cut(s) 653, 1245
AccB7I CCANNNNNTGG 2 cut(s) 249, 1092
AciI CCGC 3 cut(s) 123, 126, 451
AclWI GGATC 3 cut(s) 335, 939, 1496
AcoI YGGCCR 1 cut(s) 1234
AcsI RAATTY 2 cut(s) 992, 1153
AcuI CTGAAG 5 cut(s) 996, 1111, 1456, 1527, 1562
AfaI GTAC 5 cut(s) 200, 665, 1247, 1526, 1631
AfiI CCNNNNNNNGG 8 cut(s) 195, 249, 386, 800, 801, 963, 1092, 1579
AgsI TTSAA 5 cut(s) 416, 473, 737, 845, 1281
AjnI CCWGG 6 cut(s) 344, 1001, 1223, 1454, 1573, 1697
AluBI AGCT 9 cut(s) 46, 102, 108, 524, 565, 637, 1276, 1367, 1540
AluI AGCT 9 cut(s) 46, 102, 108, 524, 565, 637, 1276, 1367, 1540
Alw21I GWGCWC 2 cut(s) 104, 526
Alw26I GTCTC 3 cut(s) 155, 1037, 1373
AlwI GGATC 3 cut(s) 335, 939, 1496
AoxI GGCC 2 cut(s) 1174, 1234
ApeKI GCWGC 3 cut(s) 565, 759, 893
ApoI RAATTY 2 cut(s) 992, 1153
ArsI GACNNNNNNTTYG 4 cut(s) 567, 599, 668, 700
Asp700I GAANNNNTTC 1 cut(s) 1021
Asp718I GGTACC 1 cut(s) 1245
AspA2I CCTAGG 1 cut(s) 862
AspLEI GCGC 2 cut(s) 403, 1359
AspS9I GGNCC 7 cut(s) 133, 169, 785, 974, 1175, 1425, 1695
AsuC2I CCSGG 2 cut(s) 147, 158
AsuHPI GGTGA 1 cut(s) 896
AsuII TTCGAA 1 cut(s) 1104
AvaII GGWCC 6 cut(s) 133, 169, 785, 974, 1425, 1695
AvrII CCTAGG 1 cut(s) 862
AxyI CCTNAGG 1 cut(s) 486
BaeGI GKGCMC 1 cut(s) 656
BalI TGGCCA 1 cut(s) 1236
BanI GGYRCC 2 cut(s) 653, 1245
BanII GRGCYC 2 cut(s) 104, 526
BbsI GAAGAC 2 cut(s) 1315, 1687
Bbv12I GWGCWC 2 cut(s) 104, 526
BbvI GCAGC 3 cut(s) 552, 746, 905
BccI CCATC 2 cut(s) 1191, 1226
BcgI CGANNNNNNTGC 2 cut(s) 220, 254
BciT130I CCWGG 6 cut(s) 346, 1003, 1225, 1456, 1575, 1699
BcnI CCSGG 2 cut(s) 147, 158
BcoDI GTCTC 3 cut(s) 155, 1037, 1373
BfaI CTAG 2 cut(s) 782, 863
BfuAI ACCTGC 2 cut(s) 307, 1585
BisI GCNGC 4 cut(s) 126, 566, 760, 894
BlnI CCTAGG 1 cut(s) 862
BlsI GCNGC 4 cut(s) 127, 567, 761, 895
Bme1390I CCNGG 8 cut(s) 147, 158, 346, 1003, 1225, 1456, 1575, 1699
Bme18I GGWCC 6 cut(s) 133, 169, 785, 974, 1425, 1695
BmgT120I GGNCC 7 cut(s) 133, 169, 785, 974, 1175, 1425, 1695
BmiI GGNNCC 7 cut(s) 144, 358, 655, 1202, 1247, 1532, 1696
BmrFI CCNGG 8 cut(s) 147, 158, 346, 1003, 1225, 1456, 1575, 1699
BmrI ACTGGG 1 cut(s) 1102
BmsI GCATC 2 cut(s) 785, 1249
BmuI ACTGGG 1 cut(s) 1102
BpiI GAAGAC 2 cut(s) 1315, 1687
BpmI CTGGAG 4 cut(s) 88, 94, 408, 1246
Bpu14I TTCGAA 1 cut(s) 1104
BpuEI CTTGAG 2 cut(s) 451, 1592
BpuMI CCSGG 2 cut(s) 147, 158
BsaI GGTCTC 1 cut(s) 155
BsaJI CCNNGG 8 cut(s) 129, 344, 420, 862, 1001, 1454, 1455, 1573
BsaWI WCCGGW 1 cut(s) 703
BsaXI ACNNNNNCTCC 4 cut(s) 191, 221, 1425, 1455
Bsc4I CCNNNNNNNGG 8 cut(s) 195, 249, 386, 800, 801, 963, 1092, 1579
Bse118I RCCGGY 2 cut(s) 227, 1622
Bse1I ACTGG 5 cut(s) 391, 1097, 1291, 1358, 1532
Bse21I CCTNAGG 1 cut(s) 486
Bse3DI GCAATG 1 cut(s) 238
BseBI CCWGG 6 cut(s) 346, 1003, 1225, 1456, 1575, 1699
BseDI CCNNGG 8 cut(s) 129, 344, 420, 862, 1001, 1454, 1455, 1573
BseGI GGATG 4 cut(s) 430, 712, 818, 972
BseLI CCNNNNNNNGG 8 cut(s) 195, 249, 386, 800, 801, 963, 1092, 1579
BseMI GCAATG 1 cut(s) 238
BseMII CTCAG 4 cut(s) 280, 477, 587, 731
BseNI ACTGG 5 cut(s) 391, 1097, 1291, 1358, 1532
BseRI GAGGAG 7 cut(s) 7, 44, 199, 298, 503, 575, 1017
BseSI GKGCMC 1 cut(s) 656
BseXI GCAGC 3 cut(s) 552, 746, 905
BseYI CCCAGC 1 cut(s) 312
BsgI GTGCAG 1 cut(s) 912
BshFI GGCC 2 cut(s) 1176, 1236
BshNI GGYRCC 2 cut(s) 653, 1245
BsiHKAI GWGCWC 2 cut(s) 104, 526
BsiSI CCGG 5 cut(s) 146, 158, 228, 704, 1623
BslFI GGGAC 1 cut(s) 1586
BslI CCNNNNNNNGG 8 cut(s) 195, 249, 386, 800, 801, 963, 1092, 1579
BsmAI GTCTC 3 cut(s) 155, 1037, 1373
BsmBI CGTCTC 1 cut(s) 1037
BsmFI GGGAC 1 cut(s) 1586
BsmI GAATGC 2 cut(s) 774, 1476
BsnI GGCC 2 cut(s) 1176, 1236
Bso31I GGTCTC 1 cut(s) 155
Bsp119I TTCGAA 1 cut(s) 1104
Bsp1286I GDGCHC 3 cut(s) 104, 526, 656
Bsp143I GATC 6 cut(s) 262, 340, 829, 931, 1462, 1501
BspACI CCGC 3 cut(s) 123, 126, 451
BspANI GGCC 2 cut(s) 1176, 1236
BspCNI CTCAG 4 cut(s) 279, 478, 588, 730
BspLI GGNNCC 7 cut(s) 144, 358, 655, 1202, 1247, 1532, 1696
BspMI ACCTGC 2 cut(s) 307, 1585
BspPI GGATC 3 cut(s) 335, 939, 1496
BspT104I TTCGAA 1 cut(s) 1104
BspT107I GGYRCC 2 cut(s) 653, 1245
BspTNI GGTCTC 1 cut(s) 155
BsrDI GCAATG 1 cut(s) 238
BsrFI RCCGGY 2 cut(s) 227, 1622
BsrI ACTGG 5 cut(s) 391, 1097, 1291, 1358, 1532
BssAI RCCGGY 2 cut(s) 227, 1622
BssECI CCNNGG 8 cut(s) 129, 344, 420, 862, 1001, 1454, 1455, 1573
BssMI GATC 6 cut(s) 262, 340, 829, 931, 1462, 1501
BssT1I CCWWGG 3 cut(s) 129, 420, 862
Bst2UI CCWGG 6 cut(s) 346, 1003, 1225, 1456, 1575, 1699
Bst4CI ACNGT 3 cut(s) 173, 532, 751
Bst6I CTCTTC 2 cut(s) 217, 1038
BstAPI GCANNNNNTGC 1 cut(s) 322
BstBI TTCGAA 1 cut(s) 1104
BstC8I GCNNGC 3 cut(s) 774, 1008, 1074
BstDEI CTNAG 5 cut(s) 266, 486, 596, 717, 938
BstENI CCTNNNNNAGG 1 cut(s) 193
BstF5I GGATG 4 cut(s) 430, 712, 818, 972
BstHHI GCGC 2 cut(s) 403, 1359
BstKTI GATC 6 cut(s) 265, 343, 832, 934, 1465, 1504
BstMAI GTCTC 3 cut(s) 155, 1037, 1373
BstMBI GATC 6 cut(s) 262, 340, 829, 931, 1462, 1501
BstMWI GCNNNNNNNGC 4 cut(s) 322, 398, 1537, 1655
BstNI CCWGG 6 cut(s) 346, 1003, 1225, 1456, 1575, 1699
BstNSI RCATGY 1 cut(s) 1386
BstSCI CCNGG 8 cut(s) 145, 156, 344, 1001, 1223, 1454, 1573, 1697
BstSLI GKGCMC 1 cut(s) 656
BstV1I GCAGC 3 cut(s) 552, 746, 905
BstV2I GAAGAC 2 cut(s) 1315, 1687
BstX2I RGATCY 1 cut(s) 931
BstXI CCANNNNNNTGG 1 cut(s) 1172
BstYI RGATCY 1 cut(s) 931
Bsu36I CCTNAGG 1 cut(s) 486
BsuRI GGCC 2 cut(s) 1176, 1236
BtsCI GGATG 4 cut(s) 430, 712, 818, 972
BtsI GCAGTG 1 cut(s) 562
BtsIMutI CAGTG 2 cut(s) 562, 1284
BveI ACCTGC 2 cut(s) 307, 1585
Cac8I GCNNGC 3 cut(s) 774, 1008, 1074
CfoI GCGC 2 cut(s) 403, 1359
Cfr10I RCCGGY 2 cut(s) 227, 1622
Cfr13I GGNCC 7 cut(s) 133, 169, 785, 974, 1175, 1425, 1695
Csp6I GTAC 5 cut(s) 199, 664, 1246, 1525, 1630
CviAII CATG 6 cut(s) 97, 476, 1267, 1294, 1360, 1383
CviQI GTAC 5 cut(s) 199, 664, 1246, 1525, 1630
DdeI CTNAG 5 cut(s) 266, 486, 596, 717, 938
DpnI GATC 6 cut(s) 264, 342, 831, 933, 1464, 1503
DpnII GATC 6 cut(s) 262, 340, 829, 931, 1462, 1501
DrdI GACNNNNNNGTC 1 cut(s) 1219
DseDI GACNNNNNNGTC 1 cut(s) 1219
EaeI YGGCCR 1 cut(s) 1234
Eam1104I CTCTTC 2 cut(s) 217, 1038
EarI CTCTTC 2 cut(s) 217, 1038
Ecl136II GAGCTC 2 cut(s) 102, 524
Eco130I CCWWGG 3 cut(s) 129, 420, 862
Eco24I GRGCYC 2 cut(s) 104, 526
Eco31I GGTCTC 1 cut(s) 155
Eco47I GGWCC 6 cut(s) 133, 169, 785, 974, 1425, 1695
Eco53kI GAGCTC 2 cut(s) 102, 524
Eco57I CTGAAG 5 cut(s) 996, 1111, 1456, 1527, 1562
Eco81I CCTNAGG 1 cut(s) 486
EcoICRI GAGCTC 2 cut(s) 102, 524
EcoNI CCTNNNNNAGG 1 cut(s) 193
EcoO109I RGGNCCY 1 cut(s) 974
EcoRI GAATTC 1 cut(s) 1153
EcoRII CCWGG 6 cut(s) 344, 1001, 1223, 1454, 1573, 1697
EcoT14I CCWWGG 3 cut(s) 129, 420, 862
EcoT38I GRGCYC 2 cut(s) 104, 526
ErhI CCWWGG 3 cut(s) 129, 420, 862
Esp3I CGTCTC 1 cut(s) 1037
FaeI CATG 6 cut(s) 100, 479, 1270, 1297, 1363, 1386
FaqI GGGAC 1 cut(s) 1586
FatI CATG 6 cut(s) 96, 475, 1266, 1293, 1359, 1382
FauI CCCGC 2 cut(s) 130, 444
FauNDI CATATG 1 cut(s) 517
Fnu4HI GCNGC 4 cut(s) 126, 566, 760, 894
FokI GGATG 4 cut(s) 437, 719, 825, 979
FriOI GRGCYC 2 cut(s) 104, 526
Fsp4HI GCNGC 4 cut(s) 126, 566, 760, 894
FspBI CTAG 2 cut(s) 782, 863
GlaI GCGC 2 cut(s) 402, 1358
GluI GCNGC 4 cut(s) 126, 566, 760, 894
GsaI CCCAGC 1 cut(s) 316
GsuI CTGGAG 4 cut(s) 88, 94, 408, 1246
HaeIII GGCC 2 cut(s) 1176, 1236
HapII CCGG 5 cut(s) 146, 158, 228, 704, 1623
HhaI GCGC 2 cut(s) 403, 1359
Hin1II CATG 6 cut(s) 100, 479, 1270, 1297, 1363, 1386
Hin6I GCGC 2 cut(s) 401, 1357
HinP1I GCGC 2 cut(s) 401, 1357
HinfI GANTC 6 cut(s) 416, 439, 616, 1082, 1220, 1290
HpaII CCGG 5 cut(s) 146, 158, 228, 704, 1623
HphI GGTGA 1 cut(s) 896
Hpy166II GTNNAC 3 cut(s) 136, 201, 701
Hpy188I TCNGA 2 cut(s) 597, 839
Hpy188III TCNNGA 9 cut(s) 111, 152, 193, 220, 275, 922, 1014, 1337, 1505
Hpy8I GTNNAC 3 cut(s) 136, 201, 701
HpyAV CCTTC 5 cut(s) 199, 510, 831, 922, 1502
HpyCH4III ACNGT 3 cut(s) 173, 532, 751
HpyCH4V TGCA 5 cut(s) 509, 555, 747, 762, 893
HpyF10VI GCNNNNNNNGC 4 cut(s) 322, 398, 1537, 1655
HpyF3I CTNAG 5 cut(s) 266, 486, 596, 717, 938
Hsp92II CATG 6 cut(s) 100, 479, 1270, 1297, 1363, 1386
HspAI GCGC 2 cut(s) 401, 1357
KpnI GGTACC 1 cut(s) 1249
Kzo9I GATC 6 cut(s) 262, 340, 829, 931, 1462, 1501
Lsp1109I GCAGC 3 cut(s) 552, 746, 905
LweI GCATC 2 cut(s) 785, 1249
MaeI CTAG 2 cut(s) 782, 863
MaeIII GTNAC 4 cut(s) 609, 1048, 1466, 1545
MalI GATC 6 cut(s) 264, 342, 831, 933, 1464, 1503
MboI GATC 6 cut(s) 262, 340, 829, 931, 1462, 1501
MboII GAAGA 7 cut(s) 204, 448, 937, 1055, 1320, 1472, 1692
MflI RGATCY 1 cut(s) 931
MhlI GDGCHC 3 cut(s) 104, 526, 656
MlsI TGGCCA 1 cut(s) 1236
MluCI AATT 7 cut(s) 992, 1106, 1153, 1184, 1411, 1420, 1495
MluNI TGGCCA 1 cut(s) 1236
MlyI GAGTC 2 cut(s) 625, 1229
MmeI TCCRAC 3 cut(s) 812, 1371, 1423
Mox20I TGGCCA 1 cut(s) 1236
MroXI GAANNNNTTC 1 cut(s) 1021
MscI TGGCCA 1 cut(s) 1236
MseI TTAA 3 cut(s) 179, 459, 908
MslI CAYNNNNRTG 5 cut(s) 659, 672, 767, 852, 1170
Msp20I TGGCCA 1 cut(s) 1236
MspA1I CMGCKG 1 cut(s) 1540
MspI CCGG 5 cut(s) 146, 158, 228, 704, 1623
MspR9I CCNGG 8 cut(s) 147, 158, 346, 1003, 1225, 1456, 1575, 1699
Mva1269I GAATGC 2 cut(s) 774, 1476
MvaI CCWGG 6 cut(s) 346, 1003, 1225, 1456, 1575, 1699
MwoI GCNNNNNNNGC 4 cut(s) 322, 398, 1537, 1655
NciI CCSGG 2 cut(s) 147, 158
NdeI CATATG 1 cut(s) 517
NdeII GATC 6 cut(s) 262, 340, 829, 931, 1462, 1501
NlaIII CATG 6 cut(s) 100, 479, 1270, 1297, 1363, 1386
NlaIV GGNNCC 7 cut(s) 144, 358, 655, 1202, 1247, 1532, 1696
NmuCI GTSAC 1 cut(s) 1545
NspI RCATGY 1 cut(s) 1386
NspV TTCGAA 1 cut(s) 1104
PasI CCCWGGG 1 cut(s) 1455
PcsI WCGNNNNNNNCGW 1 cut(s) 159
PctI GAATGC 2 cut(s) 774, 1476
PdmI GAANNNNTTC 1 cut(s) 1021
PfeI GAWTC 4 cut(s) 416, 439, 1082, 1290
PflFI GACNNNGTC 1 cut(s) 173
PflMI CCANNNNNTGG 2 cut(s) 249, 1092
PfoI TCCNGGA 2 cut(s) 1223, 1697
PkrI GCNGC 4 cut(s) 127, 567, 761, 895
PleI GAGTC 2 cut(s) 624, 1228
PpsI GAGTC 2 cut(s) 624, 1228
PpuMI RGGWCCY 1 cut(s) 974
Psp124BI GAGCTC 2 cut(s) 104, 526
Psp5II RGGWCCY 1 cut(s) 974
Psp6I CCWGG 6 cut(s) 344, 1001, 1223, 1454, 1573, 1697
PspFI CCCAGC 1 cut(s) 312
PspGI CCWGG 6 cut(s) 344, 1001, 1223, 1454, 1573, 1697
PspN4I GGNNCC 7 cut(s) 144, 358, 655, 1202, 1247, 1532, 1696
PspPI GGNCC 7 cut(s) 133, 169, 785, 974, 1175, 1425, 1695
PspPPI RGGWCCY 1 cut(s) 974
PsuI RGATCY 1 cut(s) 931
PsyI GACNNNGTC 1 cut(s) 173
PvuII CAGCTG 1 cut(s) 1540
RsaI GTAC 5 cut(s) 200, 665, 1247, 1526, 1631
RsaNI GTAC 5 cut(s) 199, 664, 1246, 1525, 1630
RseI CAYNNNNRTG 5 cut(s) 659, 672, 767, 852, 1170
SacI GAGCTC 2 cut(s) 104, 526
SaqAI TTAA 3 cut(s) 179, 459, 908
SatI GCNGC 4 cut(s) 126, 566, 760, 894
Sau3AI GATC 6 cut(s) 262, 340, 829, 931, 1462, 1501
Sau96I GGNCC 7 cut(s) 133, 169, 785, 974, 1175, 1425, 1695
SchI GAGTC 2 cut(s) 625, 1229
ScrFI CCNGG 8 cut(s) 147, 158, 346, 1003, 1225, 1456, 1575, 1699
SduI GDGCHC 3 cut(s) 104, 526, 656
SfaNI GCATC 2 cut(s) 785, 1249
SfuI TTCGAA 1 cut(s) 1104
SinI GGWCC 6 cut(s) 133, 169, 785, 974, 1425, 1695
SmiMI CAYNNNNRTG 5 cut(s) 659, 672, 767, 852, 1170
SmlI CTYRAG 2 cut(s) 430, 1607
SmoI CTYRAG 2 cut(s) 430, 1607
Sse9I AATT 7 cut(s) 992, 1106, 1153, 1184, 1411, 1420, 1495
SsiI CCGC 3 cut(s) 123, 126, 451
SspMI CTAG 2 cut(s) 782, 863
SstI GAGCTC 2 cut(s) 104, 526
StyD4I CCNGG 8 cut(s) 145, 156, 344, 1001, 1223, 1454, 1573, 1697
StyI CCWWGG 3 cut(s) 129, 420, 862
TaaI ACNGT 3 cut(s) 173, 532, 751
TaqI TCGA 7 cut(s) 153, 276, 573, 986, 1104, 1336, 1652
TasI AATT 7 cut(s) 992, 1106, 1153, 1184, 1411, 1420, 1495
TauI GCSGC 1 cut(s) 128
TfiI GAWTC 4 cut(s) 416, 439, 1082, 1290
Tru1I TTAA 3 cut(s) 179, 459, 908
Tru9I TTAA 3 cut(s) 179, 459, 908
TscAI CASTG 2 cut(s) 562, 1291
TseFI GTSAC 1 cut(s) 1545
TseI GCWGC 3 cut(s) 565, 759, 893
Tsp45I GTSAC 1 cut(s) 1545
TspDTI ATGAA 5 cut(s) 813, 884, 1074, 1282, 1283
TspRI CASTG 2 cut(s) 562, 1291
Tth111I GACNNNGTC 1 cut(s) 173
Van91I CCANNNNNTGG 2 cut(s) 249, 1092
VpaK11BI GGWCC 6 cut(s) 133, 169, 785, 974, 1425, 1695
XagI CCTNNNNNAGG 1 cut(s) 193
XapI RAATTY 2 cut(s) 992, 1153
XceI RCATGY 1 cut(s) 1386
XmaJI CCTAGG 1 cut(s) 862
XmnI GAANNNNTTC 1 cut(s) 1021
XspI CTAG 2 cut(s) 782, 863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.