Rh6AG511200

Cryptochrome DASH

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0016105
Physical Location & Seq
Forward (+)
68188370 .. 68192037
3668 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG511200.1

Sequence Viewer

Length: 1707 bp
ATGGCTGTTCTTCACTCCTCGCTCGCTCCATACTCTCTCAAAAAGCTCATTCTTATCCCACATCTGAAACCCAGAAAAATCTGTCATTTCCAAGCCATGAGCTCCAGCTCCAGACCGGAACCCGCTGTCTTAGTCCACAAGGTTCCGGGTCTGAACCCGGACGAAATGGACCGTGTCTCGGACCAAACCTTTCAGAGGTACACCTCCTCTTCCGTTAAGAGAAACGGCAATGGGGTCGCCATTGTTTGGTTTCGAAACGATCTGAGGGTTCTGGACAATGAGGCTCTCTATAAGGCTTGGCTTTCGTCCCGGGAGGTTTTGCCTGTCTATTGCATCGATCCCAGGCTTTTTGGCTCTACCTATTACTTTGGTTTTCCTAAAACTGGAGCGTTGAGAGCCCAATTTCTTGTTGAATCCTTGTTTGACTTGAAGAAGAATCTAACGAAGCGGGGTCTTAACTTGCTAATTCAATATGGGAAGCCTGAGGAGGTTCTGCCTTCTCTTGCAAAAACTTACGGAGCTCACACAGTATATGCCCAAAAAGAAACTTGCAGTGAGGAGCTGAGTGTGGAAAAATTGGTCAGCAAAGGTCTGCGGCGAGTGGTGTTACAGAGTCCTGCGAATAATCCCAATTTACAACTTATATGGGGCACCACTATGTACCACATAGAGGACCTCCCGTTTGATATCAGTTGTTTACCGGATGTCTATACTCAGTTTCGCAAGTCTGTTGAAGCGAAATGCACAGTTCGTGGCTGCATAAAAATGCCAGCATCTCTGGGGCCAGCACCCAGCATTGAGGACTGGGGATGTGTTCCTTCATTAGATCAGTTTGGACTTCAACATCAAAATGTAAGTTTAGGAATGAAGTTTGTTGGGGGTGAAAGTGCAGCATTGGGCAGAATAAATGAGTATTTCTGGAAGAAGGATCTGCTAAGTATATATAAAAAGACCAGAAATGGGATGTTAGGACCTGATTATTCAACAAAGTTTTCTCCTTGGCTTGCTTCAGGAAGCCTTTCTCCTCGTCTCGTACATGAAGAGGTAAAGAGGTATGAAAAAGAAAGGCAAGCAAATGATTCCACTTACTGGGTATTGTTTGAACTGATATGGAGGGATTACTTCAGGTTTCTATCAGTAAAATATGGGAATTCTCTTTTCCATCCAGGTGGCCCAAGAAAATTGGAGCATAGATGGAGCCAAGAAAAGACTTTATTTGAGACCTGGAGAGATGGACATACAGGGTACCCACTCATAGATGCGAACATGAAAGAGCTGTCAACCACTGGATTCATGTCAAATAGGGGAAGACAGATTGTATGTTCCTTTTTGGTTCGAGATATGGGTATTGACTGGCGCATGGGAGCTGAATGGTTTGAGACATGCCTTTTGGATTATGAGCCCTGTTCCAATTATGGTAATTGGACCTATGGAGCAGGAGTTGGAAATGACCCCAGGGAAGATCGTTACTTCAGCATTCCGAAACAAGCCCAGAATTATGATCCTGAAGGTGAGTATGTAGCTTACTGGCTTCCACAGCTACAATCACTTCCAAAAGATAAAAGGCACTTCCCTGGAATGGCATATATCAAGCAGGTTGTCCCTCTCAAGTTTGGTAATGCCGGTAAGTATCAAAACCACGACAAGACCTCGACTGCCAGAGGCACAAACTTTGGAGGAAGACAAGCAAAAGGGTCCAGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_photolyase FAD_binding_7

Protein Analysis

568

Amino Acids

64.93

Weight (kDa)

9.27

Isoelectric Point (pI)

40.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_photolyase PF00875 80 - 249 7.4e-36 DNA photolyase
FAD_binding_7 PF03441 366 - 528 4.5e-51 FAD binding domain of DNA photolyase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016105)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G24850
fragaria_vesca FvH4_2g30661
malus_domestica MD15G1110200.v1.1
prunus_persica Prupe.1G462400_v2.0.a1
pyrus_communis pycom15g10040
rosa_chinensis RchiOBHm_Chr6g0312231
rosa_laevigata RLG00000010340
rosa_multiflora Rmu_sc0010924.1_g000003
rosa_roxburghii Rroxscaffold_7G00156930
rosa_rugosa Rorug06G0394300
rosa_samantha Rh6AG511200 Rh6BG522200 Rh6CG528000 Rh6DG513400
rosa_wichuraiana Rw6G044460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1585
Acc65I GGTACC 1 cut(s) 1245
AccB1I GGYRCC 2 cut(s) 650, 1245
AccB7I CCANNNNNTGG 2 cut(s) 246, 1089
AciI CCGC 3 cut(s) 123, 448, 595
AclWI GGATC 3 cut(s) 332, 936, 1496
AcsI RAATTY 1 cut(s) 1150
AcuI CTGAAG 4 cut(s) 993, 1108, 1456, 1527
AfaI GTAC 4 cut(s) 200, 662, 1035, 1247
AfiI CCNNNNNNNGG 8 cut(s) 178, 195, 246, 383, 670, 960, 1089, 1579
AgsI TTSAA 7 cut(s) 413, 430, 470, 734, 842, 984, 1103
AjnI CCWGG 6 cut(s) 341, 1165, 1223, 1454, 1573, 1697
AluBI AGCT 9 cut(s) 46, 102, 108, 521, 562, 1276, 1367, 1523, 1540
AluI AGCT 9 cut(s) 46, 102, 108, 521, 562, 1276, 1367, 1523, 1540
Alw21I GWGCWC 2 cut(s) 104, 523
Alw26I GTCTC 4 cut(s) 181, 1034, 1214, 1373
AlwI GGATC 3 cut(s) 332, 936, 1496
Ama87I CYCGRG 1 cut(s) 309
AoxI GGCC 2 cut(s) 782, 1171
ApeKI GCWGC 2 cut(s) 756, 890
ApoI RAATTY 1 cut(s) 1150
ArsI GACNNNNNNTTYG 4 cut(s) 665, 697, 1372, 1404
Asp700I GAANNNNTTC 1 cut(s) 1018
Asp718I GGTACC 1 cut(s) 1245
AspLEI GCGC 1 cut(s) 1359
AspS9I GGNCC 8 cut(s) 169, 181, 673, 782, 971, 1172, 1425, 1695
AsuC2I CCSGG 4 cut(s) 147, 158, 310, 311
AsuHPI GGTGA 2 cut(s) 893, 1523
AsuII TTCGAA 1 cut(s) 253
AvaI CYCGRG 1 cut(s) 309
AvaII GGWCC 6 cut(s) 169, 181, 673, 971, 1425, 1695
AxyI CCTNAGG 1 cut(s) 483
BaeGI GKGCMC 1 cut(s) 653
BanI GGYRCC 2 cut(s) 650, 1245
BanII GRGCYC 4 cut(s) 104, 400, 523, 1404
BbsI GAAGAC 2 cut(s) 1315, 1687
Bbv12I GWGCWC 2 cut(s) 104, 523
BbvI GCAGC 2 cut(s) 743, 902
BccI CCATC 3 cut(s) 1170, 1188, 1226
BceAI ACGGC 1 cut(s) 241
BcgI CGANNNNNNTGC 2 cut(s) 217, 251
BciT130I CCWGG 6 cut(s) 343, 1167, 1225, 1456, 1575, 1699
BcnI CCSGG 4 cut(s) 147, 158, 310, 311
BcoDI GTCTC 4 cut(s) 181, 1034, 1214, 1373
BfuAI ACCTGC 1 cut(s) 1585
BisI GCNGC 3 cut(s) 596, 757, 891
BlsI GCNGC 3 cut(s) 597, 758, 892
Bme18I GGWCC 6 cut(s) 169, 181, 673, 971, 1425, 1695
BmeT110I CYCGRG 1 cut(s) 309
BmgT120I GGNCC 8 cut(s) 169, 181, 673, 782, 971, 1172, 1425, 1695
BmiI GGNNCC 7 cut(s) 120, 144, 652, 783, 1199, 1247, 1696
BmrI ACTGGG 2 cut(s) 814, 1099
BmsI GCATC 3 cut(s) 342, 782, 1249
BmuI ACTGGG 2 cut(s) 814, 1099
BpiI GAAGAC 2 cut(s) 1315, 1687
BpmI CTGGAG 4 cut(s) 88, 94, 405, 1246
Bpu14I TTCGAA 1 cut(s) 253
BpuEI CTTGAG 1 cut(s) 1592
BpuMI CCSGG 4 cut(s) 147, 158, 310, 311
Bsa29I ATCGAT 1 cut(s) 336
BsaI GGTCTC 1 cut(s) 1214
BsaJI CCNNGG 6 cut(s) 309, 341, 998, 1454, 1455, 1573
BsaWI WCCGGW 2 cut(s) 115, 700
BsaXI ACNNNNNCTCC 2 cut(s) 1425, 1455
Bsc4I CCNNNNNNNGG 8 cut(s) 178, 195, 246, 383, 670, 960, 1089, 1579
Bse118I RCCGGY 1 cut(s) 1622
Bse1I ACTGG 6 cut(s) 388, 809, 1094, 1291, 1358, 1532
Bse21I CCTNAGG 1 cut(s) 483
Bse3DI GCAATG 1 cut(s) 235
BseBI CCWGG 6 cut(s) 343, 1167, 1225, 1456, 1575, 1699
BseCI ATCGAT 1 cut(s) 336
BseDI CCNNGG 6 cut(s) 309, 341, 998, 1454, 1455, 1573
BseGI GGATG 4 cut(s) 709, 815, 969, 1162
BseLI CCNNNNNNNGG 8 cut(s) 178, 195, 246, 383, 670, 960, 1089, 1579
BseMI GCAATG 1 cut(s) 235
BseMII CTCAG 4 cut(s) 254, 474, 554, 728
BseNI ACTGG 6 cut(s) 388, 809, 1094, 1291, 1358, 1532
BseRI GAGGAG 5 cut(s) 7, 196, 500, 572, 1014
BseSI GKGCMC 1 cut(s) 653
BseXI GCAGC 2 cut(s) 743, 902
BseYI CCCAGC 1 cut(s) 791
BsgI GTGCAG 1 cut(s) 909
BshFI GGCC 2 cut(s) 784, 1173
BshNI GGYRCC 2 cut(s) 650, 1245
BshVI ATCGAT 1 cut(s) 336
BsiHKAI GWGCWC 2 cut(s) 104, 523
BsiHKCI CYCGRG 1 cut(s) 309
BsiSI CCGG 6 cut(s) 116, 146, 158, 310, 701, 1623
BslFI GGGAC 2 cut(s) 292, 1586
BslI CCNNNNNNNGG 8 cut(s) 178, 195, 246, 383, 670, 960, 1089, 1579
BsmAI GTCTC 4 cut(s) 181, 1034, 1214, 1373
BsmBI CGTCTC 1 cut(s) 1034
BsmFI GGGAC 2 cut(s) 292, 1586
BsmI GAATGC 1 cut(s) 1476
BsnI GGCC 2 cut(s) 784, 1173
Bso31I GGTCTC 1 cut(s) 1214
BsoBI CYCGRG 1 cut(s) 309
Bsp119I TTCGAA 1 cut(s) 253
Bsp1286I GDGCHC 5 cut(s) 104, 400, 523, 653, 1404
Bsp143I GATC 6 cut(s) 259, 337, 826, 928, 1462, 1501
BspACI CCGC 3 cut(s) 123, 448, 595
BspANI GGCC 2 cut(s) 784, 1173
BspCNI CTCAG 4 cut(s) 255, 475, 555, 727
BspDI ATCGAT 1 cut(s) 336
BspLI GGNNCC 7 cut(s) 120, 144, 652, 783, 1199, 1247, 1696
BspMI ACCTGC 1 cut(s) 1585
BspPI GGATC 3 cut(s) 332, 936, 1496
BspT104I TTCGAA 1 cut(s) 253
BspT107I GGYRCC 2 cut(s) 650, 1245
BspTNI GGTCTC 1 cut(s) 1214
BsrDI GCAATG 1 cut(s) 235
BsrFI RCCGGY 1 cut(s) 1622
BsrI ACTGG 6 cut(s) 388, 809, 1094, 1291, 1358, 1532
BssAI RCCGGY 1 cut(s) 1622
BssECI CCNNGG 6 cut(s) 309, 341, 998, 1454, 1455, 1573
BssMI GATC 6 cut(s) 259, 337, 826, 928, 1462, 1501
BssT1I CCWWGG 1 cut(s) 998
Bst2UI CCWGG 6 cut(s) 343, 1167, 1225, 1456, 1575, 1699
Bst4CI ACNGT 3 cut(s) 173, 529, 748
Bst6I CTCTTC 2 cut(s) 214, 1035
BstBI TTCGAA 1 cut(s) 253
BstC8I GCNNGC 5 cut(s) 24, 771, 786, 1005, 1071
BstDEI CTNAG 6 cut(s) 130, 263, 483, 563, 714, 935
BstENI CCTNNNNNAGG 1 cut(s) 193
BstF5I GGATG 4 cut(s) 709, 815, 969, 1162
BstHHI GCGC 1 cut(s) 1359
BstKTI GATC 6 cut(s) 262, 340, 829, 931, 1465, 1504
BstMAI GTCTC 4 cut(s) 181, 1034, 1214, 1373
BstMBI GATC 6 cut(s) 259, 337, 826, 928, 1462, 1501
BstMWI GCNNNNNNNGC 2 cut(s) 395, 1537
BstNI CCWGG 6 cut(s) 343, 1167, 1225, 1456, 1575, 1699
BstNSI RCATGY 1 cut(s) 1386
BstSLI GKGCMC 1 cut(s) 653
BstV1I GCAGC 2 cut(s) 743, 902
BstV2I GAAGAC 2 cut(s) 1315, 1687
BstX2I RGATCY 1 cut(s) 928
BstXI CCANNNNNNTGG 1 cut(s) 1169
BstYI RGATCY 1 cut(s) 928
Bsu15I ATCGAT 1 cut(s) 336
Bsu36I CCTNAGG 1 cut(s) 483
BsuRI GGCC 2 cut(s) 784, 1173
BsuTUI ATCGAT 1 cut(s) 336
BtsCI GGATG 4 cut(s) 709, 815, 969, 1162
BtsI GCAGTG 1 cut(s) 559
BtsIMutI CAGTG 2 cut(s) 559, 1284
BveI ACCTGC 1 cut(s) 1585
Cac8I GCNNGC 5 cut(s) 24, 771, 786, 1005, 1071
CfoI GCGC 1 cut(s) 1359
Cfr10I RCCGGY 1 cut(s) 1622
Cfr13I GGNCC 8 cut(s) 169, 181, 673, 782, 971, 1172, 1425, 1695
Cfr9I CCCGGG 1 cut(s) 309
ClaI ATCGAT 1 cut(s) 336
Csp6I GTAC 4 cut(s) 199, 661, 1034, 1246
CviAII CATG 6 cut(s) 97, 1037, 1267, 1294, 1360, 1383
CviQI GTAC 4 cut(s) 199, 661, 1034, 1246
DdeI CTNAG 6 cut(s) 130, 263, 483, 563, 714, 935
DpnI GATC 6 cut(s) 261, 339, 828, 930, 1464, 1503
DpnII GATC 6 cut(s) 259, 337, 826, 928, 1462, 1501
Eam1104I CTCTTC 2 cut(s) 214, 1035
EarI CTCTTC 2 cut(s) 214, 1035
Ecl136II GAGCTC 2 cut(s) 102, 521
Eco130I CCWWGG 1 cut(s) 998
Eco24I GRGCYC 4 cut(s) 104, 400, 523, 1404
Eco31I GGTCTC 1 cut(s) 1214
Eco32I GATATC 1 cut(s) 688
Eco47I GGWCC 6 cut(s) 169, 181, 673, 971, 1425, 1695
Eco53kI GAGCTC 2 cut(s) 102, 521
Eco57I CTGAAG 4 cut(s) 993, 1108, 1456, 1527
Eco81I CCTNAGG 1 cut(s) 483
Eco88I CYCGRG 1 cut(s) 309
EcoICRI GAGCTC 2 cut(s) 102, 521
EcoNI CCTNNNNNAGG 1 cut(s) 193
EcoO109I RGGNCCY 2 cut(s) 673, 971
EcoRI GAATTC 1 cut(s) 1150
EcoRII CCWGG 6 cut(s) 341, 1165, 1223, 1454, 1573, 1697
EcoRV GATATC 1 cut(s) 688
EcoT14I CCWWGG 1 cut(s) 998
EcoT38I GRGCYC 4 cut(s) 104, 400, 523, 1404
ErhI CCWWGG 1 cut(s) 998
Esp3I CGTCTC 1 cut(s) 1034
FaeI CATG 6 cut(s) 100, 1040, 1270, 1297, 1363, 1386
FaqI GGGAC 2 cut(s) 292, 1586
FatI CATG 6 cut(s) 96, 1036, 1266, 1293, 1359, 1382
FauI CCCGC 2 cut(s) 130, 441
Fnu4HI GCNGC 3 cut(s) 596, 757, 891
FokI GGATG 4 cut(s) 716, 822, 976, 1149
FriOI GRGCYC 4 cut(s) 104, 400, 523, 1404
Fsp4HI GCNGC 3 cut(s) 596, 757, 891
GlaI GCGC 1 cut(s) 1358
GluI GCNGC 3 cut(s) 596, 757, 891
GsaI CCCAGC 1 cut(s) 795
GsuI CTGGAG 4 cut(s) 88, 94, 405, 1246
HaeIII GGCC 2 cut(s) 784, 1173
HapII CCGG 6 cut(s) 116, 146, 158, 310, 701, 1623
HhaI GCGC 1 cut(s) 1359
Hin1II CATG 6 cut(s) 100, 1040, 1270, 1297, 1363, 1386
Hin6I GCGC 1 cut(s) 1357
HinP1I GCGC 1 cut(s) 1357
HincII GTYRAC 1 cut(s) 1281
HindII GTYRAC 1 cut(s) 1281
HinfI GANTC 5 cut(s) 413, 436, 613, 1079, 1290
HpaII CCGG 6 cut(s) 116, 146, 158, 310, 701, 1623
HphI GGTGA 2 cut(s) 893, 1523
Hpy166II GTNNAC 4 cut(s) 136, 201, 698, 1281
Hpy188I TCNGA 6 cut(s) 66, 153, 181, 195, 264, 1482
Hpy188III TCNNGA 6 cut(s) 111, 272, 919, 1011, 1337, 1505
Hpy8I GTNNAC 4 cut(s) 136, 201, 698, 1281
HpyAV CCTTC 4 cut(s) 507, 828, 919, 1502
HpyCH4III ACNGT 3 cut(s) 173, 529, 748
HpyCH4V TGCA 6 cut(s) 333, 506, 552, 744, 759, 890
HpyF10VI GCNNNNNNNGC 2 cut(s) 395, 1537
HpyF3I CTNAG 6 cut(s) 130, 263, 483, 563, 714, 935
Hsp92II CATG 6 cut(s) 100, 1040, 1270, 1297, 1363, 1386
HspAI GCGC 1 cut(s) 1357
KpnI GGTACC 1 cut(s) 1249
Kzo9I GATC 6 cut(s) 259, 337, 826, 928, 1462, 1501
Lsp1109I GCAGC 2 cut(s) 743, 902
LweI GCATC 3 cut(s) 342, 782, 1249
MaeIII GTNAC 2 cut(s) 606, 1466
MalI GATC 6 cut(s) 261, 339, 828, 930, 1464, 1503
MboI GATC 6 cut(s) 259, 337, 826, 928, 1462, 1501
MboII GAAGA 8 cut(s) 201, 442, 445, 934, 1052, 1320, 1472, 1692
MflI RGATCY 1 cut(s) 928
MhlI GDGCHC 5 cut(s) 104, 400, 523, 653, 1404
MluCI AATT 9 cut(s) 401, 465, 575, 631, 1150, 1181, 1411, 1420, 1495
MlyI GAGTC 1 cut(s) 622
MmeI TCCRAC 1 cut(s) 1423
MroXI GAANNNNTTC 1 cut(s) 1018
MseI TTAA 2 cut(s) 216, 456
MslI CAYNNNNRTG 4 cut(s) 656, 764, 849, 1167
MspA1I CMGCKG 1 cut(s) 125
MspI CCGG 6 cut(s) 116, 146, 158, 310, 701, 1623
Mva1269I GAATGC 1 cut(s) 1476
MvaI CCWGG 6 cut(s) 343, 1167, 1225, 1456, 1575, 1699
MwoI GCNNNNNNNGC 2 cut(s) 395, 1537
NciI CCSGG 4 cut(s) 147, 158, 310, 311
NdeII GATC 6 cut(s) 259, 337, 826, 928, 1462, 1501
NlaIII CATG 6 cut(s) 100, 1040, 1270, 1297, 1363, 1386
NlaIV GGNNCC 7 cut(s) 120, 144, 652, 783, 1199, 1247, 1696
NspI RCATGY 1 cut(s) 1386
NspV TTCGAA 1 cut(s) 253
PasI CCCWGGG 1 cut(s) 1455
PctI GAATGC 1 cut(s) 1476
PdmI GAANNNNTTC 1 cut(s) 1018
PfeI GAWTC 4 cut(s) 413, 436, 1079, 1290
PflFI GACNNNGTC 1 cut(s) 173
PflMI CCANNNNNTGG 2 cut(s) 246, 1089
PfoI TCCNGGA 1 cut(s) 1697
PkrI GCNGC 3 cut(s) 597, 758, 892
PleI GAGTC 1 cut(s) 621
PpsI GAGTC 1 cut(s) 621
PpuMI RGGWCCY 2 cut(s) 673, 971
Psp124BI GAGCTC 2 cut(s) 104, 523
Psp5II RGGWCCY 2 cut(s) 673, 971
Psp6I CCWGG 6 cut(s) 341, 1165, 1223, 1454, 1573, 1697
PspFI CCCAGC 1 cut(s) 791
PspGI CCWGG 6 cut(s) 341, 1165, 1223, 1454, 1573, 1697
PspN4I GGNNCC 7 cut(s) 120, 144, 652, 783, 1199, 1247, 1696
PspPI GGNCC 8 cut(s) 169, 181, 673, 782, 971, 1172, 1425, 1695
PspPPI RGGWCCY 2 cut(s) 673, 971
PsuI RGATCY 1 cut(s) 928
PsyI GACNNNGTC 1 cut(s) 173
RsaI GTAC 4 cut(s) 200, 662, 1035, 1247
RsaNI GTAC 4 cut(s) 199, 661, 1034, 1246
RseI CAYNNNNRTG 4 cut(s) 656, 764, 849, 1167
SacI GAGCTC 2 cut(s) 104, 523
SaqAI TTAA 2 cut(s) 216, 456
SatI GCNGC 3 cut(s) 596, 757, 891
Sau3AI GATC 6 cut(s) 259, 337, 826, 928, 1462, 1501
Sau96I GGNCC 8 cut(s) 169, 181, 673, 782, 971, 1172, 1425, 1695
SchI GAGTC 1 cut(s) 622
SduI GDGCHC 5 cut(s) 104, 400, 523, 653, 1404
SfaNI GCATC 3 cut(s) 342, 782, 1249
SfuI TTCGAA 1 cut(s) 253
SinI GGWCC 6 cut(s) 169, 181, 673, 971, 1425, 1695
SmaI CCCGGG 1 cut(s) 311
SmiMI CAYNNNNRTG 4 cut(s) 656, 764, 849, 1167
SmlI CTYRAG 1 cut(s) 1607
SmoI CTYRAG 1 cut(s) 1607
Sse9I AATT 9 cut(s) 401, 465, 575, 631, 1150, 1181, 1411, 1420, 1495
SsiI CCGC 3 cut(s) 123, 448, 595
SstI GAGCTC 2 cut(s) 104, 523
StyI CCWWGG 1 cut(s) 998
TaaI ACNGT 3 cut(s) 173, 529, 748
TaqI TCGA 4 cut(s) 253, 336, 1336, 1652
TasI AATT 9 cut(s) 401, 465, 575, 631, 1150, 1181, 1411, 1420, 1495
TauI GCSGC 1 cut(s) 598
TfiI GAWTC 4 cut(s) 413, 436, 1079, 1290
Tru1I TTAA 2 cut(s) 216, 456
Tru9I TTAA 2 cut(s) 216, 456
TscAI CASTG 2 cut(s) 559, 1291
TseI GCWGC 2 cut(s) 756, 890
TspDTI ATGAA 6 cut(s) 810, 881, 1053, 1071, 1282, 1283
TspGWI ACGGA 2 cut(s) 202, 531
TspMI CCCGGG 1 cut(s) 309
TspRI CASTG 2 cut(s) 559, 1291
Tth111I GACNNNGTC 1 cut(s) 173
Van91I CCANNNNNTGG 2 cut(s) 246, 1089
VpaK11BI GGWCC 6 cut(s) 169, 181, 673, 971, 1425, 1695
XagI CCTNNNNNAGG 1 cut(s) 193
XapI RAATTY 1 cut(s) 1150
XceI RCATGY 1 cut(s) 1386
XmaI CCCGGG 1 cut(s) 309
XmnI GAANNNNTTC 1 cut(s) 1018
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.