Rroxscaffold_7G00156930

Cryptochrome DASH

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0016105
Physical Location & Seq
Reverse (-)
819019 .. 823020
4002 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00156930.1

Sequence Viewer

Length: 1611 bp
ATGAGCTCCAGCTCCAGACCCGAACCCGCTGCCTTAGTCCACAAGGTTCCGGGTCTGGACCCGGACGAAATGGACCGTGTCTCGGACCAAACCTTTCAGAGGTACACCTCCTCTTCTGTTAAGAGAAACGGCAATGGGGTCGCCATTGTTTGGTTTCGAAACGATCTGAGGGTTCTGGACAATGAGGCTCTCTATAAGGCTTGGCTTTCGTCCCGGGAGGTTTTGCCTGTCTATTGCATGGATCCCAGGCTTTTTGGCTCTACCTATTACTTTGGTTTTCCTAAAACTGGAGCATTGAGAGCCCAATTTCTTGTTGAATCCTTGGTTGACTTGAAGAAGAATCTAACGAAGCGGGGTCTTAACTTGCTAATTCAATATGGGAAGCCTGAGGAGGTTCTGCCTTCTCTTGCAAAAACTTACGGAGCTCACACAGTATATGCCCAAAAAGAAACTTGCAGTGAGGAGCTGTGTGTGGAAAAATTGGTCAGCAAAGGTCTGCGGCGAGTGGTGTTACAGAGTCCCGCGAATAATCCCAATTTACAACTTATATGGGGCACCACTATGTACCACATAGATGACCTCCCGTTTGATACCAGTTGTTTACCGGATGTCTATACTCAGTTTCGCAAGTCTGTTGAAGCGAAATGCACAGTTCGTTGCTGCATTAGAATGCCAGCATCTCTGGGGCCAGCACCCAGCATTGAGGACTGGGGATGTGTTCCTTCATTAGATCAGTTTGGACTTCAACATCAAAATGTAAGTTTAGGAATGAAGTTTGTTGGGGGTGAAAGTGCAGCATTGGGCAGAATAAATGAGTATTTCTGGAAGAAGGATCTGCTAAGTACATATAAAAAGACCAGAAATGGTATGTTAGGACCTGATTATTCAACCAAGTTTTCTCCTTGGCTTGCTTCAGGAAGCCTTTCTCCTCGTCTTGTACACGAAGAGGTAAAGAGGTATGAAAAAGAAAGGCAAGCAAATGATTCCACATACTGGGTATTGTTTGAACTGATATGGAGGGATTACTTCAGGTTTCTATCAGTAAAATATGGGAATTCACTTTTCCATCCAGGTGGCCCAAGAAAATTGGAGCATAGATGGAGCCAAGAAAAGACTTTATTTGAGACCTGGAGAGATGGCCATACAGGGTACCCACTCATAGATGCGAACATGAAAGAGCTGTCAACCACTGGATTCATGTCAAATCGGGGAAGACAGATTGTATGTTCCTTTCTGGTTCGAGATATGGGTATTGACTGGCGCATGGGAGCTGAATGGTTTGAGACATGCCTTTTGGATTATGACCCTTGTTCCAATTATGGTAATTGGACCTATGGAGCAGGAGTTGGAAATGACCCCAGGGAAGATCGTTACTTCAGCATTCCGAAACAAGCCCAGAATTATGATCCTGAAGGTGAGTATGTAGCGTACTGGCTTCCACAGCTACAGTCACTTCCAAAAGATAAAAGGCACTTCCCTGGAATGGCATATATCAAGCAGGTTGTCCCTCTCAAGTTTGGTAATGCTGGTAAGTATCAAAACCACGACAAGGCCTCGACTGCCAGAGGCAAAAACTTTGGAGGAAGACAGGCAAAAGGGTCCAGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_photolyase FAD_binding_7

Protein Analysis

536

Amino Acids

61.27

Weight (kDa)

9.05

Isoelectric Point (pI)

39.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_photolyase PF00875 48 - 217 9.9e-37 DNA photolyase
FAD_binding_7 PF03441 334 - 496 1.4e-51 FAD binding domain of DNA photolyase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016105)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G24850
fragaria_vesca FvH4_2g30661
malus_domestica MD15G1110200.v1.1
prunus_persica Prupe.1G462400_v2.0.a1
pyrus_communis pycom15g10040
rosa_chinensis RchiOBHm_Chr6g0312231
rosa_laevigata RLG00000010340
rosa_multiflora Rmu_sc0010924.1_g000003
rosa_roxburghii Rroxscaffold_7G00156930
rosa_rugosa Rorug06G0394300
rosa_samantha Rh6AG511200 Rh6BG522200 Rh6CG528000 Rh6DG513400
rosa_wichuraiana Rw6G044460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1489
Acc65I GGTACC 1 cut(s) 1149
AccB1I GGYRCC 2 cut(s) 554, 1149
AccB7I CCANNNNNTGG 2 cut(s) 150, 993
AccII CGCG 1 cut(s) 524
AciI CCGC 4 cut(s) 27, 352, 499, 522
AclWI GGATC 4 cut(s) 236, 249, 840, 1400
AcoI YGGCCR 1 cut(s) 1138
AcsI RAATTY 1 cut(s) 1054
AcuI CTGAAG 4 cut(s) 897, 1012, 1360, 1431
AfaI GTAC 6 cut(s) 104, 566, 844, 939, 1151, 1430
AfiI CCNNNNNNNGG 7 cut(s) 82, 99, 150, 287, 993, 1483, 1549
AgsI TTSAA 7 cut(s) 317, 334, 374, 638, 746, 888, 1007
AjnI CCWGG 6 cut(s) 245, 1069, 1127, 1358, 1477, 1601
AluBI AGCT 7 cut(s) 6, 12, 425, 466, 1180, 1271, 1444
AluI AGCT 7 cut(s) 6, 12, 425, 466, 1180, 1271, 1444
Alw21I GWGCWC 2 cut(s) 8, 427
Alw26I GTCTC 3 cut(s) 85, 1118, 1277
AlwI GGATC 4 cut(s) 236, 249, 840, 1400
Ama87I CYCGRG 1 cut(s) 213
AoxI GGCC 4 cut(s) 686, 1075, 1138, 1551
ApeKI GCWGC 3 cut(s) 29, 660, 794
ApoI RAATTY 1 cut(s) 1054
ArsI GACNNNNNNTTYG 4 cut(s) 569, 601, 1276, 1308
Asp700I GAANNNNTTC 1 cut(s) 922
Asp718I GGTACC 1 cut(s) 1149
AspLEI GCGC 1 cut(s) 1263
AspS9I GGNCC 8 cut(s) 58, 73, 85, 686, 875, 1076, 1329, 1599
AsuC2I CCSGG 4 cut(s) 51, 62, 214, 215
AsuHPI GGTGA 2 cut(s) 797, 1427
AsuII TTCGAA 1 cut(s) 157
AvaI CYCGRG 1 cut(s) 213
AvaII GGWCC 6 cut(s) 58, 73, 85, 875, 1329, 1599
AxyI CCTNAGG 1 cut(s) 387
BaeGI GKGCMC 1 cut(s) 557
BalI TGGCCA 1 cut(s) 1140
BamHI GGATCC 1 cut(s) 241
BanI GGYRCC 2 cut(s) 554, 1149
BanII GRGCYC 3 cut(s) 8, 304, 427
BbsI GAAGAC 2 cut(s) 1219, 1591
Bbv12I GWGCWC 2 cut(s) 8, 427
BbvI GCAGC 3 cut(s) 16, 647, 806
BccI CCATC 3 cut(s) 1074, 1092, 1130
BceAI ACGGC 1 cut(s) 145
BcgI CGANNNNNNTGC 4 cut(s) 11, 45, 121, 155
BciT130I CCWGG 6 cut(s) 247, 1071, 1129, 1360, 1479, 1603
BcnI CCSGG 4 cut(s) 51, 62, 214, 215
BcoDI GTCTC 3 cut(s) 85, 1118, 1277
BfmI CTRYAG 1 cut(s) 1445
BfuAI ACCTGC 1 cut(s) 1489
BisI GCNGC 4 cut(s) 30, 500, 661, 795
BlsI GCNGC 4 cut(s) 31, 501, 662, 796
Bme18I GGWCC 6 cut(s) 58, 73, 85, 875, 1329, 1599
BmeT110I CYCGRG 1 cut(s) 213
BmgT120I GGNCC 8 cut(s) 58, 73, 85, 686, 875, 1076, 1329, 1599
BmiI GGNNCC 8 cut(s) 48, 60, 243, 556, 687, 1103, 1151, 1600
BmrI ACTGGG 2 cut(s) 718, 1003
BmsI GCATC 2 cut(s) 686, 1153
BmuI ACTGGG 2 cut(s) 718, 1003
BpiI GAAGAC 2 cut(s) 1219, 1591
BpmI CTGGAG 2 cut(s) 309, 1150
Bpu14I TTCGAA 1 cut(s) 157
BpuEI CTTGAG 1 cut(s) 1496
BpuMI CCSGG 4 cut(s) 51, 62, 214, 215
BsaI GGTCTC 1 cut(s) 1118
BsaJI CCNNGG 7 cut(s) 213, 245, 321, 902, 1358, 1359, 1477
BsaWI WCCGGW 1 cut(s) 604
BsaXI ACNNNNNCTCC 2 cut(s) 1329, 1359
Bsc4I CCNNNNNNNGG 7 cut(s) 82, 99, 150, 287, 993, 1483, 1549
Bse1I ACTGG 7 cut(s) 292, 594, 713, 998, 1195, 1262, 1436
Bse21I CCTNAGG 1 cut(s) 387
Bse3DI GCAATG 1 cut(s) 139
BseBI CCWGG 6 cut(s) 247, 1071, 1129, 1360, 1479, 1603
BseDI CCNNGG 7 cut(s) 213, 245, 321, 902, 1358, 1359, 1477
BseGI GGATG 3 cut(s) 613, 719, 1066
BseLI CCNNNNNNNGG 7 cut(s) 82, 99, 150, 287, 993, 1483, 1549
BseMI GCAATG 1 cut(s) 139
BseMII CTCAG 3 cut(s) 158, 378, 632
BseNI ACTGG 7 cut(s) 292, 594, 713, 998, 1195, 1262, 1436
BseRI GAGGAG 4 cut(s) 100, 404, 476, 918
BseSI GKGCMC 1 cut(s) 557
BseXI GCAGC 3 cut(s) 16, 647, 806
BseYI CCCAGC 1 cut(s) 695
BsgI GTGCAG 1 cut(s) 813
Bsh1236I CGCG 1 cut(s) 524
BshFI GGCC 4 cut(s) 688, 1077, 1140, 1553
BshNI GGYRCC 2 cut(s) 554, 1149
BsiHKAI GWGCWC 2 cut(s) 8, 427
BsiHKCI CYCGRG 1 cut(s) 213
BsiSI CCGG 4 cut(s) 50, 62, 214, 605
BslFI GGGAC 3 cut(s) 196, 504, 1490
BslI CCNNNNNNNGG 7 cut(s) 82, 99, 150, 287, 993, 1483, 1549
BsmAI GTCTC 3 cut(s) 85, 1118, 1277
BsmFI GGGAC 3 cut(s) 196, 504, 1490
BsmI GAATGC 2 cut(s) 675, 1380
BsnI GGCC 4 cut(s) 688, 1077, 1140, 1553
Bso31I GGTCTC 1 cut(s) 1118
BsoBI CYCGRG 1 cut(s) 213
Bsp119I TTCGAA 1 cut(s) 157
Bsp1286I GDGCHC 4 cut(s) 8, 304, 427, 557
Bsp1407I TGTACA 1 cut(s) 937
Bsp143I GATC 6 cut(s) 163, 241, 730, 832, 1366, 1405
BspACI CCGC 4 cut(s) 27, 352, 499, 522
BspANI GGCC 4 cut(s) 688, 1077, 1140, 1553
BspCNI CTCAG 3 cut(s) 159, 379, 631
BspFNI CGCG 1 cut(s) 524
BspLI GGNNCC 8 cut(s) 48, 60, 243, 556, 687, 1103, 1151, 1600
BspMI ACCTGC 1 cut(s) 1489
BspPI GGATC 4 cut(s) 236, 249, 840, 1400
BspT104I TTCGAA 1 cut(s) 157
BspT107I GGYRCC 2 cut(s) 554, 1149
BspTNI GGTCTC 1 cut(s) 1118
BsrDI GCAATG 1 cut(s) 139
BsrGI TGTACA 1 cut(s) 937
BsrI ACTGG 7 cut(s) 292, 594, 713, 998, 1195, 1262, 1436
BssECI CCNNGG 7 cut(s) 213, 245, 321, 902, 1358, 1359, 1477
BssMI GATC 6 cut(s) 163, 241, 730, 832, 1366, 1405
BssT1I CCWWGG 2 cut(s) 321, 902
Bst2UI CCWGG 6 cut(s) 247, 1071, 1129, 1360, 1479, 1603
Bst4CI ACNGT 4 cut(s) 77, 433, 652, 1449
Bst6I CTCTTC 2 cut(s) 118, 939
BstAUI TGTACA 1 cut(s) 937
BstBI TTCGAA 1 cut(s) 157
BstC8I GCNNGC 4 cut(s) 675, 690, 909, 975
BstDEI CTNAG 5 cut(s) 34, 167, 387, 618, 839
BstENI CCTNNNNNAGG 1 cut(s) 97
BstF5I GGATG 3 cut(s) 613, 719, 1066
BstFNI CGCG 1 cut(s) 524
BstHHI GCGC 1 cut(s) 1263
BstKTI GATC 6 cut(s) 166, 244, 733, 835, 1369, 1408
BstMAI GTCTC 3 cut(s) 85, 1118, 1277
BstMBI GATC 6 cut(s) 163, 241, 730, 832, 1366, 1405
BstMWI GCNNNNNNNGC 3 cut(s) 299, 1441, 1559
BstNI CCWGG 6 cut(s) 247, 1071, 1129, 1360, 1479, 1603
BstNSI RCATGY 1 cut(s) 1290
BstSFI CTRYAG 1 cut(s) 1445
BstSLI GKGCMC 1 cut(s) 557
BstUI CGCG 1 cut(s) 524
BstV1I GCAGC 3 cut(s) 16, 647, 806
BstV2I GAAGAC 2 cut(s) 1219, 1591
BstX2I RGATCY 2 cut(s) 241, 832
BstXI CCANNNNNNTGG 1 cut(s) 1073
BstYI RGATCY 2 cut(s) 241, 832
Bsu36I CCTNAGG 1 cut(s) 387
BsuRI GGCC 4 cut(s) 688, 1077, 1140, 1553
BtsCI GGATG 3 cut(s) 613, 719, 1066
BtsI GCAGTG 1 cut(s) 463
BtsIMutI CAGTG 2 cut(s) 463, 1188
BveI ACCTGC 1 cut(s) 1489
Cac8I GCNNGC 4 cut(s) 675, 690, 909, 975
CfoI GCGC 1 cut(s) 1263
Cfr13I GGNCC 8 cut(s) 58, 73, 85, 686, 875, 1076, 1329, 1599
Cfr9I CCCGGG 1 cut(s) 213
Csp6I GTAC 6 cut(s) 103, 565, 843, 938, 1150, 1429
CviAII CATG 5 cut(s) 238, 1171, 1198, 1264, 1287
CviQI GTAC 6 cut(s) 103, 565, 843, 938, 1150, 1429
DdeI CTNAG 5 cut(s) 34, 167, 387, 618, 839
DpnI GATC 6 cut(s) 165, 243, 732, 834, 1368, 1407
DpnII GATC 6 cut(s) 163, 241, 730, 832, 1366, 1405
EaeI YGGCCR 1 cut(s) 1138
Eam1104I CTCTTC 2 cut(s) 118, 939
EarI CTCTTC 2 cut(s) 118, 939
Ecl136II GAGCTC 2 cut(s) 6, 425
Eco130I CCWWGG 2 cut(s) 321, 902
Eco147I AGGCCT 1 cut(s) 1553
Eco24I GRGCYC 3 cut(s) 8, 304, 427
Eco31I GGTCTC 1 cut(s) 1118
Eco47I GGWCC 6 cut(s) 58, 73, 85, 875, 1329, 1599
Eco53kI GAGCTC 2 cut(s) 6, 425
Eco57I CTGAAG 4 cut(s) 897, 1012, 1360, 1431
Eco81I CCTNAGG 1 cut(s) 387
Eco88I CYCGRG 1 cut(s) 213
EcoICRI GAGCTC 2 cut(s) 6, 425
EcoNI CCTNNNNNAGG 1 cut(s) 97
EcoO109I RGGNCCY 1 cut(s) 875
EcoRI GAATTC 1 cut(s) 1054
EcoRII CCWGG 6 cut(s) 245, 1069, 1127, 1358, 1477, 1601
EcoT14I CCWWGG 2 cut(s) 321, 902
EcoT38I GRGCYC 3 cut(s) 8, 304, 427
ErhI CCWWGG 2 cut(s) 321, 902
FaeI CATG 5 cut(s) 241, 1174, 1201, 1267, 1290
FaqI GGGAC 3 cut(s) 196, 504, 1490
FatI CATG 5 cut(s) 237, 1170, 1197, 1263, 1286
FauI CCCGC 3 cut(s) 34, 345, 529
Fnu4HI GCNGC 4 cut(s) 30, 500, 661, 795
FokI GGATG 3 cut(s) 620, 726, 1053
FriOI GRGCYC 3 cut(s) 8, 304, 427
Fsp4HI GCNGC 4 cut(s) 30, 500, 661, 795
GlaI GCGC 1 cut(s) 1262
GluI GCNGC 4 cut(s) 30, 500, 661, 795
GsaI CCCAGC 1 cut(s) 699
GsuI CTGGAG 2 cut(s) 309, 1150
HaeIII GGCC 4 cut(s) 688, 1077, 1140, 1553
HapII CCGG 4 cut(s) 50, 62, 214, 605
HhaI GCGC 1 cut(s) 1263
Hin1II CATG 5 cut(s) 241, 1174, 1201, 1267, 1290
Hin6I GCGC 1 cut(s) 1261
HinP1I GCGC 1 cut(s) 1261
HincII GTYRAC 2 cut(s) 328, 1185
HindII GTYRAC 2 cut(s) 328, 1185
HinfI GANTC 5 cut(s) 317, 340, 517, 983, 1194
HpaII CCGG 4 cut(s) 50, 62, 214, 605
HphI GGTGA 2 cut(s) 797, 1427
Hpy166II GTNNAC 6 cut(s) 40, 105, 328, 602, 940, 1185
Hpy188I TCNGA 4 cut(s) 85, 99, 168, 1386
Hpy188III TCNNGA 7 cut(s) 15, 56, 176, 823, 915, 1241, 1409
Hpy8I GTNNAC 6 cut(s) 40, 105, 328, 602, 940, 1185
HpyAV CCTTC 4 cut(s) 411, 732, 823, 1406
HpyCH4III ACNGT 4 cut(s) 77, 433, 652, 1449
HpyCH4V TGCA 6 cut(s) 237, 410, 456, 648, 663, 794
HpyF10VI GCNNNNNNNGC 3 cut(s) 299, 1441, 1559
HpyF3I CTNAG 5 cut(s) 34, 167, 387, 618, 839
Hsp92II CATG 5 cut(s) 241, 1174, 1201, 1267, 1290
HspAI GCGC 1 cut(s) 1261
KpnI GGTACC 1 cut(s) 1153
Kzo9I GATC 6 cut(s) 163, 241, 730, 832, 1366, 1405
LmnI GCTCC 9 cut(s) 11, 17, 290, 422, 463, 1090, 1101, 1268, 1337
Lsp1109I GCAGC 3 cut(s) 16, 647, 806
LweI GCATC 2 cut(s) 686, 1153
MaeIII GTNAC 3 cut(s) 510, 1370, 1449
MalI GATC 6 cut(s) 165, 243, 732, 834, 1368, 1407
MboI GATC 6 cut(s) 163, 241, 730, 832, 1366, 1405
MboII GAAGA 8 cut(s) 105, 346, 349, 838, 956, 1224, 1376, 1596
MflI RGATCY 2 cut(s) 241, 832
MhlI GDGCHC 4 cut(s) 8, 304, 427, 557
MlsI TGGCCA 1 cut(s) 1140
MluCI AATT 9 cut(s) 305, 369, 479, 535, 1054, 1085, 1315, 1324, 1399
MluNI TGGCCA 1 cut(s) 1140
MlyI GAGTC 1 cut(s) 526
MmeI TCCRAC 1 cut(s) 1327
Mox20I TGGCCA 1 cut(s) 1140
MroXI GAANNNNTTC 1 cut(s) 922
MscI TGGCCA 1 cut(s) 1140
MseI TTAA 2 cut(s) 120, 360
MslI CAYNNNNRTG 5 cut(s) 560, 573, 668, 753, 1071
Msp20I TGGCCA 1 cut(s) 1140
MspA1I CMGCKG 1 cut(s) 29
MspI CCGG 4 cut(s) 50, 62, 214, 605
Mva1269I GAATGC 2 cut(s) 675, 1380
MvaI CCWGG 6 cut(s) 247, 1071, 1129, 1360, 1479, 1603
MvnI CGCG 1 cut(s) 524
MwoI GCNNNNNNNGC 3 cut(s) 299, 1441, 1559
NciI CCSGG 4 cut(s) 51, 62, 214, 215
NdeII GATC 6 cut(s) 163, 241, 730, 832, 1366, 1405
NlaIII CATG 5 cut(s) 241, 1174, 1201, 1267, 1290
NlaIV GGNNCC 8 cut(s) 48, 60, 243, 556, 687, 1103, 1151, 1600
NmuCI GTSAC 1 cut(s) 1449
NspI RCATGY 1 cut(s) 1290
NspV TTCGAA 1 cut(s) 157
PasI CCCWGGG 1 cut(s) 1359
PceI AGGCCT 1 cut(s) 1553
PctI GAATGC 2 cut(s) 675, 1380
PdmI GAANNNNTTC 1 cut(s) 922
PfeI GAWTC 4 cut(s) 317, 340, 983, 1194
PflFI GACNNNGTC 1 cut(s) 77
PflMI CCANNNNNTGG 2 cut(s) 150, 993
PfoI TCCNGGA 1 cut(s) 1601
PkrI GCNGC 4 cut(s) 31, 501, 662, 796
PleI GAGTC 1 cut(s) 525
PpsI GAGTC 1 cut(s) 525
PpuMI RGGWCCY 1 cut(s) 875
Psp124BI GAGCTC 2 cut(s) 8, 427
Psp5II RGGWCCY 1 cut(s) 875
Psp6I CCWGG 6 cut(s) 245, 1069, 1127, 1358, 1477, 1601
PspFI CCCAGC 1 cut(s) 695
PspGI CCWGG 6 cut(s) 245, 1069, 1127, 1358, 1477, 1601
PspN4I GGNNCC 8 cut(s) 48, 60, 243, 556, 687, 1103, 1151, 1600
PspPI GGNCC 8 cut(s) 58, 73, 85, 686, 875, 1076, 1329, 1599
PspPPI RGGWCCY 1 cut(s) 875
PsuI RGATCY 2 cut(s) 241, 832
PsyI GACNNNGTC 1 cut(s) 77
RsaI GTAC 6 cut(s) 104, 566, 844, 939, 1151, 1430
RsaNI GTAC 6 cut(s) 103, 565, 843, 938, 1150, 1429
RseI CAYNNNNRTG 5 cut(s) 560, 573, 668, 753, 1071
SacI GAGCTC 2 cut(s) 8, 427
SaqAI TTAA 2 cut(s) 120, 360
SatI GCNGC 4 cut(s) 30, 500, 661, 795
Sau3AI GATC 6 cut(s) 163, 241, 730, 832, 1366, 1405
Sau96I GGNCC 8 cut(s) 58, 73, 85, 686, 875, 1076, 1329, 1599
SchI GAGTC 1 cut(s) 526
SduI GDGCHC 4 cut(s) 8, 304, 427, 557
SfaNI GCATC 2 cut(s) 686, 1153
SfcI CTRYAG 1 cut(s) 1445
SfuI TTCGAA 1 cut(s) 157
SinI GGWCC 6 cut(s) 58, 73, 85, 875, 1329, 1599
SmaI CCCGGG 1 cut(s) 215
SmiMI CAYNNNNRTG 5 cut(s) 560, 573, 668, 753, 1071
SmlI CTYRAG 1 cut(s) 1511
SmoI CTYRAG 1 cut(s) 1511
Sse9I AATT 9 cut(s) 305, 369, 479, 535, 1054, 1085, 1315, 1324, 1399
SseBI AGGCCT 1 cut(s) 1553
SsiI CCGC 4 cut(s) 27, 352, 499, 522
SstI GAGCTC 2 cut(s) 8, 427
StuI AGGCCT 1 cut(s) 1553
StyI CCWWGG 2 cut(s) 321, 902
TaaI ACNGT 4 cut(s) 77, 433, 652, 1449
TaqI TCGA 3 cut(s) 157, 1240, 1556
TasI AATT 9 cut(s) 305, 369, 479, 535, 1054, 1085, 1315, 1324, 1399
TatI WGTACW 2 cut(s) 842, 937
TauI GCSGC 1 cut(s) 502
TfiI GAWTC 4 cut(s) 317, 340, 983, 1194
Tru1I TTAA 2 cut(s) 120, 360
Tru9I TTAA 2 cut(s) 120, 360
TscAI CASTG 2 cut(s) 463, 1195
TseFI GTSAC 1 cut(s) 1449
TseI GCWGC 3 cut(s) 29, 660, 794
Tsp45I GTSAC 1 cut(s) 1449
TspDTI ATGAA 5 cut(s) 714, 785, 975, 1186, 1187
TspGWI ACGGA 1 cut(s) 435
TspMI CCCGGG 1 cut(s) 213
TspRI CASTG 2 cut(s) 463, 1195
Tth111I GACNNNGTC 1 cut(s) 77
Van91I CCANNNNNTGG 2 cut(s) 150, 993
VpaK11BI GGWCC 6 cut(s) 58, 73, 85, 875, 1329, 1599
XagI CCTNNNNNAGG 1 cut(s) 97
XapI RAATTY 1 cut(s) 1054
XceI RCATGY 1 cut(s) 1290
XmaI CCCGGG 1 cut(s) 213
XmnI GAANNNNTTC 1 cut(s) 922
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.