MD15G1110200.v1.1

Cryptochrome DASH

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0016105
Physical Location & Seq
Forward (+)
7702158 .. 7706059
3902 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1110200.v1.1.491

Sequence Viewer

Length: 1767 bp
ATGGCATATCCTCACCCCTGGCTCGCACCCCACTGTCTGAAAAAGTTCATCATTCGCCCATTTTTCCCAAATCCAAAACCCACGATTTCAACCGAAAGACTCAATCTTTTCCGACCCATGAGTTCCTCCTCCAGCTCCAAACCCGAATCGCCCGCCGCGGTCTCCCAGGTTCCGGGTCTGGACCCGGTGGAAATGGAGCGAGTTGCGGACCAAACGCTGCAGAGGTACTCGGCCTCCTCCTCTGCCAAGAGAAACGGCAGAGGTGTGGCCGTCGTTTGGTTCAGGAACGACCTCAGATTGCTGGACAATGAGGCTCTTTACAAAGCTTGGGTTTCGTCCCAGGAGGTTCTGGCTGTCTATTGTGTTGATCCTAGGATTTTTGGTTCTACCCATTACTTTGGTTTTCCCAAAACTGGAGCGTTGCGAGCACAATTTCTGATCGAGTGTTTGGCTGACTTGAAGAAGAATCTGATGAAGCGAGGTCTTAACTTGCTAATTCAACATGGGAAGCCCGAGGAGATTCTCCCTGATCTTGCAAAAGCTTTTGGAGCTCACACAGTATATGCCCAAAAAGAAACTTGCAGTGAGGAGTTAAATGTCGAAAGATTGGTCAGCAAAGGTTTGCAACGAGTGGCGTTGCCATCATCTTCAGTGCAATCCTCTAAGCCCGGTTCTGTAAACAATCCTAAGTTACAACTTATTTGGGGCACCACTATGTACCATATAGACGACCTCCCGTTTGATACCAGCAGCCTACCGGACGTGTATACTCAATTTCGCAAGTCTGTTGAAGCCAAATGCACAGTTCGTGGCTGCATCAAAATTCCAGCTTCTCTTGGTCCACCCCCTAGTGTTGAAGACTGGGGATGTGTTCCTTCATTAGATCAGTTTGGACTTCAATCCTCAATTGTAAGTAAAGGAATGAAGTTTGTCGGGGGCGAAAGTGCCGCATTGGGCAGAGTGCACGAGTATTTCTGGAAGAAGGATTTGGTAAAGATATATAAACACACCAGAAACGGAATGTTAGGACCTGATTATTCAACAAAATTTTCTCCATGGCTTGCTTCCGGAAGCCTTTCTCCCCGTTTCATATATGAAGAGGTGAAGAGGTATGAAAAAGAAAGGGAAGCAAATGATTCCACATACTGGGTATTGTTTGAACTGATATGGAGGGATTACTTCAGGTTTCTATCAGCAAAATGCGGGAATTCCCTTTTCCATTTGGGTGGCCCAAGAAAGGTGGAGCATAGATGGAGCCAGGAAAAGACTTTATTTGAATCCTGGAGAGATGGTCATACGGGGTATCCACTTATAGACGCTAATATGAAGGAGCTGTCGACCACTGGATTCATGTCAAATCGAGGAAGGCAGATTGTATGTTCCTTTCTAGTTCGTGATATGGGCATTGACTGGCGCATGGGAGCTGAATGGTTCGAGACATGTCTTTTGGATTATGACCCTTGTTCCAATTATGGGAATTGGACCTATGGAGCAGGTGTTGGAAATGACCCCAGAGAAGATCGTTACTTCAGTATTCCGAAACAAGCGCAGAATTATGATCCTGATGGCGAGTATGTGGCATATTGGCTTCCGCAATTACGATCGCTTCCTAAAGATAGACGGAACTTTCCCGGAATGGCATATATCAAGCCGGTTGTACCTCTCAAGTTTGGAAATGCCAGTAGTAGGCACCAGAACCAGGACAGGGGCTCGGCTGCTGGAGGCGCAAATTTTGGAGGAAGACAGCCACGGGGGCAAAGGAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_photolyase FAD_binding_7

Protein Analysis

589

Amino Acids

66.61

Weight (kDa)

9.24

Isoelectric Point (pI)

41.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_photolyase PF00875 90 - 268 2.8e-36 DNA photolyase
FAD_binding_7 PF03441 385 - 541 5.9e-50 FAD binding domain of DNA photolyase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016105)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G24850
fragaria_vesca FvH4_2g30661
malus_domestica MD15G1110200.v1.1
prunus_persica Prupe.1G462400_v2.0.a1
pyrus_communis pycom15g10040
rosa_chinensis RchiOBHm_Chr6g0312231
rosa_laevigata RLG00000010340
rosa_multiflora Rmu_sc0010924.1_g000003
rosa_roxburghii Rroxscaffold_7G00156930
rosa_rugosa Rorug06G0394300
rosa_samantha Rh6AG511200 Rh6BG522200 Rh6CG528000 Rh6DG513400
rosa_wichuraiana Rw6G044460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1484
Acc36I ACCTGC 1 cut(s) 1484
AccB1I GGYRCC 2 cut(s) 707, 1689
AccB7I CCANNNNNTGG 1 cut(s) 1146
AccI GTMKAC 2 cut(s) 767, 1337
AccII CGCG 1 cut(s) 158
AccIII TCCGGA 1 cut(s) 1067
AciI CCGC 7 cut(s) 153, 156, 158, 206, 948, 1203, 1592
AclWI GGATC 2 cut(s) 362, 1553
AcoI YGGCCR 1 cut(s) 267
AcsI RAATTY 4 cut(s) 822, 1046, 1207, 1729
AcuI CTGAAG 3 cut(s) 633, 1165, 1513
AfaI GTAC 3 cut(s) 227, 719, 1659
AfiI CCNNNNNNNGG 9 cut(s) 172, 276, 413, 1146, 1237, 1473, 1686, 1699, 1705
AflIII ACRYGT 2 cut(s) 762, 1439
AgsI TTSAA 9 cut(s) 90, 460, 500, 791, 857, 899, 1041, 1160, 1277
AjiI CACGTC 1 cut(s) 763
AjnI CCWGG 6 cut(s) 17, 165, 339, 1257, 1280, 1698
AjuI GAANNNNNNNTTGG 2 cut(s) 971, 1003
AloI GAACNNNNNNTCC 2 cut(s) 367, 399
AluBI AGCT 7 cut(s) 135, 326, 542, 551, 830, 1333, 1424
AluI AGCT 7 cut(s) 135, 326, 542, 551, 830, 1333, 1424
Alw21I GWGCWC 3 cut(s) 430, 553, 966
Alw26I GTCTC 2 cut(s) 166, 1430
Alw44I GTGCAC 1 cut(s) 962
AlwI GGATC 2 cut(s) 362, 1553
Ama87I CYCGRG 1 cut(s) 512
Aor13HI TCCGGA 1 cut(s) 1067
AoxI GGCC 3 cut(s) 231, 267, 1228
ApaLI GTGCAC 1 cut(s) 962
ApeKI GCWGC 4 cut(s) 217, 750, 813, 1715
ApoI RAATTY 4 cut(s) 822, 1046, 1207, 1729
ArsI GACNNNNNNTTYG 6 cut(s) 594, 626, 722, 754, 1429, 1461
Asp700I GAANNNNTTC 2 cut(s) 44, 1075
AspA2I CCTAGG 1 cut(s) 371
AspLEI GCGC 3 cut(s) 1416, 1549, 1727
AspS9I GGNCC 6 cut(s) 181, 208, 839, 1028, 1229, 1482
AsuC2I CCSGG 4 cut(s) 174, 185, 669, 1632
AsuHPI GGTGA 2 cut(s) 5, 1114
AvaI CYCGRG 1 cut(s) 512
AvaII GGWCC 5 cut(s) 181, 208, 839, 1028, 1482
AvrII CCTAGG 1 cut(s) 371
BaeGI GKGCMC 2 cut(s) 710, 966
BanI GGYRCC 2 cut(s) 707, 1689
BanII GRGCYC 2 cut(s) 553, 1712
BauI CACGAG 1 cut(s) 965
BbsI GAAGAC 2 cut(s) 864, 1747
Bbv12I GWGCWC 3 cut(s) 430, 553, 966
BbvI GCAGC 4 cut(s) 204, 762, 800, 1702
BccI CCATC 4 cut(s) 649, 1245, 1283, 1559
BceAI ACGGC 2 cut(s) 254, 271
BciT130I CCWGG 6 cut(s) 19, 167, 341, 1259, 1282, 1700
BciVI GTATCC 1 cut(s) 1314
BcnI CCSGG 4 cut(s) 174, 185, 669, 1632
BcoDI GTCTC 2 cut(s) 166, 1430
BfaI CTAG 3 cut(s) 372, 849, 1388
BfmI CTRYAG 1 cut(s) 218
BfuAI ACCTGC 1 cut(s) 1484
BfuI GTATCC 1 cut(s) 1314
BglI GCCNNNNNGGC 1 cut(s) 1753
BisI GCNGC 6 cut(s) 156, 218, 751, 814, 948, 1716
BlnI CCTAGG 1 cut(s) 371
BlsI GCNGC 6 cut(s) 157, 219, 752, 815, 949, 1717
Bme18I GGWCC 5 cut(s) 181, 208, 839, 1028, 1482
BmeT110I CYCGRG 1 cut(s) 512
BmgBI CACGTC 1 cut(s) 763
BmgT120I GGNCC 6 cut(s) 181, 208, 839, 1028, 1229, 1482
BmiI GGNNCC 5 cut(s) 171, 183, 709, 1256, 1691
BmrI ACTGGG 2 cut(s) 871, 1156
BmsI GCATC 1 cut(s) 825
BmuI ACTGGG 2 cut(s) 871, 1156
BpiI GAAGAC 2 cut(s) 864, 1747
BpmI CTGGAG 4 cut(s) 115, 435, 1303, 1740
BpuEI CTTGAG 1 cut(s) 1649
BpuMI CCSGG 4 cut(s) 174, 185, 669, 1632
BsaI GGTCTC 1 cut(s) 166
BsaJI CCNNGG 8 cut(s) 17, 156, 165, 339, 371, 513, 1055, 1748
BsaWI WCCGGW 2 cut(s) 757, 1067
BsaXI ACNNNNNCTCC 6 cut(s) 218, 248, 1276, 1306, 1482, 1512
Bsc4I CCNNNNNNNGG 9 cut(s) 172, 276, 413, 1146, 1237, 1473, 1686, 1699, 1705
Bse118I RCCGGY 1 cut(s) 1651
Bse1I ACTGG 6 cut(s) 418, 866, 1151, 1348, 1415, 1680
BseAI TCCGGA 1 cut(s) 1067
BseBI CCWGG 6 cut(s) 19, 167, 341, 1259, 1282, 1700
BseDI CCNNGG 8 cut(s) 17, 156, 165, 339, 371, 513, 1055, 1748
BseGI GGATG 1 cut(s) 872
BseLI CCNNNNNNNGG 9 cut(s) 172, 276, 413, 1146, 1237, 1473, 1686, 1699, 1705
BseMII CTCAG 1 cut(s) 307
BseNI ACTGG 6 cut(s) 418, 866, 1151, 1348, 1415, 1680
BseRI GAGGAG 5 cut(s) 118, 226, 229, 530, 602
BseSI GKGCMC 2 cut(s) 710, 966
BseXI GCAGC 4 cut(s) 204, 762, 800, 1702
Bsh1236I CGCG 1 cut(s) 158
Bsh1285I CGRYCG 1 cut(s) 1604
BshFI GGCC 3 cut(s) 233, 269, 1230
BshNI GGYRCC 2 cut(s) 707, 1689
BsiEI CGRYCG 1 cut(s) 1604
BsiHKAI GWGCWC 3 cut(s) 430, 553, 966
BsiHKCI CYCGRG 1 cut(s) 512
BsiSI CCGG 7 cut(s) 173, 185, 669, 758, 1068, 1632, 1652
BslFI GGGAC 1 cut(s) 322
BslI CCNNNNNNNGG 9 cut(s) 172, 276, 413, 1146, 1237, 1473, 1686, 1699, 1705
BsmAI GTCTC 2 cut(s) 166, 1430
BsmFI GGGAC 1 cut(s) 322
BsnI GGCC 3 cut(s) 233, 269, 1230
Bso31I GGTCTC 1 cut(s) 166
BsoBI CYCGRG 1 cut(s) 512
Bsp1286I GDGCHC 5 cut(s) 430, 553, 710, 966, 1712
Bsp13I TCCGGA 1 cut(s) 1067
Bsp143I GATC 7 cut(s) 367, 438, 529, 883, 1519, 1558, 1601
Bsp19I CCATGG 1 cut(s) 1055
BspACI CCGC 7 cut(s) 153, 156, 158, 206, 948, 1203, 1592
BspANI GGCC 3 cut(s) 233, 269, 1230
BspCNI CTCAG 1 cut(s) 306
BspEI TCCGGA 1 cut(s) 1067
BspFNI CGCG 1 cut(s) 158
BspLI GGNNCC 5 cut(s) 171, 183, 709, 1256, 1691
BspMAI CTGCAG 1 cut(s) 222
BspMI ACCTGC 1 cut(s) 1484
BspPI GGATC 2 cut(s) 362, 1553
BspT107I GGYRCC 2 cut(s) 707, 1689
BspTNI GGTCTC 1 cut(s) 166
BsrFI RCCGGY 1 cut(s) 1651
BsrI ACTGG 6 cut(s) 418, 866, 1151, 1348, 1415, 1680
BssAI RCCGGY 1 cut(s) 1651
BssECI CCNNGG 8 cut(s) 17, 156, 165, 339, 371, 513, 1055, 1748
BssMI GATC 7 cut(s) 367, 438, 529, 883, 1519, 1558, 1601
BssNAI GTATAC 1 cut(s) 768
BssSI CACGAG 1 cut(s) 965
BssT1I CCWWGG 2 cut(s) 371, 1055
Bst1107I GTATAC 1 cut(s) 768
Bst2BI CACGAG 1 cut(s) 965
Bst2UI CCWGG 6 cut(s) 19, 167, 341, 1259, 1282, 1700
Bst4CI ACNGT 3 cut(s) 35, 559, 805
Bst6I CTCTTC 2 cut(s) 1092, 1100
BstC8I GCNNGC 4 cut(s) 24, 153, 426, 1062
BstDEI CTNAG 3 cut(s) 293, 663, 687
BstDSI CCRYGG 3 cut(s) 156, 1055, 1748
BstF5I GGATG 1 cut(s) 872
BstFNI CGCG 1 cut(s) 158
BstHHI GCGC 3 cut(s) 1416, 1549, 1727
BstKTI GATC 7 cut(s) 370, 441, 532, 886, 1522, 1561, 1604
BstMAI GTCTC 2 cut(s) 166, 1430
BstMBI GATC 7 cut(s) 367, 438, 529, 883, 1519, 1558, 1601
BstMCI CGRYCG 1 cut(s) 1604
BstMWI GCNNNNNNNGC 4 cut(s) 425, 548, 1724, 1753
BstNI CCWGG 6 cut(s) 19, 167, 341, 1259, 1282, 1700
BstNSI RCATGY 1 cut(s) 1443
BstSFI CTRYAG 1 cut(s) 218
BstSLI GKGCMC 2 cut(s) 710, 966
BstUI CGCG 1 cut(s) 158
BstV1I GCAGC 4 cut(s) 204, 762, 800, 1702
BstV2I GAAGAC 2 cut(s) 864, 1747
BstXI CCANNNNNNTGG 2 cut(s) 398, 1226
BstZ17I GTATAC 1 cut(s) 768
BsuI GTATCC 1 cut(s) 1314
BsuRI GGCC 3 cut(s) 233, 269, 1230
BtgI CCRYGG 3 cut(s) 156, 1055, 1748
BtrI CACGTC 1 cut(s) 763
BtsCI GGATG 1 cut(s) 872
BtsI GCAGTG 1 cut(s) 589
BtsIMutI CAGTG 4 cut(s) 31, 589, 657, 1341
BveI ACCTGC 1 cut(s) 1484
Cac8I GCNNGC 4 cut(s) 24, 153, 426, 1062
CfoI GCGC 3 cut(s) 1416, 1549, 1727
Cfr10I RCCGGY 1 cut(s) 1651
Cfr13I GGNCC 6 cut(s) 181, 208, 839, 1028, 1229, 1482
Cfr42I CCGCGG 1 cut(s) 159
CseI GACGC 1 cut(s) 1325
Csp6I GTAC 3 cut(s) 226, 718, 1658
CspCI CAANNNNNGTGG 2 cut(s) 1221, 1256
CviAII CATG 6 cut(s) 118, 503, 1056, 1351, 1417, 1440
CviQI GTAC 3 cut(s) 226, 718, 1658
DdeI CTNAG 3 cut(s) 293, 663, 687
DpnI GATC 7 cut(s) 369, 440, 531, 885, 1521, 1560, 1603
DpnII GATC 7 cut(s) 367, 438, 529, 883, 1519, 1558, 1601
EaeI YGGCCR 1 cut(s) 267
Eam1104I CTCTTC 2 cut(s) 1092, 1100
EarI CTCTTC 2 cut(s) 1092, 1100
Ecl136II GAGCTC 1 cut(s) 551
Eco130I CCWWGG 2 cut(s) 371, 1055
Eco24I GRGCYC 2 cut(s) 553, 1712
Eco31I GGTCTC 1 cut(s) 166
Eco47I GGWCC 5 cut(s) 181, 208, 839, 1028, 1482
Eco53kI GAGCTC 1 cut(s) 551
Eco57I CTGAAG 3 cut(s) 633, 1165, 1513
Eco88I CYCGRG 1 cut(s) 512
EcoICRI GAGCTC 1 cut(s) 551
EcoO109I RGGNCCY 1 cut(s) 1028
EcoRI GAATTC 1 cut(s) 1207
EcoRII CCWGG 6 cut(s) 17, 165, 339, 1257, 1280, 1698
EcoT14I CCWWGG 2 cut(s) 371, 1055
EcoT38I GRGCYC 2 cut(s) 553, 1712
ErhI CCWWGG 2 cut(s) 371, 1055
FaeI CATG 6 cut(s) 121, 506, 1059, 1354, 1420, 1443
FaqI GGGAC 1 cut(s) 322
FatI CATG 6 cut(s) 117, 502, 1055, 1350, 1416, 1439
FauI CCCGC 2 cut(s) 160, 1196
FblI GTMKAC 2 cut(s) 767, 1337
Fnu4HI GCNGC 6 cut(s) 156, 218, 751, 814, 948, 1716
FokI GGATG 1 cut(s) 879
FriOI GRGCYC 2 cut(s) 553, 1712
Fsp4HI GCNGC 6 cut(s) 156, 218, 751, 814, 948, 1716
FspBI CTAG 3 cut(s) 372, 849, 1388
GlaI GCGC 3 cut(s) 1415, 1548, 1726
GluI GCNGC 6 cut(s) 156, 218, 751, 814, 948, 1716
GsuI CTGGAG 4 cut(s) 115, 435, 1303, 1740
HaeIII GGCC 3 cut(s) 233, 269, 1230
HapII CCGG 7 cut(s) 173, 185, 669, 758, 1068, 1632, 1652
HgaI GACGC 1 cut(s) 1325
HhaI GCGC 3 cut(s) 1416, 1549, 1727
Hin1II CATG 6 cut(s) 121, 506, 1059, 1354, 1420, 1443
Hin6I GCGC 3 cut(s) 1414, 1547, 1725
HinP1I GCGC 3 cut(s) 1414, 1547, 1725
HincII GTYRAC 1 cut(s) 1338
HindII GTYRAC 1 cut(s) 1338
HindIII AAGCTT 2 cut(s) 324, 540
HinfI GANTC 7 cut(s) 99, 146, 466, 520, 1136, 1277, 1347
HpaII CCGG 7 cut(s) 173, 185, 669, 758, 1068, 1632, 1652
HphI GGTGA 2 cut(s) 5, 1114
Hpy166II GTNNAC 5 cut(s) 679, 768, 842, 964, 1338
Hpy188I TCNGA 6 cut(s) 39, 113, 296, 438, 471, 1539
Hpy188III TCNNGA 7 cut(s) 179, 283, 976, 1068, 1394, 1435, 1562
Hpy8I GTNNAC 5 cut(s) 679, 768, 842, 964, 1338
Hpy99I CGWCG 1 cut(s) 275
HpyAV CCTTC 4 cut(s) 885, 976, 1321, 1359
HpyCH4III ACNGT 3 cut(s) 35, 559, 805
HpyCH4IV ACGT 1 cut(s) 762
HpyCH4V TGCA 8 cut(s) 220, 536, 582, 625, 655, 801, 816, 964
HpyF10VI GCNNNNNNNGC 4 cut(s) 425, 548, 1724, 1753
HpyF3I CTNAG 3 cut(s) 293, 663, 687
HpySE526I ACGT 1 cut(s) 762
Hsp92II CATG 6 cut(s) 121, 506, 1059, 1354, 1420, 1443
HspAI GCGC 3 cut(s) 1414, 1547, 1725
Kpn2I TCCGGA 1 cut(s) 1067
KspI CCGCGG 1 cut(s) 159
Kzo9I GATC 7 cut(s) 367, 438, 529, 883, 1519, 1558, 1601
LmnI GCTCC 9 cut(s) 140, 196, 416, 548, 1243, 1254, 1330, 1421, 1490
Lsp1109I GCAGC 4 cut(s) 204, 762, 800, 1702
LweI GCATC 1 cut(s) 825
MaeI CTAG 3 cut(s) 372, 849, 1388
MaeII ACGT 1 cut(s) 762
MaeIII GTNAC 2 cut(s) 690, 1523
MalI GATC 7 cut(s) 369, 440, 531, 885, 1521, 1560, 1603
MboI GATC 7 cut(s) 367, 438, 529, 883, 1519, 1558, 1601
MboII GAAGA 9 cut(s) 472, 475, 639, 869, 991, 1109, 1117, 1529, 1752
MfeI CAATTG 1 cut(s) 906
MhlI GDGCHC 5 cut(s) 430, 553, 710, 966, 1712
MlyI GAGTC 1 cut(s) 93
MmeI TCCRAC 2 cut(s) 136, 1480
MroI TCCGGA 1 cut(s) 1067
MroXI GAANNNNTTC 2 cut(s) 44, 1075
MseI TTAA 2 cut(s) 486, 593
MslI CAYNNNNRTG 2 cut(s) 713, 1224
MspA1I CMGCKG 1 cut(s) 158
MspI CCGG 7 cut(s) 173, 185, 669, 758, 1068, 1632, 1652
MunI CAATTG 1 cut(s) 906
MvaI CCWGG 6 cut(s) 19, 167, 341, 1259, 1282, 1700
MvnI CGCG 1 cut(s) 158
MwoI GCNNNNNNNGC 4 cut(s) 425, 548, 1724, 1753
NciI CCSGG 4 cut(s) 174, 185, 669, 1632
NcoI CCATGG 1 cut(s) 1055
NdeII GATC 7 cut(s) 367, 438, 529, 883, 1519, 1558, 1601
NlaIII CATG 6 cut(s) 121, 506, 1059, 1354, 1420, 1443
NlaIV GGNNCC 5 cut(s) 171, 183, 709, 1256, 1691
NmeAIII GCCGAG 2 cut(s) 209, 1691
NspI RCATGY 1 cut(s) 1443
PaqCI CACCTGC 1 cut(s) 1484
PciI ACATGT 1 cut(s) 1439
PdmI GAANNNNTTC 2 cut(s) 44, 1075
PfeI GAWTC 6 cut(s) 146, 466, 520, 1136, 1277, 1347
PflMI CCANNNNNTGG 1 cut(s) 1146
PfoI TCCNGGA 2 cut(s) 1280, 1630
PkrI GCNGC 6 cut(s) 157, 219, 752, 815, 949, 1717
Ple19I CGATCG 1 cut(s) 1604
PleI GAGTC 1 cut(s) 93
PpsI GAGTC 1 cut(s) 93
PpuMI RGGWCCY 1 cut(s) 1028
PscI ACATGT 1 cut(s) 1439
Psp124BI GAGCTC 1 cut(s) 553
Psp5II RGGWCCY 1 cut(s) 1028
Psp6I CCWGG 6 cut(s) 17, 165, 339, 1257, 1280, 1698
PspGI CCWGG 6 cut(s) 17, 165, 339, 1257, 1280, 1698
PspN4I GGNNCC 5 cut(s) 171, 183, 709, 1256, 1691
PspPI GGNCC 6 cut(s) 181, 208, 839, 1028, 1229, 1482
PspPPI RGGWCCY 1 cut(s) 1028
PstI CTGCAG 1 cut(s) 222
PvuI CGATCG 1 cut(s) 1604
RsaI GTAC 3 cut(s) 227, 719, 1659
RsaNI GTAC 3 cut(s) 226, 718, 1658
RseI CAYNNNNRTG 2 cut(s) 713, 1224
SacI GAGCTC 1 cut(s) 553
SacII CCGCGG 1 cut(s) 159
SalI GTCGAC 1 cut(s) 1336
SaqAI TTAA 2 cut(s) 486, 593
SatI GCNGC 6 cut(s) 156, 218, 751, 814, 948, 1716
Sau3AI GATC 7 cut(s) 367, 438, 529, 883, 1519, 1558, 1601
Sau96I GGNCC 6 cut(s) 181, 208, 839, 1028, 1229, 1482
SchI GAGTC 1 cut(s) 93
SduI GDGCHC 5 cut(s) 430, 553, 710, 966, 1712
SfaNI GCATC 1 cut(s) 825
SfcI CTRYAG 1 cut(s) 218
Sfr303I CCGCGG 1 cut(s) 159
SgrBI CCGCGG 1 cut(s) 159
SinI GGWCC 5 cut(s) 181, 208, 839, 1028, 1482
SmiMI CAYNNNNRTG 2 cut(s) 713, 1224
SmlI CTYRAG 1 cut(s) 1664
SmoI CTYRAG 1 cut(s) 1664
SsiI CCGC 7 cut(s) 153, 156, 158, 206, 948, 1203, 1592
SspMI CTAG 3 cut(s) 372, 849, 1388
SstI GAGCTC 1 cut(s) 553
StyI CCWWGG 2 cut(s) 371, 1055
TaaI ACNGT 3 cut(s) 35, 559, 805
TaiI ACGT 1 cut(s) 765
TaqI TCGA 5 cut(s) 441, 600, 1337, 1360, 1434
TauI GCSGC 2 cut(s) 158, 950
TfiI GAWTC 6 cut(s) 146, 466, 520, 1136, 1277, 1347
Tru1I TTAA 2 cut(s) 486, 593
Tru9I TTAA 2 cut(s) 486, 593
TscAI CASTG 4 cut(s) 38, 589, 657, 1348
TseI GCWGC 4 cut(s) 217, 750, 813, 1715
TspDTI ATGAA 9 cut(s) 37, 488, 867, 938, 1078, 1110, 1128, 1339, 1340
TspGWI ACGGA 2 cut(s) 1032, 1636
TspRI CASTG 4 cut(s) 38, 589, 657, 1348
Van91I CCANNNNNTGG 1 cut(s) 1146
VneI GTGCAC 1 cut(s) 962
VpaK11BI GGWCC 5 cut(s) 181, 208, 839, 1028, 1482
XapI RAATTY 4 cut(s) 822, 1046, 1207, 1729
XceI RCATGY 1 cut(s) 1443
XmaJI CCTAGG 1 cut(s) 371
XmiI GTMKAC 2 cut(s) 767, 1337
XmnI GAANNNNTTC 2 cut(s) 44, 1075
XspI CTAG 3 cut(s) 372, 849, 1388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.