Rh6CG528000

Cryptochrome DASH

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0016105
Physical Location & Seq
Forward (+)
68196878 .. 68205978
9101 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG528000.1

Sequence Viewer

Length: 1716 bp
ATGGCTGTTCTTCACTCCTCGCTCGCTCCATACTCTCTGAAAAAGCTCATTCTCATCCCACATCTGAAACCCAGAAAAATCTTTCATTTCCAAGCCATGAGCTCCAGCTCCAGACCGGAACCCGCTGCCTTAGTCCACAAGGTTCCGGGTCTGGACCCGGACGAAATGGACCGTGTCTCGGACCAAACCTTTCAGAGGTATACCTCCTCTTCTGTTAAGAGAAACGGCAATGGGGTCGCCATTGTTTGGTTTCGAAACGATCTGAGGGTTCTGGACAATGAGGCTCTCTTTAAGGCCTGGCTTTCGTCCCTGGAGGTTTTGCCTGTCTATTGCATCGATCCCAGGCTTTTTGGCTCTACCTATTACTTTGGTTTTCCTAAAACTGGAGCGTTGAGAGCGCAATTTCTTGTTGAATCCTTGGCTGACTTGAAGAAGAATTTAACGAAGCGGGGTCTTAACTTGCTCATTCAATATGGGAAGCCTGAGGAGGTTCTGCCTTCTCTTGCAAAAACATATGGAGTCCACACAGTATATGCCCAAAAAGAAACTTGCAGTGAAGAGCTGAGTGTGGAAAGATCGGTCAGCAAAGGTCTGCGGCGAGTGGTTTTACAGAGTCCTATGATTAATCCCAAGCTACAACTTATATGGGGCACCACTATGTACCACATAGATGACCTCCCGTTTGATACCAGTAGTTTACCGGATGTCTATACTCAGTTTCGCAAGTCTGTTGAAGCGAAATGCTCTGTTCGTGGCTGCATAAGAATGCCAGCATCTCTGGGGCCATCACCCAGCATTGAGGACTGGGGATGTGTTCCTTCATTAGATCAGTTTGGACTTCAACATCAAAATGTAAGTTTAGGAATGCAGTTTGTTGGGGGTGAAAGCGCAGCATTGGGCAGAATAAATGAGTATTTCTGGAAGAAGGATCTGCTAAGTATATATAAAAAGACCAGAAATGGGATGTTAGGACTGTTGGGACCTGATTATTCAACAAAGTTTTCTCCTTGGCTTGCTTCAGGAAGCCTTTCTCCTCGTCTCGTACACGAAGAGGTAAAGAGGTATGAAAAAGAAAGGCAAGCAAATGATTCCACTTACTGGTTATTGTTCGAACTGATATGGAGGGATTACTTCAGGTTTCTATCAGTAAAATATGGGAATTCTCTTTTCCATCCAGGTGGCCCAAGAAAATTGGAGCATAGATGGAGCCAAGAAAAGACTTTATTTGAGACCTGGAGAGATGGCCATACAGGGTACCCACTCATAGATGCGAACATGAAAGAGCTGTCAACCACTGGATTCATGTCAAATCGGGGAAGACAGATTGTATGTTCCTTTCTGGTTCGAGATATGGGTATTGACTGGCGCATGGGAGCTGAATGGTTTGAGACATGCCTTTTGGATTATGACCCTTGTTCCAATTATGGTAATTGGACCTATGGAGCAGGAGTAGGAAATGACCCCAGGGAAGATCGTTACTTCAGCATTCCAAAACAAGCCCAGAATTATGATCCTGAAGGTGAGTATGTAGCGTACTGGCTTCCAAAGCTACAATCACTTCCAAAAGATAAAAGGCACTTCCCTGGACTGGCATATATCAAGCAGGTTGTCCCTCTCAAGTTTGGTAATGCTGGTAAGTATCAAAACCACGACAAGGCCTCGACTGCCAGAGGCAAAAACTTTGGAGGAAGACAAGCAAAAGGGTCCAGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_photolyase FAD_binding_7

Protein Analysis

571

Amino Acids

65.16

Weight (kDa)

9.32

Isoelectric Point (pI)

36.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_photolyase PF00875 80 - 249 3.1e-37 DNA photolyase
FAD_binding_7 PF03441 369 - 529 2.3e-51 FAD binding domain of DNA photolyase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016105)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G24850
fragaria_vesca FvH4_2g30661
malus_domestica MD15G1110200.v1.1
prunus_persica Prupe.1G462400_v2.0.a1
pyrus_communis pycom15g10040
rosa_chinensis RchiOBHm_Chr6g0312231
rosa_laevigata RLG00000010340
rosa_multiflora Rmu_sc0010924.1_g000003
rosa_roxburghii Rroxscaffold_7G00156930
rosa_rugosa Rorug06G0394300
rosa_samantha Rh6AG511200 Rh6BG522200 Rh6CG528000 Rh6DG513400
rosa_wichuraiana Rw6G044460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1594
Acc65I GGTACC 1 cut(s) 1254
AccB1I GGYRCC 2 cut(s) 650, 1254
AccB7I CCANNNNNTGG 2 cut(s) 246, 1098
AccI GTMKAC 1 cut(s) 200
AciI CCGC 3 cut(s) 123, 448, 595
AclWI GGATC 3 cut(s) 332, 936, 1505
AcoI YGGCCR 1 cut(s) 1243
AcsI RAATTY 2 cut(s) 436, 1159
AcuI CTGAAG 4 cut(s) 1002, 1117, 1465, 1536
AfaI GTAC 4 cut(s) 662, 1044, 1256, 1535
AfiI CCNNNNNNNGG 8 cut(s) 178, 195, 246, 383, 960, 1098, 1588, 1654
AgsI TTSAA 6 cut(s) 413, 430, 470, 734, 842, 993
AjnI CCWGG 8 cut(s) 296, 309, 341, 1174, 1232, 1463, 1582, 1706
AluBI AGCT 8 cut(s) 46, 102, 108, 562, 634, 1285, 1376, 1549
AluI AGCT 8 cut(s) 46, 102, 108, 562, 634, 1285, 1376, 1549
Alw21I GWGCWC 1 cut(s) 104
Alw26I GTCTC 4 cut(s) 181, 1043, 1223, 1382
AlwI GGATC 3 cut(s) 332, 936, 1505
AoxI GGCC 5 cut(s) 294, 782, 1180, 1243, 1656
ApeKI GCWGC 3 cut(s) 125, 756, 890
ApoI RAATTY 2 cut(s) 436, 1159
ArsI GACNNNNNNTTYG 4 cut(s) 665, 697, 1381, 1413
AseI ATTAAT 1 cut(s) 624
Asp700I GAANNNNTTC 1 cut(s) 1027
Asp718I GGTACC 1 cut(s) 1254
AspLEI GCGC 3 cut(s) 400, 890, 1368
AspS9I GGNCC 8 cut(s) 154, 169, 181, 782, 980, 1181, 1434, 1704
AsuC2I CCSGG 2 cut(s) 147, 158
AsuHPI GGTGA 3 cut(s) 780, 893, 1532
AsuII TTCGAA 2 cut(s) 253, 1110
AvaII GGWCC 6 cut(s) 154, 169, 181, 980, 1434, 1704
AxyI CCTNAGG 1 cut(s) 483
BaeGI GKGCMC 1 cut(s) 653
BalI TGGCCA 1 cut(s) 1245
BanI GGYRCC 2 cut(s) 650, 1254
BanII GRGCYC 1 cut(s) 104
BbsI GAAGAC 2 cut(s) 1324, 1696
Bbv12I GWGCWC 1 cut(s) 104
BbvI GCAGC 3 cut(s) 112, 743, 902
BccI CCATC 4 cut(s) 793, 1179, 1197, 1235
BceAI ACGGC 1 cut(s) 241
BcgI CGANNNNNNTGC 2 cut(s) 217, 251
BciT130I CCWGG 8 cut(s) 298, 311, 343, 1176, 1234, 1465, 1584, 1708
BcnI CCSGG 2 cut(s) 147, 158
BcoDI GTCTC 4 cut(s) 181, 1043, 1223, 1382
BfuAI ACCTGC 1 cut(s) 1594
BisI GCNGC 4 cut(s) 126, 596, 757, 891
BlsI GCNGC 4 cut(s) 127, 597, 758, 892
Bme18I GGWCC 6 cut(s) 154, 169, 181, 980, 1434, 1704
BmgT120I GGNCC 8 cut(s) 154, 169, 181, 782, 980, 1181, 1434, 1704
BmiI GGNNCC 9 cut(s) 120, 144, 156, 652, 783, 981, 1208, 1256, 1705
BmrI ACTGGG 1 cut(s) 814
BmsI GCATC 3 cut(s) 342, 782, 1258
BmuI ACTGGG 1 cut(s) 814
BpiI GAAGAC 2 cut(s) 1324, 1696
BpmI CTGGAG 5 cut(s) 88, 94, 332, 405, 1255
Bpu14I TTCGAA 2 cut(s) 253, 1110
BpuEI CTTGAG 1 cut(s) 1601
BpuMI CCSGG 2 cut(s) 147, 158
Bsa29I ATCGAT 1 cut(s) 336
BsaI GGTCTC 1 cut(s) 1223
BsaJI CCNNGG 7 cut(s) 309, 341, 417, 1007, 1463, 1464, 1582
BsaWI WCCGGW 2 cut(s) 115, 700
BsaXI ACNNNNNCTCC 2 cut(s) 1434, 1464
Bsc4I CCNNNNNNNGG 8 cut(s) 178, 195, 246, 383, 960, 1098, 1588, 1654
Bse1I ACTGG 8 cut(s) 388, 690, 809, 1103, 1300, 1367, 1541, 1593
Bse21I CCTNAGG 1 cut(s) 483
Bse3DI GCAATG 1 cut(s) 235
BseBI CCWGG 8 cut(s) 298, 311, 343, 1176, 1234, 1465, 1584, 1708
BseCI ATCGAT 1 cut(s) 336
BseDI CCNNGG 7 cut(s) 309, 341, 417, 1007, 1463, 1464, 1582
BseGI GGATG 5 cut(s) 54, 709, 815, 969, 1171
BseLI CCNNNNNNNGG 8 cut(s) 178, 195, 246, 383, 960, 1098, 1588, 1654
BseMI GCAATG 1 cut(s) 235
BseMII CTCAG 4 cut(s) 254, 474, 554, 728
BseNI ACTGG 8 cut(s) 388, 690, 809, 1103, 1300, 1367, 1541, 1593
BseRI GAGGAG 4 cut(s) 7, 196, 500, 1023
BseSI GKGCMC 1 cut(s) 653
BseXI GCAGC 3 cut(s) 112, 743, 902
BseYI CCCAGC 1 cut(s) 791
BshFI GGCC 5 cut(s) 296, 784, 1182, 1245, 1658
BshNI GGYRCC 2 cut(s) 650, 1254
BshVI ATCGAT 1 cut(s) 336
BsiHKAI GWGCWC 1 cut(s) 104
BsiSI CCGG 4 cut(s) 116, 146, 158, 701
BslFI GGGAC 3 cut(s) 292, 993, 1595
BslI CCNNNNNNNGG 8 cut(s) 178, 195, 246, 383, 960, 1098, 1588, 1654
BsmAI GTCTC 4 cut(s) 181, 1043, 1223, 1382
BsmBI CGTCTC 1 cut(s) 1043
BsmFI GGGAC 3 cut(s) 292, 993, 1595
BsmI GAATGC 3 cut(s) 771, 870, 1485
BsnI GGCC 5 cut(s) 296, 784, 1182, 1245, 1658
Bso31I GGTCTC 1 cut(s) 1223
Bsp119I TTCGAA 2 cut(s) 253, 1110
Bsp1286I GDGCHC 2 cut(s) 104, 653
Bsp143I GATC 7 cut(s) 259, 337, 575, 826, 928, 1471, 1510
BspACI CCGC 3 cut(s) 123, 448, 595
BspANI GGCC 5 cut(s) 296, 784, 1182, 1245, 1658
BspCNI CTCAG 4 cut(s) 255, 475, 555, 727
BspDI ATCGAT 1 cut(s) 336
BspLI GGNNCC 9 cut(s) 120, 144, 156, 652, 783, 981, 1208, 1256, 1705
BspMI ACCTGC 1 cut(s) 1594
BspPI GGATC 3 cut(s) 332, 936, 1505
BspQI GCTCTTC 1 cut(s) 552
BspT104I TTCGAA 2 cut(s) 253, 1110
BspT107I GGYRCC 2 cut(s) 650, 1254
BspTNI GGTCTC 1 cut(s) 1223
BsrDI GCAATG 1 cut(s) 235
BsrI ACTGG 8 cut(s) 388, 690, 809, 1103, 1300, 1367, 1541, 1593
BssECI CCNNGG 7 cut(s) 309, 341, 417, 1007, 1463, 1464, 1582
BssMI GATC 7 cut(s) 259, 337, 575, 826, 928, 1471, 1510
BssNAI GTATAC 1 cut(s) 201
BssT1I CCWWGG 2 cut(s) 417, 1007
Bst1107I GTATAC 1 cut(s) 201
Bst2UI CCWGG 8 cut(s) 298, 311, 343, 1176, 1234, 1465, 1584, 1708
Bst4CI ACNGT 3 cut(s) 173, 529, 975
Bst6I CTCTTC 3 cut(s) 214, 552, 1044
BstBI TTCGAA 2 cut(s) 253, 1110
BstC8I GCNNGC 4 cut(s) 24, 771, 1014, 1080
BstDEI CTNAG 6 cut(s) 130, 263, 483, 563, 714, 935
BstENI CCTNNNNNAGG 1 cut(s) 193
BstF5I GGATG 5 cut(s) 54, 709, 815, 969, 1171
BstHHI GCGC 3 cut(s) 400, 890, 1368
BstKTI GATC 7 cut(s) 262, 340, 578, 829, 931, 1474, 1513
BstMAI GTCTC 4 cut(s) 181, 1043, 1223, 1382
BstMBI GATC 7 cut(s) 259, 337, 575, 826, 928, 1471, 1510
BstMWI GCNNNNNNNGC 3 cut(s) 395, 1546, 1664
BstNI CCWGG 8 cut(s) 298, 311, 343, 1176, 1234, 1465, 1584, 1708
BstNSI RCATGY 1 cut(s) 1395
BstSLI GKGCMC 1 cut(s) 653
BstV1I GCAGC 3 cut(s) 112, 743, 902
BstV2I GAAGAC 2 cut(s) 1324, 1696
BstX2I RGATCY 1 cut(s) 928
BstXI CCANNNNNNTGG 1 cut(s) 1178
BstYI RGATCY 1 cut(s) 928
BstZ17I GTATAC 1 cut(s) 201
Bsu15I ATCGAT 1 cut(s) 336
Bsu36I CCTNAGG 1 cut(s) 483
BsuRI GGCC 5 cut(s) 296, 784, 1182, 1245, 1658
BsuTUI ATCGAT 1 cut(s) 336
BtsCI GGATG 5 cut(s) 54, 709, 815, 969, 1171
BtsI GCAGTG 1 cut(s) 559
BtsIMutI CAGTG 2 cut(s) 559, 1293
BveI ACCTGC 1 cut(s) 1594
Cac8I GCNNGC 4 cut(s) 24, 771, 1014, 1080
CfoI GCGC 3 cut(s) 400, 890, 1368
Cfr13I GGNCC 8 cut(s) 154, 169, 181, 782, 980, 1181, 1434, 1704
ClaI ATCGAT 1 cut(s) 336
Csp6I GTAC 4 cut(s) 661, 1043, 1255, 1534
CviAII CATG 5 cut(s) 97, 1276, 1303, 1369, 1392
CviQI GTAC 4 cut(s) 661, 1043, 1255, 1534
DdeI CTNAG 6 cut(s) 130, 263, 483, 563, 714, 935
DpnI GATC 7 cut(s) 261, 339, 577, 828, 930, 1473, 1512
DpnII GATC 7 cut(s) 259, 337, 575, 826, 928, 1471, 1510
EaeI YGGCCR 1 cut(s) 1243
Eam1104I CTCTTC 3 cut(s) 214, 552, 1044
EarI CTCTTC 3 cut(s) 214, 552, 1044
Ecl136II GAGCTC 1 cut(s) 102
Eco130I CCWWGG 2 cut(s) 417, 1007
Eco147I AGGCCT 2 cut(s) 296, 1658
Eco24I GRGCYC 1 cut(s) 104
Eco31I GGTCTC 1 cut(s) 1223
Eco47I GGWCC 6 cut(s) 154, 169, 181, 980, 1434, 1704
Eco53kI GAGCTC 1 cut(s) 102
Eco57I CTGAAG 4 cut(s) 1002, 1117, 1465, 1536
Eco81I CCTNAGG 1 cut(s) 483
EcoICRI GAGCTC 1 cut(s) 102
EcoNI CCTNNNNNAGG 1 cut(s) 193
EcoO109I RGGNCCY 1 cut(s) 980
EcoRI GAATTC 1 cut(s) 1159
EcoRII CCWGG 8 cut(s) 296, 309, 341, 1174, 1232, 1463, 1582, 1706
EcoT14I CCWWGG 2 cut(s) 417, 1007
EcoT38I GRGCYC 1 cut(s) 104
ErhI CCWWGG 2 cut(s) 417, 1007
Esp3I CGTCTC 1 cut(s) 1043
FaeI CATG 5 cut(s) 100, 1279, 1306, 1372, 1395
FaqI GGGAC 3 cut(s) 292, 993, 1595
FatI CATG 5 cut(s) 96, 1275, 1302, 1368, 1391
FauI CCCGC 2 cut(s) 130, 441
FauNDI CATATG 1 cut(s) 514
FblI GTMKAC 1 cut(s) 200
Fnu4HI GCNGC 4 cut(s) 126, 596, 757, 891
FokI GGATG 5 cut(s) 41, 716, 822, 976, 1158
FriOI GRGCYC 1 cut(s) 104
Fsp4HI GCNGC 4 cut(s) 126, 596, 757, 891
GlaI GCGC 3 cut(s) 399, 889, 1367
GluI GCNGC 4 cut(s) 126, 596, 757, 891
GsaI CCCAGC 1 cut(s) 795
GsuI CTGGAG 5 cut(s) 88, 94, 332, 405, 1255
HaeIII GGCC 5 cut(s) 296, 784, 1182, 1245, 1658
HapII CCGG 4 cut(s) 116, 146, 158, 701
HhaI GCGC 3 cut(s) 400, 890, 1368
Hin1II CATG 5 cut(s) 100, 1279, 1306, 1372, 1395
Hin6I GCGC 3 cut(s) 398, 888, 1366
HinP1I GCGC 3 cut(s) 398, 888, 1366
HincII GTYRAC 1 cut(s) 1290
HindII GTYRAC 1 cut(s) 1290
HinfI GANTC 5 cut(s) 413, 519, 613, 1088, 1299
HpaII CCGG 4 cut(s) 116, 146, 158, 701
HphI GGTGA 3 cut(s) 780, 893, 1532
Hpy166II GTNNAC 6 cut(s) 136, 201, 523, 698, 1045, 1290
Hpy188I TCNGA 5 cut(s) 39, 66, 181, 195, 264
Hpy188III TCNNGA 7 cut(s) 111, 152, 272, 919, 1020, 1346, 1514
Hpy8I GTNNAC 6 cut(s) 136, 201, 523, 698, 1045, 1290
HpyAV CCTTC 4 cut(s) 507, 828, 919, 1511
HpyCH4III ACNGT 3 cut(s) 173, 529, 975
HpyCH4V TGCA 5 cut(s) 333, 506, 552, 759, 868
HpyF10VI GCNNNNNNNGC 3 cut(s) 395, 1546, 1664
HpyF3I CTNAG 6 cut(s) 130, 263, 483, 563, 714, 935
Hsp92II CATG 5 cut(s) 100, 1279, 1306, 1372, 1395
HspAI GCGC 3 cut(s) 398, 888, 1366
KpnI GGTACC 1 cut(s) 1258
Kzo9I GATC 7 cut(s) 259, 337, 575, 826, 928, 1471, 1510
LguI GCTCTTC 1 cut(s) 552
LmnI GCTCC 8 cut(s) 31, 107, 113, 386, 1195, 1206, 1373, 1442
Lsp1109I GCAGC 3 cut(s) 112, 743, 902
LweI GCATC 3 cut(s) 342, 782, 1258
MaeIII GTNAC 1 cut(s) 1475
MalI GATC 7 cut(s) 261, 339, 577, 828, 930, 1473, 1512
MboI GATC 7 cut(s) 259, 337, 575, 826, 928, 1471, 1510
MboII GAAGA 9 cut(s) 201, 442, 445, 569, 934, 1061, 1329, 1481, 1701
MflI RGATCY 1 cut(s) 928
MhlI GDGCHC 2 cut(s) 104, 653
MlsI TGGCCA 1 cut(s) 1245
MluCI AATT 7 cut(s) 401, 436, 1159, 1190, 1420, 1429, 1504
MluNI TGGCCA 1 cut(s) 1245
MlyI GAGTC 2 cut(s) 528, 622
Mox20I TGGCCA 1 cut(s) 1245
MroXI GAANNNNTTC 1 cut(s) 1027
MscI TGGCCA 1 cut(s) 1245
MseI TTAA 5 cut(s) 216, 291, 440, 456, 624
MslI CAYNNNNRTG 5 cut(s) 656, 669, 764, 849, 1176
Msp20I TGGCCA 1 cut(s) 1245
MspA1I CMGCKG 1 cut(s) 125
MspI CCGG 4 cut(s) 116, 146, 158, 701
Mva1269I GAATGC 3 cut(s) 771, 870, 1485
MvaI CCWGG 8 cut(s) 298, 311, 343, 1176, 1234, 1465, 1584, 1708
MwoI GCNNNNNNNGC 3 cut(s) 395, 1546, 1664
NciI CCSGG 2 cut(s) 147, 158
NdeI CATATG 1 cut(s) 514
NdeII GATC 7 cut(s) 259, 337, 575, 826, 928, 1471, 1510
NlaIII CATG 5 cut(s) 100, 1279, 1306, 1372, 1395
NlaIV GGNNCC 9 cut(s) 120, 144, 156, 652, 783, 981, 1208, 1256, 1705
NspI RCATGY 1 cut(s) 1395
NspV TTCGAA 2 cut(s) 253, 1110
PasI CCCWGGG 1 cut(s) 1464
PceI AGGCCT 2 cut(s) 296, 1658
PciSI GCTCTTC 1 cut(s) 552
PctI GAATGC 3 cut(s) 771, 870, 1485
PdmI GAANNNNTTC 1 cut(s) 1027
PfeI GAWTC 3 cut(s) 413, 1088, 1299
PflFI GACNNNGTC 1 cut(s) 173
PflMI CCANNNNNTGG 2 cut(s) 246, 1098
PfoI TCCNGGA 1 cut(s) 1706
PkrI GCNGC 4 cut(s) 127, 597, 758, 892
PleI GAGTC 2 cut(s) 527, 621
PpsI GAGTC 2 cut(s) 527, 621
PpuMI RGGWCCY 1 cut(s) 980
PshBI ATTAAT 1 cut(s) 624
Psp124BI GAGCTC 1 cut(s) 104
Psp5II RGGWCCY 1 cut(s) 980
Psp6I CCWGG 8 cut(s) 296, 309, 341, 1174, 1232, 1463, 1582, 1706
PspFI CCCAGC 1 cut(s) 791
PspGI CCWGG 8 cut(s) 296, 309, 341, 1174, 1232, 1463, 1582, 1706
PspN4I GGNNCC 9 cut(s) 120, 144, 156, 652, 783, 981, 1208, 1256, 1705
PspPI GGNCC 8 cut(s) 154, 169, 181, 782, 980, 1181, 1434, 1704
PspPPI RGGWCCY 1 cut(s) 980
PsuI RGATCY 1 cut(s) 928
PsyI GACNNNGTC 1 cut(s) 173
RsaI GTAC 4 cut(s) 662, 1044, 1256, 1535
RsaNI GTAC 4 cut(s) 661, 1043, 1255, 1534
RseI CAYNNNNRTG 5 cut(s) 656, 669, 764, 849, 1176
SacI GAGCTC 1 cut(s) 104
SapI GCTCTTC 1 cut(s) 552
SaqAI TTAA 5 cut(s) 216, 291, 440, 456, 624
SatI GCNGC 4 cut(s) 126, 596, 757, 891
Sau3AI GATC 7 cut(s) 259, 337, 575, 826, 928, 1471, 1510
Sau96I GGNCC 8 cut(s) 154, 169, 181, 782, 980, 1181, 1434, 1704
SchI GAGTC 2 cut(s) 528, 622
SduI GDGCHC 2 cut(s) 104, 653
SfaNI GCATC 3 cut(s) 342, 782, 1258
SfuI TTCGAA 2 cut(s) 253, 1110
SinI GGWCC 6 cut(s) 154, 169, 181, 980, 1434, 1704
SmiMI CAYNNNNRTG 5 cut(s) 656, 669, 764, 849, 1176
SmlI CTYRAG 1 cut(s) 1616
SmoI CTYRAG 1 cut(s) 1616
Sse9I AATT 7 cut(s) 401, 436, 1159, 1190, 1420, 1429, 1504
SseBI AGGCCT 2 cut(s) 296, 1658
SsiI CCGC 3 cut(s) 123, 448, 595
SstI GAGCTC 1 cut(s) 104
StuI AGGCCT 2 cut(s) 296, 1658
StyI CCWWGG 2 cut(s) 417, 1007
TaaI ACNGT 3 cut(s) 173, 529, 975
TaqI TCGA 5 cut(s) 253, 336, 1110, 1345, 1661
TaqII GACCGA 1 cut(s) 568
TasI AATT 7 cut(s) 401, 436, 1159, 1190, 1420, 1429, 1504
TauI GCSGC 1 cut(s) 598
TfiI GAWTC 3 cut(s) 413, 1088, 1299
Tru1I TTAA 5 cut(s) 216, 291, 440, 456, 624
Tru9I TTAA 5 cut(s) 216, 291, 440, 456, 624
TscAI CASTG 2 cut(s) 559, 1300
TseI GCWGC 3 cut(s) 125, 756, 890
TspDTI ATGAA 5 cut(s) 74, 810, 1080, 1291, 1292
TspRI CASTG 2 cut(s) 559, 1300
Tth111I GACNNNGTC 1 cut(s) 173
Van91I CCANNNNNTGG 2 cut(s) 246, 1098
VpaK11BI GGWCC 6 cut(s) 154, 169, 181, 980, 1434, 1704
VspI ATTAAT 1 cut(s) 624
XagI CCTNNNNNAGG 1 cut(s) 193
XapI RAATTY 2 cut(s) 436, 1159
XceI RCATGY 1 cut(s) 1395
XmiI GTMKAC 1 cut(s) 200
XmnI GAANNNNTTC 1 cut(s) 1027
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.