FvH4_2g33770

isoaspartyl peptidase L-asparaginase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
25231260 .. 25233405
2146 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g33770.t1

Sequence Viewer

Length: 984 bp
ATGGGTGGTTGGGCTATTGCTGTGCACGGTGGCGCCGGTGTCGACCCTAATCTCCCTTTGGAGCGCCAAGAACAAGCCAAACAGCTCCTCACTCGCTGCCTCAATCTCGGAACCTCTGCTCTCCGTGCTGATCTTCCCGCCATTGATGTTGTTGAACTTGTTGTTAGGGAATTGGAAACGGATCCGTTCTTCAATTCCGGCCGTGGATCGGCCCTGAATGAAAATGGCAGGGTTGAGATGGAAGCCAGCATCATGGATGGACCCAAAAGACGATGCGGCGCCGTATCGGGGTTGACCACCGTCAAGAACCCGATCTCGCTCGCCCGACTCGTCATGGATAAGTCCCCTCATTCCTACCTTGCCTTCTCCGGCGCCGAAAGCTTCGCCAGGCAACAGGGCGTTGAGCTTGTGGACAATAATGACTATTTCATCACGGAGGAAAATGTGGGCATGCTCAAGTTGGCCAAAGAAGCCAACACCATCTTGTTTGATTACAGAATCCCACTTGGGATGGAGAGTTGTGCTGCTGGTGTGGAGAGCCCCATACAGATGAACGGGCTCCCCATAAGCGTGTACGCACCCGAGACAGTCGGGTGTGTGGTGGTGGACAGCCAGGGTCGCTGTGCTGCCGCTACCTCGACCGGTGGGCTCATGAACAAAATGGAAGGTCGCATTGGGGACTCGCCACTCATTGGGGCAGGTACCTATGCGTGTGACCTTTGTGGAGTGTCTTGCACAGGAGAAGGAGAGGCTATCATACGCGGGACACTGGCTCGTGAAGTTGGGGCTGTGATGGAGTACAAGGGCCTAGACCTTCAGGATGCTGTAGACTTTGTGATCAAGAACAGGCTCGATGATGGGAAGGCCGGACTCATTGCTGTGTCCAACAAAGGAGAAGTGGCTTGTGGGTTTAACTGTTGCGGAATGTTTAGGGGGAGTGCAACAGAGGATGGGTTCATGGAGGTCGGGATTTGGGATCAGTAG

Protein Analysis

328

Amino Acids

34.6

Weight (kDa)

4.65

Isoelectric Point (pI)

33.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asparaginase_2 PF01112 4 - 324 1.2e-97 Asparaginase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 689
Acc65I GGTACC 1 cut(s) 701
AccB1I GGYRCC 4 cut(s) 32, 278, 371, 701
AccB7I CCANNNNNTGG 1 cut(s) 692
AccI GTMKAC 2 cut(s) 42, 828
AccII CGCG 1 cut(s) 762
AciI CCGC 5 cut(s) 138, 276, 630, 762, 921
AclWI GGATC 3 cut(s) 176, 189, 214
AcoI YGGCCR 2 cut(s) 199, 462
AcuI CTGAAG 1 cut(s) 800
AcyI GRCGYC 3 cut(s) 33, 279, 372
AfaI GTAC 3 cut(s) 575, 703, 800
AfiI CCNNNNNNNGG 3 cut(s) 208, 288, 692
AgeI ACCGGT 1 cut(s) 641
AgsI TTSAA 2 cut(s) 155, 193
AjnI CCWGG 2 cut(s) 386, 612
AjuI GAANNNNNNNTTGG 2 cut(s) 657, 689
AluBI AGCT 3 cut(s) 85, 381, 406
AluI AGCT 3 cut(s) 85, 381, 406
Alw21I GWGCWC 1 cut(s) 27
Alw26I GTCTC 1 cut(s) 578
Alw44I GTGCAC 1 cut(s) 23
AlwI GGATC 3 cut(s) 176, 189, 214
Ama87I CYCGRG 1 cut(s) 581
AoxI GGCC 5 cut(s) 199, 210, 462, 805, 864
ApaLI GTGCAC 1 cut(s) 23
ApeKI GCWGC 3 cut(s) 96, 524, 626
AsiGI ACCGGT 1 cut(s) 641
Asp718I GGTACC 1 cut(s) 701
AspLEI GCGC 4 cut(s) 35, 66, 281, 374
AspS9I GGNCC 3 cut(s) 211, 260, 805
AvaI CYCGRG 1 cut(s) 581
AvaII GGWCC 1 cut(s) 260
BaeGI GKGCMC 1 cut(s) 27
BalI TGGCCA 1 cut(s) 464
BamHI GGATCC 1 cut(s) 181
BanI GGYRCC 4 cut(s) 32, 278, 371, 701
BanII GRGCYC 3 cut(s) 542, 561, 651
BauI CACGAG 1 cut(s) 774
Bbv12I GWGCWC 1 cut(s) 27
BbvI GCAGC 3 cut(s) 83, 511, 613
BccI CCATC 7 cut(s) 232, 251, 488, 505, 787, 851, 944
BceAI ACGGC 2 cut(s) 186, 266
BciT130I CCWGG 2 cut(s) 388, 614
BclI TGATCA 1 cut(s) 837
BcoDI GTCTC 1 cut(s) 578
BfaI CTAG 1 cut(s) 809
BfmI CTRYAG 1 cut(s) 825
BfoI RGCGCY 4 cut(s) 36, 67, 282, 375
BfuAI ACCTGC 1 cut(s) 689
BisI GCNGC 5 cut(s) 97, 277, 525, 627, 630
BlsI GCNGC 5 cut(s) 98, 278, 526, 628, 631
Bme1390I CCNGG 2 cut(s) 388, 614
Bme18I GGWCC 1 cut(s) 260
BmeT110I CYCGRG 1 cut(s) 581
BmgT120I GGNCC 3 cut(s) 211, 260, 805
BmiI GGNNCC 8 cut(s) 34, 112, 183, 262, 280, 373, 560, 703
BmrFI CCNGG 2 cut(s) 388, 614
BmsI GCATC 3 cut(s) 258, 263, 811
BoxI GACNNNNGTC 1 cut(s) 299
BpuEI CTTGAG 1 cut(s) 440
BsaHI GRCGYC 3 cut(s) 33, 279, 372
BsaJI CCNNGG 2 cut(s) 202, 613
BsaWI WCCGGW 1 cut(s) 641
Bsc4I CCNNNNNNNGG 3 cut(s) 208, 288, 692
Bse118I RCCGGY 2 cut(s) 35, 641
Bse1I ACTGG 1 cut(s) 774
Bse3DI GCAATG 1 cut(s) 873
BseBI CCWGG 2 cut(s) 388, 614
BseDI CCNNGG 2 cut(s) 202, 613
BseGI GGATG 4 cut(s) 262, 516, 826, 955
BseLI CCNNNNNNNGG 3 cut(s) 208, 288, 692
BseMI GCAATG 1 cut(s) 873
BseNI ACTGG 1 cut(s) 774
BseRI GAGGAG 1 cut(s) 77
BseSI GKGCMC 1 cut(s) 27
BseX3I CGGCCG 1 cut(s) 199
BseXI GCAGC 3 cut(s) 83, 511, 613
Bsh1236I CGCG 1 cut(s) 762
Bsh1285I CGRYCG 2 cut(s) 202, 642
BshFI GGCC 5 cut(s) 201, 212, 464, 807, 866
BshNI GGYRCC 4 cut(s) 32, 278, 371, 701
BshTI ACCGGT 1 cut(s) 641
BsiEI CGRYCG 2 cut(s) 202, 642
BsiHKAI GWGCWC 1 cut(s) 27
BsiHKCI CYCGRG 1 cut(s) 581
BsiSI CCGG 5 cut(s) 36, 198, 369, 642, 867
BslFI GGGAC 3 cut(s) 328, 692, 778
BslI CCNNNNNNNGG 3 cut(s) 208, 288, 692
BsmAI GTCTC 1 cut(s) 578
BsmFI GGGAC 3 cut(s) 328, 692, 778
BsnI GGCC 5 cut(s) 201, 212, 464, 807, 866
BsoBI CYCGRG 1 cut(s) 581
Bsp1286I GDGCHC 4 cut(s) 27, 542, 561, 651
Bsp143I GATC 6 cut(s) 130, 181, 206, 312, 837, 976
BspACI CCGC 5 cut(s) 138, 276, 630, 762, 921
BspANI GGCC 5 cut(s) 201, 212, 464, 807, 866
BspFNI CGCG 1 cut(s) 762
BspHI TCATGA 1 cut(s) 651
BspLI GGNNCC 8 cut(s) 34, 112, 183, 262, 280, 373, 560, 703
BspMI ACCTGC 1 cut(s) 689
BspPI GGATC 3 cut(s) 176, 189, 214
BspT107I GGYRCC 4 cut(s) 32, 278, 371, 701
BsrDI GCAATG 1 cut(s) 873
BsrFI RCCGGY 2 cut(s) 35, 641
BsrI ACTGG 1 cut(s) 774
BssAI RCCGGY 2 cut(s) 35, 641
BssECI CCNNGG 2 cut(s) 202, 613
BssMI GATC 6 cut(s) 130, 181, 206, 312, 837, 976
BssNI GRCGYC 3 cut(s) 33, 279, 372
BssSI CACGAG 1 cut(s) 774
Bst2BI CACGAG 1 cut(s) 774
Bst2UI CCWGG 2 cut(s) 388, 614
Bst4CI ACNGT 4 cut(s) 29, 301, 589, 917
BstACI GRCGYC 3 cut(s) 33, 279, 372
BstC8I GCNNGC 3 cut(s) 247, 321, 452
BstDSI CCRYGG 1 cut(s) 202
BstF5I GGATG 4 cut(s) 262, 516, 826, 955
BstFNI CGCG 1 cut(s) 762
BstH2I RGCGCY 4 cut(s) 36, 67, 282, 375
BstHHI GCGC 4 cut(s) 35, 66, 281, 374
BstKTI GATC 6 cut(s) 133, 184, 209, 315, 840, 979
BstMAI GTCTC 1 cut(s) 578
BstMBI GATC 6 cut(s) 130, 181, 206, 312, 837, 976
BstMCI CGRYCG 2 cut(s) 202, 642
BstMWI GCNNNNNNNGC 4 cut(s) 125, 378, 470, 618
BstNI CCWGG 2 cut(s) 388, 614
BstNSI RCATGY 1 cut(s) 454
BstPAI GACNNNNGTC 1 cut(s) 299
BstSCI CCNGG 2 cut(s) 386, 612
BstSFI CTRYAG 1 cut(s) 825
BstSLI GKGCMC 1 cut(s) 27
BstUI CGCG 1 cut(s) 762
BstV1I GCAGC 3 cut(s) 83, 511, 613
BstX2I RGATCY 1 cut(s) 181
BstXI CCANNNNNNTGG 1 cut(s) 253
BstYI RGATCY 1 cut(s) 181
BstZI CGGCCG 1 cut(s) 199
BsuRI GGCC 5 cut(s) 201, 212, 464, 807, 866
BtgI CCRYGG 1 cut(s) 202
BtsCI GGATG 4 cut(s) 262, 516, 826, 955
BtsIMutI CAGTG 1 cut(s) 767
BveI ACCTGC 1 cut(s) 689
Cac8I GCNNGC 3 cut(s) 247, 321, 452
CciI TCATGA 1 cut(s) 651
CfoI GCGC 4 cut(s) 35, 66, 281, 374
Cfr10I RCCGGY 2 cut(s) 35, 641
Cfr13I GGNCC 3 cut(s) 211, 260, 805
Csp6I GTAC 3 cut(s) 574, 702, 799
CspAI ACCGGT 1 cut(s) 641
CviAII CATG 5 cut(s) 253, 334, 451, 652, 958
CviQI GTAC 3 cut(s) 574, 702, 799
DinI GGCGCC 3 cut(s) 34, 280, 373
DpnI GATC 6 cut(s) 132, 183, 208, 314, 839, 978
DpnII GATC 6 cut(s) 130, 181, 206, 312, 837, 976
EaeI YGGCCR 2 cut(s) 199, 462
EagI CGGCCG 1 cut(s) 199
EclXI CGGCCG 1 cut(s) 199
Eco24I GRGCYC 3 cut(s) 542, 561, 651
Eco47I GGWCC 1 cut(s) 260
Eco52I CGGCCG 1 cut(s) 199
Eco57I CTGAAG 1 cut(s) 800
Eco88I CYCGRG 1 cut(s) 581
EcoO109I RGGNCCY 1 cut(s) 805
EcoRII CCWGG 2 cut(s) 386, 612
EcoT38I GRGCYC 3 cut(s) 542, 561, 651
EgeI GGCGCC 3 cut(s) 34, 280, 373
EheI GGCGCC 3 cut(s) 34, 280, 373
FaeI CATG 5 cut(s) 256, 337, 454, 655, 961
FaiI YATR 9 cut(s) 254, 335, 452, 545, 566, 653, 708, 758, 959
FaqI GGGAC 3 cut(s) 328, 692, 778
FatI CATG 5 cut(s) 252, 333, 450, 651, 957
FauI CCCGC 2 cut(s) 145, 755
FbaI TGATCA 1 cut(s) 837
FblI GTMKAC 2 cut(s) 42, 828
Fnu4HI GCNGC 5 cut(s) 97, 277, 525, 627, 630
FokI GGATG 4 cut(s) 269, 523, 833, 962
FriOI GRGCYC 3 cut(s) 542, 561, 651
Fsp4HI GCNGC 5 cut(s) 97, 277, 525, 627, 630
FspBI CTAG 1 cut(s) 809
GlaI GCGC 4 cut(s) 34, 65, 280, 373
GluI GCNGC 5 cut(s) 97, 277, 525, 627, 630
HaeII RGCGCY 4 cut(s) 36, 67, 282, 375
HaeIII GGCC 5 cut(s) 201, 212, 464, 807, 866
HapII CCGG 5 cut(s) 36, 198, 369, 642, 867
HhaI GCGC 4 cut(s) 35, 66, 281, 374
Hin1I GRCGYC 3 cut(s) 33, 279, 372
Hin1II CATG 5 cut(s) 256, 337, 454, 655, 961
Hin6I GCGC 4 cut(s) 33, 64, 279, 372
HinP1I GCGC 4 cut(s) 33, 64, 279, 372
HincII GTYRAC 2 cut(s) 43, 294
HindII GTYRAC 2 cut(s) 43, 294
HindIII AAGCTT 1 cut(s) 379
HinfI GANTC 4 cut(s) 327, 498, 680, 870
HpaII CCGG 5 cut(s) 36, 198, 369, 642, 867
Hpy166II GTNNAC 7 cut(s) 25, 43, 294, 412, 574, 607, 829
Hpy188I TCNGA 1 cut(s) 110
Hpy188III TCNNGA 6 cut(s) 304, 652, 776, 818, 841, 967
Hpy8I GTNNAC 7 cut(s) 25, 43, 294, 412, 574, 607, 829
HpyAV CCTTC 5 cut(s) 373, 659, 737, 824, 856
HpyCH4III ACNGT 4 cut(s) 29, 301, 589, 917
HpyCH4V TGCA 3 cut(s) 25, 735, 941
HpyF10VI GCNNNNNNNGC 4 cut(s) 125, 378, 470, 618
Hsp92I GRCGYC 3 cut(s) 33, 279, 372
Hsp92II CATG 5 cut(s) 256, 337, 454, 655, 961
HspAI GCGC 4 cut(s) 33, 64, 279, 372
KasI GGCGCC 3 cut(s) 32, 278, 371
KpnI GGTACC 1 cut(s) 705
Ksp22I TGATCA 1 cut(s) 837
Kzo9I GATC 6 cut(s) 130, 181, 206, 312, 837, 976
LmnI GCTCC 3 cut(s) 61, 90, 564
Lsp1109I GCAGC 3 cut(s) 83, 511, 613
LweI GCATC 3 cut(s) 258, 263, 811
MaeI CTAG 1 cut(s) 809
MaeIII GTNAC 1 cut(s) 713
MalI GATC 6 cut(s) 132, 183, 208, 314, 839, 978
MboI GATC 6 cut(s) 130, 181, 206, 312, 837, 976
MboII GAAGA 2 cut(s) 125, 181
MflI RGATCY 1 cut(s) 181
MhlI GDGCHC 4 cut(s) 27, 542, 561, 651
MlsI TGGCCA 1 cut(s) 464
MluCI AATT 2 cut(s) 170, 193
MluNI TGGCCA 1 cut(s) 464
Mly113I GGCGCC 3 cut(s) 33, 279, 372
MlyI GAGTC 3 cut(s) 321, 674, 864
MmeI TCCRAC 1 cut(s) 909
MnlI CCTC 9 cut(s) 98, 110, 124, 357, 430, 646, 742, 940, 955
Mox20I TGGCCA 1 cut(s) 464
MscI TGGCCA 1 cut(s) 464
MseI TTAA 1 cut(s) 912
MslI CAYNNNNRTG 3 cut(s) 548, 569, 878
Msp20I TGGCCA 1 cut(s) 464
MspI CCGG 5 cut(s) 36, 198, 369, 642, 867
MspR9I CCNGG 2 cut(s) 388, 614
MvaI CCWGG 2 cut(s) 388, 614
MvnI CGCG 1 cut(s) 762
MwoI GCNNNNNNNGC 4 cut(s) 125, 378, 470, 618
NarI GGCGCC 3 cut(s) 33, 279, 372
NdeII GATC 6 cut(s) 130, 181, 206, 312, 837, 976
NlaIII CATG 5 cut(s) 256, 337, 454, 655, 961
NlaIV GGNNCC 8 cut(s) 34, 112, 183, 262, 280, 373, 560, 703
NmuCI GTSAC 1 cut(s) 713
NspI RCATGY 1 cut(s) 454
PaeI GCATGC 1 cut(s) 454
PagI TCATGA 1 cut(s) 651
PcsI WCGNNNNNNNCGW 1 cut(s) 327
PfeI GAWTC 1 cut(s) 498
PflMI CCANNNNNTGG 1 cut(s) 692
PinAI ACCGGT 1 cut(s) 641
PkrI GCNGC 5 cut(s) 98, 278, 526, 628, 631
PleI GAGTC 3 cut(s) 321, 674, 864
PluTI GGCGCC 3 cut(s) 36, 282, 375
PpsI GAGTC 3 cut(s) 321, 674, 864
PshAI GACNNNNGTC 1 cut(s) 299
Psp6I CCWGG 2 cut(s) 386, 612
PspGI CCWGG 2 cut(s) 386, 612
PspN4I GGNNCC 8 cut(s) 34, 112, 183, 262, 280, 373, 560, 703
PspPI GGNCC 3 cut(s) 211, 260, 805
PsuI RGATCY 1 cut(s) 181
RsaI GTAC 3 cut(s) 575, 703, 800
RsaNI GTAC 3 cut(s) 574, 702, 799
RseI CAYNNNNRTG 3 cut(s) 548, 569, 878
SalI GTCGAC 1 cut(s) 41
SaqAI TTAA 1 cut(s) 912
SatI GCNGC 5 cut(s) 97, 277, 525, 627, 630
Sau3AI GATC 6 cut(s) 130, 181, 206, 312, 837, 976
Sau96I GGNCC 3 cut(s) 211, 260, 805
SchI GAGTC 3 cut(s) 321, 674, 864
ScrFI CCNGG 2 cut(s) 388, 614
SduI GDGCHC 4 cut(s) 27, 542, 561, 651
SfaNI GCATC 3 cut(s) 258, 263, 811
SfcI CTRYAG 1 cut(s) 825
SfoI GGCGCC 3 cut(s) 34, 280, 373
SgrAI CRCCGGYG 1 cut(s) 35
SinI GGWCC 1 cut(s) 260
SmiMI CAYNNNNRTG 3 cut(s) 548, 569, 878
SmlI CTYRAG 1 cut(s) 455
SmoI CTYRAG 1 cut(s) 455
SphI GCATGC 1 cut(s) 454
Sse9I AATT 2 cut(s) 170, 193
SsiI CCGC 5 cut(s) 138, 276, 630, 762, 921
SspDI GGCGCC 3 cut(s) 32, 278, 371
SspMI CTAG 1 cut(s) 809
StyD4I CCNGG 2 cut(s) 386, 612
TaaI ACNGT 4 cut(s) 29, 301, 589, 917
TaqI TCGA 3 cut(s) 42, 638, 852
TasI AATT 2 cut(s) 170, 193
TatI WGTACW 1 cut(s) 798
TauI GCSGC 2 cut(s) 279, 632
TfiI GAWTC 1 cut(s) 498
Tru1I TTAA 1 cut(s) 912
Tru9I TTAA 1 cut(s) 912
TscAI CASTG 1 cut(s) 774
TseFI GTSAC 1 cut(s) 713
TseI GCWGC 3 cut(s) 96, 524, 626
Tsp45I GTSAC 1 cut(s) 713
TspDTI ATGAA 5 cut(s) 234, 418, 566, 668, 946
TspGWI ACGGA 4 cut(s) 113, 174, 194, 449
TspRI CASTG 1 cut(s) 774
Van91I CCANNNNNTGG 1 cut(s) 692
VneI GTGCAC 1 cut(s) 23
VpaK11BI GGWCC 1 cut(s) 260
XceI RCATGY 1 cut(s) 454
XmiI GTMKAC 2 cut(s) 42, 828
XspI CTAG 1 cut(s) 809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.