Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0008520

Physical Location & Seq

Genomic Coordinates Reverse (-)

36883804 .. 36887614

Gene Structure 3811 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G430400.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 981 bp

ATGGGCGGGTGGGCAATCGCTGTGCACGGCGGCGCTGGTGTGGATCCCAATCTCCCGATGGAGCGTCAGGAACAGGCCAAACAACTCCTCACTCGCTGCCTCAATCTCGGCATCTCTGCTCTTCGTTCCGATCTCGCCGCCATTGATGTTGTTGAGCTTGTTGTGAGGGAATTGGAAACCGACCCCTTTTTCAACTCCGGCCGTGGATCGGCCCTCACTGAGAAAGGGACGGTGGAGATGGAAGCCAGCATCATGGATGGGCCCCAGAGACGATGCGGCGCCGTATCGGGCTTGACCACCGTTAAGAACCCGATCTCGCTGGCACGTCTCGTCATGGACAAATCCCCTCATTCCTACCTCGCCTTCTCCGGCGCCGAAGACTTCGCCCGGCAACAGGGAGTTGAGCTTGTGGAAAATGAATATTTCATCACTGAGGAAAATGTCGGCATGCTCAAGCTAGCAAAGGAAGCCAACACCATCTTGTTTGATTACAGGATCCCACTTGGAATGGAGAGTTGCAGCTCAGGTGTGGAGAGCCCGTTGCACATGAACGGGCTCCCCATTAGCGTGTATGCCCCTGAAACCGTCGGTTGCGTGGTGGTGGACAACCAGGGGCGCTGCGCTGCGGCCACATCCACTGGTGGGCTCATGAACAAAATGACGGGCCGCATTGGCGACTCACCCCTGATTGGTGCTGGCACGTATGCGGGTGACTTGTGCGGGGTCTCGTGCACGGGAGAGGGCGAGGCCATCATTCGCGGTACATTGGCGCGTGAGGTGGCAGCTGTGATGGAATACAAGGGCCTGGGCCTACAGGAGGCTGTGGACTTTGTGATCAAAGAGAGGCTTGATGATGGGAAGGCCGGGCTGATAGCGGTGTCCAACAAAGGGGAAGTGGCATGCGGGTTTAATTGTACTGGGATGTTTAGGGGCTGTGCAACTGAGGATGGGTTCATGGAGGTTGGGATTTGGGAGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004067 GO:0004175 GO:0004190 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016787 GO:0016810 GO:0016811 GO:0019538 GO:0030163 GO:0043170 GO:0044238 GO:0070001 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Asparaginase_2

Protein Analysis

327

Amino Acids

34.52

Weight (kDa)

4.69

Isoelectric Point (pI)

32.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008520)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16150
fragaria_vesca	FvH4_2g33770
malus_domestica	MD08G1092600.v1.1 MD15G1077000.v1.1
prunus_persica	Prupe.1G430400_v2.0.a1 Prupe.1G430400_v2.0.a1 Prupe.1G430400_v2.0.a1
pyrus_communis	pycom08g07530 pycom15g07170
rosa_chinensis	RchiOBHm_Chr4g0445551 RchiOBHm_Chr6g0308781
rosa_laevigata	RLG00000010619
rosa_multiflora	Rmu_sc0000871.1_g000036 Rmu_sc0009346.1_g000001 Rmu_sc0027152.1_g000001 Rmu_sc0027153.1_g000001 Rmu_sc0027154.1_g000001
rosa_roxburghii	Rroxscaffold_7G00159940
rosa_rugosa	Rorug06G0368100
rosa_samantha	Rh4DG432200 Rh6CG494400 Rh6DG479700
rosa_wichuraiana	Rw6G041790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	278, 371
AccII	CGCG	2 cut(s)	759, 772
AclWI	GGATC	5 cut(s)	38, 51, 214, 490, 503
AcoI	YGGCCR	2 cut(s)	199, 627
AcyI	GRCGYC	2 cut(s)	279, 372
AfaI	GTAC	2 cut(s)	763, 916
AfiI	CCNNNNNNNGG	6 cut(s)	208, 394, 642, 689, 817, 888
AgsI	TTSAA	1 cut(s)	193
AjiI	CACGTC	1 cut(s)	326
AjnI	CCWGG	2 cut(s)	609, 804
AluBI	AGCT	5 cut(s)	157, 406, 457, 522, 785
AluI	AGCT	5 cut(s)	157, 406, 457, 522, 785
Alw21I	GWGCWC	2 cut(s)	27, 734
Alw26I	GTCTC	3 cut(s)	262, 332, 730
Alw44I	GTGCAC	2 cut(s)	23, 730
AlwI	GGATC	5 cut(s)	38, 51, 214, 490, 503
ApaI	GGGCCC	1 cut(s)	264
ApaLI	GTGCAC	2 cut(s)	23, 730
ApeKI	GCWGC	5 cut(s)	96, 519, 618, 623, 782
AspLEI	GCGC	6 cut(s)	35, 281, 374, 618, 623, 772
AspS9I	GGNCC	6 cut(s)	211, 260, 261, 664, 802, 808
AsuC2I	CCSGG	2 cut(s)	388, 865
AsuHPI	GGTGA	2 cut(s)	672, 722
AsuNHI	GCTAGC	1 cut(s)	457
BaeGI	GKGCMC	3 cut(s)	27, 264, 734
BamHI	GGATCC	2 cut(s)	43, 495
BanI	GGYRCC	2 cut(s)	278, 371
BanII	GRGCYC	4 cut(s)	264, 539, 558, 648
BauI	CACGAG	1 cut(s)	727
BbsI	GAAGAC	1 cut(s)	384
Bbv12I	GWGCWC	2 cut(s)	27, 734
BbvI	GCAGC	5 cut(s)	83, 531, 605, 610, 794
BccI	CCATC	8 cut(s)	52, 232, 251, 485, 758, 784, 848, 941
BceAI	ACGGC	3 cut(s)	43, 186, 266
BciT130I	CCWGG	2 cut(s)	611, 806
BclI	TGATCA	1 cut(s)	834
BcnI	CCSGG	2 cut(s)	388, 865
BcoDI	GTCTC	3 cut(s)	262, 332, 730
BfaI	CTAG	1 cut(s)	458
BfmI	CTRYAG	1 cut(s)	812
BfoI	RGCGCY	4 cut(s)	36, 282, 375, 619
BglI	GCCNNNNNGGC	1 cut(s)	672
Bme1390I	CCNGG	4 cut(s)	388, 611, 806, 865
BmgBI	CACGTC	1 cut(s)	326
BmgT120I	GGNCC	6 cut(s)	211, 260, 261, 664, 802, 808
BmiI	GGNNCC	7 cut(s)	45, 262, 263, 280, 373, 497, 557
BmrFI	CCNGG	4 cut(s)	388, 611, 806, 865
BmrI	ACTGGG	1 cut(s)	927
BmsI	GCATC	3 cut(s)	120, 258, 263
BmtI	GCTAGC	1 cut(s)	461
BmuI	ACTGGG	1 cut(s)	927
BpiI	GAAGAC	1 cut(s)	384
Bpu10I	CCTNAGC	1 cut(s)	523
BpuEI	CTTGAG	1 cut(s)	437
BpuMI	CCSGG	2 cut(s)	388, 865
BsaAI	YACGTR	1 cut(s)	702
BsaBI	GATNNNNATC	1 cut(s)	48
BsaHI	GRCGYC	2 cut(s)	279, 372
BsaI	GGTCTC	1 cut(s)	730
BsaJI	CCNNGG	3 cut(s)	202, 610, 805
BsaXI	ACNNNNNCTCC	2 cut(s)	524, 554
Bsc4I	CCNNNNNNNGG	6 cut(s)	208, 394, 642, 689, 817, 888
Bse1I	ACTGG	2 cut(s)	643, 922
Bse8I	GATNNNNATC	1 cut(s)	48
BseBI	CCWGG	2 cut(s)	611, 806
BseDI	CCNNGG	3 cut(s)	202, 610, 805
BseGI	GGATG	4 cut(s)	262, 632, 927, 952
BseJI	GATNNNNATC	1 cut(s)	48
BseLI	CCNNNNNNNGG	6 cut(s)	208, 394, 642, 689, 817, 888
BseMII	CTCAG	4 cut(s)	210, 423, 537, 933
BseNI	ACTGG	2 cut(s)	643, 922
BseRI	GAGGAG	1 cut(s)	77
BseSI	GKGCMC	3 cut(s)	27, 264, 734
BseX3I	CGGCCG	1 cut(s)	199
BseXI	GCAGC	5 cut(s)	83, 531, 605, 610, 794
Bsh1236I	CGCG	2 cut(s)	759, 772
Bsh1285I	CGRYCG	1 cut(s)	202
BshNI	GGYRCC	2 cut(s)	278, 371
BsiEI	CGRYCG	1 cut(s)	202
BsiHKAI	GWGCWC	2 cut(s)	27, 734
BsiSI	CCGG	4 cut(s)	198, 369, 388, 864
BslFI	GGGAC	1 cut(s)	241
BslI	CCNNNNNNNGG	6 cut(s)	208, 394, 642, 689, 817, 888
BsmAI	GTCTC	3 cut(s)	262, 332, 730
BsmBI	CGTCTC	2 cut(s)	262, 332
BsmFI	GGGAC	1 cut(s)	241
Bso31I	GGTCTC	1 cut(s)	730
Bsp120I	GGGCCC	1 cut(s)	260
Bsp1286I	GDGCHC	6 cut(s)	27, 264, 539, 558, 648, 734
Bsp143I	GATC	6 cut(s)	43, 130, 206, 312, 495, 834
BspCNI	CTCAG	4 cut(s)	211, 424, 536, 934
BspFNI	CGCG	2 cut(s)	759, 772
BspHI	TCATGA	1 cut(s)	648
BspLI	GGNNCC	7 cut(s)	45, 262, 263, 280, 373, 497, 557
BspOI	GCTAGC	1 cut(s)	461
BspPI	GGATC	5 cut(s)	38, 51, 214, 490, 503
BspQI	GCTCTTC	1 cut(s)	126
BspT107I	GGYRCC	2 cut(s)	278, 371
BspTNI	GGTCTC	1 cut(s)	730
BsrI	ACTGG	2 cut(s)	643, 922
BssECI	CCNNGG	3 cut(s)	202, 610, 805
BssMI	GATC	6 cut(s)	43, 130, 206, 312, 495, 834
BssNI	GRCGYC	2 cut(s)	279, 372
BssSI	CACGAG	1 cut(s)	727
Bst2BI	CACGAG	1 cut(s)	727
Bst2UI	CCWGG	2 cut(s)	611, 806
Bst4CI	ACNGT	3 cut(s)	232, 301, 586
Bst6I	CTCTTC	1 cut(s)	126
BstACI	GRCGYC	2 cut(s)	279, 372
BstBAI	YACGTR	1 cut(s)	702
BstC8I	GCNNGC	6 cut(s)	247, 321, 449, 459, 697, 901
BstDEI	CTNAG	4 cut(s)	219, 432, 523, 942
BstDSI	CCRYGG	1 cut(s)	202
BstENI	CCTNNNNNAGG	1 cut(s)	815
BstF5I	GGATG	4 cut(s)	262, 632, 927, 952
BstFNI	CGCG	2 cut(s)	759, 772
BstH2I	RGCGCY	4 cut(s)	36, 282, 375, 619
BstHHI	GCGC	6 cut(s)	35, 281, 374, 618, 623, 772
BstKTI	GATC	6 cut(s)	46, 133, 209, 315, 498, 837
BstMAI	GTCTC	3 cut(s)	262, 332, 730
BstMBI	GATC	6 cut(s)	43, 130, 206, 312, 495, 834
BstMCI	CGRYCG	1 cut(s)	202
BstMWI	GCNNNNNNNGC	2 cut(s)	467, 672
BstNI	CCWGG	2 cut(s)	611, 806
BstNSI	RCATGY	2 cut(s)	451, 903
BstSCI	CCNGG	4 cut(s)	386, 609, 804, 863
BstSFI	CTRYAG	1 cut(s)	812
BstSLI	GKGCMC	3 cut(s)	27, 264, 734
BstUI	CGCG	2 cut(s)	759, 772
BstV1I	GCAGC	5 cut(s)	83, 531, 605, 610, 794
BstV2I	GAAGAC	1 cut(s)	384
BstX2I	RGATCY	2 cut(s)	43, 495
BstXI	CCANNNNNNTGG	1 cut(s)	253
BstYI	RGATCY	2 cut(s)	43, 495
BstZI	CGGCCG	1 cut(s)	199
BtgI	CCRYGG	1 cut(s)	202
BtrI	CACGTC	1 cut(s)	326
BtsCI	GGATG	4 cut(s)	262, 632, 927, 952
BtsIMutI	CAGTG	3 cut(s)	216, 429, 636
Cac8I	GCNNGC	6 cut(s)	247, 321, 449, 459, 697, 901
CciI	TCATGA	1 cut(s)	648
CfoI	GCGC	6 cut(s)	35, 281, 374, 618, 623, 772
Cfr13I	GGNCC	6 cut(s)	211, 260, 261, 664, 802, 808
CseI	GACGC	1 cut(s)	53
Csp6I	GTAC	2 cut(s)	762, 915
CviAII	CATG	7 cut(s)	253, 334, 448, 547, 649, 900, 955
CviQI	GTAC	2 cut(s)	762, 915
DdeI	CTNAG	4 cut(s)	219, 432, 523, 942
DinI	GGCGCC	2 cut(s)	280, 373
DpnI	GATC	6 cut(s)	45, 132, 208, 314, 497, 836
DpnII	GATC	6 cut(s)	43, 130, 206, 312, 495, 834
EaeI	YGGCCR	2 cut(s)	199, 627
EagI	CGGCCG	1 cut(s)	199
Eam1104I	CTCTTC	1 cut(s)	126
EarI	CTCTTC	1 cut(s)	126
EclXI	CGGCCG	1 cut(s)	199
Eco24I	GRGCYC	4 cut(s)	264, 539, 558, 648
Eco31I	GGTCTC	1 cut(s)	730
Eco52I	CGGCCG	1 cut(s)	199
EcoNI	CCTNNNNNAGG	1 cut(s)	815
EcoO109I	RGGNCCY	2 cut(s)	261, 802
EcoRII	CCWGG	2 cut(s)	609, 804
EcoT38I	GRGCYC	4 cut(s)	264, 539, 558, 648
EgeI	GGCGCC	2 cut(s)	280, 373
EheI	GGCGCC	2 cut(s)	280, 373
Esp3I	CGTCTC	2 cut(s)	262, 332
FaeI	CATG	7 cut(s)	256, 337, 451, 550, 652, 903, 958
FaiI	YATR	9 cut(s)	254, 335, 449, 548, 573, 650, 705, 901, 956
FalI	AAGNNNNNCTT	2 cut(s)	831, 863
FaqI	GGGAC	1 cut(s)	241
FatI	CATG	7 cut(s)	252, 333, 447, 546, 648, 899, 954
FauI	CCCGC	3 cut(s)	700, 713, 896
FbaI	TGATCA	1 cut(s)	834
FokI	GGATG	4 cut(s)	269, 619, 934, 959
FriOI	GRGCYC	4 cut(s)	264, 539, 558, 648
FspBI	CTAG	1 cut(s)	458
GlaI	GCGC	6 cut(s)	34, 280, 373, 617, 622, 771
HaeII	RGCGCY	4 cut(s)	36, 282, 375, 619
HapII	CCGG	4 cut(s)	198, 369, 388, 864
HgaI	GACGC	1 cut(s)	53
HhaI	GCGC	6 cut(s)	35, 281, 374, 618, 623, 772
Hin1I	GRCGYC	2 cut(s)	279, 372
Hin1II	CATG	7 cut(s)	256, 337, 451, 550, 652, 903, 958
Hin6I	GCGC	6 cut(s)	33, 279, 372, 616, 621, 770
HinP1I	GCGC	6 cut(s)	33, 279, 372, 616, 621, 770
HinfI	GANTC	1 cut(s)	677
HpaII	CCGG	4 cut(s)	198, 369, 388, 864
HphI	GGTGA	2 cut(s)	672, 722
Hpy166II	GTNNAC	4 cut(s)	25, 604, 732, 826
Hpy188I	TCNGA	1 cut(s)	130
Hpy188III	TCNNGA	3 cut(s)	55, 68, 649
Hpy8I	GTNNAC	4 cut(s)	25, 604, 732, 826
Hpy99I	CGWCG	1 cut(s)	590
HpyAV	CCTTC	2 cut(s)	373, 853
HpyCH4III	ACNGT	3 cut(s)	232, 301, 586
HpyCH4IV	ACGT	2 cut(s)	325, 701
HpyCH4V	TGCA	5 cut(s)	25, 519, 544, 732, 938
HpyF10VI	GCNNNNNNNGC	2 cut(s)	467, 672
HpyF3I	CTNAG	4 cut(s)	219, 432, 523, 942
HpySE526I	ACGT	2 cut(s)	325, 701
Hsp92I	GRCGYC	2 cut(s)	279, 372
Hsp92II	CATG	7 cut(s)	256, 337, 451, 550, 652, 903, 958
HspAI	GCGC	6 cut(s)	33, 279, 372, 616, 621, 770
KasI	GGCGCC	2 cut(s)	278, 371
Ksp22I	TGATCA	1 cut(s)	834
Kzo9I	GATC	6 cut(s)	43, 130, 206, 312, 495, 834
LguI	GCTCTTC	1 cut(s)	126
LmnI	GCTCC	3 cut(s)	61, 561, 973
Lsp1109I	GCAGC	5 cut(s)	83, 531, 605, 610, 794
LweI	GCATC	3 cut(s)	120, 258, 263
MaeI	CTAG	1 cut(s)	458
MaeII	ACGT	2 cut(s)	325, 701
MaeIII	GTNAC	1 cut(s)	710
MalI	GATC	6 cut(s)	45, 132, 208, 314, 497, 836
MboI	GATC	6 cut(s)	43, 130, 206, 312, 495, 834
MboII	GAAGA	2 cut(s)	113, 389
MflI	RGATCY	2 cut(s)	43, 495
MhlI	GDGCHC	6 cut(s)	27, 264, 539, 558, 648, 734
MluCI	AATT	2 cut(s)	170, 910
Mly113I	GGCGCC	2 cut(s)	279, 372
MlyI	GAGTC	1 cut(s)	671
MmeI	TCCRAC	1 cut(s)	906
MseI	TTAA	2 cut(s)	303, 909
MslI	CAYNNNNRTG	1 cut(s)	566
MspA1I	CMGCKG	1 cut(s)	785
MspI	CCGG	4 cut(s)	198, 369, 388, 864
MspR9I	CCNGG	4 cut(s)	388, 611, 806, 865
MteI	GCGCNGCGC	1 cut(s)	619
MvaI	CCWGG	2 cut(s)	611, 806
MvnI	CGCG	2 cut(s)	759, 772
MwoI	GCNNNNNNNGC	2 cut(s)	467, 672
NarI	GGCGCC	2 cut(s)	279, 372
NciI	CCSGG	2 cut(s)	388, 865
NdeII	GATC	6 cut(s)	43, 130, 206, 312, 495, 834
NheI	GCTAGC	1 cut(s)	457
NlaIII	CATG	7 cut(s)	256, 337, 451, 550, 652, 903, 958
NlaIV	GGNNCC	7 cut(s)	45, 262, 263, 280, 373, 497, 557
NmeAIII	GCCGAG	1 cut(s)	87
NmuCI	GTSAC	1 cut(s)	710
NspI	RCATGY	2 cut(s)	451, 903
PaeI	GCATGC	2 cut(s)	451, 903
PagI	TCATGA	1 cut(s)	648
PciSI	GCTCTTC	1 cut(s)	126
PleI	GAGTC	1 cut(s)	671
PluTI	GGCGCC	2 cut(s)	282, 375
PpsI	GAGTC	1 cut(s)	671
Ppu21I	YACGTR	1 cut(s)	702
Psp6I	CCWGG	2 cut(s)	609, 804
PspGI	CCWGG	2 cut(s)	609, 804
PspN4I	GGNNCC	7 cut(s)	45, 262, 263, 280, 373, 497, 557
PspOMI	GGGCCC	1 cut(s)	260
PspPI	GGNCC	6 cut(s)	211, 260, 261, 664, 802, 808
PsuI	RGATCY	2 cut(s)	43, 495
PvuII	CAGCTG	1 cut(s)	785
RsaI	GTAC	2 cut(s)	763, 916
RsaNI	GTAC	2 cut(s)	762, 915
RseI	CAYNNNNRTG	1 cut(s)	566
SapI	GCTCTTC	1 cut(s)	126
SaqAI	TTAA	2 cut(s)	303, 909
Sau3AI	GATC	6 cut(s)	43, 130, 206, 312, 495, 834
Sau96I	GGNCC	6 cut(s)	211, 260, 261, 664, 802, 808
SchI	GAGTC	1 cut(s)	671
ScrFI	CCNGG	4 cut(s)	388, 611, 806, 865
SduI	GDGCHC	6 cut(s)	27, 264, 539, 558, 648, 734
SfaNI	GCATC	3 cut(s)	120, 258, 263
SfcI	CTRYAG	1 cut(s)	812
SfoI	GGCGCC	2 cut(s)	280, 373
SmiMI	CAYNNNNRTG	1 cut(s)	566
SmlI	CTYRAG	1 cut(s)	452
SmoI	CTYRAG	1 cut(s)	452
SphI	GCATGC	2 cut(s)	451, 903
Sse9I	AATT	2 cut(s)	170, 910
SspDI	GGCGCC	2 cut(s)	278, 371
SspI	AATATT	1 cut(s)	422
SspMI	CTAG	1 cut(s)	458
StyD4I	CCNGG	4 cut(s)	386, 609, 804, 863
TaaI	ACNGT	3 cut(s)	232, 301, 586
TaiI	ACGT	2 cut(s)	328, 704
TasI	AATT	2 cut(s)	170, 910
TatI	WGTACW	1 cut(s)	914
TauI	GCSGC	5 cut(s)	33, 140, 279, 629, 669
Tru1I	TTAA	2 cut(s)	303, 909
Tru9I	TTAA	2 cut(s)	303, 909
TscAI	CASTG	3 cut(s)	223, 436, 643
TseFI	GTSAC	1 cut(s)	710
TseI	GCWGC	5 cut(s)	96, 519, 618, 623, 782
Tsp45I	GTSAC	1 cut(s)	710
TspDTI	ATGAA	5 cut(s)	415, 432, 563, 665, 943
TspRI	CASTG	3 cut(s)	223, 436, 643
VneI	GTGCAC	2 cut(s)	23, 730
XagI	CCTNNNNNAGG	1 cut(s)	815
XceI	RCATGY	2 cut(s)	451, 903
XcmI	CCANNNNNNNNNTGG	1 cut(s)	55
XspI	CTAG	1 cut(s)	458

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.