FvH4_2g35900

Prolyl oligopeptidase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
26414377 .. 26417345
2969 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g35900.t1

Sequence Viewer

Length: 1275 bp
ATGCCCCACTCCCTCATCATCCCTCTTCCTCCGCAGCACCCCACTCTATCGTCACCATCCACCACCCTCCCGCACGTGCGACCTCCCCTGCCCCACACGTGGCAAGGTCCCTCCCCGCCAAAAATATTCCCCTATAAATACAGGTCCCTGTCTCGGTCGACCAGACACAGATCAAACACTGACACCCACATCACCCAAATGGCCGAGGAATCTGTCGACGCCCAGAAGCTTCGTTCCGAGTTTCACAAAGTGTTGACTAGCAGGCGATGTGGGCAAGTTCCGTTGACGGTGGAACAGGCGAAACCGGTGACTGAACCTCTGTTTCAGGAGGCTAGCCCTCCACGGTTCAGCCAGGCAATGAATGCGTGTCCCAAGGCTGACATTACCAACTTTAAGGAGAAGCTACAGGAGGAGAATCTTTACCTAATTACTGAGGCAGGAGAGCAGGGGAGGTTACCTGTGTTGATTTTGAGCATGAGGGAAGAAAGTAGTATCCAGAAAAGGCCTGCTGTTGTTTTTCTTCATAGTACTAACAAGAACAAAGAGTGGTTGAGACCATTGCTTGAGGCCTATGCTTCGAGGGGATATGTAGCGATTGCCATTGATTCTCGCTACCATGGTGAACGTGCCACCAATATAACCACTTATCAAGATGCTCTCATATCAGCGTGGAAAAGAGGCAATACAATGCCTTTCTTATTTGATACGGTCTGGGACTTGATAAAATTGGCAGATTATCTAACACAGAGGGAGGATGTGGATCCTGCTAGGCTAGGAATCACCGGTGAATCACTGGGAGGTATGCATGCATGGTTGGCTGCTGCTGCTGACACCCGCTATGCAGTGGTTGTCCCTATAATTGGCGTTCAGGGGTTTCGATGGGCAATAGACAATGATAAGTGGCAGGCTCGAGTTGACAGCATAAAACCTGTTTTTGAAGAAGCACGAATTGATCTAAACAAGAGTGCTATTGACAAAGAAGTAGTGGAGAAGGTGTGGGATAGAATTGCTCCAGGTCTGGCCTCCCAGTTTGATTCTCCTTATACAGTTCCAGCTATTGCACCACGTCCTCTATTGATTTTAAATGGTGCAGAAGATCCTCGATGTCCACTCGCTGGTCTGGATGTTCCCAAAGCGAGAGCACTCAAGGCTTATGAAGATGCACAGAGTGCAGATAAATTTAAGTTGATAGCAGAGCCTGGCATCGGCCACCAAATGACCGCTCTTATGGTAAAAGAGGCAAGCCACTGGTTTGATAAGTTTCTCAGGCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

425

Amino Acids

47.72

Weight (kDa)

8.76

Isoelectric Point (pI)

54.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AXE1 PF05448 139 - 286 2.9e-06 Acetyl xylan esterase (AXE1)
Abhydrolase_6 PF12697 171 - 408 1.7e-08 Alpha/beta hydrolase family
Peptidase_S9 PF00326 191 - 407 9.7e-10 Prolyl oligopeptidase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013568)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1115
AccBSI CCGCTC 1 cut(s) 1223
AccI GTMKAC 2 cut(s) 158, 216
AciI CCGC 6 cut(s) 32, 71, 116, 835, 1221, 1270
AclWI GGATC 3 cut(s) 755, 768, 1091
AcoI YGGCCR 2 cut(s) 201, 1207
AcsI RAATTY 1 cut(s) 1178
AcvI CACGTG 2 cut(s) 76, 99
AcyI GRCGYC 1 cut(s) 219
AdeI CACNNNGTG 2 cut(s) 250, 1169
AfaI GTAC 1 cut(s) 529
AfiI CCNNNNNNNGG 5 cut(s) 99, 153, 860, 1115, 1205
AflIII ACRYGT 1 cut(s) 96
AgeI ACCGGT 2 cut(s) 304, 782
AgsI TTSAA 1 cut(s) 938
AjiI CACGTC 1 cut(s) 1067
AjnI CCWGG 3 cut(s) 351, 1012, 1198
AluBI AGCT 3 cut(s) 229, 403, 1055
AluI AGCT 3 cut(s) 229, 403, 1055
Alw21I GWGCWC 1 cut(s) 1144
Alw26I GTCTC 2 cut(s) 156, 547
AlwI GGATC 3 cut(s) 755, 768, 1091
AlwNI CAGNNNCTG 1 cut(s) 1199
Ama87I CYCGRG 1 cut(s) 909
AoxI GGCC 5 cut(s) 201, 503, 567, 1020, 1207
ApeKI GCWGC 4 cut(s) 34, 818, 821, 824
ApoI RAATTY 1 cut(s) 1178
AsiGI ACCGGT 2 cut(s) 304, 782
AspS9I GGNCC 2 cut(s) 107, 144
AsuHPI GGTGA 6 cut(s) 45, 184, 319, 632, 772, 797
AsuNHI GCTAGC 1 cut(s) 332
AvaI CYCGRG 1 cut(s) 909
AvaII GGWCC 2 cut(s) 107, 144
BamHI GGATCC 1 cut(s) 760
BbrPI CACGTG 2 cut(s) 76, 99
Bbv12I GWGCWC 1 cut(s) 1144
BbvI GCAGC 4 cut(s) 46, 805, 808, 811
BccI CCATC 2 cut(s) 64, 873
BciT130I CCWGG 3 cut(s) 353, 1014, 1200
BciVI GTATCC 1 cut(s) 503
BcoDI GTCTC 2 cut(s) 156, 547
BfaI CTAG 4 cut(s) 258, 333, 768, 773
BfmI CTRYAG 1 cut(s) 404
BfuI GTATCC 1 cut(s) 503
BisI GCNGC 4 cut(s) 35, 819, 822, 825
BlsI GCNGC 4 cut(s) 36, 820, 823, 826
BmcAI AGTACT 1 cut(s) 529
Bme1390I CCNGG 3 cut(s) 353, 1014, 1200
Bme18I GGWCC 2 cut(s) 107, 144
BmeT110I CYCGRG 1 cut(s) 909
BmgBI CACGTC 1 cut(s) 1067
BmgT120I GGNCC 2 cut(s) 107, 144
BmiI GGNNCC 3 cut(s) 109, 146, 762
BmrFI CCNGG 3 cut(s) 353, 1014, 1200
BmrI ACTGGG 2 cut(s) 803, 1021
BmsI GCATC 3 cut(s) 643, 1150, 1212
BmtI GCTAGC 1 cut(s) 336
BmuI ACTGGG 2 cut(s) 803, 1021
BpmI CTGGAG 1 cut(s) 996
BpuEI CTTGAG 2 cut(s) 584, 1130
BsaAI YACGTR 2 cut(s) 76, 99
BsaBI GATNNNNATC 1 cut(s) 759
BsaHI GRCGYC 1 cut(s) 219
BsaI GGTCTC 1 cut(s) 547
BsaJI CCNNGG 4 cut(s) 204, 341, 372, 616
BsaWI WCCGGW 2 cut(s) 304, 782
BsaXI ACNNNNNCTCC 2 cut(s) 980, 1010
Bsc4I CCNNNNNNNGG 5 cut(s) 99, 153, 860, 1115, 1205
Bse118I RCCGGY 2 cut(s) 304, 782
Bse1I ACTGG 3 cut(s) 798, 1027, 1253
Bse3DI GCAATG 2 cut(s) 363, 557
Bse8I GATNNNNATC 1 cut(s) 759
BseBI CCWGG 3 cut(s) 353, 1014, 1200
BseDI CCNNGG 4 cut(s) 204, 341, 372, 616
BseGI GGATG 4 cut(s) 18, 56, 760, 1129
BseJI GATNNNNATC 1 cut(s) 759
BseLI CCNNNNNNNGG 5 cut(s) 99, 153, 860, 1115, 1205
BseMI GCAATG 2 cut(s) 363, 557
BseMII CTCAG 1 cut(s) 423
BseNI ACTGG 3 cut(s) 798, 1027, 1253
BseRI GAGGAG 1 cut(s) 425
BseXI GCAGC 4 cut(s) 46, 805, 808, 811
BsgI GTGCAG 2 cut(s) 1110, 1191
Bsh1285I CGRYCG 1 cut(s) 158
BshFI GGCC 5 cut(s) 203, 505, 569, 1022, 1209
BshTI ACCGGT 2 cut(s) 304, 782
BsiEI CGRYCG 1 cut(s) 158
BsiHKAI GWGCWC 1 cut(s) 1144
BsiHKCI CYCGRG 1 cut(s) 909
BsiSI CCGG 2 cut(s) 305, 783
BslFI GGGAC 5 cut(s) 93, 130, 354, 728, 836
BslI CCNNNNNNNGG 5 cut(s) 99, 153, 860, 1115, 1205
BsmAI GTCTC 2 cut(s) 156, 547
BsmFI GGGAC 5 cut(s) 93, 130, 354, 728, 836
BsmI GAATGC 1 cut(s) 367
BsnI GGCC 5 cut(s) 203, 505, 569, 1022, 1209
Bso31I GGTCTC 1 cut(s) 547
BsoBI CYCGRG 1 cut(s) 909
Bsp1286I GDGCHC 1 cut(s) 1144
Bsp143I GATC 4 cut(s) 170, 760, 952, 1096
Bsp19I CCATGG 1 cut(s) 616
BspACI CCGC 6 cut(s) 32, 71, 116, 835, 1221, 1270
BspANI GGCC 5 cut(s) 203, 505, 569, 1022, 1209
BspCNI CTCAG 1 cut(s) 424
BspLI GGNNCC 3 cut(s) 109, 146, 762
BspOI GCTAGC 1 cut(s) 336
BspPI GGATC 3 cut(s) 755, 768, 1091
BspTNI GGTCTC 1 cut(s) 547
BsrBI CCGCTC 1 cut(s) 1223
BsrDI GCAATG 2 cut(s) 363, 557
BsrFI RCCGGY 2 cut(s) 304, 782
BsrI ACTGG 3 cut(s) 798, 1027, 1253
BssAI RCCGGY 2 cut(s) 304, 782
BssECI CCNNGG 4 cut(s) 204, 341, 372, 616
BssMI GATC 4 cut(s) 170, 760, 952, 1096
BssNI GRCGYC 1 cut(s) 219
BssT1I CCWWGG 2 cut(s) 372, 616
Bst2UI CCWGG 3 cut(s) 353, 1014, 1200
Bst4CI ACNGT 4 cut(s) 289, 345, 709, 1048
Bst6I CTCTTC 1 cut(s) 30
BstACI GRCGYC 1 cut(s) 219
BstAPI GCANNNNNTGC 2 cut(s) 362, 1169
BstBAI YACGTR 2 cut(s) 76, 99
BstC8I GCNNGC 6 cut(s) 263, 334, 507, 807, 906, 1243
BstDEI CTNAG 2 cut(s) 432, 1265
BstDSI CCRYGG 2 cut(s) 341, 616
BstEII GGTNACC 1 cut(s) 453
BstF5I GGATG 4 cut(s) 18, 56, 760, 1129
BstKTI GATC 4 cut(s) 173, 763, 955, 1099
BstMAI GTCTC 2 cut(s) 156, 547
BstMBI GATC 4 cut(s) 170, 760, 952, 1096
BstMCI CGRYCG 1 cut(s) 158
BstMWI GCNNNNNNNGC 6 cut(s) 271, 362, 815, 824, 1148, 1169
BstNI CCWGG 3 cut(s) 353, 1014, 1200
BstNSI RCATGY 1 cut(s) 809
BstPI GGTNACC 1 cut(s) 453
BstSCI CCNGG 3 cut(s) 351, 1012, 1198
BstSFI CTRYAG 1 cut(s) 404
BstV1I GCAGC 4 cut(s) 46, 805, 808, 811
BstX2I RGATCY 2 cut(s) 760, 1096
BstYI RGATCY 2 cut(s) 760, 1096
BsuI GTATCC 1 cut(s) 503
BsuRI GGCC 5 cut(s) 203, 505, 569, 1022, 1209
BtgI CCRYGG 2 cut(s) 341, 616
BtgZI GCGATG 1 cut(s) 280
BtrI CACGTC 1 cut(s) 1067
BtsCI GGATG 4 cut(s) 18, 56, 760, 1129
BtsI GCAGTG 1 cut(s) 849
BtsIMutI CAGTG 4 cut(s) 177, 791, 849, 1246
Cac8I GCNNGC 6 cut(s) 263, 334, 507, 807, 906, 1243
CaiI CAGNNNCTG 1 cut(s) 1199
Cfr10I RCCGGY 2 cut(s) 304, 782
Cfr13I GGNCC 2 cut(s) 107, 144
CseI GACGC 1 cut(s) 227
Csp6I GTAC 1 cut(s) 528
CspAI ACCGGT 2 cut(s) 304, 782
CviAII CATG 4 cut(s) 475, 617, 806, 810
CviQI GTAC 1 cut(s) 528
DdeI CTNAG 2 cut(s) 432, 1265
DpnI GATC 4 cut(s) 172, 762, 954, 1098
DpnII GATC 4 cut(s) 170, 760, 952, 1096
DraI TTTAAA 1 cut(s) 1083
DraIII CACNNNGTG 2 cut(s) 250, 1169
EaeI YGGCCR 2 cut(s) 201, 1207
Eam1104I CTCTTC 1 cut(s) 30
EarI CTCTTC 1 cut(s) 30
Eco130I CCWWGG 2 cut(s) 372, 616
Eco147I AGGCCT 2 cut(s) 505, 569
Eco31I GGTCTC 1 cut(s) 547
Eco47I GGWCC 2 cut(s) 107, 144
Eco72I CACGTG 2 cut(s) 76, 99
Eco88I CYCGRG 1 cut(s) 909
Eco91I GGTNACC 1 cut(s) 453
EcoO109I RGGNCCY 2 cut(s) 107, 144
EcoO65I GGTNACC 1 cut(s) 453
EcoRII CCWGG 3 cut(s) 351, 1012, 1198
EcoT14I CCWWGG 2 cut(s) 372, 616
EcoT22I ATGCAT 2 cut(s) 807, 811
ErhI CCWWGG 2 cut(s) 372, 616
FaeI CATG 4 cut(s) 478, 620, 809, 813
FaqI GGGAC 5 cut(s) 93, 130, 354, 728, 836
FatI CATG 4 cut(s) 474, 616, 805, 809
FauI CCCGC 3 cut(s) 78, 123, 842
FblI GTMKAC 2 cut(s) 158, 216
Fnu4HI GCNGC 4 cut(s) 35, 819, 822, 825
FokI GGATG 4 cut(s) 5, 43, 767, 1136
Fsp4HI GCNGC 4 cut(s) 35, 819, 822, 825
FspBI CTAG 4 cut(s) 258, 333, 768, 773
GluI GCNGC 4 cut(s) 35, 819, 822, 825
GsuI CTGGAG 1 cut(s) 996
HaeIII GGCC 5 cut(s) 203, 505, 569, 1022, 1209
HapII CCGG 2 cut(s) 305, 783
HgaI GACGC 1 cut(s) 227
Hin1I GRCGYC 1 cut(s) 219
Hin1II CATG 4 cut(s) 478, 620, 809, 813
HincII GTYRAC 5 cut(s) 159, 217, 255, 285, 916
HindII GTYRAC 5 cut(s) 159, 217, 255, 285, 916
HindIII AAGCTT 1 cut(s) 227
HinfI GANTC 6 cut(s) 209, 415, 605, 777, 788, 1034
HpaII CCGG 2 cut(s) 305, 783
HphI GGTGA 6 cut(s) 45, 184, 319, 632, 772, 797
Hpy166II GTNNAC 7 cut(s) 159, 217, 255, 285, 623, 916, 1109
Hpy188I TCNGA 1 cut(s) 238
Hpy188III TCNNGA 4 cut(s) 326, 496, 650, 1121
Hpy8I GTNNAC 7 cut(s) 159, 217, 255, 285, 623, 916, 1109
Hpy99I CGWCG 1 cut(s) 221
HpyAV CCTTC 1 cut(s) 985
HpyCH4III ACNGT 4 cut(s) 289, 345, 709, 1048
HpyCH4IV ACGT 4 cut(s) 75, 98, 625, 1066
HpyCH4V TGCA 7 cut(s) 805, 809, 842, 1061, 1091, 1163, 1172
HpyF10VI GCNNNNNNNGC 6 cut(s) 271, 362, 815, 824, 1148, 1169
HpyF3I CTNAG 2 cut(s) 432, 1265
HpySE526I ACGT 4 cut(s) 75, 98, 625, 1066
Hsp92I GRCGYC 1 cut(s) 219
Hsp92II CATG 4 cut(s) 478, 620, 809, 813
Kzo9I GATC 4 cut(s) 170, 760, 952, 1096
LmnI GCTCC 1 cut(s) 1015
Lsp1109I GCAGC 4 cut(s) 46, 805, 808, 811
LweI GCATC 3 cut(s) 643, 1150, 1212
MaeI CTAG 4 cut(s) 258, 333, 768, 773
MaeII ACGT 4 cut(s) 75, 98, 625, 1066
MaeIII GTNAC 3 cut(s) 51, 307, 453
MalI GATC 4 cut(s) 172, 762, 954, 1098
MbiI CCGCTC 1 cut(s) 1223
MboI GATC 4 cut(s) 170, 760, 952, 1096
MboII GAAGA 6 cut(s) 17, 494, 512, 950, 1106, 1169
MflI RGATCY 2 cut(s) 760, 1096
MhlI GDGCHC 1 cut(s) 1144
MluCI AATT 6 cut(s) 426, 725, 858, 948, 1005, 1178
Mph1103I ATGCAT 2 cut(s) 807, 811
MseI TTAA 3 cut(s) 393, 1082, 1182
MslI CAYNNNNRTG 1 cut(s) 197
MspI CCGG 2 cut(s) 305, 783
MspR9I CCNGG 3 cut(s) 353, 1014, 1200
Mva1269I GAATGC 1 cut(s) 367
MvaI CCWGG 3 cut(s) 353, 1014, 1200
MwoI GCNNNNNNNGC 6 cut(s) 271, 362, 815, 824, 1148, 1169
NcoI CCATGG 1 cut(s) 616
NdeII GATC 4 cut(s) 170, 760, 952, 1096
NheI GCTAGC 1 cut(s) 332
NlaIII CATG 4 cut(s) 478, 620, 809, 813
NlaIV GGNNCC 3 cut(s) 109, 146, 762
NmeAIII GCCGAG 1 cut(s) 229
NmuCI GTSAC 2 cut(s) 51, 307
NsiI ATGCAT 2 cut(s) 807, 811
NspI RCATGY 1 cut(s) 809
PaeI GCATGC 1 cut(s) 809
PaeR7I CTCGAG 1 cut(s) 909
PceI AGGCCT 2 cut(s) 505, 569
PctI GAATGC 1 cut(s) 367
PfeI GAWTC 6 cut(s) 209, 415, 605, 777, 788, 1034
PflMI CCANNNNNTGG 1 cut(s) 1115
PinAI ACCGGT 2 cut(s) 304, 782
PkrI GCNGC 4 cut(s) 36, 820, 823, 826
PmaCI CACGTG 2 cut(s) 76, 99
PmlI CACGTG 2 cut(s) 76, 99
Ppu21I YACGTR 2 cut(s) 76, 99
PpuMI RGGWCCY 2 cut(s) 107, 144
Psp5II RGGWCCY 2 cut(s) 107, 144
Psp6I CCWGG 3 cut(s) 351, 1012, 1198
PspCI CACGTG 2 cut(s) 76, 99
PspEI GGTNACC 1 cut(s) 453
PspGI CCWGG 3 cut(s) 351, 1012, 1198
PspN4I GGNNCC 3 cut(s) 109, 146, 762
PspPI GGNCC 2 cut(s) 107, 144
PspPPI RGGWCCY 2 cut(s) 107, 144
PspXI VCTCGAGB 1 cut(s) 909
PstNI CAGNNNCTG 1 cut(s) 1199
PsuI RGATCY 2 cut(s) 760, 1096
RsaI GTAC 1 cut(s) 529
RsaNI GTAC 1 cut(s) 528
RseI CAYNNNNRTG 1 cut(s) 197
SalI GTCGAC 2 cut(s) 157, 215
SaqAI TTAA 3 cut(s) 393, 1082, 1182
SatI GCNGC 4 cut(s) 35, 819, 822, 825
Sau3AI GATC 4 cut(s) 170, 760, 952, 1096
Sau96I GGNCC 2 cut(s) 107, 144
ScaI AGTACT 1 cut(s) 529
ScrFI CCNGG 3 cut(s) 353, 1014, 1200
SduI GDGCHC 1 cut(s) 1144
SfaNI GCATC 3 cut(s) 643, 1150, 1212
SfcI CTRYAG 1 cut(s) 404
Sfr274I CTCGAG 1 cut(s) 909
SgrAI CRCCGGYG 1 cut(s) 782
SinI GGWCC 2 cut(s) 107, 144
SlaI CTCGAG 1 cut(s) 909
SmiMI CAYNNNNRTG 1 cut(s) 197
SmlI CTYRAG 3 cut(s) 563, 909, 1145
SmoI CTYRAG 3 cut(s) 563, 909, 1145
SphI GCATGC 1 cut(s) 809
Sse9I AATT 6 cut(s) 426, 725, 858, 948, 1005, 1178
SseBI AGGCCT 2 cut(s) 505, 569
SsiI CCGC 6 cut(s) 32, 71, 116, 835, 1221, 1270
SspI AATATT 1 cut(s) 126
SspMI CTAG 4 cut(s) 258, 333, 768, 773
StuI AGGCCT 2 cut(s) 505, 569
StyD4I CCNGG 3 cut(s) 351, 1012, 1198
StyI CCWWGG 2 cut(s) 372, 616
TaaI ACNGT 4 cut(s) 289, 345, 709, 1048
TaiI ACGT 4 cut(s) 78, 101, 628, 1069
TaqI TCGA 6 cut(s) 158, 216, 578, 877, 910, 1102
TaqII GACCGA 1 cut(s) 144
TasI AATT 6 cut(s) 426, 725, 858, 948, 1005, 1178
TatI WGTACW 1 cut(s) 527
TfiI GAWTC 6 cut(s) 209, 415, 605, 777, 788, 1034
Tru1I TTAA 3 cut(s) 393, 1082, 1182
Tru9I TTAA 3 cut(s) 393, 1082, 1182
TscAI CASTG 4 cut(s) 184, 798, 849, 1253
TseFI GTSAC 2 cut(s) 51, 307
TseI GCWGC 4 cut(s) 34, 818, 821, 824
Tsp45I GTSAC 2 cut(s) 51, 307
TspDTI ATGAA 3 cut(s) 374, 512, 1170
TspGWI ACGGA 1 cut(s) 270
TspRI CASTG 4 cut(s) 184, 798, 849, 1253
Van91I CCANNNNNTGG 1 cut(s) 1115
VpaK11BI GGWCC 2 cut(s) 107, 144
XapI RAATTY 1 cut(s) 1178
XceI RCATGY 1 cut(s) 809
XhoI CTCGAG 1 cut(s) 909
XmiI GTMKAC 2 cut(s) 158, 216
XspI CTAG 4 cut(s) 258, 333, 768, 773
ZrmI AGTACT 1 cut(s) 529
Zsp2I ATGCAT 2 cut(s) 807, 811
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.