Prupe.1G451100_v2.0.a1

Prolyl oligopeptidase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
37996219 .. 38000983
4765 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G451100.1

Sequence Viewer

Length: 1383 bp
ATGATCAAACCATCGCCACCCAAAAAGGCCCTCATAATTTGTATTTATTACTTTATCGTGCCATTGTATGGAAAACACATCATCATGCATCGCTCTCTCCTTAATGCTCACCAACAACCACTAAGCTTCACTCTCTCATCCCGCAACTCCAATTCGCCAAGCACCGTACACTCACACGTGGCACAAACTATGGCGCACACTTGTCCACGATCGCTACCTACCTCTGCGGAAAAACTGTCCTATAAATACCGGTCGTCGTCCCAGACCAGAAGCGTATCCGATTCCACTGAGACTGCAATGAGCCCAGCAATGGAGGAAGCTCTCGACGACGCCCAGAAGCTTCGGGATGAGTTCCTGAAAGTCCTGCGTAGCAGACGATCGGGCGAAGTTCCGTTATCGGTTGAACCGGCAAAACCAGTGTCTCATCCATTGTTTCAGGAAGCTTCTCCGCCAACTTTCAGTGAGGCAATGAACGCTTGTCCCAAGGCCAACATCCCCAATTTTAAGGATAAGCTACACGAGGAAAACCTTTACTTAATTACTGAGGAAGGAGAGCAAGGGCGGTTACCCGTGTGGATTTTAAGCATGAAGGAAAACAATACCCAGAAAAGGCCTGCTGTTGTTTTTCTGCACAGTACAAACAAAAACAAAGAGTGGTTAAGACCATTGCTTGAGGCATATGCTTCAAGGGAATATGTAGCAATTGCCATTGATTCTCGCTACCATGGTGAACGTGCCAGCAATATATCCACTTACCGAGATGCTCTCATATCATCGTGGAAAAAGGGTGATACAATGCCATTCTTATTTGATACGACCTGGGACTTGATAAAATTGGCAGATTATCTAACACAGAGGGAGGATGTAGACCCTACTAGGATAGGAATCACTGGTGAATCACTTGGAGGTATGCATGCATGGTTTGCTGCTGCTGCTGATACCCGCTATGCAGTAGTGGTCCCTATTATTGGTGTTCAGGGGTTTCGATGGGCCATAGACAATGATAAGTGGCAGGCTCGAGTTGACAGTATAAAACCTGTCTTTGAGGCAGCACGAATTGATCTCGGGAAGACTTCGATTGACAAAGAAGTTGTGGAGAAGGTCTGGGATAGGATTGCTCCTGGTCTAGCCTCCAAGTTTGATTCTCCTTACACAATTCCTGCTATTGCACCACGCCCTCTGTTGATTGTGAATGGTGAGGAAGATCCTCGATGTCCACTTGCTGGTCTGGAAATCCCCAAGTCAAGAGCATGCAAGGCTTATGAAGATGCGCAGAGTATACATAACTTCAAGTTGATAGCAGAGCCGGGCATCGGCCACCAAATGACTGCGTTTATGGTAAAAGAAGCCAGCTACTGGTTTGACCAATTTCTCATGCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

461

Amino Acids

51.79

Weight (kDa)

7.69

Isoelectric Point (pI)

52.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013568)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1272
AccB7I CCANNNNNTGG 3 cut(s) 68, 1223, 1356
AccI GTMKAC 2 cut(s) 867, 1279
AciI CCGC 5 cut(s) 142, 227, 449, 562, 943
AclWI GGATC 1 cut(s) 1199
AcoI YGGCCR 1 cut(s) 1315
AcvI CACGTG 1 cut(s) 178
AcyI GRCGYC 1 cut(s) 330
AfaI GTAC 2 cut(s) 168, 637
AfiI CCNNNNNNNGG 7 cut(s) 68, 310, 609, 968, 1223, 1313, 1356
AflIII ACRYGT 1 cut(s) 175
AgeI ACCGGT 1 cut(s) 249
AgsI TTSAA 3 cut(s) 404, 687, 1291
AjnI CCWGG 2 cut(s) 818, 1120
AluBI AGCT 6 cut(s) 126, 320, 340, 443, 514, 1353
AluI AGCT 6 cut(s) 126, 320, 340, 443, 514, 1353
Alw26I GTCTC 2 cut(s) 284, 426
AlwI GGATC 1 cut(s) 1199
AlwNI CAGNNNCTG 1 cut(s) 1356
Ama87I CYCGRG 2 cut(s) 1017, 1064
AoxI GGCC 5 cut(s) 27, 486, 611, 990, 1315
ApeKI GCWGC 4 cut(s) 926, 929, 932, 1049
ArsI GACNNNNNNTTYG 2 cut(s) 404, 436
AsiGI ACCGGT 1 cut(s) 249
AspLEI GCGC 2 cut(s) 196, 1273
AspS9I GGNCC 3 cut(s) 28, 958, 990
AsuC2I CCSGG 1 cut(s) 1308
AsuHPI GGTGA 5 cut(s) 101, 740, 800, 905, 1208
AvaI CYCGRG 2 cut(s) 1017, 1064
AvaII GGWCC 1 cut(s) 958
BanII GRGCYC 1 cut(s) 305
BauI CACGAG 1 cut(s) 518
BbrPI CACGTG 1 cut(s) 178
BbsI GAAGAC 1 cut(s) 1076
BbvI GCAGC 4 cut(s) 913, 916, 919, 1061
BccI CCATC 2 cut(s) 19, 981
BceAI ACGGC 1 cut(s) 1363
BciT130I CCWGG 2 cut(s) 820, 1122
BciVI GTATCC 1 cut(s) 286
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 1308
BcoDI GTCTC 2 cut(s) 284, 426
BfaI CTAG 2 cut(s) 876, 1127
BfuI GTATCC 1 cut(s) 286
BisI GCNGC 4 cut(s) 927, 930, 933, 1050
BlsI GCNGC 4 cut(s) 928, 931, 934, 1051
Bme1390I CCNGG 3 cut(s) 820, 1122, 1308
Bme18I GGWCC 1 cut(s) 958
BmeT110I CYCGRG 2 cut(s) 1017, 1064
BmgT120I GGNCC 3 cut(s) 28, 958, 990
BmiI GGNNCC 1 cut(s) 960
BmrFI CCNGG 3 cut(s) 820, 1122, 1308
BmsI GCATC 4 cut(s) 97, 751, 1258, 1320
BpiI GAAGAC 1 cut(s) 1076
BplI GAGNNNNNCTC 2 cut(s) 750, 782
BpuEI CTTGAG 1 cut(s) 692
BpuMI CCSGG 1 cut(s) 1308
BsaAI YACGTR 1 cut(s) 178
BsaBI GATNNNNATC 1 cut(s) 884
BsaHI GRCGYC 1 cut(s) 330
BsaJI CCNNGG 3 cut(s) 483, 724, 819
BsaWI WCCGGW 1 cut(s) 249
Bsc4I CCNNNNNNNGG 7 cut(s) 68, 310, 609, 968, 1223, 1313, 1356
Bse118I RCCGGY 2 cut(s) 249, 406
Bse1I ACTGG 3 cut(s) 416, 895, 1361
Bse3DI GCAATG 4 cut(s) 303, 315, 474, 665
Bse8I GATNNNNATC 1 cut(s) 884
BseBI CCWGG 2 cut(s) 820, 1122
BseDI CCNNGG 3 cut(s) 483, 724, 819
BseGI GGATG 5 cut(s) 137, 352, 424, 492, 868
BseJI GATNNNNATC 1 cut(s) 884
BseLI CCNNNNNNNGG 7 cut(s) 68, 310, 609, 968, 1223, 1313, 1356
BseMI GCAATG 4 cut(s) 303, 315, 474, 665
BseMII CTCAG 2 cut(s) 279, 534
BseNI ACTGG 3 cut(s) 416, 895, 1361
BseXI GCAGC 4 cut(s) 913, 916, 919, 1061
BseYI CCCAGC 1 cut(s) 304
BsgI GTGCAG 1 cut(s) 614
Bsh1285I CGRYCG 3 cut(s) 212, 254, 380
BshFI GGCC 5 cut(s) 29, 488, 613, 992, 1317
BshTI ACCGGT 1 cut(s) 249
BsiEI CGRYCG 3 cut(s) 212, 254, 380
BsiHKCI CYCGRG 2 cut(s) 1017, 1064
BsiSI CCGG 3 cut(s) 250, 407, 1307
BslFI GGGAC 4 cut(s) 244, 465, 836, 944
BslI CCNNNNNNNGG 7 cut(s) 68, 310, 609, 968, 1223, 1313, 1356
BsmAI GTCTC 2 cut(s) 284, 426
BsmFI GGGAC 4 cut(s) 244, 465, 836, 944
BsnI GGCC 5 cut(s) 29, 488, 613, 992, 1317
BsoBI CYCGRG 2 cut(s) 1017, 1064
Bsp1286I GDGCHC 1 cut(s) 305
Bsp143I GATC 5 cut(s) 3, 209, 377, 1060, 1204
Bsp19I CCATGG 1 cut(s) 724
BspACI CCGC 5 cut(s) 142, 227, 449, 562, 943
BspANI GGCC 5 cut(s) 29, 488, 613, 992, 1317
BspCNI CTCAG 2 cut(s) 280, 535
BspLI GGNNCC 1 cut(s) 960
BspPI GGATC 1 cut(s) 1199
BsrDI GCAATG 4 cut(s) 303, 315, 474, 665
BsrFI RCCGGY 2 cut(s) 249, 406
BsrI ACTGG 3 cut(s) 416, 895, 1361
BssAI RCCGGY 2 cut(s) 249, 406
BssECI CCNNGG 3 cut(s) 483, 724, 819
BssMI GATC 5 cut(s) 3, 209, 377, 1060, 1204
BssNAI GTATAC 1 cut(s) 1280
BssNI GRCGYC 1 cut(s) 330
BssSI CACGAG 1 cut(s) 518
BssT1I CCWWGG 2 cut(s) 483, 724
Bst1107I GTATAC 1 cut(s) 1280
Bst2BI CACGAG 1 cut(s) 518
Bst2UI CCWGG 2 cut(s) 820, 1122
Bst4CI ACNGT 4 cut(s) 166, 237, 635, 1028
BstACI GRCGYC 1 cut(s) 330
BstAPI GCANNNNNTGC 1 cut(s) 923
BstBAI YACGTR 1 cut(s) 178
BstC8I GCNNGC 6 cut(s) 615, 739, 915, 1014, 1252, 1351
BstDEI CTNAG 3 cut(s) 122, 288, 543
BstDSI CCRYGG 1 cut(s) 724
BstEII GGTNACC 1 cut(s) 564
BstF5I GGATG 5 cut(s) 137, 352, 424, 492, 868
BstHHI GCGC 2 cut(s) 196, 1273
BstKTI GATC 5 cut(s) 6, 212, 380, 1063, 1207
BstMAI GTCTC 2 cut(s) 284, 426
BstMBI GATC 5 cut(s) 3, 209, 377, 1060, 1204
BstMCI CGRYCG 3 cut(s) 212, 254, 380
BstMWI GCNNNNNNNGC 4 cut(s) 473, 923, 932, 1256
BstNI CCWGG 2 cut(s) 820, 1122
BstNSI RCATGY 2 cut(s) 917, 1254
BstPI GGTNACC 1 cut(s) 564
BstSCI CCNGG 3 cut(s) 818, 1120, 1306
BstV1I GCAGC 4 cut(s) 913, 916, 919, 1061
BstV2I GAAGAC 1 cut(s) 1076
BstX2I RGATCY 1 cut(s) 1204
BstYI RGATCY 1 cut(s) 1204
BstZ17I GTATAC 1 cut(s) 1280
BsuI GTATCC 1 cut(s) 286
BsuRI GGCC 5 cut(s) 29, 488, 613, 992, 1317
BtgI CCRYGG 1 cut(s) 724
BtgZI GCGATG 1 cut(s) 74
BtsCI GGATG 5 cut(s) 137, 352, 424, 492, 868
BtsIMutI CAGTG 4 cut(s) 285, 423, 466, 888
Cac8I GCNNGC 6 cut(s) 615, 739, 915, 1014, 1252, 1351
CaiI CAGNNNCTG 1 cut(s) 1356
CfoI GCGC 2 cut(s) 196, 1273
Cfr10I RCCGGY 2 cut(s) 249, 406
Cfr13I GGNCC 3 cut(s) 28, 958, 990
CseI GACGC 1 cut(s) 338
Csp6I GTAC 2 cut(s) 167, 636
CspAI ACCGGT 1 cut(s) 249
CviAII CATG 7 cut(s) 85, 586, 725, 914, 918, 1251, 1375
CviQI GTAC 2 cut(s) 167, 636
DdeI CTNAG 3 cut(s) 122, 288, 543
DpnI GATC 5 cut(s) 5, 211, 379, 1062, 1206
DpnII GATC 5 cut(s) 3, 209, 377, 1060, 1204
EaeI YGGCCR 1 cut(s) 1315
EciI GGCGGA 1 cut(s) 438
Eco130I CCWWGG 2 cut(s) 483, 724
Eco147I AGGCCT 1 cut(s) 613
Eco24I GRGCYC 1 cut(s) 305
Eco47I GGWCC 1 cut(s) 958
Eco72I CACGTG 1 cut(s) 178
Eco88I CYCGRG 2 cut(s) 1017, 1064
Eco91I GGTNACC 1 cut(s) 564
EcoO109I RGGNCCY 1 cut(s) 28
EcoO65I GGTNACC 1 cut(s) 564
EcoRII CCWGG 2 cut(s) 818, 1120
EcoT14I CCWWGG 2 cut(s) 483, 724
EcoT22I ATGCAT 3 cut(s) 90, 915, 919
EcoT38I GRGCYC 1 cut(s) 305
ErhI CCWWGG 2 cut(s) 483, 724
FaeI CATG 7 cut(s) 88, 589, 728, 917, 921, 1254, 1378
FaqI GGGAC 4 cut(s) 244, 465, 836, 944
FatI CATG 7 cut(s) 84, 585, 724, 913, 917, 1250, 1374
FauI CCCGC 2 cut(s) 149, 950
FauNDI CATATG 1 cut(s) 679
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 2 cut(s) 867, 1279
Fnu4HI GCNGC 4 cut(s) 927, 930, 933, 1050
FokI GGATG 5 cut(s) 124, 359, 411, 479, 875
FriOI GRGCYC 1 cut(s) 305
Fsp4HI GCNGC 4 cut(s) 927, 930, 933, 1050
FspBI CTAG 2 cut(s) 876, 1127
FspI TGCGCA 1 cut(s) 1272
GlaI GCGC 2 cut(s) 195, 1272
GluI GCNGC 4 cut(s) 927, 930, 933, 1050
GsaI CCCAGC 1 cut(s) 308
HaeIII GGCC 5 cut(s) 29, 488, 613, 992, 1317
HapII CCGG 3 cut(s) 250, 407, 1307
HgaI GACGC 1 cut(s) 338
HhaI GCGC 2 cut(s) 196, 1273
Hin1I GRCGYC 1 cut(s) 330
Hin1II CATG 7 cut(s) 88, 589, 728, 917, 921, 1254, 1378
Hin6I GCGC 2 cut(s) 194, 1271
HinP1I GCGC 2 cut(s) 194, 1271
HincII GTYRAC 1 cut(s) 1024
HindII GTYRAC 1 cut(s) 1024
HindIII AAGCTT 3 cut(s) 124, 338, 441
HinfI GANTC 5 cut(s) 281, 713, 885, 896, 1142
HpaII CCGG 3 cut(s) 250, 407, 1307
HphI GGTGA 5 cut(s) 101, 740, 800, 905, 1208
Hpy166II GTNNAC 7 cut(s) 169, 206, 731, 868, 1024, 1217, 1280
Hpy188I TCNGA 1 cut(s) 280
Hpy188III TCNNGA 7 cut(s) 323, 344, 355, 437, 1066, 1229, 1245
Hpy8I GTNNAC 7 cut(s) 169, 206, 731, 868, 1024, 1217, 1280
Hpy99I CGWCG 3 cut(s) 259, 329, 332
HpyAV CCTTC 3 cut(s) 542, 583, 1093
HpyCH4III ACNGT 4 cut(s) 166, 237, 635, 1028
HpyCH4IV ACGT 2 cut(s) 177, 733
HpyCH4V TGCA 8 cut(s) 88, 296, 631, 913, 917, 950, 1169, 1254
HpyF10VI GCNNNNNNNGC 4 cut(s) 473, 923, 932, 1256
HpyF3I CTNAG 3 cut(s) 122, 288, 543
HpySE526I ACGT 2 cut(s) 177, 733
Hsp92I GRCGYC 1 cut(s) 330
Hsp92II CATG 7 cut(s) 88, 589, 728, 917, 921, 1254, 1378
HspAI GCGC 2 cut(s) 194, 1271
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 5 cut(s) 3, 209, 377, 1060, 1204
LmnI GCTCC 1 cut(s) 1123
Lsp1109I GCAGC 4 cut(s) 913, 916, 919, 1061
LweI GCATC 4 cut(s) 97, 751, 1258, 1320
MaeI CTAG 2 cut(s) 876, 1127
MaeII ACGT 2 cut(s) 177, 733
MaeIII GTNAC 1 cut(s) 564
MalI GATC 5 cut(s) 5, 211, 379, 1062, 1206
MboI GATC 5 cut(s) 3, 209, 377, 1060, 1204
MboII GAAGA 3 cut(s) 1081, 1214, 1277
MfeI CAATTG 1 cut(s) 702
MflI RGATCY 1 cut(s) 1204
MhlI GDGCHC 1 cut(s) 305
MluCI AATT 9 cut(s) 36, 151, 499, 537, 702, 833, 1056, 1155, 1367
Mph1103I ATGCAT 3 cut(s) 90, 915, 919
MseI TTAA 5 cut(s) 102, 504, 536, 581, 659
MslI CAYNNNNRTG 1 cut(s) 83
MspI CCGG 3 cut(s) 250, 407, 1307
MspR9I CCNGG 3 cut(s) 820, 1122, 1308
MunI CAATTG 1 cut(s) 702
MvaI CCWGG 2 cut(s) 820, 1122
MwoI GCNNNNNNNGC 4 cut(s) 473, 923, 932, 1256
NciI CCSGG 1 cut(s) 1308
NcoI CCATGG 1 cut(s) 724
NdeI CATATG 1 cut(s) 679
NdeII GATC 5 cut(s) 3, 209, 377, 1060, 1204
NlaIII CATG 7 cut(s) 88, 589, 728, 917, 921, 1254, 1378
NlaIV GGNNCC 1 cut(s) 960
NsbI TGCGCA 1 cut(s) 1272
NsiI ATGCAT 3 cut(s) 90, 915, 919
NspI RCATGY 2 cut(s) 917, 1254
PaeI GCATGC 2 cut(s) 917, 1254
PaeR7I CTCGAG 1 cut(s) 1017
PceI AGGCCT 1 cut(s) 613
PfeI GAWTC 5 cut(s) 281, 713, 885, 896, 1142
PflMI CCANNNNNTGG 3 cut(s) 68, 1223, 1356
PinAI ACCGGT 1 cut(s) 249
PkrI GCNGC 4 cut(s) 928, 931, 934, 1051
Ple19I CGATCG 2 cut(s) 212, 380
PmaCI CACGTG 1 cut(s) 178
PmlI CACGTG 1 cut(s) 178
Ppu21I YACGTR 1 cut(s) 178
Psp6I CCWGG 2 cut(s) 818, 1120
PspCI CACGTG 1 cut(s) 178
PspEI GGTNACC 1 cut(s) 564
PspFI CCCAGC 1 cut(s) 304
PspGI CCWGG 2 cut(s) 818, 1120
PspN4I GGNNCC 1 cut(s) 960
PspPI GGNCC 3 cut(s) 28, 958, 990
PspXI VCTCGAGB 1 cut(s) 1017
PstNI CAGNNNCTG 1 cut(s) 1356
PsuI RGATCY 1 cut(s) 1204
PvuI CGATCG 2 cut(s) 212, 380
RsaI GTAC 2 cut(s) 168, 637
RsaNI GTAC 2 cut(s) 167, 636
RseI CAYNNNNRTG 1 cut(s) 83
SaqAI TTAA 5 cut(s) 102, 504, 536, 581, 659
SatI GCNGC 4 cut(s) 927, 930, 933, 1050
Sau3AI GATC 5 cut(s) 3, 209, 377, 1060, 1204
Sau96I GGNCC 3 cut(s) 28, 958, 990
ScrFI CCNGG 3 cut(s) 820, 1122, 1308
SduI GDGCHC 1 cut(s) 305
SfaNI GCATC 4 cut(s) 97, 751, 1258, 1320
Sfr274I CTCGAG 1 cut(s) 1017
SinI GGWCC 1 cut(s) 958
SlaI CTCGAG 1 cut(s) 1017
SmiMI CAYNNNNRTG 1 cut(s) 83
SmlI CTYRAG 2 cut(s) 671, 1017
SmoI CTYRAG 2 cut(s) 671, 1017
SphI GCATGC 2 cut(s) 917, 1254
Sse9I AATT 9 cut(s) 36, 151, 499, 537, 702, 833, 1056, 1155, 1367
SseBI AGGCCT 1 cut(s) 613
SsiI CCGC 5 cut(s) 142, 227, 449, 562, 943
SspMI CTAG 2 cut(s) 876, 1127
StuI AGGCCT 1 cut(s) 613
StyD4I CCNGG 3 cut(s) 818, 1120, 1306
StyI CCWWGG 2 cut(s) 483, 724
TaaI ACNGT 4 cut(s) 166, 237, 635, 1028
TaiI ACGT 2 cut(s) 180, 736
TaqI TCGA 5 cut(s) 324, 985, 1018, 1076, 1210
TasI AATT 9 cut(s) 36, 151, 499, 537, 702, 833, 1056, 1155, 1367
TatI WGTACW 1 cut(s) 635
TfiI GAWTC 5 cut(s) 281, 713, 885, 896, 1142
Tru1I TTAA 5 cut(s) 102, 504, 536, 581, 659
Tru9I TTAA 5 cut(s) 102, 504, 536, 581, 659
TscAI CASTG 4 cut(s) 292, 423, 466, 895
TseI GCWGC 4 cut(s) 926, 929, 932, 1049
TspDTI ATGAA 3 cut(s) 485, 602, 1278
TspGWI ACGGA 1 cut(s) 381
TspRI CASTG 4 cut(s) 292, 423, 466, 895
Van91I CCANNNNNTGG 3 cut(s) 68, 1223, 1356
VpaK11BI GGWCC 1 cut(s) 958
XceI RCATGY 2 cut(s) 917, 1254
XhoI CTCGAG 1 cut(s) 1017
XmiI GTMKAC 2 cut(s) 867, 1279
XspI CTAG 2 cut(s) 876, 1127
Zsp2I ATGCAT 3 cut(s) 90, 915, 919
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.