EF-hand domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g36371 |
| malus_domestica | MD08G1123200.v1.1 MD15G1102200.v1.1 |
| prunus_persica | Prupe.1G455200_v2.0.a1 |
| pyrus_communis | pycom15g09340 |
| rosa_laevigata | RLG00000010883 |
| rosa_multiflora | Rmu_sc0001809.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00162730 |
| rosa_rugosa | Rorug06G0340900 |
| rosa_samantha | Rh6AG453100 Rh6BG448700 Rh6CG466800 Rh6DG453500 |
| rosa_wichuraiana | Rw6G039480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 5 |
| AclWI | GGATC | 1 cut(s) | 122 |
| AcsI | RAATTY | 1 cut(s) | 577 |
| AgsI | TTSAA | 5 cut(s) | 103, 440, 448, 496, 577 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 381, 413, 488, 520 |
| AleI | CACNNNNGTG | 2 cut(s) | 122, 191 |
| Alw21I | GWGCWC | 2 cut(s) | 182, 198 |
| Alw44I | GTGCAC | 1 cut(s) | 194 |
| AlwI | GGATC | 1 cut(s) | 122 |
| ApaLI | GTGCAC | 1 cut(s) | 194 |
| ApeKI | GCWGC | 2 cut(s) | 217, 433 |
| ApoI | RAATTY | 1 cut(s) | 577 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 393 |
| AsuHPI | GGTGA | 3 cut(s) | 155, 337, 571 |
| BaeGI | GKGCMC | 2 cut(s) | 198, 262 |
| Bbv12I | GWGCWC | 2 cut(s) | 182, 198 |
| BbvI | GCAGC | 2 cut(s) | 229, 420 |
| BccI | CCATC | 6 cut(s) | 103, 274, 458, 464, 550, 613 |
| BceAI | ACGGC | 1 cut(s) | 601 |
| BfaI | CTAG | 1 cut(s) | 132 |
| BglII | AGATCT | 1 cut(s) | 367 |
| BisI | GCNGC | 2 cut(s) | 218, 434 |
| BlsI | GCNGC | 2 cut(s) | 219, 435 |
| BpmI | CTGGAG | 1 cut(s) | 141 |
| BpuEI | CTTGAG | 1 cut(s) | 166 |
| Bsa29I | ATCGAT | 1 cut(s) | 45 |
| BsaBI | GATNNNNATC | 2 cut(s) | 113, 366 |
| BsaJI | CCNNGG | 2 cut(s) | 163, 334 |
| Bse1I | ACTGG | 2 cut(s) | 124, 383 |
| Bse8I | GATNNNNATC | 2 cut(s) | 113, 366 |
| BseCI | ATCGAT | 1 cut(s) | 45 |
| BseDI | CCNNGG | 2 cut(s) | 163, 334 |
| BseGI | GGATG | 2 cut(s) | 285, 469 |
| BseJI | GATNNNNATC | 2 cut(s) | 113, 366 |
| BseMII | CTCAG | 1 cut(s) | 557 |
| BseNI | ACTGG | 2 cut(s) | 124, 383 |
| BseSI | GKGCMC | 2 cut(s) | 198, 262 |
| BseXI | GCAGC | 2 cut(s) | 229, 420 |
| BshVI | ATCGAT | 1 cut(s) | 45 |
| BsiHKAI | GWGCWC | 2 cut(s) | 182, 198 |
| Bsp1286I | GDGCHC | 3 cut(s) | 182, 198, 262 |
| Bsp143I | GATC | 2 cut(s) | 114, 367 |
| Bsp19I | CCATGG | 1 cut(s) | 163 |
| BspCNI | CTCAG | 1 cut(s) | 556 |
| BspDI | ATCGAT | 1 cut(s) | 45 |
| BspPI | GGATC | 1 cut(s) | 122 |
| BsrI | ACTGG | 2 cut(s) | 124, 383 |
| BssECI | CCNNGG | 2 cut(s) | 163, 334 |
| BssMI | GATC | 2 cut(s) | 114, 367 |
| BssNAI | GTATAC | 1 cut(s) | 6 |
| BssT1I | CCWWGG | 2 cut(s) | 163, 334 |
| Bst1107I | GTATAC | 1 cut(s) | 6 |
| Bst4CI | ACNGT | 1 cut(s) | 271 |
| Bst6I | CTCTTC | 2 cut(s) | 384, 491 |
| BstC8I | GCNNGC | 1 cut(s) | 215 |
| BstDEI | CTNAG | 1 cut(s) | 543 |
| BstDSI | CCRYGG | 1 cut(s) | 163 |
| BstF5I | GGATG | 2 cut(s) | 285, 469 |
| BstKTI | GATC | 2 cut(s) | 117, 370 |
| BstMBI | GATC | 2 cut(s) | 114, 367 |
| BstSLI | GKGCMC | 2 cut(s) | 198, 262 |
| BstV1I | GCAGC | 2 cut(s) | 229, 420 |
| BstX2I | RGATCY | 1 cut(s) | 367 |
| BstYI | RGATCY | 1 cut(s) | 367 |
| BstZ17I | GTATAC | 1 cut(s) | 6 |
| Bsu15I | ATCGAT | 1 cut(s) | 45 |
| BsuTUI | ATCGAT | 1 cut(s) | 45 |
| BtgI | CCRYGG | 1 cut(s) | 163 |
| BtsCI | GGATG | 2 cut(s) | 285, 469 |
| BtsIMutI | CAGTG | 3 cut(s) | 117, 267, 390 |
| Cac8I | GCNNGC | 1 cut(s) | 215 |
| ClaI | ATCGAT | 1 cut(s) | 45 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 303, 338 |
| CviAII | CATG | 2 cut(s) | 155, 164 |
| CviJI | RGCY | 5 cut(s) | 136, 220, 339, 485, 542 |
| CviKI_1 | RGCY | 5 cut(s) | 136, 220, 339, 485, 542 |
| DdeI | CTNAG | 1 cut(s) | 543 |
| DpnI | GATC | 2 cut(s) | 116, 369 |
| DpnII | GATC | 2 cut(s) | 114, 367 |
| Eam1104I | CTCTTC | 2 cut(s) | 384, 491 |
| EarI | CTCTTC | 2 cut(s) | 384, 491 |
| Eco130I | CCWWGG | 2 cut(s) | 163, 334 |
| EcoT14I | CCWWGG | 2 cut(s) | 163, 334 |
| ErhI | CCWWGG | 2 cut(s) | 163, 334 |
| FaeI | CATG | 2 cut(s) | 158, 167 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 381, 413 |
| FatI | CATG | 2 cut(s) | 154, 163 |
| FblI | GTMKAC | 1 cut(s) | 5 |
| Fnu4HI | GCNGC | 2 cut(s) | 218, 434 |
| FokI | GGATG | 2 cut(s) | 292, 476 |
| Fsp4HI | GCNGC | 2 cut(s) | 218, 434 |
| FspBI | CTAG | 1 cut(s) | 132 |
| GluI | GCNGC | 2 cut(s) | 218, 434 |
| GsuI | CTGGAG | 1 cut(s) | 141 |
| Hin1II | CATG | 2 cut(s) | 158, 167 |
| HincII | GTYRAC | 1 cut(s) | 241 |
| HindII | GTYRAC | 1 cut(s) | 241 |
| HinfI | GANTC | 2 cut(s) | 20, 245 |
| HphI | GGTGA | 3 cut(s) | 155, 337, 571 |
| Hpy166II | GTNNAC | 3 cut(s) | 6, 196, 241 |
| Hpy188I | TCNGA | 1 cut(s) | 546 |
| Hpy188III | TCNNGA | 2 cut(s) | 371, 448 |
| Hpy8I | GTNNAC | 3 cut(s) | 6, 196, 241 |
| HpyAV | CCTTC | 5 cut(s) | 31, 169, 298, 304, 556 |
| HpyCH4III | ACNGT | 1 cut(s) | 271 |
| HpyCH4V | TGCA | 4 cut(s) | 94, 196, 213, 230 |
| HpyF3I | CTNAG | 1 cut(s) | 543 |
| Hsp92II | CATG | 2 cut(s) | 158, 167 |
| Kzo9I | GATC | 2 cut(s) | 114, 367 |
| LpnPI | CCDG | 2 cut(s) | 105, 396 |
| Lsp1109I | GCAGC | 2 cut(s) | 229, 420 |
| MaeI | CTAG | 1 cut(s) | 132 |
| MaeIII | GTNAC | 2 cut(s) | 143, 347 |
| MalI | GATC | 2 cut(s) | 116, 369 |
| MboI | GATC | 2 cut(s) | 114, 367 |
| MboII | GAAGA | 9 cut(s) | 71, 218, 306, 340, 371, 377, 401, 508, 565 |
| MflI | RGATCY | 1 cut(s) | 367 |
| MhlI | GDGCHC | 3 cut(s) | 182, 198, 262 |
| MluCI | AATT | 2 cut(s) | 25, 577 |
| MlyI | GAGTC | 1 cut(s) | 254 |
| MmeI | TCCRAC | 3 cut(s) | 387, 486, 501 |
| MnlI | CCTC | 4 cut(s) | 349, 385, 475, 492 |
| MroXI | GAANNNNTTC | 1 cut(s) | 393 |
| MseI | TTAA | 1 cut(s) | 614 |
| MslI | CAYNNNNRTG | 4 cut(s) | 122, 191, 201, 269 |
| NcoI | CCATGG | 1 cut(s) | 163 |
| NdeII | GATC | 2 cut(s) | 114, 367 |
| NlaIII | CATG | 2 cut(s) | 158, 167 |
| NmuCI | GTSAC | 1 cut(s) | 143 |
| OliI | CACNNNNGTG | 2 cut(s) | 122, 191 |
| PdmI | GAANNNNTTC | 1 cut(s) | 393 |
| PfeI | GAWTC | 1 cut(s) | 20 |
| PkrI | GCNGC | 2 cut(s) | 219, 435 |
| PleI | GAGTC | 1 cut(s) | 253 |
| PpsI | GAGTC | 1 cut(s) | 253 |
| PsuI | RGATCY | 1 cut(s) | 367 |
| RseI | CAYNNNNRTG | 4 cut(s) | 122, 191, 201, 269 |
| SaqAI | TTAA | 1 cut(s) | 614 |
| SatI | GCNGC | 2 cut(s) | 218, 434 |
| Sau3AI | GATC | 2 cut(s) | 114, 367 |
| SchI | GAGTC | 1 cut(s) | 254 |
| SduI | GDGCHC | 3 cut(s) | 182, 198, 262 |
| SetI | ASST | 5 cut(s) | 179, 336, 396, 567, 594 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 122, 191, 201, 269 |
| SmlI | CTYRAG | 1 cut(s) | 181 |
| SmoI | CTYRAG | 1 cut(s) | 181 |
| Sse9I | AATT | 2 cut(s) | 25, 577 |
| SspMI | CTAG | 1 cut(s) | 132 |
| StyI | CCWWGG | 2 cut(s) | 163, 334 |
| TaaI | ACNGT | 1 cut(s) | 271 |
| TaqI | TCGA | 2 cut(s) | 45, 456 |
| TasI | AATT | 2 cut(s) | 25, 577 |
| TfiI | GAWTC | 1 cut(s) | 20 |
| Tru1I | TTAA | 1 cut(s) | 614 |
| Tru9I | TTAA | 1 cut(s) | 614 |
| TscAI | CASTG | 3 cut(s) | 124, 274, 390 |
| TseFI | GTSAC | 1 cut(s) | 143 |
| TseI | GCWGC | 2 cut(s) | 217, 433 |
| Tsp45I | GTSAC | 1 cut(s) | 143 |
| TspDTI | ATGAA | 7 cut(s) | 47, 50, 143, 219, 378, 390, 441 |
| TspRI | CASTG | 3 cut(s) | 124, 274, 390 |
| VneI | GTGCAC | 1 cut(s) | 194 |
| XapI | RAATTY | 1 cut(s) | 577 |
| XmiI | GTMKAC | 1 cut(s) | 5 |
| XmnI | GAANNNNTTC | 1 cut(s) | 393 |
| XspI | CTAG | 1 cut(s) | 132 |