EF-hand domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g36371 |
| malus_domestica | MD08G1123200.v1.1 MD15G1102200.v1.1 |
| prunus_persica | Prupe.1G455200_v2.0.a1 |
| pyrus_communis | pycom15g09340 |
| rosa_laevigata | RLG00000010883 |
| rosa_multiflora | Rmu_sc0001809.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00162730 |
| rosa_rugosa | Rorug06G0340900 |
| rosa_samantha | Rh6AG453100 Rh6BG448700 Rh6CG466800 Rh6DG453500 |
| rosa_wichuraiana | Rw6G039480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 17 |
| AcsI | RAATTY | 1 cut(s) | 517 |
| AdeI | CACNNNGTG | 1 cut(s) | 119 |
| AgsI | TTSAA | 4 cut(s) | 388, 436, 517, 551 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 312, 344, 428, 460 |
| AleI | CACNNNNGTG | 1 cut(s) | 17 |
| AluBI | AGCT | 1 cut(s) | 425 |
| AluI | AGCT | 1 cut(s) | 425 |
| Alw21I | GWGCWC | 2 cut(s) | 26, 77 |
| Alw26I | GTCTC | 1 cut(s) | 70 |
| AlwI | GGATC | 1 cut(s) | 17 |
| AoxI | GGCC | 1 cut(s) | 204 |
| ApeKI | GCWGC | 1 cut(s) | 373 |
| ApoI | RAATTY | 1 cut(s) | 517 |
| AseI | ATTAAT | 1 cut(s) | 554 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 324 |
| AsuC2I | CCSGG | 1 cut(s) | 288 |
| AsuHPI | GGTGA | 3 cut(s) | 50, 344, 511 |
| BaeGI | GKGCMC | 1 cut(s) | 154 |
| BbsI | GAAGAC | 3 cut(s) | 258, 264, 270 |
| Bbv12I | GWGCWC | 2 cut(s) | 26, 77 |
| BbvI | GCAGC | 1 cut(s) | 360 |
| BccI | CCATC | 7 cut(s) | 166, 344, 398, 404, 490, 518, 553 |
| BclI | TGATCA | 1 cut(s) | 298 |
| BcnI | CCSGG | 1 cut(s) | 288 |
| BcoDI | GTCTC | 1 cut(s) | 70 |
| BfaI | CTAG | 1 cut(s) | 27 |
| BisI | GCNGC | 1 cut(s) | 374 |
| BlsI | GCNGC | 1 cut(s) | 375 |
| Bme1390I | CCNGG | 1 cut(s) | 288 |
| BmrFI | CCNGG | 1 cut(s) | 288 |
| BmsI | GCATC | 1 cut(s) | 360 |
| BpiI | GAAGAC | 3 cut(s) | 258, 264, 270 |
| BpmI | CTGGAG | 1 cut(s) | 36 |
| BpuEI | CTTGAG | 2 cut(s) | 52, 61 |
| BpuMI | CCSGG | 1 cut(s) | 288 |
| BsaBI | GATNNNNATC | 2 cut(s) | 8, 297 |
| BsaJI | CCNNGG | 1 cut(s) | 287 |
| Bse1I | ACTGG | 2 cut(s) | 19, 314 |
| Bse8I | GATNNNNATC | 2 cut(s) | 8, 297 |
| BseDI | CCNNGG | 1 cut(s) | 287 |
| BseGI | GGATG | 3 cut(s) | 177, 409, 529 |
| BseJI | GATNNNNATC | 2 cut(s) | 8, 297 |
| BseNI | ACTGG | 2 cut(s) | 19, 314 |
| BseSI | GKGCMC | 1 cut(s) | 154 |
| BseXI | GCAGC | 1 cut(s) | 360 |
| BshFI | GGCC | 1 cut(s) | 206 |
| BsiHKAI | GWGCWC | 2 cut(s) | 26, 77 |
| BsiSI | CCGG | 1 cut(s) | 287 |
| BsmAI | GTCTC | 1 cut(s) | 70 |
| BsnI | GGCC | 1 cut(s) | 206 |
| Bsp1286I | GDGCHC | 3 cut(s) | 26, 77, 154 |
| Bsp143I | GATC | 2 cut(s) | 9, 298 |
| BspANI | GGCC | 1 cut(s) | 206 |
| BspHI | TCATGA | 1 cut(s) | 301 |
| BspPI | GGATC | 1 cut(s) | 17 |
| BsrI | ACTGG | 2 cut(s) | 19, 314 |
| BssECI | CCNNGG | 1 cut(s) | 287 |
| BssMI | GATC | 2 cut(s) | 9, 298 |
| Bst4CI | ACNGT | 1 cut(s) | 163 |
| Bst6I | CTCTTC | 1 cut(s) | 431 |
| BstC8I | GCNNGC | 1 cut(s) | 110 |
| BstDEI | CTNAG | 1 cut(s) | 357 |
| BstF5I | GGATG | 3 cut(s) | 177, 409, 529 |
| BstKTI | GATC | 2 cut(s) | 12, 301 |
| BstMAI | GTCTC | 1 cut(s) | 70 |
| BstMBI | GATC | 2 cut(s) | 9, 298 |
| BstSCI | CCNGG | 1 cut(s) | 286 |
| BstSLI | GKGCMC | 1 cut(s) | 154 |
| BstV1I | GCAGC | 1 cut(s) | 360 |
| BstV2I | GAAGAC | 3 cut(s) | 258, 264, 270 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 214 |
| BsuRI | GGCC | 1 cut(s) | 206 |
| BtsCI | GGATG | 3 cut(s) | 177, 409, 529 |
| BtsIMutI | CAGTG | 3 cut(s) | 12, 159, 321 |
| Cac8I | GCNNGC | 1 cut(s) | 110 |
| CciI | TCATGA | 1 cut(s) | 301 |
| CviAII | CATG | 3 cut(s) | 50, 59, 302 |
| CviJI | RGCY | 5 cut(s) | 89, 112, 206, 425, 482 |
| CviKI_1 | RGCY | 5 cut(s) | 89, 112, 206, 425, 482 |
| DdeI | CTNAG | 1 cut(s) | 357 |
| DpnI | GATC | 2 cut(s) | 11, 300 |
| DpnII | GATC | 2 cut(s) | 9, 298 |
| DraIII | CACNNNGTG | 1 cut(s) | 119 |
| Eam1104I | CTCTTC | 1 cut(s) | 431 |
| EarI | CTCTTC | 1 cut(s) | 431 |
| FaeI | CATG | 3 cut(s) | 53, 62, 305 |
| FaiI | YATR | 7 cut(s) | 51, 60, 143, 238, 303, 419, 479 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 266, 298, 312, 344 |
| FatI | CATG | 3 cut(s) | 49, 58, 301 |
| FbaI | TGATCA | 1 cut(s) | 298 |
| Fnu4HI | GCNGC | 1 cut(s) | 374 |
| FokI | GGATG | 3 cut(s) | 184, 416, 536 |
| Fsp4HI | GCNGC | 1 cut(s) | 374 |
| FspBI | CTAG | 1 cut(s) | 27 |
| GluI | GCNGC | 1 cut(s) | 374 |
| GsuI | CTGGAG | 1 cut(s) | 36 |
| HaeIII | GGCC | 1 cut(s) | 206 |
| HapII | CCGG | 1 cut(s) | 287 |
| Hin1II | CATG | 3 cut(s) | 53, 62, 305 |
| HincII | GTYRAC | 1 cut(s) | 133 |
| HindII | GTYRAC | 1 cut(s) | 133 |
| HinfI | GANTC | 3 cut(s) | 63, 137, 223 |
| HpaII | CCGG | 1 cut(s) | 287 |
| HphI | GGTGA | 3 cut(s) | 50, 344, 511 |
| Hpy166II | GTNNAC | 1 cut(s) | 133 |
| Hpy188III | TCNNGA | 2 cut(s) | 302, 388 |
| Hpy8I | GTNNAC | 1 cut(s) | 133 |
| HpyAV | CCTTC | 4 cut(s) | 190, 196, 496, 523 |
| HpyCH4III | ACNGT | 1 cut(s) | 163 |
| HpyCH4V | TGCA | 2 cut(s) | 108, 122 |
| HpyF3I | CTNAG | 1 cut(s) | 357 |
| Hsp92II | CATG | 3 cut(s) | 53, 62, 305 |
| Ksp22I | TGATCA | 1 cut(s) | 298 |
| Kzo9I | GATC | 2 cut(s) | 9, 298 |
| LpnPI | CCDG | 2 cut(s) | 300, 327 |
| Lsp1109I | GCAGC | 1 cut(s) | 360 |
| LweI | GCATC | 1 cut(s) | 360 |
| MaeI | CTAG | 1 cut(s) | 27 |
| MaeIII | GTNAC | 2 cut(s) | 38, 239 |
| MalI | GATC | 2 cut(s) | 11, 300 |
| MboI | GATC | 2 cut(s) | 9, 298 |
| MboII | GAAGA | 7 cut(s) | 113, 263, 269, 275, 332, 448, 505 |
| MhlI | GDGCHC | 3 cut(s) | 26, 77, 154 |
| MluCI | AATT | 3 cut(s) | 93, 517, 551 |
| MlyI | GAGTC | 2 cut(s) | 72, 146 |
| MmeI | TCCRAC | 2 cut(s) | 426, 441 |
| MnlI | CCTC | 3 cut(s) | 241, 394, 432 |
| MroXI | GAANNNNTTC | 1 cut(s) | 324 |
| MseI | TTAA | 1 cut(s) | 554 |
| MslI | CAYNNNNRTG | 2 cut(s) | 17, 161 |
| MspI | CCGG | 1 cut(s) | 287 |
| MspR9I | CCNGG | 1 cut(s) | 288 |
| NciI | CCSGG | 1 cut(s) | 288 |
| NdeII | GATC | 2 cut(s) | 9, 298 |
| NlaIII | CATG | 3 cut(s) | 53, 62, 305 |
| NmuCI | GTSAC | 1 cut(s) | 38 |
| OliI | CACNNNNGTG | 1 cut(s) | 17 |
| PagI | TCATGA | 1 cut(s) | 301 |
| PdmI | GAANNNNTTC | 1 cut(s) | 324 |
| PfeI | GAWTC | 1 cut(s) | 223 |
| PkrI | GCNGC | 1 cut(s) | 375 |
| PleI | GAGTC | 2 cut(s) | 71, 145 |
| PpsI | GAGTC | 2 cut(s) | 71, 145 |
| PshBI | ATTAAT | 1 cut(s) | 554 |
| RseI | CAYNNNNRTG | 2 cut(s) | 17, 161 |
| SaqAI | TTAA | 1 cut(s) | 554 |
| SatI | GCNGC | 1 cut(s) | 374 |
| Sau3AI | GATC | 2 cut(s) | 9, 298 |
| SchI | GAGTC | 2 cut(s) | 72, 146 |
| ScrFI | CCNGG | 1 cut(s) | 288 |
| SduI | GDGCHC | 3 cut(s) | 26, 77, 154 |
| SetI | ASST | 5 cut(s) | 32, 74, 427, 507, 534 |
| SfaNI | GCATC | 1 cut(s) | 360 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 17, 161 |
| SmlI | CTYRAG | 2 cut(s) | 67, 76 |
| SmoI | CTYRAG | 2 cut(s) | 67, 76 |
| Sse9I | AATT | 3 cut(s) | 93, 517, 551 |
| SspMI | CTAG | 1 cut(s) | 27 |
| StyD4I | CCNGG | 1 cut(s) | 286 |
| TaaI | ACNGT | 1 cut(s) | 163 |
| TaqI | TCGA | 3 cut(s) | 279, 378, 396 |
| TasI | AATT | 3 cut(s) | 93, 517, 551 |
| TfiI | GAWTC | 1 cut(s) | 223 |
| Tru1I | TTAA | 1 cut(s) | 554 |
| Tru9I | TTAA | 1 cut(s) | 554 |
| TscAI | CASTG | 3 cut(s) | 19, 166, 321 |
| TseFI | GTSAC | 1 cut(s) | 38 |
| TseI | GCWGC | 1 cut(s) | 373 |
| Tsp45I | GTSAC | 1 cut(s) | 38 |
| TspDTI | ATGAA | 4 cut(s) | 38, 47, 114, 321 |
| TspRI | CASTG | 3 cut(s) | 19, 166, 321 |
| VspI | ATTAAT | 1 cut(s) | 554 |
| XapI | RAATTY | 1 cut(s) | 517 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 214 |
| XmnI | GAANNNNTTC | 1 cut(s) | 324 |
| XspI | CTAG | 1 cut(s) | 27 |