Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0016680

Physical Location & Seq

Genomic Coordinates Forward (+)

27549075 .. 27551805

Gene Structure 2731 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g38000.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGACCAGGCAAGTCCTCAATCTCTCTGACCATTTACTCCACAAACTCCTCAGCTTCTTAAACCCCTCATCCTCCTTATCACAGGCCCACCAAGCCCACGCCCAGATCCTCAAGACAGGTCTCTCCAATCACACCAATCTCACCACCAAGCTCCTCTCCCTCTACGCCAACAGCCTCTGCTTCGTCGAAGCCAAACTCGTCCTCCACTCTATTCCACACCCCAACCTGTTCTCCTTCTCCACTCTCATCCACGCTTTCGCCAAGCTCAACAGCTTCGGCAATGCGCTTTCCTTGTTCTCCCAAATGCTATCTCGGGGCCTCGCCCCGGATAGCTTCCTCTTCCCCAGTGTCGTCAAGGCCTGCGCCGGACTGCAATCTTCGCAGTCCGCGAGACAGGTCCATGCGATCTCGTTTTCTTCGGGTTTCGCTTTGGATTCGTTTGTGCAATCCTCTCTGGTTCACATGTATATTAAATGTGACCGGATTGGCGATGCACGCAAGGTGTTTGATAGAGTGCCTGAGAGAGATGTGATTATTTACAGCGCTTTGATTTCGGGGTATTCTCGCCGCGGGTGCGTGGATGAGGCGATGAGGCTTTTGGGTGAGATGAGGGGTTTGGGGTTTGTGCCGAATGTGGTGTTGTGGAATGGGATGATTGCCGGGTTTAGTCAAAGCAAGTTGTATGCTAGTACGGTTGGGGTGTTTCAGAAGATGCACTCGCAAGGGTTTGAACCCGATGGGTCTAGTATTTCTAGTGTTCTTCCTGCTGTAGGGGAGTTGGAAGATTTAGACATTGGGGTTCAGATTCATGGACAAGTGATCAAGCGGGGGCTAAAATCGGACAAGTGTGTTGTTAGTGCACTTGTCGATATGTATGGGAAGTGTGCTTGCACGTTAGAGATGTCTCGAGTTGTTGGTGAAATGGATGAATTAGATGTTGGTGCTTGCAATGCTTTGGTGACAGGGCTTGCCCGAAATGGTCTTGTGGACAATGCACTTGAGGTGTTCATGCAATTTAAGGGCCAAGGAGTGGAACTCAATACTGTGTCTTGGACCTCCATAATTGCTAGTTGTTCCCAAAATGGGAAGGATATGGAGGCTTTGGAGCTTTTTAGAGAGATGCAGATAGAGGGTGTGGAGCCAAACTCTATGACTATCTCTTGCTTGCTTCCTGCTTGTGGCAATATTGCAGCCTTAACGCATGGGAAGGCAGCCCATTGTTTCGCTTTCAGAAGGGGGATGCTTAGTGATGTGTATGTGGGCAGTGCGTTGATTGATATGTATGCAAAATGCGGGAAAATCCAATTATCTCGGCTTTGTTTTGATAAAATGCCAACTAGGAATTTAGTTTGCTGGAACGCAGTTATGAGCGGATATGCAATGCATGGAAAAGCCAAGGAAACTATGGAGATTTTTCATATGATGCAGAGGAGTGGACTGAAGCCCGATATAATCAGCTTCACCTGTGTATTGTCTGCATGTAGCCAGAACGGTCTAACAGAAGAAGGATGGTATTATTTTAACAGCATGTCAAAAGAACACGGTATAGAGGCTCGAATAGAACATTATGCTTGCATGGTCACACTACTCGGTCGTGCTGGAAAACTTGATGAGGCTTATTCCATGATCAAGAAAATGCCATTTGAGCCAGATGCTTGTGTTTGGGGAGCTTTACTGAGCTCTTGTAGAGTTCACAACAATGTGACTTTAGGGGAGTCTACTGCAAAGAAGCTCTTCAATTTAGAACCGGGAAATCCCGGGAACTACATTCTTTTGTCCAATATCTATGCTTCAAAAGGCATGTGGACTGAAGTAGATAGAGTGAGAGACACAATGAAGAGTCTGGGCTTGAGGAAGAACCCTGGCTGCAGTTGGATTGAATTCAAGAACAACGTTCACATGCTTCTTGCAGGAGACAAAACACATCCTCAAATGAACAAAATTACGGAAAAGTTGAATACATTGAGCTCGGAGATGAAGAAATCAGGATACTTACCCAGTACTCATTTTGTATTGCAAGATGTGGAGGAACAAGAAAAGGAGCAGATTTTGTGTGGTCACAGTGAGAAATTGGCAGTAGTGTTGGGGCTTCTGAACACTCCTCCAGGGTCTTCCCTTAGGGTGATTAAGAACCTCCGGATCTGTGGTGATTGTCATTCTGTTATCAAATTCATATCCAGCTTGGAAGGAAGAGAGATTTCAGTCAGAGACACCAATCGCTTTCATCATTTTAAAGATGGAGTTTGTTCTTGTGGGGATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

756

Amino Acids

83.2

Weight (kDa)

8.05

Isoelectric Point (pI)

41.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	74 - 122	7.5e-07	PPR repeat family
PPR_2	PF13041	175 - 213	2.5e-07	PPR repeat family
PPR_1	PF12854	175 - 204	3.5e-07	PPR repeat
PPR	PF01535	179 - 208	1.1e-07	PPR repeat
PPR_3	PF13812	340 - 395	5e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	347 - 394	2.7e-10	PPR repeat family
PPR	PF01535	349 - 379	1.1e-06	PPR repeat
PPR_2	PF13041	448 - 495	4.6e-11	PPR repeat family
PPR_3	PF13812	448 - 496	4.9e-06	Pentatricopeptide repeat domain
PPR	PF01535	450 - 480	2.6e-06	PPR repeat
E_motif	PF20431	565 - 627	7.8e-25	E motif
Eplus_motif	PF20430	632 - 659	7.9e-06	E+ motif
DYW_deaminase	PF14432	663 - 755	7.1e-44	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0016680)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20230
fragaria_vesca	FvH4_2g38000
malus_domestica	MD15G1007100.v1.1
prunus_persica	Prupe.1G360000_v2.0.a1
pyrus_communis	pycom15g00570
rosa_chinensis	RchiOBHm_Chr6g0303611
rosa_laevigata	RLG00000011068
rosa_multiflora	Rmu_ssc0000114.1_g000022
rosa_roxburghii	Rroxscaffold_7G00164580
rosa_rugosa	Rorug06G0322800
rosa_samantha	Rh6AG437300 Rh6BG466000 Rh6DG436000
rosa_wichuraiana	Rw6G037850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1030
AccBSI	CCGCTC	1 cut(s)	1371
AccI	GTMKAC	1 cut(s)	1718
AccII	CGCG	2 cut(s)	389, 570
AccIII	TCCGGA	1 cut(s)	2136
AciI	CCGC	6 cut(s)	387, 568, 570, 826, 1293, 1371
AclI	AACGTT	1 cut(s)	1893
AclWI	GGATC	2 cut(s)	100, 2147
AcsI	RAATTY	3 cut(s)	1342, 1880, 2168
AcuI	CTGAAG	2 cut(s)	1460, 1830
AfaI	GTAC	2 cut(s)	691, 2002
AfeI	AGCGCT	1 cut(s)	544
AfiI	CCNNNNNNNGG	5 cut(s)	325, 770, 1030, 1083, 1178
AflIII	ACRYGT	1 cut(s)	462
AgsI	TTSAA	6 cut(s)	731, 1738, 1794, 1880, 1885, 1957
AjnI	CCWGG	3 cut(s)	5, 1861, 2104
AjuI	GAANNNNNNNTTGG	2 cut(s)	921, 953
Alw21I	GWGCWC	3 cut(s)	862, 1682, 1970
Alw26I	GTCTC	6 cut(s)	125, 385, 909, 1821, 1908, 2202
Alw44I	GTGCAC	1 cut(s)	858
AlwI	GGATC	2 cut(s)	100, 2147
AlwNI	CAGNNNCTG	1 cut(s)	177
Ama87I	CYCGRG	3 cut(s)	312, 906, 1757
Aor13HI	TCCGGA	1 cut(s)	2136
Aor51HI	AGCGCT	1 cut(s)	544
AoxI	GGCC	4 cut(s)	84, 316, 357, 1021
ApaLI	GTGCAC	1 cut(s)	858
ApeKI	GCWGC	3 cut(s)	1190, 1211, 1866
ApoI	RAATTY	3 cut(s)	1342, 1880, 2168
Asp700I	GAANNNNTTC	1 cut(s)	1733
AspLEI	GCGC	3 cut(s)	286, 365, 545
AspS9I	GGNCC	5 cut(s)	85, 316, 397, 1021, 1053
AsuC2I	CCSGG	5 cut(s)	326, 661, 1749, 1758, 1759
AsuHPI	GGTGA	7 cut(s)	133, 614, 929, 970, 1453, 2134, 2159
AvaI	CYCGRG	3 cut(s)	312, 906, 1757
AvaII	GGWCC	2 cut(s)	397, 1053
AxyI	CCTNAGG	1 cut(s)	2117
BaeGI	GKGCMC	1 cut(s)	862
BanII	GRGCYC	2 cut(s)	1682, 1970
BbsI	GAAGAC	1 cut(s)	2103
Bbv12I	GWGCWC	3 cut(s)	862, 1682, 1970
BbvCI	CCTCAGC	1 cut(s)	50
BbvI	GCAGC	3 cut(s)	1202, 1223, 1853
BccI	CCATC	3 cut(s)	731, 1503, 2231
BciT130I	CCWGG	3 cut(s)	7, 1863, 2106
BciVI	GTATCC	1 cut(s)	1982
BclI	TGATCA	2 cut(s)	819, 1626
BcnI	CCSGG	5 cut(s)	326, 661, 1749, 1758, 1759
BcoDI	GTCTC	6 cut(s)	125, 385, 909, 1821, 1908, 2202
BfaI	CTAG	5 cut(s)	687, 744, 753, 1068, 1338
BfmI	CTRYAG	2 cut(s)	768, 1867
BfoI	RGCGCY	1 cut(s)	546
BfuI	GTATCC	1 cut(s)	1982
BisI	GCNGC	4 cut(s)	568, 1191, 1212, 1867
BlsI	GCNGC	4 cut(s)	569, 1192, 1213, 1868
BmcAI	AGTACT	1 cut(s)	2002
Bme1390I	CCNGG	8 cut(s)	7, 326, 661, 1749, 1758, 1759, 1863, 2106
Bme18I	GGWCC	2 cut(s)	397, 1053
BmeT110I	CYCGRG	3 cut(s)	312, 906, 1757
BmgT120I	GGNCC	5 cut(s)	85, 316, 397, 1021, 1053
BmiI	GGNNCC	2 cut(s)	317, 1140
BmrFI	CCNGG	8 cut(s)	7, 326, 661, 1749, 1758, 1759, 1863, 2106
BmrI	ACTGGG	2 cut(s)	339, 1992
BmsI	GCATC	6 cut(s)	481, 702, 1110, 1230, 1413, 1642
BmuI	ACTGGG	2 cut(s)	339, 1992
BpiI	GAAGAC	1 cut(s)	2103
BplI	GAGNNNNNCTC	4 cut(s)	1020, 1052, 1130, 1162
BpmI	CTGGAG	1 cut(s)	2088
Bpu10I	CCTNAGC	1 cut(s)	50
BpuEI	CTTGAG	3 cut(s)	95, 1019, 1870
BpuMI	CCSGG	5 cut(s)	326, 661, 1749, 1758, 1759
BsaI	GGTCTC	1 cut(s)	125
BsaJI	CCNNGG	7 cut(s)	324, 568, 1024, 1395, 1757, 1861, 2105
BsaWI	WCCGGW	2 cut(s)	480, 2136
BsaXI	ACNNNNNCTCC	4 cut(s)	186, 215, 216, 245
Bsc4I	CCNNNNNNNGG	5 cut(s)	325, 770, 1030, 1083, 1178
Bse1I	ACTGG	3 cut(s)	345, 1998, 2267
Bse21I	CCTNAGG	1 cut(s)	2117
Bse3DI	GCAATG	3 cut(s)	286, 955, 1386
BseAI	TCCGGA	1 cut(s)	2136
BseBI	CCWGG	3 cut(s)	7, 1863, 2106
BseDI	CCNNGG	7 cut(s)	324, 568, 1024, 1395, 1757, 1861, 2105
BseGI	GGATG	8 cut(s)	68, 246, 586, 657, 931, 1245, 1514, 1924
BseLI	CCNNNNNNNGG	5 cut(s)	325, 770, 1030, 1083, 1178
BseMI	GCAATG	3 cut(s)	286, 955, 1386
BseMII	CTCAG	3 cut(s)	64, 510, 1667
BseNI	ACTGG	3 cut(s)	345, 1998, 2267
BseRI	GAGGAG	4 cut(s)	38, 143, 1444, 2091
BseSI	GKGCMC	1 cut(s)	862
BseXI	GCAGC	3 cut(s)	1202, 1223, 1853
Bsh1236I	CGCG	2 cut(s)	389, 570
Bsh1285I	CGRYCG	1 cut(s)	1594
BshFI	GGCC	4 cut(s)	86, 318, 359, 1023
BsiEI	CGRYCG	1 cut(s)	1594
BsiHKAI	GWGCWC	3 cut(s)	862, 1682, 1970
BsiHKCI	CYCGRG	3 cut(s)	312, 906, 1757
BsiSI	CCGG	7 cut(s)	326, 366, 481, 660, 1748, 1758, 2137
BslI	CCNNNNNNNGG	5 cut(s)	325, 770, 1030, 1083, 1178
BsmAI	GTCTC	6 cut(s)	125, 385, 909, 1821, 1908, 2202
BsnI	GGCC	4 cut(s)	86, 318, 359, 1023
Bso31I	GGTCTC	1 cut(s)	125
BsoBI	CYCGRG	3 cut(s)	312, 906, 1757
Bsp1286I	GDGCHC	3 cut(s)	862, 1682, 1970
Bsp13I	TCCGGA	1 cut(s)	2136
Bsp143I	GATC	5 cut(s)	105, 405, 819, 1626, 2139
BspACI	CCGC	6 cut(s)	387, 568, 570, 826, 1293, 1371
BspANI	GGCC	4 cut(s)	86, 318, 359, 1023
BspCNI	CTCAG	3 cut(s)	63, 511, 1668
BspEI	TCCGGA	1 cut(s)	2136
BspFNI	CGCG	2 cut(s)	389, 570
BspLI	GGNNCC	2 cut(s)	317, 1140
BspMAI	CTGCAG	1 cut(s)	1871
BspPI	GGATC	2 cut(s)	100, 2147
BspQI	GCTCTTC	1 cut(s)	1739
BspTNI	GGTCTC	1 cut(s)	125
BsrBI	CCGCTC	1 cut(s)	1371
BsrDI	GCAATG	3 cut(s)	286, 955, 1386
BsrI	ACTGG	3 cut(s)	345, 1998, 2267
BssECI	CCNNGG	7 cut(s)	324, 568, 1024, 1395, 1757, 1861, 2105
BssMI	GATC	5 cut(s)	105, 405, 819, 1626, 2139
BssT1I	CCWWGG	2 cut(s)	1024, 1395
Bst2UI	CCWGG	3 cut(s)	7, 1863, 2106
Bst4CI	ACNGT	5 cut(s)	694, 1045, 1493, 1544, 2063
Bst6I	CTCTTC	4 cut(s)	344, 1739, 1832, 2185
BstC8I	GCNNGC	7 cut(s)	361, 496, 889, 946, 969, 1166, 1573
BstDEI	CTNAG	5 cut(s)	50, 519, 1244, 1676, 2117
BstDSI	CCRYGG	1 cut(s)	568
BstENI	CCTNNNNNAGG	1 cut(s)	768
BstF5I	GGATG	8 cut(s)	68, 246, 586, 657, 931, 1245, 1514, 1924
BstFNI	CGCG	2 cut(s)	389, 570
BstH2I	RGCGCY	1 cut(s)	546
BstHHI	GCGC	3 cut(s)	286, 365, 545
BstKTI	GATC	5 cut(s)	108, 408, 822, 1629, 2142
BstMAI	GTCTC	6 cut(s)	125, 385, 909, 1821, 1908, 2202
BstMBI	GATC	5 cut(s)	105, 405, 819, 1626, 2139
BstMCI	CGRYCG	1 cut(s)	1594
BstMWI	GCNNNNNNNGC	6 cut(s)	92, 379, 495, 573, 950, 1645
BstNI	CCWGG	3 cut(s)	7, 1863, 2106
BstNSI	RCATGY	5 cut(s)	466, 1482, 1531, 1804, 1903
BstSCI	CCNGG	8 cut(s)	5, 324, 659, 1747, 1756, 1757, 1861, 2104
BstSFI	CTRYAG	2 cut(s)	768, 1867
BstSLI	GKGCMC	1 cut(s)	862
BstUI	CGCG	2 cut(s)	389, 570
BstV1I	GCAGC	3 cut(s)	1202, 1223, 1853
BstV2I	GAAGAC	1 cut(s)	2103
BstX2I	RGATCY	2 cut(s)	105, 2139
BstYI	RGATCY	2 cut(s)	105, 2139
Bsu36I	CCTNAGG	1 cut(s)	2117
BsuI	GTATCC	1 cut(s)	1982
BsuRI	GGCC	4 cut(s)	86, 318, 359, 1023
BtgI	CCRYGG	1 cut(s)	568
BtgZI	GCGATG	2 cut(s)	504, 602
BtsCI	GGATG	8 cut(s)	68, 246, 586, 657, 931, 1245, 1514, 1924
BtsI	GCAGTG	1 cut(s)	1270
BtsIMutI	CAGTG	3 cut(s)	352, 1270, 2068
Cac8I	GCNNGC	7 cut(s)	361, 496, 889, 946, 969, 1166, 1573
CaiI	CAGNNNCTG	1 cut(s)	177
CfoI	GCGC	3 cut(s)	286, 365, 545
Cfr13I	GGNCC	5 cut(s)	85, 316, 397, 1021, 1053
Cfr42I	CCGCGG	1 cut(s)	571
Cfr9I	CCCGGG	1 cut(s)	1757
Csp6I	GTAC	2 cut(s)	690, 2001
CviQI	GTAC	2 cut(s)	690, 2001
DdeI	CTNAG	5 cut(s)	50, 519, 1244, 1676, 2117
DpnI	GATC	5 cut(s)	107, 407, 821, 1628, 2141
DpnII	GATC	5 cut(s)	105, 405, 819, 1626, 2139
DraI	TTTAAA	1 cut(s)	2233
Eam1104I	CTCTTC	4 cut(s)	344, 1739, 1832, 2185
EarI	CTCTTC	4 cut(s)	344, 1739, 1832, 2185
Ecl136II	GAGCTC	2 cut(s)	1680, 1968
Eco130I	CCWWGG	2 cut(s)	1024, 1395
Eco147I	AGGCCT	1 cut(s)	359
Eco24I	GRGCYC	2 cut(s)	1682, 1970
Eco31I	GGTCTC	1 cut(s)	125
Eco47I	GGWCC	2 cut(s)	397, 1053
Eco47III	AGCGCT	1 cut(s)	544
Eco53kI	GAGCTC	2 cut(s)	1680, 1968
Eco57I	CTGAAG	2 cut(s)	1460, 1830
Eco81I	CCTNAGG	1 cut(s)	2117
Eco88I	CYCGRG	3 cut(s)	312, 906, 1757
EcoICRI	GAGCTC	2 cut(s)	1680, 1968
EcoNI	CCTNNNNNAGG	1 cut(s)	768
EcoO109I	RGGNCCY	1 cut(s)	316
EcoRI	GAATTC	1 cut(s)	1880
EcoRII	CCWGG	3 cut(s)	5, 1861, 2104
EcoT14I	CCWWGG	2 cut(s)	1024, 1395
EcoT22I	ATGCAT	1 cut(s)	1386
EcoT38I	GRGCYC	2 cut(s)	1682, 1970
ErhI	CCWWGG	2 cut(s)	1024, 1395
FalI	AAGNNNNNCTT	2 cut(s)	1718, 1750
FauI	CCCGC	3 cut(s)	563, 819, 1286
FauNDI	CATATG	1 cut(s)	1419
FbaI	TGATCA	2 cut(s)	819, 1626
FblI	GTMKAC	1 cut(s)	1718
Fnu4HI	GCNGC	4 cut(s)	568, 1191, 1212, 1867
FokI	GGATG	8 cut(s)	55, 233, 593, 664, 938, 1252, 1521, 1911
FriOI	GRGCYC	2 cut(s)	1682, 1970
Fsp4HI	GCNGC	4 cut(s)	568, 1191, 1212, 1867
FspBI	CTAG	5 cut(s)	687, 744, 753, 1068, 1338
GlaI	GCGC	3 cut(s)	285, 364, 544
GluI	GCNGC	4 cut(s)	568, 1191, 1212, 1867
GsuI	CTGGAG	1 cut(s)	2088
HaeII	RGCGCY	1 cut(s)	546
HaeIII	GGCC	4 cut(s)	86, 318, 359, 1023
HapII	CCGG	7 cut(s)	326, 366, 481, 660, 1748, 1758, 2137
HhaI	GCGC	3 cut(s)	286, 365, 545
Hin6I	GCGC	3 cut(s)	284, 363, 543
HinP1I	GCGC	3 cut(s)	284, 363, 543
HinfI	GANTC	4 cut(s)	434, 805, 1715, 1840
HpaII	CCGG	7 cut(s)	326, 366, 481, 660, 1748, 1758, 2137
HphI	GGTGA	7 cut(s)	133, 614, 929, 970, 1453, 2134, 2159
Hpy166II	GTNNAC	8 cut(s)	460, 860, 988, 1436, 1693, 1719, 1806, 1897
Hpy188I	TCNGA	8 cut(s)	28, 708, 804, 841, 1232, 1972, 2094, 2207
Hpy188III	TCNNGA	6 cut(s)	112, 906, 1630, 1885, 1986, 2137
Hpy8I	GTNNAC	8 cut(s)	460, 860, 988, 1436, 1693, 1719, 1806, 1897
Hpy99I	CGWCG	1 cut(s)	188
HpyAV	CCTTC	6 cut(s)	244, 1081, 1201, 1227, 1499, 2180
HpyCH4III	ACNGT	5 cut(s)	694, 1045, 1493, 1544, 2063
HpyCH4IV	ACGT	2 cut(s)	893, 1893
HpyF10VI	GCNNNNNNNGC	6 cut(s)	92, 379, 495, 573, 950, 1645
HpyF3I	CTNAG	5 cut(s)	50, 519, 1244, 1676, 2117
HpySE526I	ACGT	2 cut(s)	893, 1893
HspAI	GCGC	3 cut(s)	284, 363, 543
Kpn2I	TCCGGA	1 cut(s)	2136
Ksp22I	TGATCA	2 cut(s)	819, 1626
KspI	CCGCGG	1 cut(s)	571
Kzo9I	GATC	5 cut(s)	105, 405, 819, 1626, 2139
LguI	GCTCTTC	1 cut(s)	1739
LmnI	GCTCC	5 cut(s)	156, 1105, 1138, 1667, 2041
Lsp1109I	GCAGC	3 cut(s)	1202, 1223, 1853
LweI	GCATC	6 cut(s)	481, 702, 1110, 1230, 1413, 1642
MaeI	CTAG	5 cut(s)	687, 744, 753, 1068, 1338
MaeII	ACGT	2 cut(s)	893, 1893
MaeIII	GTNAC	5 cut(s)	476, 958, 1579, 1702, 2057
MalI	GATC	5 cut(s)	107, 407, 821, 1628, 2141
MbiI	CCGCTC	1 cut(s)	1371
MboI	GATC	5 cut(s)	105, 405, 819, 1626, 2139
MflI	RGATCY	2 cut(s)	105, 2139
MhlI	GDGCHC	3 cut(s)	862, 1682, 1970
MlyI	GAGTC	2 cut(s)	1724, 1849
MmeI	TCCRAC	2 cut(s)	759, 1853
Mph1103I	ATGCAT	1 cut(s)	1386
MroI	TCCGGA	1 cut(s)	2136
MroXI	GAANNNNTTC	1 cut(s)	1733
MseI	TTAA	7 cut(s)	59, 471, 1017, 1196, 1521, 2127, 2232
MslI	CAYNNNNRTG	1 cut(s)	1698
MspA1I	CMGCKG	1 cut(s)	570
MspI	CCGG	7 cut(s)	326, 366, 481, 660, 1748, 1758, 2137
MspR9I	CCNGG	8 cut(s)	7, 326, 661, 1749, 1758, 1759, 1863, 2106
MvaI	CCWGG	3 cut(s)	7, 1863, 2106
MvnI	CGCG	2 cut(s)	389, 570
MwoI	GCNNNNNNNGC	6 cut(s)	92, 379, 495, 573, 950, 1645
NciI	CCSGG	5 cut(s)	326, 661, 1749, 1758, 1759
NdeI	CATATG	1 cut(s)	1419
NdeII	GATC	5 cut(s)	105, 405, 819, 1626, 2139
NlaIV	GGNNCC	2 cut(s)	317, 1140
NmeAIII	GCCGAG	1 cut(s)	1291
NmuCI	GTSAC	5 cut(s)	476, 958, 1579, 1702, 2057
NsiI	ATGCAT	1 cut(s)	1386
NspI	RCATGY	5 cut(s)	466, 1482, 1531, 1804, 1903
PaeR7I	CTCGAG	1 cut(s)	906
PceI	AGGCCT	1 cut(s)	359
PciI	ACATGT	1 cut(s)	462
PciSI	GCTCTTC	1 cut(s)	1739
PcsI	WCGNNNNNNNCGW	1 cut(s)	386
PdmI	GAANNNNTTC	1 cut(s)	1733
PfeI	GAWTC	2 cut(s)	434, 805
PflMI	CCANNNNNTGG	1 cut(s)	1030
PkrI	GCNGC	4 cut(s)	569, 1192, 1213, 1868
PleI	GAGTC	2 cut(s)	1723, 1848
PpsI	GAGTC	2 cut(s)	1723, 1848
PscI	ACATGT	1 cut(s)	462
Psp124BI	GAGCTC	2 cut(s)	1682, 1970
Psp1406I	AACGTT	1 cut(s)	1893
Psp6I	CCWGG	3 cut(s)	5, 1861, 2104
PspGI	CCWGG	3 cut(s)	5, 1861, 2104
PspN4I	GGNNCC	2 cut(s)	317, 1140
PspPI	GGNCC	5 cut(s)	85, 316, 397, 1021, 1053
PstI	CTGCAG	1 cut(s)	1871
PstNI	CAGNNNCTG	1 cut(s)	177
PsuI	RGATCY	2 cut(s)	105, 2139
RsaI	GTAC	2 cut(s)	691, 2002
RsaNI	GTAC	2 cut(s)	690, 2001
RseI	CAYNNNNRTG	1 cut(s)	1698
SacI	GAGCTC	2 cut(s)	1682, 1970
SacII	CCGCGG	1 cut(s)	571
SapI	GCTCTTC	1 cut(s)	1739
SaqAI	TTAA	7 cut(s)	59, 471, 1017, 1196, 1521, 2127, 2232
SatI	GCNGC	4 cut(s)	568, 1191, 1212, 1867
Sau3AI	GATC	5 cut(s)	105, 405, 819, 1626, 2139
Sau96I	GGNCC	5 cut(s)	85, 316, 397, 1021, 1053
ScaI	AGTACT	1 cut(s)	2002
SchI	GAGTC	2 cut(s)	1724, 1849
ScrFI	CCNGG	8 cut(s)	7, 326, 661, 1749, 1758, 1759, 1863, 2106
SduI	GDGCHC	3 cut(s)	862, 1682, 1970
SfaNI	GCATC	6 cut(s)	481, 702, 1110, 1230, 1413, 1642
SfcI	CTRYAG	2 cut(s)	768, 1867
Sfr274I	CTCGAG	1 cut(s)	906
Sfr303I	CCGCGG	1 cut(s)	571
SgrBI	CCGCGG	1 cut(s)	571
SinI	GGWCC	2 cut(s)	397, 1053
SlaI	CTCGAG	1 cut(s)	906
SmaI	CCCGGG	1 cut(s)	1759
SmiMI	CAYNNNNRTG	1 cut(s)	1698
SmlI	CTYRAG	4 cut(s)	110, 906, 998, 1849
SmoI	CTYRAG	4 cut(s)	110, 906, 998, 1849
SseBI	AGGCCT	1 cut(s)	359
SsiI	CCGC	6 cut(s)	387, 568, 570, 826, 1293, 1371
SspI	AATATT	1 cut(s)	1186
SspMI	CTAG	5 cut(s)	687, 744, 753, 1068, 1338
SstI	GAGCTC	2 cut(s)	1682, 1970
StuI	AGGCCT	1 cut(s)	359
StyD4I	CCNGG	8 cut(s)	5, 324, 659, 1747, 1756, 1757, 1861, 2104
StyI	CCWWGG	2 cut(s)	1024, 1395
TaaI	ACNGT	5 cut(s)	694, 1045, 1493, 1544, 2063
TaiI	ACGT	2 cut(s)	896, 1896
TaqI	TCGA	4 cut(s)	186, 867, 907, 1555
TaqII	GACCGA	1 cut(s)	1580
TatI	WGTACW	1 cut(s)	2000
TauI	GCSGC	1 cut(s)	570
TfiI	GAWTC	2 cut(s)	434, 805
Tru1I	TTAA	7 cut(s)	59, 471, 1017, 1196, 1521, 2127, 2232
Tru9I	TTAA	7 cut(s)	59, 471, 1017, 1196, 1521, 2127, 2232
TscAI	CASTG	3 cut(s)	352, 1270, 2068
TseFI	GTSAC	5 cut(s)	476, 958, 1579, 1702, 2057
TseI	GCWGC	3 cut(s)	1190, 1211, 1866
Tsp45I	GTSAC	5 cut(s)	476, 958, 1579, 1702, 2057
TspDTI	ATGAA	9 cut(s)	797, 942, 997, 1406, 1850, 1949, 1991, 2161, 2213
TspGWI	ACGGA	1 cut(s)	1961
TspMI	CCCGGG	1 cut(s)	1757
TspRI	CASTG	3 cut(s)	352, 1270, 2068
Van91I	CCANNNNNTGG	1 cut(s)	1030
VneI	GTGCAC	1 cut(s)	858
VpaK11BI	GGWCC	2 cut(s)	397, 1053
XagI	CCTNNNNNAGG	1 cut(s)	768
XapI	RAATTY	3 cut(s)	1342, 1880, 2168
XceI	RCATGY	5 cut(s)	466, 1482, 1531, 1804, 1903
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1402
XhoI	CTCGAG	1 cut(s)	906
XmaI	CCCGGG	1 cut(s)	1757
XmiI	GTMKAC	1 cut(s)	1718
XmnI	GAANNNNTTC	1 cut(s)	1733
XspI	CTAG	5 cut(s)	687, 744, 753, 1068, 1338
ZrmI	AGTACT	1 cut(s)	2002
Zsp2I	ATGCAT	1 cut(s)	1386

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.