Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000114.1

Orthogroup ID

OG0016680

Physical Location & Seq

Genomic Coordinates Forward (+)

119308 .. 121575

Gene Structure 2268 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000114.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

atgacccggcaagttctcaatctctctgaccatttgcttcccaaactcgtccacttgttaaacccctcatcttccttatcacaggcccaacaagcccatgcccagattctgaaaacaggtctctccaattacaccaatctcaccaccaaactcctttccctctacgccaacaccctctgctttgcagaagccaaactcgtcctcgattcgatcccacaccccaacttgttctctttctccaccctcattcatgccttctcaaagctcaatagcttcggcaatgcacttgccttgttctcccaaatgttatctcggggcctcgccccggatagcttcctcttccccagtgtcgtcaaggcctgtgccgggttgcaatcttcgcagtccgcgaaacaggtccatgcgatttcctttgcttccgggttcggtttcgattcgtttgtgcaatcgtctttggtgcacatgtatatcaaatgtgaccgaatgagggatgcacagaaggtgtttgatagagtgcctgagagagatgtgattatttacagtgctttgatttctgggtattctcgccgcgggtgtgttgatgacgccctgaagcttttagactcaatgaggggtttgggttttgagccaaatgtggtgttgtggaatgggatgattgccgggtttaggcagagcaagttgtatgctagtacagttgccgtgcttcagaaaatgcattcggaaggatttgaacccgatggctctagtatttctagtgttcttcctgctgtaggggacttggggggtttagacgttgggattcagattcatggctatgtgatcaagcggggactaaagtcggacaagtgtgttgttagtgcacttgttgatatgtatgggaagtgtgcctgcacgtcggagatgtctcgagttgttggtgaaatggaggaaatagatgttggtgcttgcaatgctttagttacagggcttgcccgaaatggtctcgttgacaatgcactggaggtgttcaggcaatttaagggcaaaggagtggaactcaatattgtgtcttggacctccataattgctagcggttcccaaaatgggaaggatatggaggctttggagctttttagagagatgcagattgagggtgtggagccaaactctatcactatttcttgcttgcttccggcttgtggcaatattgcagccttaatgcatgggaaggcagcccattgtttcgctctcaggagggggatgcttagtgatgtgtatgtgggcagtgcattgattgatatgtatgcaaactgcggcaaaatccaattatctcgactttgttttgataaaatgcccactaggaatttggtatgctggaatgcagttatgagcggctatgcaatgcatggaaaagctaaggaaactatggagatctttcgtatgatgcagaggagtggacagaagcccgatatcatcagcttcacctgtttattgtctgcatgcagccagaacggtctaacagaagatggatggtattattttaacagcatgtcaaaagaacacggtatagaagcccagatagaacattacgcttgcatggttacgctacttggtcgtgctggaaaacttgatgaggcttattccatgatcaagaaaatgccatttgaacctgatgcttgtgtttggggagctttgctaagttcttgtagagttcacaacaatgtgactttaggggagtctactgcaaagaagctcttcaatttagaaccggaaaatcctgggaactacattctgttgtccaatatttatgcttcgaagggcatgtggactgaagtagatagagtgagagatacgatgaagagtctgggattgaggaagaaccctggctgcagttggatcgaattcaagaacaaagttcacatgcttcttgtaggagacaaagcacatcctcaaatgaaccaaattacggaaaagttgaacagattgagctcagagatgaagagatcaggctacttccccgatacccactttgtattgcaagatgtggaagaacaagagaaggagcagattttgtgtggacacagtgagaaattggcagtagtgttggggcttctgaacactcctccagggtcttcccttagggtaattaagaacctcaggatctgtggtgattgtcattctgttatcaaattcatatccagcttggaagggagagagatttcagtcagagacaccaatcgctttcatcattttaaagatggggtttgttcttgtggggattactggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

755

Amino Acids

83.31

Weight (kDa)

8.06

Isoelectric Point (pI)

45.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016680)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20230
fragaria_vesca	FvH4_2g38000
malus_domestica	MD15G1007100.v1.1
prunus_persica	Prupe.1G360000_v2.0.a1
pyrus_communis	pycom15g00570
rosa_chinensis	RchiOBHm_Chr6g0303611
rosa_laevigata	RLG00000011068
rosa_multiflora	Rmu_ssc0000114.1_g000022
rosa_roxburghii	Rroxscaffold_7G00164580
rosa_rugosa	Rorug06G0322800
rosa_samantha	Rh6AG437300 Rh6BG466000 Rh6DG436000
rosa_wichuraiana	Rw6G037850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1371
AccI	GTMKAC	1 cut(s)	1718
AccII	CGCG	2 cut(s)	389, 570
AciI	CCGC	7 cut(s)	387, 568, 570, 826, 1071, 1293, 1371
AclWI	GGATC	3 cut(s)	205, 1883, 2147
AcsI	RAATTY	3 cut(s)	1342, 1880, 2168
AcuI	CTGAAG	3 cut(s)	611, 689, 1830
AcyI	GRCGYC	1 cut(s)	585
AfaI	GTAC	1 cut(s)	691
AfiI	CCNNNNNNNGG	8 cut(s)	325, 366, 487, 666, 770, 1083, 1178, 1945
AflIII	ACRYGT	1 cut(s)	462
AgsI	TTSAA	5 cut(s)	731, 1646, 1738, 1885, 1957
AjiI	CACGTC	1 cut(s)	894
AjnI	CCWGG	3 cut(s)	1756, 1861, 2104
AjuI	GAANNNNNNNTTGG	2 cut(s)	921, 953
Alw21I	GWGCWC	3 cut(s)	462, 862, 1970
Alw26I	GTCTC	5 cut(s)	125, 909, 986, 1908, 2202
Alw44I	GTGCAC	2 cut(s)	458, 858
AlwI	GGATC	3 cut(s)	205, 1883, 2147
AlwNI	CAGNNNCTG	2 cut(s)	109, 2142
Ama87I	CYCGRG	2 cut(s)	312, 906
AoxI	GGCC	3 cut(s)	84, 316, 357
ApaLI	GTGCAC	2 cut(s)	458, 858
ApeKI	GCWGC	4 cut(s)	1190, 1211, 1482, 1866
ApoI	RAATTY	3 cut(s)	1342, 1880, 2168
Asp700I	GAANNNNTTC	1 cut(s)	1733
AspS9I	GGNCC	4 cut(s)	85, 316, 397, 1053
AsuC2I	CCSGG	5 cut(s)	7, 326, 367, 421, 661
AsuHPI	GGTGA	4 cut(s)	133, 929, 1453, 2159
AsuII	TTCGAA	1 cut(s)	1793
AsuNHI	GCTAGC	1 cut(s)	1067
AvaI	CYCGRG	2 cut(s)	312, 906
AvaII	GGWCC	2 cut(s)	397, 1053
AxyI	CCTNAGG	2 cut(s)	2117, 2135
BaeGI	GKGCMC	2 cut(s)	462, 862
BanII	GRGCYC	1 cut(s)	1970
BbsI	GAAGAC	1 cut(s)	2103
Bbv12I	GWGCWC	3 cut(s)	462, 862, 1970
BbvI	GCAGC	4 cut(s)	1202, 1223, 1494, 1853
BccI	CCATC	4 cut(s)	731, 1499, 1503, 2231
BceAI	ACGGC	1 cut(s)	683
BcgI	CGANNNNNNTGC	2 cut(s)	1858, 1892
BciT130I	CCWGG	3 cut(s)	1758, 1863, 2106
BclI	TGATCA	2 cut(s)	819, 1626
BcnI	CCSGG	5 cut(s)	7, 326, 367, 421, 661
BcoDI	GTCTC	5 cut(s)	125, 909, 986, 1908, 2202
BfaI	CTAG	5 cut(s)	687, 744, 753, 1068, 1338
BfmI	CTRYAG	2 cut(s)	768, 1867
BglII	AGATCT	1 cut(s)	1410
BisI	GCNGC	7 cut(s)	568, 1191, 1212, 1294, 1372, 1483, 1867
BlsI	GCNGC	7 cut(s)	569, 1192, 1213, 1295, 1373, 1484, 1868
Bme1390I	CCNGG	8 cut(s)	7, 326, 367, 421, 661, 1758, 1863, 2106
Bme18I	GGWCC	2 cut(s)	397, 1053
BmeT110I	CYCGRG	2 cut(s)	312, 906
BmgBI	CACGTC	1 cut(s)	894
BmgT120I	GGNCC	4 cut(s)	85, 316, 397, 1053
BmiI	GGNNCC	3 cut(s)	317, 1075, 1140
BmrFI	CCNGG	8 cut(s)	7, 326, 367, 421, 661, 1758, 1863, 2106
BmrI	ACTGGG	1 cut(s)	339
BmsI	GCATC	5 cut(s)	481, 1110, 1230, 1413, 1642
BmtI	GCTAGC	1 cut(s)	1071
BmuI	ACTGGG	1 cut(s)	339
BoxI	GACNNNNGTC	1 cut(s)	835
BpiI	GAAGAC	1 cut(s)	2103
BplI	GAGNNNNNCTC	4 cut(s)	1020, 1052, 1130, 1162
BpmI	CTGGAG	2 cut(s)	1019, 2088
Bpu10I	CCTNAGC	1 cut(s)	1395
Bpu14I	TTCGAA	1 cut(s)	1793
BpuMI	CCSGG	5 cut(s)	7, 326, 367, 421, 661
BsaHI	GRCGYC	1 cut(s)	585
BsaI	GGTCTC	2 cut(s)	125, 986
BsaJI	CCNNGG	5 cut(s)	324, 568, 1757, 1861, 2105
BsaWI	WCCGGW	1 cut(s)	1747
Bsc4I	CCNNNNNNNGG	8 cut(s)	325, 366, 487, 666, 770, 1083, 1178, 1945
Bse1I	ACTGG	3 cut(s)	345, 1002, 2267
Bse21I	CCTNAGG	2 cut(s)	2117, 2135
Bse3DI	GCAATG	3 cut(s)	286, 955, 1386
BseBI	CCWGG	3 cut(s)	1758, 1863, 2106
BseDI	CCNNGG	5 cut(s)	324, 568, 1757, 1861, 2105
BseGI	GGATG	5 cut(s)	496, 657, 1245, 1514, 1924
BseLI	CCNNNNNNNGG	8 cut(s)	325, 366, 487, 666, 770, 1083, 1178, 1945
BseMI	GCAATG	3 cut(s)	286, 955, 1386
BseMII	CTCAG	4 cut(s)	510, 1243, 1983, 2149
BseNI	ACTGG	3 cut(s)	345, 1002, 2267
BseRI	GAGGAG	2 cut(s)	1444, 2091
BseSI	GKGCMC	2 cut(s)	462, 862
BseXI	GCAGC	4 cut(s)	1202, 1223, 1494, 1853
BsgI	GTGCAG	1 cut(s)	874
Bsh1236I	CGCG	2 cut(s)	389, 570
BshFI	GGCC	3 cut(s)	86, 318, 359
BsiHKAI	GWGCWC	3 cut(s)	462, 862, 1970
BsiHKCI	CYCGRG	2 cut(s)	312, 906
BsiSI	CCGG	7 cut(s)	7, 326, 366, 420, 660, 1172, 1748
BslFI	GGGAC	2 cut(s)	788, 843
BslI	CCNNNNNNNGG	8 cut(s)	325, 366, 487, 666, 770, 1083, 1178, 1945
BsmAI	GTCTC	5 cut(s)	125, 909, 986, 1908, 2202
BsmFI	GGGAC	2 cut(s)	788, 843
BsmI	GAATGC	2 cut(s)	715, 1363
BsnI	GGCC	3 cut(s)	86, 318, 359
Bso31I	GGTCTC	2 cut(s)	125, 986
BsoBI	CYCGRG	2 cut(s)	312, 906
Bsp119I	TTCGAA	1 cut(s)	1793
Bsp1286I	GDGCHC	3 cut(s)	462, 862, 1970
Bsp143I	GATC	7 cut(s)	210, 819, 1410, 1626, 1875, 1982, 2139
BspACI	CCGC	7 cut(s)	387, 568, 570, 826, 1071, 1293, 1371
BspANI	GGCC	3 cut(s)	86, 318, 359
BspCNI	CTCAG	4 cut(s)	511, 1242, 1982, 2148
BspFNI	CGCG	2 cut(s)	389, 570
BspLI	GGNNCC	3 cut(s)	317, 1075, 1140
BspMAI	CTGCAG	1 cut(s)	1871
BspOI	GCTAGC	1 cut(s)	1071
BspPI	GGATC	3 cut(s)	205, 1883, 2147
BspQI	GCTCTTC	1 cut(s)	1739
BspT104I	TTCGAA	1 cut(s)	1793
BspTNI	GGTCTC	2 cut(s)	125, 986
BsrBI	CCGCTC	1 cut(s)	1371
BsrDI	GCAATG	3 cut(s)	286, 955, 1386
BsrI	ACTGG	3 cut(s)	345, 1002, 2267
BssECI	CCNNGG	5 cut(s)	324, 568, 1757, 1861, 2105
BssMI	GATC	7 cut(s)	210, 819, 1410, 1626, 1875, 1982, 2139
BssNI	GRCGYC	1 cut(s)	585
Bst2UI	CCWGG	3 cut(s)	1758, 1863, 2106
Bst4CI	ACNGT	5 cut(s)	542, 694, 1493, 1544, 2063
Bst6I	CTCTTC	4 cut(s)	344, 1739, 1832, 1973
BstACI	GRCGYC	1 cut(s)	585
BstBI	TTCGAA	1 cut(s)	1793
BstC8I	GCNNGC	7 cut(s)	889, 946, 969, 1069, 1166, 1480, 1573
BstDEI	CTNAG	8 cut(s)	519, 1229, 1244, 1395, 1676, 1969, 2117, 2135
BstDSI	CCRYGG	1 cut(s)	568
BstENI	CCTNNNNNAGG	1 cut(s)	768
BstF5I	GGATG	5 cut(s)	496, 657, 1245, 1514, 1924
BstFNI	CGCG	2 cut(s)	389, 570
BstKTI	GATC	7 cut(s)	213, 822, 1413, 1629, 1878, 1985, 2142
BstMAI	GTCTC	5 cut(s)	125, 909, 986, 1908, 2202
BstMBI	GATC	7 cut(s)	210, 819, 1410, 1626, 1875, 1982, 2139
BstMWI	GCNNNNNNNGC	3 cut(s)	92, 379, 950
BstNI	CCWGG	3 cut(s)	1758, 1863, 2106
BstNSI	RCATGY	5 cut(s)	466, 1482, 1531, 1804, 1903
BstPAI	GACNNNNGTC	1 cut(s)	835
BstSCI	CCNGG	8 cut(s)	5, 324, 365, 419, 659, 1756, 1861, 2104
BstSFI	CTRYAG	2 cut(s)	768, 1867
BstSLI	GKGCMC	2 cut(s)	462, 862
BstUI	CGCG	2 cut(s)	389, 570
BstV1I	GCAGC	4 cut(s)	1202, 1223, 1494, 1853
BstV2I	GAAGAC	1 cut(s)	2103
BstX2I	RGATCY	2 cut(s)	1410, 2139
BstYI	RGATCY	2 cut(s)	1410, 2139
Bsu36I	CCTNAGG	2 cut(s)	2117, 2135
BsuRI	GGCC	3 cut(s)	86, 318, 359
BtgI	CCRYGG	1 cut(s)	568
BtrI	CACGTC	1 cut(s)	894
BtsCI	GGATG	5 cut(s)	496, 657, 1245, 1514, 1924
BtsI	GCAGTG	1 cut(s)	1270
BtsIMutI	CAGTG	5 cut(s)	352, 547, 995, 1270, 2068
Cac8I	GCNNGC	7 cut(s)	889, 946, 969, 1069, 1166, 1480, 1573
CaiI	CAGNNNCTG	2 cut(s)	109, 2142
Cfr13I	GGNCC	4 cut(s)	85, 316, 397, 1053
Cfr42I	CCGCGG	1 cut(s)	571
CseI	GACGC	1 cut(s)	593
Csp6I	GTAC	1 cut(s)	690
CviQI	GTAC	1 cut(s)	690
DdeI	CTNAG	8 cut(s)	519, 1229, 1244, 1395, 1676, 1969, 2117, 2135
DpnI	GATC	7 cut(s)	212, 821, 1412, 1628, 1877, 1984, 2141
DpnII	GATC	7 cut(s)	210, 819, 1410, 1626, 1875, 1982, 2139
DraI	TTTAAA	1 cut(s)	2233
Eam1104I	CTCTTC	4 cut(s)	344, 1739, 1832, 1973
EarI	CTCTTC	4 cut(s)	344, 1739, 1832, 1973
Ecl136II	GAGCTC	1 cut(s)	1968
Eco147I	AGGCCT	1 cut(s)	359
Eco24I	GRGCYC	1 cut(s)	1970
Eco31I	GGTCTC	2 cut(s)	125, 986
Eco32I	GATATC	1 cut(s)	1450
Eco47I	GGWCC	2 cut(s)	397, 1053
Eco53kI	GAGCTC	1 cut(s)	1968
Eco57I	CTGAAG	3 cut(s)	611, 689, 1830
Eco81I	CCTNAGG	2 cut(s)	2117, 2135
Eco88I	CYCGRG	2 cut(s)	312, 906
EcoICRI	GAGCTC	1 cut(s)	1968
EcoNI	CCTNNNNNAGG	1 cut(s)	768
EcoO109I	RGGNCCY	1 cut(s)	316
EcoRI	GAATTC	1 cut(s)	1880
EcoRII	CCWGG	3 cut(s)	1756, 1861, 2104
EcoRV	GATATC	1 cut(s)	1450
EcoT22I	ATGCAT	3 cut(s)	717, 1203, 1386
EcoT38I	GRGCYC	1 cut(s)	1970
FalI	AAGNNNNNCTT	2 cut(s)	1718, 1750
FaqI	GGGAC	2 cut(s)	788, 843
FauI	CCCGC	2 cut(s)	563, 819
FbaI	TGATCA	2 cut(s)	819, 1626
FblI	GTMKAC	1 cut(s)	1718
Fnu4HI	GCNGC	7 cut(s)	568, 1191, 1212, 1294, 1372, 1483, 1867
FokI	GGATG	5 cut(s)	503, 664, 1252, 1521, 1911
FriOI	GRGCYC	1 cut(s)	1970
Fsp4HI	GCNGC	7 cut(s)	568, 1191, 1212, 1294, 1372, 1483, 1867
FspBI	CTAG	5 cut(s)	687, 744, 753, 1068, 1338
GluI	GCNGC	7 cut(s)	568, 1191, 1212, 1294, 1372, 1483, 1867
GsuI	CTGGAG	2 cut(s)	1019, 2088
HaeIII	GGCC	3 cut(s)	86, 318, 359
HapII	CCGG	7 cut(s)	7, 326, 366, 420, 660, 1172, 1748
HgaI	GACGC	1 cut(s)	593
Hin1I	GRCGYC	1 cut(s)	585
HincII	GTYRAC	1 cut(s)	988
HindII	GTYRAC	1 cut(s)	988
HindIII	AAGCTT	1 cut(s)	593
HinfI	GANTC	8 cut(s)	106, 206, 434, 602, 799, 805, 1715, 1840
HpaII	CCGG	7 cut(s)	7, 326, 366, 420, 660, 1172, 1748
HphI	GGTGA	4 cut(s)	133, 929, 1453, 2159
Hpy188III	TCNNGA	6 cut(s)	906, 1231, 1311, 1630, 1885, 2137
Hpy99I	CGWCG	1 cut(s)	898
HpyAV	CCTTC	8 cut(s)	265, 493, 716, 1081, 1201, 1789, 2032, 2180
HpyCH4III	ACNGT	5 cut(s)	542, 694, 1493, 1544, 2063
HpyCH4IV	ACGT	2 cut(s)	792, 893
HpyF10VI	GCNNNNNNNGC	3 cut(s)	92, 379, 950
HpyF3I	CTNAG	8 cut(s)	519, 1229, 1244, 1395, 1676, 1969, 2117, 2135
HpySE526I	ACGT	2 cut(s)	792, 893
Hsp92I	GRCGYC	1 cut(s)	585
Ksp22I	TGATCA	2 cut(s)	819, 1626
KspI	CCGCGG	1 cut(s)	571
Kzo9I	GATC	7 cut(s)	210, 819, 1410, 1626, 1875, 1982, 2139
LguI	GCTCTTC	1 cut(s)	1739
LmnI	GCTCC	4 cut(s)	1105, 1138, 1667, 2041
Lsp1109I	GCAGC	4 cut(s)	1202, 1223, 1494, 1853
LweI	GCATC	5 cut(s)	481, 1110, 1230, 1413, 1642
MaeI	CTAG	5 cut(s)	687, 744, 753, 1068, 1338
MaeII	ACGT	2 cut(s)	792, 893
MaeIII	GTNAC	4 cut(s)	476, 958, 1579, 1702
MalI	GATC	7 cut(s)	212, 821, 1412, 1628, 1877, 1984, 2141
MbiI	CCGCTC	1 cut(s)	1371
MboI	GATC	7 cut(s)	210, 819, 1410, 1626, 1875, 1982, 2139
MflI	RGATCY	2 cut(s)	1410, 2139
MhlI	GDGCHC	3 cut(s)	462, 862, 1970
MlyI	GAGTC	3 cut(s)	596, 1724, 1849
MmeI	TCCRAC	3 cut(s)	819, 876, 1853
Mph1103I	ATGCAT	3 cut(s)	717, 1203, 1386
MroXI	GAANNNNTTC	1 cut(s)	1733
MseI	TTAA	6 cut(s)	59, 1017, 1196, 1521, 2127, 2232
MslI	CAYNNNNRTG	2 cut(s)	813, 1698
MspA1I	CMGCKG	1 cut(s)	570
MspI	CCGG	7 cut(s)	7, 326, 366, 420, 660, 1172, 1748
MspR9I	CCNGG	8 cut(s)	7, 326, 367, 421, 661, 1758, 1863, 2106
Mva1269I	GAATGC	2 cut(s)	715, 1363
MvaI	CCWGG	3 cut(s)	1758, 1863, 2106
MvnI	CGCG	2 cut(s)	389, 570
MwoI	GCNNNNNNNGC	3 cut(s)	92, 379, 950
NciI	CCSGG	5 cut(s)	7, 326, 367, 421, 661
NdeII	GATC	7 cut(s)	210, 819, 1410, 1626, 1875, 1982, 2139
NheI	GCTAGC	1 cut(s)	1067
NlaIV	GGNNCC	3 cut(s)	317, 1075, 1140
NmuCI	GTSAC	2 cut(s)	476, 1702
NsiI	ATGCAT	3 cut(s)	717, 1203, 1386
NspI	RCATGY	5 cut(s)	466, 1482, 1531, 1804, 1903
NspV	TTCGAA	1 cut(s)	1793
PaeI	GCATGC	1 cut(s)	1482
PaeR7I	CTCGAG	1 cut(s)	906
PceI	AGGCCT	1 cut(s)	359
PciI	ACATGT	1 cut(s)	462
PciSI	GCTCTTC	1 cut(s)	1739
PcsI	WCGNNNNNNNCGW	1 cut(s)	386
PctI	GAATGC	2 cut(s)	715, 1363
PdmI	GAANNNNTTC	1 cut(s)	1733
PfeI	GAWTC	5 cut(s)	106, 206, 434, 799, 805
PkrI	GCNGC	7 cut(s)	569, 1192, 1213, 1295, 1373, 1484, 1868
PleI	GAGTC	3 cut(s)	596, 1723, 1848
PpsI	GAGTC	3 cut(s)	596, 1723, 1848
PscI	ACATGT	1 cut(s)	462
PshAI	GACNNNNGTC	1 cut(s)	835
Psp124BI	GAGCTC	1 cut(s)	1970
Psp6I	CCWGG	3 cut(s)	1756, 1861, 2104
PspGI	CCWGG	3 cut(s)	1756, 1861, 2104
PspN4I	GGNNCC	3 cut(s)	317, 1075, 1140
PspPI	GGNCC	4 cut(s)	85, 316, 397, 1053
PstI	CTGCAG	1 cut(s)	1871
PstNI	CAGNNNCTG	2 cut(s)	109, 2142
PsuI	RGATCY	2 cut(s)	1410, 2139
RsaI	GTAC	1 cut(s)	691
RsaNI	GTAC	1 cut(s)	690
RseI	CAYNNNNRTG	2 cut(s)	813, 1698
SacI	GAGCTC	1 cut(s)	1970
SacII	CCGCGG	1 cut(s)	571
SapI	GCTCTTC	1 cut(s)	1739
SaqAI	TTAA	6 cut(s)	59, 1017, 1196, 1521, 2127, 2232
SatI	GCNGC	7 cut(s)	568, 1191, 1212, 1294, 1372, 1483, 1867
Sau3AI	GATC	7 cut(s)	210, 819, 1410, 1626, 1875, 1982, 2139
Sau96I	GGNCC	4 cut(s)	85, 316, 397, 1053
SchI	GAGTC	3 cut(s)	596, 1724, 1849
ScrFI	CCNGG	8 cut(s)	7, 326, 367, 421, 661, 1758, 1863, 2106
SduI	GDGCHC	3 cut(s)	462, 862, 1970
SfaNI	GCATC	5 cut(s)	481, 1110, 1230, 1413, 1642
SfcI	CTRYAG	2 cut(s)	768, 1867
Sfr274I	CTCGAG	1 cut(s)	906
Sfr303I	CCGCGG	1 cut(s)	571
SfuI	TTCGAA	1 cut(s)	1793
SgrBI	CCGCGG	1 cut(s)	571
SinI	GGWCC	2 cut(s)	397, 1053
SlaI	CTCGAG	1 cut(s)	906
SmiMI	CAYNNNNRTG	2 cut(s)	813, 1698
SmlI	CTYRAG	1 cut(s)	906
SmoI	CTYRAG	1 cut(s)	906
SphI	GCATGC	1 cut(s)	1482
SseBI	AGGCCT	1 cut(s)	359
SsiI	CCGC	7 cut(s)	387, 568, 570, 826, 1071, 1293, 1371
SspI	AATATT	3 cut(s)	1042, 1186, 1783
SspMI	CTAG	5 cut(s)	687, 744, 753, 1068, 1338
SstI	GAGCTC	1 cut(s)	1970
StuI	AGGCCT	1 cut(s)	359
StyD4I	CCNGG	8 cut(s)	5, 324, 365, 419, 659, 1756, 1861, 2104
TaaI	ACNGT	5 cut(s)	542, 694, 1493, 1544, 2063
TaiI	ACGT	2 cut(s)	795, 896
TaqI	TCGA	7 cut(s)	204, 209, 432, 907, 1312, 1793, 1878
TaqII	GACCGA	1 cut(s)	495
TatI	WGTACW	1 cut(s)	689
TauI	GCSGC	3 cut(s)	570, 1296, 1374
TfiI	GAWTC	5 cut(s)	106, 206, 434, 799, 805
Tru1I	TTAA	6 cut(s)	59, 1017, 1196, 1521, 2127, 2232
Tru9I	TTAA	6 cut(s)	59, 1017, 1196, 1521, 2127, 2232
TscAI	CASTG	5 cut(s)	352, 547, 1002, 1270, 2068
TseFI	GTSAC	2 cut(s)	476, 1702
TseI	GCWGC	4 cut(s)	1190, 1211, 1482, 1866
Tsp45I	GTSAC	2 cut(s)	476, 1702
TspDTI	ATGAA	7 cut(s)	239, 797, 1850, 1949, 1991, 2161, 2213
TspGWI	ACGGA	1 cut(s)	1961
TspRI	CASTG	5 cut(s)	352, 547, 1002, 1270, 2068
VneI	GTGCAC	2 cut(s)	458, 858
VpaK11BI	GGWCC	2 cut(s)	397, 1053
XagI	CCTNNNNNAGG	1 cut(s)	768
XapI	RAATTY	3 cut(s)	1342, 1880, 2168
XceI	RCATGY	5 cut(s)	466, 1482, 1531, 1804, 1903
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1342
XhoI	CTCGAG	1 cut(s)	906
XmiI	GTMKAC	1 cut(s)	1718
XmnI	GAANNNNTTC	1 cut(s)	1733
XspI	CTAG	5 cut(s)	687, 744, 753, 1068, 1338
Zsp2I	ATGCAT	3 cut(s)	717, 1203, 1386

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.