Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0012830

Physical Location & Seq

Genomic Coordinates Forward (+)

27643784 .. 27650549

Gene Structure 6766 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g38180.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2373 bp

ATGATACTGGACGGAATCGTAGACGAGGACAAATGGCTGGCCGAAGGCATCGCCGGCATTCAGCACCACGCTTTCTACATGCATCGAGCTCTGGACGCGAACAATCTCAGAGACGCTCTCAAATACTCGGCTCAGATGCTCTCCGAGCTCCGAACCTCGAGGCTTTCGCCTCACAAGTACTACGAGCTCTATATGCGAGCTTTTGATGAGCTGAGGAAGCTGGAGATGTTCTTCAAGGACGAGAGCAGGCATGGCGTCTCGATCATTGATCTCTACGAGCTTGTTCAGCACGCCGGCAACATTCTACCGAGATTGTACCTCCTATGTACAGTAGGATCTGTGTACATTAAATCAAAGGAAGCACCTGCCAAGGACGTGCTTAAAGACCTTGTGGAAATGTGTCGAGCTGTTCAGCATCCGATTCGTGGGCTGTTTCTAAGGAGTTATCTTTCTCAAGTCAGTAGAGATAAGTTACCCGATCTTGGTTCCGAGTATGAAGGAGGTTCTGACACTGTTACCAATGCCGTAGATTTCGTGCTACAGAATTTTACAGAGATGAATAAGCTTTGGGTTCGAATGCAGTATCAGGGACCTGGTCGGGTGAGAGAGAAGCATGAAAAGGAAAGAAGCGAACTTCGTGATTTGGTTGGGAAAAATCTCCATGTTCTGAGTCAGATAGAGGGTGTGGAACTTCAAATGTACAAAGACACTGTTCTTCCCAGAGTATTAGAGCAGGTTATCAACTGTAAAGATGAGCTGGCGCAGTTTTATTTGATGGATTGCCTAATCCAGGTCTTTCCAGACGAGTATCACTTGCAGACACTAGAGACGTTATTGGGTGCTTGCCCCCAGCTTCAGCCAACAGTGGATGTCAAGACAGTATTATCTCAATTAATGGACAGGTTATCAAATTATGCTGCTTCAAGTACAGATGTATTACCTGAATTTCTTCAAGTTGAAGCTTTCACCAAATTAAGCAGTGCTATTGGAAGGGTGATAGAAGCTCAAGTTGACATGCCTATTGTTGGAGCCATATCTTTGTACGTCTCTCTTCTTACATTCACACTCCGTGTTCATCCTGATCGTCTAGATTATGTGGATCAAGTACTGGGAGCATGTGTTAGGAAGTTATCTGGATCCGCCAAGGTTGAAGACAAGAGAGCCATAAAGCAGGTTGTCGCACTATTAAGCGCTCCATTGGAAAAATACAATGACATTGTCACAGCTCTCACACTTTCTAATTATCCTCGAGTTATGGATCACCTTGATGATGGAACAAATAAAGTCATGGCAATGGTTATCATTCAAAGCATTATGAAAAACGACTCTTGTATCTCAACTGCTGATAAGGTGGAGGTATTGTTTGAATTAATCAAAGGGCTGATCAAGGATTTGGATGGTATTTCTGATGATGAGCTTGATGAAGAGGATTTTCATGATGAGCAAAATTCTGTTGCTCGCCTTATACACATGCTTTATAATGATGATCCAGAAGAAATGTTCAAGATCATATGTACGGTAAAGAAGCATATAATGAATGGAGGGCCAAAACGCTTACCTTTTACTGTTCCTCCTCTTGTATTTTCTACACTTGGGTTGGTTAGGCAACTGCAAGGCCAGGAAGGGGAGGTATTTGGAGAAGATGTGCCTGCCACACCGAAGACAATTTTTCAGTTTCTTAATCAGACTATTGAAGCTCTTTCCTCTATTCCGTCACCTGAACTGGCATTAAGGTTGTACTTACATTGTGCTGAGGCTGCCAATGACTGTGATCTTGAACCTGTTGCTTATGAATTCTTCACTCAGGCATTTGTACTATATGAAGAAGAAATTGCGGACTCCAAAGCTCAAGTGACTGCAATACATCTCATCATTGGGGCTCTTCAGAGGATGAATGTATTTGGTACTGAAAATAGGGATACCTTAACACACAAGGCAACAGGGTATTCTGCAAAACTTTTGAAGAAACCTGACCAATGTAGAGCGGTCTATGCATGTTCACACCTATTTTGGGTTGATGATCAGGATGGCGTTAAAGATGGAGAAAGGGTCTTGCTTTGTTTAAAGCGTGCGTTGAGAATTGCAAATGCTGCTCAACAAATGGCCAGTGTAACTCGGGGTAACAGTGGGCCAGTGACACTCTTTGTTGAAATACTAAACAAGTACCTCTACTTTTTTGAGAAAGGAAACCCCCAGATTACCAGTGCTGCAATTCAGGGATTGGTGGAGTTAATTACAAACGAGTTGCAAAGTGACTCTAGTAATGTGAAACCAACCTCTGATGCATTTTTCACCAGCACGTTGCGGTATATACAGTTCCAGAAACAGAAAGGTGGGGCAATGGGTGAAAAATATGCATCTATCAAGGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008565 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0016482 GO:0030904 GO:0031410 GO:0031982 GO:0032991 GO:0033036 GO:0034613 GO:0042147 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0097708 GO:0098796

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Vps35

Protein Analysis

791

Amino Acids

89.1

Weight (kDa)

5.35

Isoelectric Point (pI)

37.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Vps35	PF03635	12 - 754	1.4e-288	Vacuolar protein sorting-associated protein 35

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0012830)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75850 AT1G75850
fragaria_vesca	FvH4_2g38180 FvH4_2g38180
malus_domestica	MD15G1010200.v1.1
prunus_persica	Prupe.1G362700_v2.0.a1
pyrus_communis	pycom15g00840
rosa_chinensis	RchiOBHm_Chr6g0303301
rosa_laevigata	RLG00000011094
rosa_multiflora	Rmu_sc0006346.1_g000001 Rmu_sc0019430.1_g000001
rosa_roxburghii	Rroxscaffold_7G00164890
rosa_rugosa	Rorug06G0320200
rosa_samantha	Rh6AG434600 Rh6BG468500 Rh6CG446600 Rh6DG433300
rosa_wichuraiana	Rw6G037630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1479
AarI	CACCTGC	1 cut(s)	373
AbsI	CCTCGAGG	1 cut(s)	157
Acc36I	ACCTGC	3 cut(s)	373, 724, 1162
AccBSI	CCGCTC	1 cut(s)	1985
AccI	GTMKAC	1 cut(s)	21
AccII	CGCG	1 cut(s)	98
AciI	CCGC	4 cut(s)	1140, 1835, 1985, 2305
AclWI	GGATC	6 cut(s)	343, 1107, 1131, 1144, 1266, 1481
AcoI	YGGCCR	2 cut(s)	39, 2103
AcsI	RAATTY	4 cut(s)	544, 944, 1447, 1793
AcuI	CTGAAG	2 cut(s)	839, 1868
AcyI	GRCGYC	1 cut(s)	255
AdeI	CACNNNGTG	1 cut(s)	1070
AfeI	AGCGCT	1 cut(s)	1192
AfiI	CCNNNNNNNGG	6 cut(s)	425, 482, 790, 1025, 1624, 2011
AjiI	CACGTC	1 cut(s)	376
AjnI	CCWGG	3 cut(s)	592, 789, 1617
Alw21I	GWGCWC	3 cut(s)	91, 150, 189
Alw26I	GTCTC	4 cut(s)	105, 262, 821, 1051
AlwI	GGATC	6 cut(s)	343, 1107, 1131, 1144, 1266, 1481
Ama87I	CYCGRG	3 cut(s)	157, 1248, 2115
Aor51HI	AGCGCT	1 cut(s)	1192
AoxI	GGCC	5 cut(s)	39, 1544, 1615, 2103, 2129
ApeKI	GCWGC	4 cut(s)	917, 1757, 2090, 2207
ApoI	RAATTY	4 cut(s)	544, 944, 1447, 1793
AseI	ATTAAT	2 cut(s)	893, 1370
Asp700I	GAANNNNTTC	1 cut(s)	948
AspLEI	GCGC	2 cut(s)	763, 1193
AspS9I	GGNCC	3 cut(s)	590, 1544, 2129
AsuHPI	GGTGA	7 cut(s)	613, 958, 1006, 1253, 1707, 2284, 2357
AsuII	TTCGAA	1 cut(s)	574
AvaI	CYCGRG	3 cut(s)	157, 1248, 2115
AvaII	GGWCC	1 cut(s)	590
BaeI	ACNNNNGTAYC	2 cut(s)	1315, 1348
BalI	TGGCCA	1 cut(s)	2105
BamHI	GGATCC	1 cut(s)	1136
BanII	GRGCYC	4 cut(s)	91, 150, 189, 1882
BbsI	GAAGAC	2 cut(s)	1158, 1667
Bbv12I	GWGCWC	3 cut(s)	91, 150, 189
BbvCI	CCTCAGC	2 cut(s)	212, 1752
BbvI	GCAGC	4 cut(s)	904, 1744, 2077, 2194
BccI	CCATC	5 cut(s)	769, 1265, 1391, 2021, 2033
BceAI	ACGGC	1 cut(s)	509
BcgI	CGANNNNNNTGC	2 cut(s)	404, 438
BciT130I	CCWGG	3 cut(s)	594, 791, 1619
BciVI	GTATCC	1 cut(s)	1912
BclI	TGATCA	2 cut(s)	1383, 2020
BcoDI	GTCTC	4 cut(s)	105, 262, 821, 1051
BfaI	CTAG	3 cut(s)	824, 1088, 2259
BfmI	CTRYAG	1 cut(s)	539
BfoI	RGCGCY	1 cut(s)	1194
BfuAI	ACCTGC	3 cut(s)	373, 724, 1162
BfuI	GTATCC	1 cut(s)	1912
BisI	GCNGC	4 cut(s)	918, 1758, 2091, 2208
BlsI	GCNGC	4 cut(s)	919, 1759, 2092, 2209
BmcAI	AGTACT	2 cut(s)	179, 1107
Bme1390I	CCNGG	3 cut(s)	594, 791, 1619
Bme18I	GGWCC	1 cut(s)	590
BmeT110I	CYCGRG	3 cut(s)	157, 1248, 2115
BmgBI	CACGTC	1 cut(s)	376
BmgT120I	GGNCC	3 cut(s)	590, 1544, 2129
BmiI	GGNNCC	4 cut(s)	487, 591, 1030, 1138
BmrFI	CCNGG	3 cut(s)	594, 791, 1619
BmrI	ACTGGG	1 cut(s)	1118
BmsI	GCATC	6 cut(s)	57, 91, 126, 424, 2272, 2366
BmuI	ACTGGG	1 cut(s)	1118
BpiI	GAAGAC	2 cut(s)	1158, 1667
BplI	GAGNNNNNCTC	2 cut(s)	102, 134
BpmI	CTGGAG	1 cut(s)	242
Bpu10I	CCTNAGC	2 cut(s)	212, 1752
Bpu14I	TTCGAA	1 cut(s)	574
BpuEI	CTTGAG	3 cut(s)	438, 990, 1833
BsaHI	GRCGYC	1 cut(s)	255
BsaJI	CCNNGG	2 cut(s)	369, 1143
Bsc4I	CCNNNNNNNGG	6 cut(s)	425, 482, 790, 1025, 1624, 2011
Bse118I	RCCGGY	2 cut(s)	53, 293
Bse1I	ACTGG	6 cut(s)	12, 1113, 1728, 2106, 2132, 2202
Bse3DI	GCAATG	2 cut(s)	1299, 2346
BseBI	CCWGG	3 cut(s)	594, 791, 1619
BseDI	CCNNGG	2 cut(s)	369, 1143
BseGI	GGATG	6 cut(s)	415, 874, 1075, 1402, 1896, 2032
BseLI	CCNNNNNNNGG	6 cut(s)	425, 482, 790, 1025, 1624, 2011
BseMI	GCAATG	2 cut(s)	1299, 2346
BseMII	CTCAG	6 cut(s)	121, 146, 203, 659, 1743, 1817
BseNI	ACTGG	6 cut(s)	12, 1113, 1728, 2106, 2132, 2202
BseRI	GAGGAG	1 cut(s)	1563
BseXI	GCAGC	4 cut(s)	904, 1744, 2077, 2194
BseYI	CCCAGC	1 cut(s)	849
Bsh1236I	CGCG	1 cut(s)	98
BshFI	GGCC	5 cut(s)	41, 1546, 1617, 2105, 2131
BsiHKAI	GWGCWC	3 cut(s)	91, 150, 189
BsiHKCI	CYCGRG	3 cut(s)	157, 1248, 2115
BsiSI	CCGG	2 cut(s)	54, 294
BslFI	GGGAC	1 cut(s)	603
BslI	CCNNNNNNNGG	6 cut(s)	425, 482, 790, 1025, 1624, 2011
BsmAI	GTCTC	4 cut(s)	105, 262, 821, 1051
BsmBI	CGTCTC	4 cut(s)	105, 262, 821, 1051
BsmFI	GGGAC	1 cut(s)	603
BsmI	GAATGC	2 cut(s)	57, 582
BsnI	GGCC	5 cut(s)	41, 1546, 1617, 2105, 2131
BsoBI	CYCGRG	3 cut(s)	157, 1248, 2115
Bsp119I	TTCGAA	1 cut(s)	574
Bsp1286I	GDGCHC	4 cut(s)	91, 150, 189, 1882
Bsp1407I	TGTACA	3 cut(s)	326, 342, 699
BspACI	CCGC	4 cut(s)	1140, 1835, 1985, 2305
BspANI	GGCC	5 cut(s)	41, 1546, 1617, 2105, 2131
BspCNI	CTCAG	6 cut(s)	120, 145, 204, 660, 1744, 1816
BspFNI	CGCG	1 cut(s)	98
BspHI	TCATGA	1 cut(s)	1435
BspLI	GGNNCC	4 cut(s)	487, 591, 1030, 1138
BspMI	ACCTGC	3 cut(s)	373, 724, 1162
BspPI	GGATC	6 cut(s)	343, 1107, 1131, 1144, 1266, 1481
BspQI	GCTCTTC	1 cut(s)	1887
BspT104I	TTCGAA	1 cut(s)	574
BsrBI	CCGCTC	1 cut(s)	1985
BsrDI	GCAATG	2 cut(s)	1299, 2346
BsrFI	RCCGGY	2 cut(s)	53, 293
BsrGI	TGTACA	3 cut(s)	326, 342, 699
BsrI	ACTGG	6 cut(s)	12, 1113, 1728, 2106, 2132, 2202
BssAI	RCCGGY	2 cut(s)	53, 293
BssECI	CCNNGG	2 cut(s)	369, 1143
BssNI	GRCGYC	1 cut(s)	255
BssT1I	CCWWGG	2 cut(s)	369, 1143
Bst2UI	CCWGG	3 cut(s)	594, 791, 1619
Bst6I	CTCTTC	3 cut(s)	1056, 1419, 1887
BstACI	GRCGYC	1 cut(s)	255
BstAPI	GCANNNNNTGC	1 cut(s)	2090
BstAUI	TGTACA	3 cut(s)	326, 342, 699
BstBI	TTCGAA	1 cut(s)	574
BstDEI	CTNAG	7 cut(s)	107, 132, 212, 437, 668, 1752, 1803
BstENI	CCTNNNNNAGG	1 cut(s)	788
BstF5I	GGATG	6 cut(s)	415, 874, 1075, 1402, 1896, 2032
BstFNI	CGCG	1 cut(s)	98
BstH2I	RGCGCY	1 cut(s)	1194
BstHHI	GCGC	2 cut(s)	763, 1193
BstMAI	GTCTC	4 cut(s)	105, 262, 821, 1051
BstNI	CCWGG	3 cut(s)	594, 791, 1619
BstNSI	RCATGY	5 cut(s)	82, 1018, 1119, 1474, 1998
BstSCI	CCNGG	3 cut(s)	592, 789, 1617
BstSFI	CTRYAG	1 cut(s)	539
BstUI	CGCG	1 cut(s)	98
BstV1I	GCAGC	4 cut(s)	904, 1744, 2077, 2194
BstV2I	GAAGAC	2 cut(s)	1158, 1667
BstX2I	RGATCY	2 cut(s)	335, 1136
BstYI	RGATCY	2 cut(s)	335, 1136
BsuI	GTATCC	1 cut(s)	1912
BsuRI	GGCC	5 cut(s)	41, 1546, 1617, 2105, 2131
BtgZI	GCGATG	1 cut(s)	34
BtrI	CACGTC	1 cut(s)	376
BtsCI	GGATG	6 cut(s)	415, 874, 1075, 1402, 1896, 2032
BtsI	GCAGTG	1 cut(s)	985
BtsIMutI	CAGTG	8 cut(s)	510, 708, 870, 985, 2113, 2131, 2139, 2209
BveI	ACCTGC	3 cut(s)	373, 724, 1162
CciI	TCATGA	1 cut(s)	1435
CfoI	GCGC	2 cut(s)	763, 1193
Cfr10I	RCCGGY	2 cut(s)	53, 293
Cfr13I	GGNCC	3 cut(s)	590, 1544, 2129
CseI	GACGC	3 cut(s)	104, 122, 244
CsiI	ACCWGGT	1 cut(s)	592
DdeI	CTNAG	7 cut(s)	107, 132, 212, 437, 668, 1752, 1803
DraI	TTTAAA	1 cut(s)	2064
DraIII	CACNNNGTG	1 cut(s)	1070
EaeI	YGGCCR	2 cut(s)	39, 2103
Eam1104I	CTCTTC	3 cut(s)	1056, 1419, 1887
EarI	CTCTTC	3 cut(s)	1056, 1419, 1887
EciI	GGCGGA	1 cut(s)	1129
Ecl136II	GAGCTC	3 cut(s)	89, 148, 187
Eco130I	CCWWGG	2 cut(s)	369, 1143
Eco24I	GRGCYC	4 cut(s)	91, 150, 189, 1882
Eco47I	GGWCC	1 cut(s)	590
Eco47III	AGCGCT	1 cut(s)	1192
Eco53kI	GAGCTC	3 cut(s)	89, 148, 187
Eco57I	CTGAAG	2 cut(s)	839, 1868
Eco88I	CYCGRG	3 cut(s)	157, 1248, 2115
EcoICRI	GAGCTC	3 cut(s)	89, 148, 187
EcoNI	CCTNNNNNAGG	1 cut(s)	788
EcoO109I	RGGNCCY	1 cut(s)	590
EcoRI	GAATTC	1 cut(s)	1793
EcoRII	CCWGG	3 cut(s)	592, 789, 1617
EcoT14I	CCWWGG	2 cut(s)	369, 1143
EcoT22I	ATGCAT	4 cut(s)	84, 1996, 2287, 2359
EcoT38I	GRGCYC	4 cut(s)	91, 150, 189, 1882
ErhI	CCWWGG	2 cut(s)	369, 1143
Esp3I	CGTCTC	4 cut(s)	105, 262, 821, 1051
FaqI	GGGAC	1 cut(s)	603
FauNDI	CATATG	1 cut(s)	1511
FbaI	TGATCA	2 cut(s)	1383, 2020
FblI	GTMKAC	1 cut(s)	21
Fnu4HI	GCNGC	4 cut(s)	918, 1758, 2091, 2208
FokI	GGATG	6 cut(s)	402, 881, 1062, 1409, 1903, 2039
FriOI	GRGCYC	4 cut(s)	91, 150, 189, 1882
Fsp4HI	GCNGC	4 cut(s)	918, 1758, 2091, 2208
FspBI	CTAG	3 cut(s)	824, 1088, 2259
GlaI	GCGC	2 cut(s)	762, 1192
GluI	GCNGC	4 cut(s)	918, 1758, 2091, 2208
GsaI	CCCAGC	1 cut(s)	853
GsuI	CTGGAG	1 cut(s)	242
HaeII	RGCGCY	1 cut(s)	1194
HaeIII	GGCC	5 cut(s)	41, 1546, 1617, 2105, 2131
HapII	CCGG	2 cut(s)	54, 294
HgaI	GACGC	3 cut(s)	104, 122, 244
HhaI	GCGC	2 cut(s)	763, 1193
Hin1I	GRCGYC	1 cut(s)	255
Hin6I	GCGC	2 cut(s)	761, 1191
HinP1I	GCGC	2 cut(s)	761, 1191
HincII	GTYRAC	1 cut(s)	1012
HindII	GTYRAC	1 cut(s)	1012
HindIII	AAGCTT	2 cut(s)	563, 960
HinfI	GANTC	6 cut(s)	15, 421, 670, 1325, 1838, 2255
HpaII	CCGG	2 cut(s)	54, 294
HphI	GGTGA	7 cut(s)	613, 958, 1006, 1253, 1707, 2284, 2357
Hpy166II	GTNNAC	4 cut(s)	22, 343, 1012, 2000
Hpy8I	GTNNAC	4 cut(s)	22, 343, 1012, 2000
HpyAV	CCTTC	4 cut(s)	38, 491, 984, 1616
HpyCH4IV	ACGT	4 cut(s)	375, 830, 1044, 2300
HpyF3I	CTNAG	7 cut(s)	107, 132, 212, 437, 668, 1752, 1803
HpySE526I	ACGT	4 cut(s)	375, 830, 1044, 2300
Hsp92I	GRCGYC	1 cut(s)	255
HspAI	GCGC	2 cut(s)	761, 1191
KroI	GCCGGC	2 cut(s)	53, 293
KroNI	GCCGGC	2 cut(s)	55, 295
Ksp22I	TGATCA	2 cut(s)	1383, 2020
LguI	GCTCTTC	1 cut(s)	1887
LmnI	GCTCC	4 cut(s)	153, 1028, 1112, 1198
Lsp1109I	GCAGC	4 cut(s)	904, 1744, 2077, 2194
LweI	GCATC	6 cut(s)	57, 91, 126, 424, 2272, 2366
MabI	ACCWGGT	1 cut(s)	592
MaeI	CTAG	3 cut(s)	824, 1088, 2259
MaeII	ACGT	4 cut(s)	375, 830, 1044, 2300
MaeIII	GTNAC	9 cut(s)	471, 514, 1219, 1713, 1852, 2110, 2120, 2134, 2252
MbiI	CCGCTC	1 cut(s)	1985
MflI	RGATCY	2 cut(s)	335, 1136
MhlI	GDGCHC	4 cut(s)	91, 150, 189, 1882
MlsI	TGGCCA	1 cut(s)	2105
MluNI	TGGCCA	1 cut(s)	2105
MlyI	GAGTC	4 cut(s)	679, 1319, 1832, 2249
MmeI	TCCRAC	1 cut(s)	1006
Mox20I	TGGCCA	1 cut(s)	2105
Mph1103I	ATGCAT	4 cut(s)	84, 1996, 2287, 2359
MroNI	GCCGGC	2 cut(s)	53, 293
MroXI	GAANNNNTTC	1 cut(s)	948
MscI	TGGCCA	1 cut(s)	2105
MslI	CAYNNNNRTG	2 cut(s)	1266, 1292
Msp20I	TGGCCA	1 cut(s)	2105
MspI	CCGG	2 cut(s)	54, 294
MspR9I	CCNGG	3 cut(s)	594, 791, 1619
Mva1269I	GAATGC	2 cut(s)	57, 582
MvaI	CCWGG	3 cut(s)	594, 791, 1619
MvnI	CGCG	1 cut(s)	98
NaeI	GCCGGC	2 cut(s)	55, 295
NdeI	CATATG	1 cut(s)	1511
NgoMIV	GCCGGC	2 cut(s)	53, 293
NlaIV	GGNNCC	4 cut(s)	487, 591, 1030, 1138
NmeAIII	GCCGAG	1 cut(s)	107
NmuCI	GTSAC	5 cut(s)	1219, 1713, 1852, 2134, 2252
NsiI	ATGCAT	4 cut(s)	84, 1996, 2287, 2359
NspI	RCATGY	5 cut(s)	82, 1018, 1119, 1474, 1998
NspV	TTCGAA	1 cut(s)	574
PaeR7I	CTCGAG	2 cut(s)	157, 1248
PagI	TCATGA	1 cut(s)	1435
PaqCI	CACCTGC	1 cut(s)	373
PciSI	GCTCTTC	1 cut(s)	1887
PctI	GAATGC	2 cut(s)	57, 582
PdiI	GCCGGC	2 cut(s)	55, 295
PdmI	GAANNNNTTC	1 cut(s)	948
PfeI	GAWTC	2 cut(s)	15, 421
PflFI	GACNNNGTC	2 cut(s)	594, 1217
PkrI	GCNGC	4 cut(s)	919, 1759, 2092, 2209
PleI	GAGTC	4 cut(s)	678, 1319, 1832, 2249
PpsI	GAGTC	4 cut(s)	678, 1319, 1832, 2249
PpuMI	RGGWCCY	1 cut(s)	590
PshBI	ATTAAT	2 cut(s)	893, 1370
PsiI	TTATAA	1 cut(s)	1479
Psp124BI	GAGCTC	3 cut(s)	91, 150, 189
Psp5II	RGGWCCY	1 cut(s)	590
Psp6I	CCWGG	3 cut(s)	592, 789, 1617
PspFI	CCCAGC	1 cut(s)	849
PspGI	CCWGG	3 cut(s)	592, 789, 1617
PspN4I	GGNNCC	4 cut(s)	487, 591, 1030, 1138
PspPI	GGNCC	3 cut(s)	590, 1544, 2129
PspPPI	RGGWCCY	1 cut(s)	590
PspXI	VCTCGAGB	2 cut(s)	157, 1248
PsrI	GAACNNNNNNTAC	2 cut(s)	2300, 2332
PsuI	RGATCY	2 cut(s)	335, 1136
PsyI	GACNNNGTC	2 cut(s)	594, 1217
RseI	CAYNNNNRTG	2 cut(s)	1266, 1292
SacI	GAGCTC	3 cut(s)	91, 150, 189
SapI	GCTCTTC	1 cut(s)	1887
SatI	GCNGC	4 cut(s)	918, 1758, 2091, 2208
Sau96I	GGNCC	3 cut(s)	590, 1544, 2129
ScaI	AGTACT	2 cut(s)	179, 1107
SchI	GAGTC	4 cut(s)	679, 1319, 1832, 2249
ScrFI	CCNGG	3 cut(s)	594, 791, 1619
SduI	GDGCHC	4 cut(s)	91, 150, 189, 1882
SexAI	ACCWGGT	1 cut(s)	592
SfaNI	GCATC	6 cut(s)	57, 91, 126, 424, 2272, 2366
SfcI	CTRYAG	1 cut(s)	539
Sfr274I	CTCGAG	2 cut(s)	157, 1248
SfuI	TTCGAA	1 cut(s)	574
SinI	GGWCC	1 cut(s)	590
SlaI	CTCGAG	2 cut(s)	157, 1248
SmiMI	CAYNNNNRTG	2 cut(s)	1266, 1292
SmlI	CTYRAG	5 cut(s)	157, 453, 1005, 1248, 1848
SmoI	CTYRAG	5 cut(s)	157, 453, 1005, 1248, 1848
SsiI	CCGC	4 cut(s)	1140, 1835, 1985, 2305
SspMI	CTAG	3 cut(s)	824, 1088, 2259
SstI	GAGCTC	3 cut(s)	91, 150, 189
StyD4I	CCNGG	3 cut(s)	592, 789, 1617
StyI	CCWWGG	2 cut(s)	369, 1143
TaiI	ACGT	4 cut(s)	378, 833, 1047, 2303
TaqI	TCGA	6 cut(s)	85, 158, 260, 403, 574, 1249
TatI	WGTACW	8 cut(s)	177, 326, 342, 699, 926, 1105, 1737, 1813
TfiI	GAWTC	2 cut(s)	15, 421
TscAI	CASTG	8 cut(s)	517, 715, 870, 985, 2113, 2131, 2139, 2209
TseFI	GTSAC	5 cut(s)	1219, 1713, 1852, 2134, 2252
TseI	GCWGC	4 cut(s)	917, 1757, 2090, 2207
Tsp45I	GTSAC	5 cut(s)	1219, 1713, 1852, 2134, 2252
TspGWI	ACGGA	3 cut(s)	27, 1058, 1701
TspRI	CASTG	8 cut(s)	517, 715, 870, 985, 2113, 2131, 2139, 2209
Tth111I	GACNNNGTC	2 cut(s)	594, 1217
VpaK11BI	GGWCC	1 cut(s)	590
VspI	ATTAAT	2 cut(s)	893, 1370
XagI	CCTNNNNNAGG	1 cut(s)	788
XapI	RAATTY	4 cut(s)	544, 944, 1447, 1793
XbaI	TCTAGA	1 cut(s)	1087
XceI	RCATGY	5 cut(s)	82, 1018, 1119, 1474, 1998
XhoI	CTCGAG	2 cut(s)	157, 1248
XmiI	GTMKAC	1 cut(s)	21
XmnI	GAANNNNTTC	1 cut(s)	948
XspI	CTAG	3 cut(s)	824, 1088, 2259
ZrmI	AGTACT	2 cut(s)	179, 1107
Zsp2I	ATGCAT	4 cut(s)	84, 1996, 2287, 2359

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.