Rh6AG434600

Vacuolar protein sorting-associated protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
62424137 .. 62430135
5999 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG434600.1

Sequence Viewer

Length: 2301 bp
ATGGCTCGCAGAAGGCATCGCCGGCATTCAACACCACGCCTTCTACATGCATCGAGCTCTGGTACTCCCATTTCCATTAGATTCATACAATTCCCCAATCTCCGAAGACCTAATTTTGATTTCAATTTTTCTCAGGACGCTAACAATCTCAGAGACGCTCTCAAATACTCGGCTCAGATGCTCTCCGAGCTCCGAACCTCGAGGCTCTCGCCTCACAAATACTACGAACTCTGTAACGTCTCGTATCTCCTATGTACGGTAGGATCTGTGTACATTAAATCAAAGGAAGCACCTGCCAAAGACGTGCTTAAAGACCTTGTGGAAATGTGTCGTGCTGTTCAACATCCGATTCGGGGGCTCTTTCTGAGGAGTTACCTTTCTCAAGTCAGTAGAGATAAGTTACCTGATCTCGGTTCTGAGTATGAAGGAGGTTCTGACACTGTTACGGATGCCGTAGATTTTGTGCTACAGAATTTTACAGAGATGAATAAGCTTTGGGTTCGAATGCAGTATCAGGGACCTGGTCGGGCGAGAGAGAAGCATGAGAAGGAAAGAAGCGAACTTCGTGATCTAGTAGGGAAAAATCTCCTTGTTCTCAGTCAGATAGAGGGTGTGGAACTCCAAATGTACAAAGACACTGTTCTTCCCAGAGTATTAGAGCAGGTTATCAACTGTAAAGATGAGCTGGCCCAGTATTATTTGATGGATTGCCTGATCCAGGTCTTTCCGGATGAGTACCACTTGCAGACACTGGAGACATTATTGGGTGCTTGCCCCCAGCTTCAGCCAACAGTGGATATCAAGACAGTGCTATCTCAATTAATGGACAGGTTATCAAATTATGCTGCTTCAAGTACAGATGTATTACCCGAATTTCTTCAAGTCGAAGCTTTCGCTAAATTAAGTAGTGCTATTGGGAGGGTGATAGAAGCACAAGTTGACATGCCTATTGTTGGAGCCATATCTTTGTACGTCTCTCTTCTTACATTCACACTCCGTGTTCATCCTGATCGTCTAGATTATGTGGATCAAGTACTGGGAGCATGTGTTAGGAAGCTACCGGGAAACACTAAGGTTGAAGACAAGAGAGCCATAAAGCAGGTTGTCGCACTATTAAGTGCTCCTTTGGAAAAGTACAATGACATTGTCACAGCCCTCACACTTTCTAATTATCCTCGAGTTATGGATCACCTTGATAATGGAACAAATAAAGTCATGGCAATGGTTATCATTCAAAGCATTATGAAAAACGACTCTTGTATCTCGACTGCTGATAAGGTGGAGGTATTGTTTGAATTAATCAAAGGGCTGATCAAGGATTTGGATGGTACTTCTGATGATGAGCTTGACGAGGAGGATTTTCATGATGAGCAAAATTCTGTTGCTCGCCTTATACACATGCTTTATAATGATGATCCAGAAGAAATGTTAAAGATCATATGTACGGTAAAGAAGCACATAATGAATGGAGGGCCAAAGCGCTTACCTTTTACTGTTCCTCCTCTTGTTTTTTCTGCACTTGGGTTGGTTAGGCAACTGCAAGGTCAGGATGGAGAGGTAGTTGGAGAAGATATGCCTGCCACGCCGAAGACAGTTTTTCAGTTTCTAAATCAGACAGTAGACGCTCTTTCCTCTATTCCGTCTCCTGAACTGGCATTAAGGCTGTACTTACATTGTGCTGAGGCTGCCAACGACTGTGATCTTGAACCTGTTGCTTATGAATTCTTCACTCAGGCATTTGTACTATATGAAGAAGAAATCGCGGATTCCAAAGCTCAAGTGACTGCAATACATCTCATTATTGGGGCTCTTCAGAGGATGAATGTGTTTGGCACTGAAAATAGGGATACTTTAACACACAAGGCCACAGGGTATTCTGCAAAGCTTTTGAAGAAACCTGACCAGTGCCGAGCAGTGTATGCATGTTCACACCTGTTTTGGGTTGATGATCAGGATGGTGTTAAAGATGGAGAAAGGGTCTTGCTTTGTTTAAAGCGTGCCTTAAGAATTGCAAATGCTGCTCAACAAATGGCCAGTGTAACTCGGGGTAGCAGTGGGCCAGTGACACTCTTTGTTGAAATACTAAACAAGTACCTCTACTTTTTTGAGAAAGGAAACCCCCAGATTACCAGTGCTGCAATTCAGGGATTGGTGGAGTTAATTACAACCGAGTTGCAAAGTGACTCTAGTAATGTGAAACCGGCCTCTGATGCATTTTTTGCCAGCACATTGCGGTACATACAGTTCCAGAAACAGAAAGGCGGGGCAATGGGTGAAAAATATGCATCTATTAAGGTGTGA

Protein Analysis

766

Amino Acids

86.09

Weight (kDa)

5.83

Isoelectric Point (pI)

39.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Vps35 PF03635 46 - 77 2.6e-08 Vacuolar protein sorting-associated protein 35
Vps35 PF03635 82 - 723 2.2e-241 Vacuolar protein sorting-associated protein 35
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012830)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1407
AarI CACCTGC 1 cut(s) 301
AbsI CCTCGAGG 1 cut(s) 199
Acc36I ACCTGC 3 cut(s) 301, 652, 1090
AccI GTMKAC 1 cut(s) 1620
AccII CGCG 1 cut(s) 1763
AccIII TCCGGA 1 cut(s) 727
AciI CCGC 3 cut(s) 1763, 2233, 2262
AclWI GGATC 5 cut(s) 271, 709, 1035, 1194, 1409
AcoI YGGCCR 1 cut(s) 2031
AcsI RAATTY 4 cut(s) 472, 872, 1375, 1721
AcuI CTGAAG 2 cut(s) 767, 1796
AdeI CACNNNGTG 1 cut(s) 998
AfeI AGCGCT 1 cut(s) 1481
AfiI CCNNNNNNNGG 6 cut(s) 256, 353, 410, 718, 953, 1939
AflII CTTAAG 1 cut(s) 2002
AjiI CACGTC 1 cut(s) 304
AjnI CCWGG 2 cut(s) 520, 717
Alw21I GWGCWC 3 cut(s) 59, 192, 1123
Alw26I GTCTC 5 cut(s) 147, 244, 749, 979, 1647
AlwI GGATC 5 cut(s) 271, 709, 1035, 1194, 1409
AlwNI CAGNNNCTG 1 cut(s) 751
Ama87I CYCGRG 3 cut(s) 199, 1176, 2043
Aor13HI TCCGGA 1 cut(s) 727
Aor51HI AGCGCT 1 cut(s) 1481
AoxI GGCC 6 cut(s) 687, 1472, 1863, 2031, 2057, 2202
ApeKI GCWGC 4 cut(s) 845, 1685, 2018, 2135
ApoI RAATTY 4 cut(s) 472, 872, 1375, 1721
AseI ATTAAT 2 cut(s) 821, 1298
Asp700I GAANNNNTTC 1 cut(s) 876
AspLEI GCGC 1 cut(s) 1482
AspS9I GGNCC 4 cut(s) 518, 688, 1472, 2057
AsuC2I CCSGG 1 cut(s) 1062
AsuHPI GGTGA 3 cut(s) 934, 1181, 2285
AsuII TTCGAA 1 cut(s) 502
AvaI CYCGRG 3 cut(s) 199, 1176, 2043
AvaII GGWCC 1 cut(s) 518
BaeI ACNNNNGTAYC 2 cut(s) 1243, 1276
BalI TGGCCA 1 cut(s) 2033
BanII GRGCYC 4 cut(s) 59, 192, 360, 1810
BbsI GAAGAC 3 cut(s) 112, 1086, 1595
Bbv12I GWGCWC 3 cut(s) 59, 192, 1123
BbvCI CCTCAGC 1 cut(s) 1680
BbvI GCAGC 4 cut(s) 832, 1672, 2005, 2122
BccI CCATC 5 cut(s) 697, 1319, 1544, 1949, 1961
BceAI ACGGC 1 cut(s) 437
BciT130I CCWGG 2 cut(s) 522, 719
BciVI GTATCC 1 cut(s) 1840
BclI TGATCA 2 cut(s) 1311, 1948
BcnI CCSGG 1 cut(s) 1062
BcoDI GTCTC 5 cut(s) 147, 244, 749, 979, 1647
BfaI CTAG 3 cut(s) 572, 1016, 2187
BfmI CTRYAG 1 cut(s) 467
BfoI RGCGCY 1 cut(s) 1483
BfrI CTTAAG 1 cut(s) 2002
BfuAI ACCTGC 3 cut(s) 301, 652, 1090
BfuI GTATCC 1 cut(s) 1840
BisI GCNGC 4 cut(s) 846, 1686, 2019, 2136
BlsI GCNGC 4 cut(s) 847, 1687, 2020, 2137
BmcAI AGTACT 1 cut(s) 1035
Bme1390I CCNGG 3 cut(s) 522, 719, 1062
Bme18I GGWCC 1 cut(s) 518
BmeT110I CYCGRG 3 cut(s) 199, 1176, 2043
BmgBI CACGTC 1 cut(s) 304
BmgT120I GGNCC 4 cut(s) 518, 688, 1472, 2057
BmiI GGNNCC 2 cut(s) 519, 958
BmrFI CCNGG 3 cut(s) 522, 719, 1062
BmrI ACTGGG 2 cut(s) 685, 1046
BmsI GCATC 6 cut(s) 25, 59, 168, 439, 2200, 2294
BmuI ACTGGG 2 cut(s) 685, 1046
BpiI GAAGAC 3 cut(s) 112, 1086, 1595
BplI GAGNNNNNCTC 2 cut(s) 144, 176
BpmI CTGGAG 1 cut(s) 773
Bpu10I CCTNAGC 1 cut(s) 1680
Bpu14I TTCGAA 1 cut(s) 502
BpuEI CTTGAG 2 cut(s) 366, 1761
BpuMI CCSGG 1 cut(s) 1062
BsaWI WCCGGW 1 cut(s) 727
Bsc4I CCNNNNNNNGG 6 cut(s) 256, 353, 410, 718, 953, 1939
Bse118I RCCGGY 2 cut(s) 21, 2200
Bse1I ACTGG 8 cut(s) 691, 756, 1041, 1656, 1903, 2034, 2060, 2130
Bse3DI GCAATG 3 cut(s) 1227, 2228, 2274
BseAI TCCGGA 1 cut(s) 727
BseBI CCWGG 2 cut(s) 522, 719
BseGI GGATG 8 cut(s) 343, 454, 736, 1003, 1330, 1555, 1824, 1960
BseLI CCNNNNNNNGG 6 cut(s) 256, 353, 410, 718, 953, 1939
BseMI GCAATG 3 cut(s) 1227, 2228, 2274
BseMII CTCAG 8 cut(s) 146, 163, 188, 356, 408, 610, 1671, 1745
BseNI ACTGG 8 cut(s) 691, 756, 1041, 1656, 1903, 2034, 2060, 2130
BseRI GAGGAG 3 cut(s) 382, 1367, 1491
BseXI GCAGC 4 cut(s) 832, 1672, 2005, 2122
BseYI CCCAGC 1 cut(s) 777
BsgI GTGCAG 1 cut(s) 1500
Bsh1236I CGCG 1 cut(s) 1763
BshFI GGCC 6 cut(s) 689, 1474, 1865, 2033, 2059, 2204
BsiHKAI GWGCWC 3 cut(s) 59, 192, 1123
BsiHKCI CYCGRG 3 cut(s) 199, 1176, 2043
BsiSI CCGG 4 cut(s) 22, 728, 1061, 2201
BslFI GGGAC 1 cut(s) 531
BslI CCNNNNNNNGG 6 cut(s) 256, 353, 410, 718, 953, 1939
BsmAI GTCTC 5 cut(s) 147, 244, 749, 979, 1647
BsmBI CGTCTC 4 cut(s) 147, 244, 979, 1647
BsmFI GGGAC 1 cut(s) 531
BsmI GAATGC 2 cut(s) 25, 510
BsnI GGCC 6 cut(s) 689, 1474, 1865, 2033, 2059, 2204
BsoBI CYCGRG 3 cut(s) 199, 1176, 2043
Bsp119I TTCGAA 1 cut(s) 502
Bsp1286I GDGCHC 5 cut(s) 59, 192, 360, 1123, 1810
Bsp13I TCCGGA 1 cut(s) 727
Bsp1407I TGTACA 2 cut(s) 270, 627
BspACI CCGC 3 cut(s) 1763, 2233, 2262
BspANI GGCC 6 cut(s) 689, 1474, 1865, 2033, 2059, 2204
BspCNI CTCAG 8 cut(s) 145, 162, 187, 357, 409, 609, 1672, 1744
BspEI TCCGGA 1 cut(s) 727
BspFNI CGCG 1 cut(s) 1763
BspHI TCATGA 1 cut(s) 1363
BspLI GGNNCC 2 cut(s) 519, 958
BspMI ACCTGC 3 cut(s) 301, 652, 1090
BspPI GGATC 5 cut(s) 271, 709, 1035, 1194, 1409
BspQI GCTCTTC 1 cut(s) 1815
BspT104I TTCGAA 1 cut(s) 502
BspTI CTTAAG 1 cut(s) 2002
BsrDI GCAATG 3 cut(s) 1227, 2228, 2274
BsrFI RCCGGY 2 cut(s) 21, 2200
BsrGI TGTACA 2 cut(s) 270, 627
BsrI ACTGG 8 cut(s) 691, 756, 1041, 1656, 1903, 2034, 2060, 2130
BssAI RCCGGY 2 cut(s) 21, 2200
Bst2UI CCWGG 2 cut(s) 522, 719
Bst6I CTCTTC 2 cut(s) 984, 1815
BstAFI CTTAAG 1 cut(s) 2002
BstAPI GCANNNNNTGC 3 cut(s) 1919, 2018, 2219
BstAUI TGTACA 2 cut(s) 270, 627
BstBI TTCGAA 1 cut(s) 502
BstC8I GCNNGC 8 cut(s) 7, 23, 687, 772, 1387, 1578, 1998, 2224
BstDEI CTNAG 9 cut(s) 132, 149, 174, 365, 417, 596, 1071, 1680, 1731
BstENI CCTNNNNNAGG 1 cut(s) 716
BstF5I GGATG 8 cut(s) 343, 454, 736, 1003, 1330, 1555, 1824, 1960
BstFNI CGCG 1 cut(s) 1763
BstH2I RGCGCY 1 cut(s) 1483
BstHHI GCGC 1 cut(s) 1482
BstMAI GTCTC 5 cut(s) 147, 244, 749, 979, 1647
BstMWI GCNNNNNNNGC 8 cut(s) 22, 187, 1582, 1685, 1919, 2018, 2210, 2219
BstNI CCWGG 2 cut(s) 522, 719
BstNSI RCATGY 5 cut(s) 50, 946, 1047, 1402, 1926
BstSCI CCNGG 3 cut(s) 520, 717, 1060
BstSFI CTRYAG 1 cut(s) 467
BstUI CGCG 1 cut(s) 1763
BstV1I GCAGC 4 cut(s) 832, 1672, 2005, 2122
BstV2I GAAGAC 3 cut(s) 112, 1086, 1595
BstX2I RGATCY 1 cut(s) 263
BstYI RGATCY 1 cut(s) 263
BsuI GTATCC 1 cut(s) 1840
BsuRI GGCC 6 cut(s) 689, 1474, 1865, 2033, 2059, 2204
BtgZI GCGATG 1 cut(s) 2
BtrI CACGTC 1 cut(s) 304
BtsCI GGATG 8 cut(s) 343, 454, 736, 1003, 1330, 1555, 1824, 1960
BtsI GCAGTG 2 cut(s) 1920, 2059
BveI ACCTGC 3 cut(s) 301, 652, 1090
Cac8I GCNNGC 8 cut(s) 7, 23, 687, 772, 1387, 1578, 1998, 2224
CaiI CAGNNNCTG 1 cut(s) 751
CciI TCATGA 1 cut(s) 1363
CfoI GCGC 1 cut(s) 1482
Cfr10I RCCGGY 2 cut(s) 21, 2200
Cfr13I GGNCC 4 cut(s) 518, 688, 1472, 2057
CseI GACGC 3 cut(s) 146, 164, 1631
CsiI ACCWGGT 1 cut(s) 520
CviAII CATG 8 cut(s) 47, 542, 943, 1044, 1216, 1364, 1399, 1923
DdeI CTNAG 9 cut(s) 132, 149, 174, 365, 417, 596, 1071, 1680, 1731
DraI TTTAAA 1 cut(s) 1992
DraIII CACNNNGTG 1 cut(s) 998
EaeI YGGCCR 1 cut(s) 2031
Eam1104I CTCTTC 2 cut(s) 984, 1815
EarI CTCTTC 2 cut(s) 984, 1815
Ecl136II GAGCTC 2 cut(s) 57, 190
Eco24I GRGCYC 4 cut(s) 59, 192, 360, 1810
Eco32I GATATC 1 cut(s) 799
Eco47I GGWCC 1 cut(s) 518
Eco47III AGCGCT 1 cut(s) 1481
Eco53kI GAGCTC 2 cut(s) 57, 190
Eco57I CTGAAG 2 cut(s) 767, 1796
Eco88I CYCGRG 3 cut(s) 199, 1176, 2043
EcoICRI GAGCTC 2 cut(s) 57, 190
EcoNI CCTNNNNNAGG 1 cut(s) 716
EcoO109I RGGNCCY 1 cut(s) 518
EcoRI GAATTC 1 cut(s) 1721
EcoRII CCWGG 2 cut(s) 520, 717
EcoRV GATATC 1 cut(s) 799
EcoT22I ATGCAT 4 cut(s) 52, 1924, 2215, 2287
EcoT38I GRGCYC 4 cut(s) 59, 192, 360, 1810
Esp3I CGTCTC 4 cut(s) 147, 244, 979, 1647
FaeI CATG 8 cut(s) 50, 545, 946, 1047, 1219, 1367, 1402, 1926
FalI AAGNNNNNCTT 6 cut(s) 291, 323, 1108, 1140, 1985, 2017
FaqI GGGAC 1 cut(s) 531
FatI CATG 8 cut(s) 46, 541, 942, 1043, 1215, 1363, 1398, 1922
FauI CCCGC 1 cut(s) 2255
FauNDI CATATG 1 cut(s) 1439
FbaI TGATCA 2 cut(s) 1311, 1948
FblI GTMKAC 1 cut(s) 1620
Fnu4HI GCNGC 4 cut(s) 846, 1686, 2019, 2136
FokI GGATG 8 cut(s) 330, 461, 743, 990, 1337, 1562, 1831, 1967
FriOI GRGCYC 4 cut(s) 59, 192, 360, 1810
Fsp4HI GCNGC 4 cut(s) 846, 1686, 2019, 2136
FspBI CTAG 3 cut(s) 572, 1016, 2187
GlaI GCGC 1 cut(s) 1481
GluI GCNGC 4 cut(s) 846, 1686, 2019, 2136
GsaI CCCAGC 1 cut(s) 781
GsuI CTGGAG 1 cut(s) 773
HaeII RGCGCY 1 cut(s) 1483
HaeIII GGCC 6 cut(s) 689, 1474, 1865, 2033, 2059, 2204
HapII CCGG 4 cut(s) 22, 728, 1061, 2201
HgaI GACGC 3 cut(s) 146, 164, 1631
HhaI GCGC 1 cut(s) 1482
Hin1II CATG 8 cut(s) 50, 545, 946, 1047, 1219, 1367, 1402, 1926
Hin6I GCGC 1 cut(s) 1480
HinP1I GCGC 1 cut(s) 1480
HincII GTYRAC 1 cut(s) 940
HindII GTYRAC 1 cut(s) 940
HindIII AAGCTT 3 cut(s) 491, 888, 1883
HinfI GANTC 5 cut(s) 81, 349, 1253, 1766, 2183
HpaII CCGG 4 cut(s) 22, 728, 1061, 2201
HphI GGTGA 3 cut(s) 934, 1181, 2285
Hpy166II GTNNAC 4 cut(s) 271, 940, 1621, 1928
Hpy8I GTNNAC 4 cut(s) 271, 940, 1621, 1928
HpyAV CCTTC 4 cut(s) 6, 50, 419, 541
HpyCH4IV ACGT 3 cut(s) 237, 303, 972
HpyF10VI GCNNNNNNNGC 8 cut(s) 22, 187, 1582, 1685, 1919, 2018, 2210, 2219
HpyF3I CTNAG 9 cut(s) 132, 149, 174, 365, 417, 596, 1071, 1680, 1731
HpySE526I ACGT 3 cut(s) 237, 303, 972
Hsp92II CATG 8 cut(s) 50, 545, 946, 1047, 1219, 1367, 1402, 1926
HspAI GCGC 1 cut(s) 1480
Kpn2I TCCGGA 1 cut(s) 727
KroI GCCGGC 1 cut(s) 21
KroNI GCCGGC 1 cut(s) 23
Ksp22I TGATCA 2 cut(s) 1311, 1948
LguI GCTCTTC 1 cut(s) 1815
LmnI GCTCC 4 cut(s) 195, 956, 1040, 1126
Lsp1109I GCAGC 4 cut(s) 832, 1672, 2005, 2122
LweI GCATC 6 cut(s) 25, 59, 168, 439, 2200, 2294
MabI ACCWGGT 1 cut(s) 520
MaeI CTAG 3 cut(s) 572, 1016, 2187
MaeII ACGT 3 cut(s) 237, 303, 972
MaeIII GTNAC 9 cut(s) 233, 371, 399, 442, 1147, 1780, 2038, 2062, 2180
MflI RGATCY 1 cut(s) 263
MhlI GDGCHC 5 cut(s) 59, 192, 360, 1123, 1810
MlsI TGGCCA 1 cut(s) 2033
MluNI TGGCCA 1 cut(s) 2033
MlyI GAGTC 2 cut(s) 1247, 2177
MmeI TCCRAC 2 cut(s) 934, 1543
Mox20I TGGCCA 1 cut(s) 2033
Mph1103I ATGCAT 4 cut(s) 52, 1924, 2215, 2287
MroI TCCGGA 1 cut(s) 727
MroNI GCCGGC 1 cut(s) 21
MroXI GAANNNNTTC 1 cut(s) 876
MscI TGGCCA 1 cut(s) 2033
MslI CAYNNNNRTG 1 cut(s) 1220
Msp20I TGGCCA 1 cut(s) 2033
MspCI CTTAAG 1 cut(s) 2002
MspI CCGG 4 cut(s) 22, 728, 1061, 2201
MspR9I CCNGG 3 cut(s) 522, 719, 1062
Mva1269I GAATGC 2 cut(s) 25, 510
MvaI CCWGG 2 cut(s) 522, 719
MvnI CGCG 1 cut(s) 1763
MwoI GCNNNNNNNGC 8 cut(s) 22, 187, 1582, 1685, 1919, 2018, 2210, 2219
NaeI GCCGGC 1 cut(s) 23
NciI CCSGG 1 cut(s) 1062
NdeI CATATG 1 cut(s) 1439
NgoMIV GCCGGC 1 cut(s) 21
NlaIII CATG 8 cut(s) 50, 545, 946, 1047, 1219, 1367, 1402, 1926
NlaIV GGNNCC 2 cut(s) 519, 958
NmeAIII GCCGAG 2 cut(s) 149, 1934
NmuCI GTSAC 4 cut(s) 1147, 1780, 2062, 2180
NsiI ATGCAT 4 cut(s) 52, 1924, 2215, 2287
NspI RCATGY 5 cut(s) 50, 946, 1047, 1402, 1926
NspV TTCGAA 1 cut(s) 502
PaeR7I CTCGAG 2 cut(s) 199, 1176
PagI TCATGA 1 cut(s) 1363
PaqCI CACCTGC 1 cut(s) 301
PciSI GCTCTTC 1 cut(s) 1815
PctI GAATGC 2 cut(s) 25, 510
PdiI GCCGGC 1 cut(s) 23
PdmI GAANNNNTTC 1 cut(s) 876
PfeI GAWTC 3 cut(s) 81, 349, 1766
PflFI GACNNNGTC 2 cut(s) 522, 1145
PkrI GCNGC 4 cut(s) 847, 1687, 2020, 2137
PleI GAGTC 2 cut(s) 1247, 2177
PpsI GAGTC 2 cut(s) 1247, 2177
PpuMI RGGWCCY 1 cut(s) 518
PshBI ATTAAT 2 cut(s) 821, 1298
PsiI TTATAA 1 cut(s) 1407
Psp124BI GAGCTC 2 cut(s) 59, 192
Psp5II RGGWCCY 1 cut(s) 518
Psp6I CCWGG 2 cut(s) 520, 717
PspFI CCCAGC 1 cut(s) 777
PspGI CCWGG 2 cut(s) 520, 717
PspN4I GGNNCC 2 cut(s) 519, 958
PspPI GGNCC 4 cut(s) 518, 688, 1472, 2057
PspPPI RGGWCCY 1 cut(s) 518
PspXI VCTCGAGB 2 cut(s) 199, 1176
PsrI GAACNNNNNNTAC 2 cut(s) 2228, 2260
PstNI CAGNNNCTG 1 cut(s) 751
PsuI RGATCY 1 cut(s) 263
PsyI GACNNNGTC 2 cut(s) 522, 1145
RseI CAYNNNNRTG 1 cut(s) 1220
SacI GAGCTC 2 cut(s) 59, 192
SapI GCTCTTC 1 cut(s) 1815
SatI GCNGC 4 cut(s) 846, 1686, 2019, 2136
Sau96I GGNCC 4 cut(s) 518, 688, 1472, 2057
ScaI AGTACT 1 cut(s) 1035
SchI GAGTC 2 cut(s) 1247, 2177
ScrFI CCNGG 3 cut(s) 522, 719, 1062
SduI GDGCHC 5 cut(s) 59, 192, 360, 1123, 1810
SexAI ACCWGGT 1 cut(s) 520
SfaNI GCATC 6 cut(s) 25, 59, 168, 439, 2200, 2294
SfcI CTRYAG 1 cut(s) 467
Sfr274I CTCGAG 2 cut(s) 199, 1176
SfuI TTCGAA 1 cut(s) 502
SinI GGWCC 1 cut(s) 518
SlaI CTCGAG 2 cut(s) 199, 1176
SmiMI CAYNNNNRTG 1 cut(s) 1220
SmlI CTYRAG 5 cut(s) 199, 381, 1176, 1776, 2002
SmoI CTYRAG 5 cut(s) 199, 381, 1176, 1776, 2002
SsiI CCGC 3 cut(s) 1763, 2233, 2262
SspMI CTAG 3 cut(s) 572, 1016, 2187
SstI GAGCTC 2 cut(s) 59, 192
StyD4I CCNGG 3 cut(s) 520, 717, 1060
TaiI ACGT 3 cut(s) 240, 306, 975
TaqI TCGA 6 cut(s) 53, 200, 502, 885, 1177, 1265
TatI WGTACW 7 cut(s) 270, 627, 854, 1033, 1134, 1665, 1741
TfiI GAWTC 3 cut(s) 81, 349, 1766
TseFI GTSAC 4 cut(s) 1147, 1780, 2062, 2180
TseI GCWGC 4 cut(s) 845, 1685, 2018, 2135
Tsp45I GTSAC 4 cut(s) 1147, 1780, 2062, 2180
TspGWI ACGGA 3 cut(s) 461, 986, 1629
Tth111I GACNNNGTC 2 cut(s) 522, 1145
Vha464I CTTAAG 1 cut(s) 2002
VpaK11BI GGWCC 1 cut(s) 518
VspI ATTAAT 2 cut(s) 821, 1298
XagI CCTNNNNNAGG 1 cut(s) 716
XapI RAATTY 4 cut(s) 472, 872, 1375, 1721
XbaI TCTAGA 1 cut(s) 1015
XceI RCATGY 5 cut(s) 50, 946, 1047, 1402, 1926
XhoI CTCGAG 2 cut(s) 199, 1176
XmiI GTMKAC 1 cut(s) 1620
XmnI GAANNNNTTC 1 cut(s) 876
XspI CTAG 3 cut(s) 572, 1016, 2187
ZrmI AGTACT 1 cut(s) 1035
Zsp2I ATGCAT 4 cut(s) 52, 1924, 2215, 2287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.