Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0009276

Physical Location & Seq

Genomic Coordinates Reverse (-)

29206439 .. 29215989

Gene Structure 9551 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g41230.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2940 bp

ATGAGCTCCTTCTCCATCACGCGGAAGAAGACTCCCTTCCAGAAGCACCGAGAGGAGGAAGAGGCCAAGAAGAAGAGAGCTGAGGATGAAACAGCTCGCTTATATGCAGAGTTCGTGGAATCATTTCAAGGGGAGAATGCGGCAGGCTCTAGGACTTTTGTGCGCGGCGGAACCATCAACCCCAATGAAAGGGTTAAGACCGATTCCCAAGGTGAAAAGTCCAAAGATGGGGTATCTGTTCCAAAGAAGGGGAGTAGGTATGTGCCATCTTTCTTACCACCGCCTTTGGCATCCAAAGGGAAAGAATCTGATAAGAAGAGGGAGGAGGAAAAGCCAAAGGAGAAAGAAAAGGGAAAGTCTCGAAACATAGATCACTTTATGGAGGAGCTGAAGCAAGAACAGGAATTGAGGGAGAGGCGAAATCAAGAACGTGAACATTGGCGTGATGGGCGGCCGAATGAGAATTCTGTGGCCTCTAGTCGTTTTGATGAAATGCCTGATGAATTTGATCCAAGTGGAAAACTTCTGGGATCATTTGATGATGGCGATCCACAAACTACTAATTTATATGTTGGAAATCTTTCACCGAAGGTGGATGAGAATTTTCTTTTACGAACCTTTGGTAGATTTGGGCCTATTGCCAGTGTGAAAATAATGTGGCCTAGAACTGAAGAGGAACGGAGGCGTCAAAGGAATTGTGGCTTTGTAGCTTTCATGAATAGAGCTGATGGACAGGCAGCAAAGGATGAAATGCAAGGGGTGGTTGTATATGAATACGAGTTGAAGATTGGATGGGGAAAGTCTGTAGCTCTCCCATCACAAGCGTTACCTGCACCCCCTCCAGGACATATGGCCATCAGGAGTAAGGAGGGTGCCACTGTAATTTTGTCTGGTCCATCAGGCCCACCTGTCACTTCTGTTCCTAGTCAGAATTCTGAACTGGTTCTTACCCCAAATGTCCCTGATATAACGGTTGTTCCACCGGAAGATGATCACCTTCGCCATGTTATTGATACAATGGCTTTGTATGTTCTGGATGGTGGATGTGCATTTGAACAAGCTATTATGGAAAGGGGCAGAGGGAATCCTCTTTTCCATTTCTTGTTTGAACTTGGATCAAAAGAGCATACTTACTATGTTTGGAGGCTTTATTCATTTGCTCAGGGCGATACTCTGCAAAGGTGGCGAACTGAACCTTTTATCATGATTACTGGTAGCGGAAGATGGATCCCGCCCTCTCTTCCAGCATTGAGAAGCCCTGAGCACGAAAAAGAGTCTAGTAGCACATATGCTGCAGGGAGAAGCAGGCGTGTAGAGTCGGAACGAACGCTCACTGATCCACAAAGGGATGAGTTTGAGGATATGTTGCGTGCATTAACATTAGAGAGGAGTCAGATAAAGGATGCTATGGGGTTTGCATTGGATAATGCTGATGCTGCTGGGGAGATAGTTGAGGTTTTGACGGAATCTTTGACTCTTAAGGAGACCCCTATCCCCACCAAAGTTGCTCGACTCATGCTTGTCTCTGATGTGCTCCACAATAGCAGTGCTCCAGTGAAAAATGCATCTGCATACCGCACCAAATTTGAAGCAACATTACCAGACATAATGGAGAGCTTTAATGATTTGTATCGTGGCATAACAGGAAGGATCACTGCTGAGGCCCTTAAGGAAAGAGTTCTGAAAGTATTACAAGTGTGGTCAGACTGGTTTCTTTTTTCAGATGCCTATGTCAATGGATTGCGGGCTACTTTTCTTCGGTCTGGGAACTCTGGTGTGGTACCCTTCCACTCTGTATGTGGTGATGCACCTGATATAGAGAAAAAAACTACTTCTGAAGATGCAGGTGATGCTAAAACTAACCAAGATGCAGCTTTGGCCATGGGAAAAGGAGCAGCTACGAGGGAGCTGTTGAACCTTCCCATGGCTGAATTAGAAAGACGCTGCAGACATAATGGATTGTCTCTTGTTGGTGGTCGAGAAATGATGGTTGCACGATTGCTTAGTCTGGAAGAGGCAGAAAAACAGAGGGGCTATGAACTTGATGATGACTTGAAATATGGACAGAACCATTCAAGTTCAGGTAGACATTCTAGTAGTCGAAAAGAAATGAATATTGAACCAGATCCATTGGGACTGTCTGGATGGAATCGCTATGTAGAGGATGAGATACAATCTGAAGGGAAAGTGTCTTTATCAAAGGCCCAGACCCATACCAGTCCACAACCTGAACTGAAACCTTTCACTACAAAAGAGAAAAGTGATCCTGTTCTACCAGCCTCTAAATGGGCACGAGAGGATGATGACAGTGATGATGACCAAAAGCGAAGTGCCAAGGGTCTTGGGTTAAGCTACTCGTCTGGAAGTGAAAATGCTGGTGATGGTCCCAGTAAAGCTGATGAGATGGAGGTTGCAACTGATGTAAGAATTCCAGCACAGCCTGATAGTGGACTAAGTGAAGAACAGAGGCAAAAGTTGAGACGTTTGGAAGTTTCTCTGTTAGAATATCGTGAATCTCTTGAGGAGCGGGGAATTAGAAGTCCTGAAGAAATTGAGAGGAAGGTTGCAATACATCGCAAACGACTTGAATCGGAGTACGGGTTATCTGATTCTAGCGAAGATGCTTCTGGGCGTAAGAGGACTTCTTCCGAGAGGAAGGACAGAAGGGATGATGATTCCCGTGATGCTTCAAGAAAGCGGCACCGCAGTGGAAGCCAAAGTGATAGCCCGTTACAGAAGTCATCAAGCAGAGACCGGGACAGGGAATATGATTTGGATAGAGACCGGGAAAGACAGCGGGATAGAGACAGGGATAGAGCCCATGATTTTGAAGGTAACAGGGGGAGGGATTGGGACAGGGACAAGAGTGGAAGTAGAGAGAGGGATGACCATGATCGAGATAGAGGAAGAGACAGGGATAGGAGAAGGAGAATGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1 Surp cwf21

Protein Analysis

980

Amino Acids

110.95

Weight (kDa)

6.04

Isoelectric Point (pI)

54.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	189 - 261	7.9e-11	RNA recognition motif
Surp	PF01805	334 - 386	2.1e-15	Surp module
CID	PF04818	451 - 579	7.6e-08	CID domain
cwf21	PF08312	820 - 865	4.4e-08	cwf21 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009276)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10800 AT5G25060
fragaria_vesca	FvH4_2g41230 FvH4_2g41230 FvH4_2g41230
malus_domestica	MD08G1054700.v1.1 MD15G1042300.v1.1
prunus_persica	Prupe.1G395500_v2.0.a1 Prupe.1G395500_v2.0.a1 Prupe.1G395500_v2.0.a1 Prupe.1G395500_v2.0.a1
pyrus_communis	pycom08g04510 pycom15g03940
rosa_chinensis	RchiOBHm_Chr6g0299281
rosa_laevigata	RLG00000011446
rosa_roxburghii	Rroxscaffold_7G00168830
rosa_rugosa	Rorug06G0286800
rosa_samantha	Rh6AG398300 Rh6BG406700 Rh6CG412800 Rh6DG399500
rosa_wichuraiana	Rw6G034860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1835
Acc36I	ACCTGC	2 cut(s)	838, 1835
Acc65I	GGTACC	1 cut(s)	1780
AccB1I	GGYRCC	3 cut(s)	872, 1780, 2700
AccBSI	CCGCTC	1 cut(s)	2527
AccI	GTMKAC	1 cut(s)	2086
AccII	CGCG	2 cut(s)	22, 165
AcoI	YGGCCR	3 cut(s)	452, 852, 1878
AcsI	RAATTY	6 cut(s)	463, 503, 601, 931, 1583, 2427
AcuI	CTGAAG	5 cut(s)	410, 690, 1857, 2199, 2565
AcyI	GRCGYC	1 cut(s)	685
AfaI	GTAC	2 cut(s)	1782, 2597
AflII	CTTAAG	2 cut(s)	1478, 1667
AjnI	CCWGG	1 cut(s)	841
AleI	CACNNNNGTG	1 cut(s)	2706
Alw21I	GWGCWC	4 cut(s)	8, 1266, 1536, 1552
Alw26I	GTCTC	9 cut(s)	363, 1478, 1528, 1968, 2473, 2745, 2775, 2799, 2904
ApeKI	GCWGC	6 cut(s)	737, 1292, 1436, 1871, 1895, 1944
ApoI	RAATTY	6 cut(s)	463, 503, 601, 931, 1583, 2427
ArsI	GACNNNNNNTTYG	2 cut(s)	1453, 1485
Asp700I	GAANNNNTTC	5 cut(s)	123, 580, 942, 1677, 2240
Asp718I	GGTACC	1 cut(s)	1780
AspLEI	GCGC	1 cut(s)	165
AspS9I	GGNCC	6 cut(s)	632, 893, 902, 1663, 2203, 2384
AsuC2I	CCSGG	2 cut(s)	2756, 2786
AsuHPI	GGTGA	6 cut(s)	224, 576, 986, 1814, 1859, 2390
AvaII	GGWCC	2 cut(s)	893, 2384
BaeGI	GKGCMC	1 cut(s)	2293
BalI	TGGCCA	2 cut(s)	854, 1880
BamHI	GGATCC	1 cut(s)	1227
BanI	GGYRCC	3 cut(s)	872, 1780, 2700
BanII	GRGCYC	2 cut(s)	8, 2821
BarI	GAAGNNNNNNTAC	4 cut(s)	1581, 1613, 2626, 2658
BauI	CACGAG	1 cut(s)	2292
BbsI	GAAGAC	1 cut(s)	35
Bbv12I	GWGCWC	4 cut(s)	8, 1266, 1536, 1552
BbvCI	CCTCAGC	2 cut(s)	81, 1659
BbvI	GCAGC	6 cut(s)	749, 1279, 1423, 1883, 1907, 1931
BciT130I	CCWGG	1 cut(s)	843
BclI	TGATCA	1 cut(s)	991
BcnI	CCSGG	2 cut(s)	2756, 2786
BcoDI	GTCTC	9 cut(s)	363, 1478, 1528, 1968, 2473, 2745, 2775, 2799, 2904
BfaI	CTAG	7 cut(s)	150, 477, 663, 924, 1278, 2094, 2613
BfmI	CTRYAG	3 cut(s)	804, 1293, 1945
BfrI	CTTAAG	2 cut(s)	1478, 1667
BfuAI	ACCTGC	2 cut(s)	838, 1835
Bme1390I	CCNGG	3 cut(s)	843, 2756, 2786
Bme18I	GGWCC	2 cut(s)	893, 2384
BmgT120I	GGNCC	6 cut(s)	632, 893, 902, 1663, 2203, 2384
BmiI	GGNNCC	6 cut(s)	172, 874, 1229, 1782, 2386, 2702
BmrFI	CCNGG	3 cut(s)	843, 2756, 2786
BmrI	ACTGGG	1 cut(s)	2382
BmuI	ACTGGG	1 cut(s)	2382
BpiI	GAAGAC	1 cut(s)	35
BpmI	CTGGAG	2 cut(s)	825, 1536
Bpu10I	CCTNAGC	4 cut(s)	81, 1161, 1260, 1659
BpuEI	CTTGAG	1 cut(s)	2540
BpuMI	CCSGG	2 cut(s)	2756, 2786
BsaBI	GATNNNNATC	2 cut(s)	546, 1629
BsaHI	GRCGYC	1 cut(s)	685
BsaI	GGTCTC	3 cut(s)	1478, 2745, 2775
BsaJI	CCNNGG	4 cut(s)	208, 1881, 1923, 2334
BsaWI	WCCGGW	1 cut(s)	982
BsaXI	ACNNNNNCTCC	2 cut(s)	2585, 2615
Bse1I	ACTGG	7 cut(s)	642, 945, 1216, 1553, 1712, 2217, 2388
Bse8I	GATNNNNATC	2 cut(s)	546, 1629
BseBI	CCWGG	1 cut(s)	843
BseDI	CCNNGG	4 cut(s)	208, 1881, 1923, 2334
BseJI	GATNNNNATC	2 cut(s)	546, 1629
BseMII	CTCAG	4 cut(s)	72, 1175, 1251, 1650
BseNI	ACTGG	7 cut(s)	642, 945, 1216, 1553, 1712, 2217, 2388
BseRI	GAGGAG	5 cut(s)	68, 338, 398, 1402, 2537
BseSI	GKGCMC	1 cut(s)	2293
BseX3I	CGGCCG	1 cut(s)	452
BseXI	GCAGC	6 cut(s)	749, 1279, 1423, 1883, 1907, 1931
BseYI	CCCAGC	1 cut(s)	1439
BsgI	GTGCAG	1 cut(s)	816
Bsh1236I	CGCG	2 cut(s)	22, 165
Bsh1285I	CGRYCG	1 cut(s)	455
BshNI	GGYRCC	3 cut(s)	872, 1780, 2700
BsiEI	CGRYCG	1 cut(s)	455
BsiHKAI	GWGCWC	4 cut(s)	8, 1266, 1536, 1552
BsiSI	CCGG	3 cut(s)	983, 2755, 2785
BslFI	GGGAC	6 cut(s)	944, 2148, 2370, 2771, 2867, 2873
BsmAI	GTCTC	9 cut(s)	363, 1478, 1528, 1968, 2473, 2745, 2775, 2799, 2904
BsmBI	CGTCTC	1 cut(s)	2473
BsmFI	GGGAC	6 cut(s)	944, 2148, 2370, 2771, 2867, 2873
BsmI	GAATGC	1 cut(s)	142
Bso31I	GGTCTC	3 cut(s)	1478, 2745, 2775
Bsp1286I	GDGCHC	6 cut(s)	8, 1266, 1536, 1552, 2293, 2821
Bsp19I	CCATGG	2 cut(s)	1881, 1923
BspCNI	CTCAG	4 cut(s)	73, 1174, 1252, 1651
BspFNI	CGCG	2 cut(s)	22, 165
BspHI	TCATGA	2 cut(s)	714, 1203
BspLI	GGNNCC	6 cut(s)	172, 874, 1229, 1782, 2386, 2702
BspMAI	CTGCAG	2 cut(s)	1297, 1949
BspMI	ACCTGC	2 cut(s)	838, 1835
BspT107I	GGYRCC	3 cut(s)	872, 1780, 2700
BspTI	CTTAAG	2 cut(s)	1478, 1667
BspTNI	GGTCTC	3 cut(s)	1478, 2745, 2775
BsrBI	CCGCTC	1 cut(s)	2527
BsrI	ACTGG	7 cut(s)	642, 945, 1216, 1553, 1712, 2217, 2388
BssECI	CCNNGG	4 cut(s)	208, 1881, 1923, 2334
BssNI	GRCGYC	1 cut(s)	685
BssSI	CACGAG	1 cut(s)	2292
BssT1I	CCWWGG	4 cut(s)	208, 1881, 1923, 2334
Bst2BI	CACGAG	1 cut(s)	2292
Bst2UI	CCWGG	1 cut(s)	843
Bst4CI	ACNGT	4 cut(s)	880, 973, 2139, 2309
Bst6I	CTCTTC	7 cut(s)	54, 68, 311, 666, 1245, 2007, 2902
BstACI	GRCGYC	1 cut(s)	685
BstAFI	CTTAAG	2 cut(s)	1478, 1667
BstAPI	GCANNNNNTGC	1 cut(s)	1850
BstC8I	GCNNGC	5 cut(s)	97, 145, 1307, 1371, 1746
BstDEI	CTNAG	6 cut(s)	81, 1161, 1260, 1659, 2003, 2453
BstDSI	CCRYGG	2 cut(s)	1881, 1923
BstFNI	CGCG	2 cut(s)	22, 165
BstHHI	GCGC	1 cut(s)	165
BstMAI	GTCTC	9 cut(s)	363, 1478, 1528, 1968, 2473, 2745, 2775, 2799, 2904
BstMCI	CGRYCG	1 cut(s)	455
BstMWI	GCNNNNNNNGC	7 cut(s)	448, 830, 1183, 1436, 1850, 1877, 2712
BstNI	CCWGG	1 cut(s)	843
BstSCI	CCNGG	3 cut(s)	841, 2754, 2784
BstSFI	CTRYAG	3 cut(s)	804, 1293, 1945
BstSLI	GKGCMC	1 cut(s)	2293
BstUI	CGCG	2 cut(s)	22, 165
BstV1I	GCAGC	6 cut(s)	749, 1279, 1423, 1883, 1907, 1931
BstV2I	GAAGAC	1 cut(s)	35
BstX2I	RGATCY	2 cut(s)	1227, 2125
BstYI	RGATCY	2 cut(s)	1227, 2125
BstZI	CGGCCG	1 cut(s)	452
BtgI	CCRYGG	2 cut(s)	1881, 1923
BtgZI	GCGATG	1 cut(s)	2558
BtsI	GCAGTG	3 cut(s)	1552, 1653, 2713
BtsIMutI	CAGTG	8 cut(s)	649, 876, 1332, 1552, 1560, 1653, 2314, 2713
BveI	ACCTGC	2 cut(s)	838, 1835
Cac8I	GCNNGC	5 cut(s)	97, 145, 1307, 1371, 1746
CciI	TCATGA	2 cut(s)	714, 1203
CfoI	GCGC	1 cut(s)	165
Cfr13I	GGNCC	6 cut(s)	632, 893, 902, 1663, 2203, 2384
CseI	GACGC	2 cut(s)	674, 1950
Csp6I	GTAC	2 cut(s)	1781, 2596
CspCI	CAANNNNNGTGG	4 cut(s)	267, 302, 1486, 1521
CviAII	CATG	8 cut(s)	715, 1004, 1204, 1516, 1882, 1924, 2822, 2891
CviQI	GTAC	2 cut(s)	1781, 2596
DdeI	CTNAG	6 cut(s)	81, 1161, 1260, 1659, 2003, 2453
EaeI	YGGCCR	3 cut(s)	452, 852, 1878
EagI	CGGCCG	1 cut(s)	452
Eam1104I	CTCTTC	7 cut(s)	54, 68, 311, 666, 1245, 2007, 2902
EarI	CTCTTC	7 cut(s)	54, 68, 311, 666, 1245, 2007, 2902
EciI	GGCGGA	1 cut(s)	183
Ecl136II	GAGCTC	1 cut(s)	6
EclXI	CGGCCG	1 cut(s)	452
Eco130I	CCWWGG	4 cut(s)	208, 1881, 1923, 2334
Eco24I	GRGCYC	2 cut(s)	8, 2821
Eco31I	GGTCTC	3 cut(s)	1478, 2745, 2775
Eco47I	GGWCC	2 cut(s)	893, 2384
Eco52I	CGGCCG	1 cut(s)	452
Eco53kI	GAGCTC	1 cut(s)	6
Eco57I	CTGAAG	5 cut(s)	410, 690, 1857, 2199, 2565
EcoICRI	GAGCTC	1 cut(s)	6
EcoO109I	RGGNCCY	1 cut(s)	1663
EcoRI	GAATTC	3 cut(s)	463, 931, 2427
EcoRII	CCWGG	1 cut(s)	841
EcoT14I	CCWWGG	4 cut(s)	208, 1881, 1923, 2334
EcoT22I	ATGCAT	1 cut(s)	1567
EcoT38I	GRGCYC	2 cut(s)	8, 2821
ErhI	CCWWGG	4 cut(s)	208, 1881, 1923, 2334
Esp3I	CGTCTC	1 cut(s)	2473
FaeI	CATG	8 cut(s)	718, 1007, 1207, 1519, 1885, 1927, 2825, 2894
FalI	AAGNNNNNCTT	2 cut(s)	20, 52
FaqI	GGGAC	6 cut(s)	944, 2148, 2370, 2771, 2867, 2873
FatI	CATG	8 cut(s)	714, 1003, 1203, 1515, 1881, 1923, 2821, 2890
FauI	CCCGC	4 cut(s)	1239, 1737, 2520, 2790
FauNDI	CATATG	2 cut(s)	849, 1288
FbaI	TGATCA	1 cut(s)	991
FblI	GTMKAC	1 cut(s)	2086
FriOI	GRGCYC	2 cut(s)	8, 2821
FspBI	CTAG	7 cut(s)	150, 477, 663, 924, 1278, 2094, 2613
GlaI	GCGC	1 cut(s)	164
GsaI	CCCAGC	1 cut(s)	1443
GsuI	CTGGAG	2 cut(s)	825, 1536
HapII	CCGG	3 cut(s)	983, 2755, 2785
HgaI	GACGC	2 cut(s)	674, 1950
HhaI	GCGC	1 cut(s)	165
Hin1I	GRCGYC	1 cut(s)	685
Hin1II	CATG	8 cut(s)	718, 1007, 1207, 1519, 1885, 1927, 2825, 2894
Hin6I	GCGC	1 cut(s)	163
HinP1I	GCGC	1 cut(s)	163
HpaII	CCGG	3 cut(s)	983, 2755, 2785
HphI	GGTGA	6 cut(s)	224, 576, 986, 1814, 1859, 2390
Hpy166II	GTNNAC	4 cut(s)	434, 2087, 2222, 2450
Hpy8I	GTNNAC	4 cut(s)	434, 2087, 2222, 2450
HpyCH4III	ACNGT	4 cut(s)	880, 973, 2139, 2309
HpyCH4IV	ACGT	2 cut(s)	430, 2482
HpyF10VI	GCNNNNNNNGC	7 cut(s)	448, 830, 1183, 1436, 1850, 1877, 2712
HpyF3I	CTNAG	6 cut(s)	81, 1161, 1260, 1659, 2003, 2453
HpySE526I	ACGT	2 cut(s)	430, 2482
Hsp92I	GRCGYC	1 cut(s)	685
Hsp92II	CATG	8 cut(s)	718, 1007, 1207, 1519, 1885, 1927, 2825, 2894
HspAI	GCGC	1 cut(s)	163
KpnI	GGTACC	1 cut(s)	1784
Ksp22I	TGATCA	1 cut(s)	991
LmnI	GCTCC	7 cut(s)	11, 385, 1539, 1555, 1892, 1906, 2524
Lsp1109I	GCAGC	6 cut(s)	749, 1279, 1423, 1883, 1907, 1931
MaeI	CTAG	7 cut(s)	150, 477, 663, 924, 1278, 2094, 2613
MaeII	ACGT	2 cut(s)	430, 2482
MaeIII	GTNAC	4 cut(s)	825, 910, 2730, 2834
MbiI	CCGCTC	1 cut(s)	2527
MflI	RGATCY	2 cut(s)	1227, 2125
MhlI	GDGCHC	6 cut(s)	8, 1266, 1536, 1552, 2293, 2821
MlsI	TGGCCA	2 cut(s)	854, 1880
MluNI	TGGCCA	2 cut(s)	854, 1880
MlyI	GAGTC	6 cut(s)	25, 1283, 1325, 1399, 1468, 1506
MmeI	TCCRAC	2 cut(s)	553, 1299
Mox20I	TGGCCA	2 cut(s)	854, 1880
Mph1103I	ATGCAT	1 cut(s)	1567
MroXI	GAANNNNTTC	5 cut(s)	123, 580, 942, 1677, 2240
MscI	TGGCCA	2 cut(s)	854, 1880
MseI	TTAA	6 cut(s)	195, 1376, 1479, 1620, 1668, 2348
MslI	CAYNNNNRTG	2 cut(s)	441, 2706
Msp20I	TGGCCA	2 cut(s)	854, 1880
MspA1I	CMGCKG	1 cut(s)	2797
MspCI	CTTAAG	2 cut(s)	1478, 1667
MspI	CCGG	3 cut(s)	983, 2755, 2785
MspR9I	CCNGG	3 cut(s)	843, 2756, 2786
Mva1269I	GAATGC	1 cut(s)	142
MvaI	CCWGG	1 cut(s)	843
MvnI	CGCG	2 cut(s)	22, 165
MwoI	GCNNNNNNNGC	7 cut(s)	448, 830, 1183, 1436, 1850, 1877, 2712
NciI	CCSGG	2 cut(s)	2756, 2786
NcoI	CCATGG	2 cut(s)	1881, 1923
NdeI	CATATG	2 cut(s)	849, 1288
NlaIII	CATG	8 cut(s)	718, 1007, 1207, 1519, 1885, 1927, 2825, 2894
NlaIV	GGNNCC	6 cut(s)	172, 874, 1229, 1782, 2386, 2702
NmuCI	GTSAC	1 cut(s)	910
NsiI	ATGCAT	1 cut(s)	1567
OliI	CACNNNNGTG	1 cut(s)	2706
PagI	TCATGA	2 cut(s)	714, 1203
PaqCI	CACCTGC	1 cut(s)	1835
PctI	GAATGC	1 cut(s)	142
PdmI	GAANNNNTTC	5 cut(s)	123, 580, 942, 1677, 2240
PfoI	TCCNGGA	1 cut(s)	841
PleI	GAGTC	6 cut(s)	25, 1282, 1324, 1398, 1468, 1506
PpsI	GAGTC	6 cut(s)	25, 1282, 1324, 1398, 1468, 1506
Psp124BI	GAGCTC	1 cut(s)	8
Psp6I	CCWGG	1 cut(s)	841
PspFI	CCCAGC	1 cut(s)	1439
PspGI	CCWGG	1 cut(s)	841
PspN4I	GGNNCC	6 cut(s)	172, 874, 1229, 1782, 2386, 2702
PspPI	GGNCC	6 cut(s)	632, 893, 902, 1663, 2203, 2384
PstI	CTGCAG	2 cut(s)	1297, 1949
PsuI	RGATCY	2 cut(s)	1227, 2125
RsaI	GTAC	2 cut(s)	1782, 2597
RsaNI	GTAC	2 cut(s)	1781, 2596
RseI	CAYNNNNRTG	2 cut(s)	441, 2706
SacI	GAGCTC	1 cut(s)	8
SaqAI	TTAA	6 cut(s)	195, 1376, 1479, 1620, 1668, 2348
Sau96I	GGNCC	6 cut(s)	632, 893, 902, 1663, 2203, 2384
SchI	GAGTC	6 cut(s)	25, 1283, 1325, 1399, 1468, 1506
ScrFI	CCNGG	3 cut(s)	843, 2756, 2786
SduI	GDGCHC	6 cut(s)	8, 1266, 1536, 1552, 2293, 2821
SfcI	CTRYAG	3 cut(s)	804, 1293, 1945
SinI	GGWCC	2 cut(s)	893, 2384
SmiMI	CAYNNNNRTG	2 cut(s)	441, 2706
SmlI	CTYRAG	3 cut(s)	1478, 1667, 2519
SmoI	CTYRAG	3 cut(s)	1478, 1667, 2519
SspI	AATATT	1 cut(s)	2116
SspMI	CTAG	7 cut(s)	150, 477, 663, 924, 1278, 2094, 2613
SstI	GAGCTC	1 cut(s)	8
StyD4I	CCNGG	3 cut(s)	841, 2754, 2784
StyI	CCWWGG	4 cut(s)	208, 1881, 1923, 2334
TaaI	ACNGT	4 cut(s)	880, 973, 2139, 2309
TaiI	ACGT	2 cut(s)	433, 2485
TaqI	TCGA	5 cut(s)	361, 1510, 1978, 2101, 2896
TaqII	GACCGA	2 cut(s)	215, 1749
TauI	GCSGC	4 cut(s)	143, 168, 454, 2701
Tru1I	TTAA	6 cut(s)	195, 1376, 1479, 1620, 1668, 2348
Tru9I	TTAA	6 cut(s)	195, 1376, 1479, 1620, 1668, 2348
TscAI	CASTG	8 cut(s)	649, 883, 1339, 1552, 1560, 1660, 2314, 2713
TseFI	GTSAC	1 cut(s)	910
TseI	GCWGC	6 cut(s)	737, 1292, 1436, 1871, 1895, 1944
Tsp45I	GTSAC	1 cut(s)	910
TspGWI	ACGGA	2 cut(s)	694, 1478
TspRI	CASTG	8 cut(s)	649, 883, 1339, 1552, 1560, 1660, 2314, 2713
Vha464I	CTTAAG	2 cut(s)	1478, 1667
VpaK11BI	GGWCC	2 cut(s)	893, 2384
XapI	RAATTY	6 cut(s)	463, 503, 601, 931, 1583, 2427
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1796, 2283
XmiI	GTMKAC	1 cut(s)	2086
XmnI	GAANNNNTTC	5 cut(s)	123, 580, 942, 1677, 2240
XspI	CTAG	7 cut(s)	150, 477, 663, 924, 1278, 2094, 2613
Zsp2I	ATGCAT	1 cut(s)	1567

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.