RLG00000011446

U2 snRNP-associated SURP motif-containing

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
9499779 .. 9506679
6901 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011446

Sequence Viewer

Length: 2946 bp
ATGAGCTCCTTCTTCATCACGCGGAAGAAGACCCCCTTCCAAAAGCACAGAGAGGAGGAAGAGGCCAAGAAAAAGAGAGCGGAGGATGAAACAGCTCGGTTATATGCGGAGTTCGTGGAGTCTTTTCAAGGGGATAATGCACCTGGCTCAAAGGCTTTTGTGCGAGGAGGGACCATCAATCCCAATGAAAGGGTTAAGGCTGATTCCCAAGGTGAAAAGTCCAAAGATGGGGTATCTGTTCCAAAGAAGGGGAGTAGGTATGTGCCATCTTTCTTACCACCTCCTTTGGCATCCAAAGGGAAAGAATCTGATAAGAAGAGGGAGGAGGAAAAGCCGAAGGAAAAAGAGAAGGGGAAGTCTCGAAACATAGATCACTTTATGGAGGAGCTGAAGCACGAGCAGGAATTGAGGGAGAGGCGAAATCAAGACCGTGAACATTGGCGTGATGGGCGGCCGAACGATAGTTCTGTGGCCTCTAGTCGTTTTGATGAAATGCCTGATGAATTTGATCCAAGTGGAAAACTTCTCGGATCATTTGATGATGGCGATCCACAAACTACTAATTTATATGTTGGAAATCTTTCACCAAAGGTTGATGAAAATTTTCTTTTACGAACTTTTGGAAGATTTGGGCCTATTGCCAGCGTGAAAATAATGTGGCCTAGGACTGAAGAGGAACGGAGGCGTCAAAGGAATTGTGGCTTTGTAGCTTTCATGAATAGAGCTGATGGACAGGCAGCAAAGGATGAAATGCAAGGTGTAGTTGTTTATGAGTATGAGTTGAAGATTGGATGGGGGAAGTCTGTAGCTCTCCCATCACAAGCGTTACCTGCACCCCCTCCAGGACATATGGCCATCAGGAGTAAGGAGGGTGCCACTGTAGTTTTGTCTGGTCCATCAGGCCCACCTGTCACCTCTGTTCCTAGTCAGAATTCCGAACTGGTTCTTACCCCAAATGTTCCTGATATAACGGTTGTTCCGCCGGAAGATGATCACCTTCGCCATGTGATTGATACAATGGCTTTGTATGTTCTGGATGGTGGATGTGCGTTTGAACAAGCTATTATGGAGAGAGGCAGAGGGAATCCTCTTTTCCATTTTTTGTTTGAACTTGGATCAAAAGAGCATACTTACTATGTTTGGAGGCTTTATTCATTTGCTCAGGGCGATACGCTGCAAAGGTGGCGAACTGAACCTTTCATTATGATTACTGGTAGTGGAAGATGGATCCCACCATCTCTTCCAACATTAAAAAGCCCTGAGCACGAAAAAGAGTCTGGTAGCACTTTTGCTGCAGGGAGAAGCAGGCGTGTAGAGTCAGAACGAACGCTCACTGATCCACAAAGGGATGAGTTTGAGGATATGTTGCGCGCATTAACATTAGAGAGGAGTCAGATAAAGGATGCTATGGGGTTTGCATTGGATAATGCTGATGCTGCTGGGGAGATAGTTGAGGTTCTGACAGAATCTTTGACTCTTAAGGAGACCCTTATCCCAACCAAAGTTGCTAGACTCATGCTTGTCTCTGATGTGCTTCACAATAGCAGCGCTCCAGTGAAAAATGCATCTGCATACCGCACCAAATTTGAAGCAACATTACCAGACATAATGGAGAGCTTTAATGATTTGTACCGTAGCATTACGGGAAGGATCACTGCCGAGGCCCTTAAGGAAAGAGTTCTGAAAGTATTGCAAGTATGGTCAGACTGGTTTCTTTTTTCAGATGCCTATGTCAATGGATTGCGGGCTACTTTTCTTCGGTCTGGGAACTCTGGTGTGGTCCCCTTCCACTCTGTATGTGGTGATGCACCTGATATAGAGAAAAAGACTACTGAAGATGCAGGTGATGCTGCTAAAACTAACCAAGATGCTGCTTTGGCCATGGGCAAAGGAGCAGCTATGAGGGAGTTGTTGAACCTTCCCATGGCTGAATTAGAAAGACGCTGCAGACATAATGGATTGTCTCTTGTTGGTGGTCGAGAAATGATGGTTGCACGATTGCTTAGTCTGGAAGAGGCAGAAAAACAGAGGGGCTATGAACTAGATGATGACTTGAAATATGCACAGAACCATTCAAGTTCAGCTAGACATTCGAGTAGTCGAAAAGAAATGAATATTGAACCAGATCCATTGGGACTGTCTGGATGGAATCGTTATGTAGAGGATGAGATACAGCCTCAACGGAAAGGGTCTTTATCAATGGCCCAGACCCATACCAGTCCACAACCTGAACTAAAACCTTTAACCAAGAAAGAAAAAAGTGATCCTGTTCTAACGGCCTCTAAATGGGCCCGAGAGGATGATGACAGTGATGATGACCAAAAGCGAAGTGACAAGGGTCTCGGGTTAAGTTACTCATCTTCAGGAAGTGAAAATACTGGTGATGGTCCCAGTAAAGCTGATGAGATGGAGGTTGCTGCTGATGCAAGAATTCCAGCACTGCCTGATAGTGGTGGATTAAGTGAGGAGCAGAGGCAAAAGTTGAGACGTTTGGAAGTTGCTCTGATAGAATATCGTGAATCTCTTGAGGAGCGGGGAATTAAAAGTCCTGAAGAAATTGAGAGGAAGGTTGCAATACATCGCAAACGACTTGAATCGGAGTACGGGTTATCTGATTCTAGCGAAGATGCTTCTGGGCGTAAGAGGACTTCTTCCGAGAGGAAGGACAGAAGGGATGATGATTCCCGTGATGCTTCAAGAAAGCGGCACCGCAGCGGGAGCCAAAGTGATAGCCCGTTACAGAAATCATCAAGCAGAGACCGGGACAGGGAATATGATTTGGATAGAGACCGAGAAAGACAGCGGGATAGAGACAGAGATAGAGCCCATGATTTTGAAGGTGACAGGGGGAGGGATTGGGACAGGGAGAAGAGTGGAAGTAGAGAGAGGGATGACCATGATAGAGATAGAGGAAGAGACAGGGATAGGAGAAGGAGAATGAAATGA

Protein Analysis

982

Amino Acids

111.1

Weight (kDa)

6.06

Isoelectric Point (pI)

53.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 189 - 261 9e-11 RNA recognition motif
Surp PF01805 334 - 386 2.3e-15 Surp module
CID PF04818 451 - 579 2.2e-07 CID domain
cwf21 PF08312 822 - 867 3.9e-08 cwf21 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1832
Acc36I ACCTGC 2 cut(s) 838, 1832
AccB1I GGYRCC 2 cut(s) 872, 2706
AccBSI CCGCTC 2 cut(s) 80, 2533
AccII CGCG 2 cut(s) 22, 1371
AcoI YGGCCR 3 cut(s) 452, 852, 1878
AcsI RAATTY 5 cut(s) 503, 601, 931, 1583, 2430
AcuI CTGAAG 5 cut(s) 410, 690, 1854, 2346, 2571
AcyI GRCGYC 1 cut(s) 685
AfaI GTAC 2 cut(s) 1631, 2603
AfeI AGCGCT 1 cut(s) 1549
AfiI CCNNNNNNNGG 8 cut(s) 189, 228, 248, 842, 1924, 2286, 2450, 2767
AflII CTTAAG 2 cut(s) 1478, 1667
AjnI CCWGG 2 cut(s) 142, 841
Alw21I GWGCWC 2 cut(s) 8, 1266
Ama87I CYCGRG 2 cut(s) 2292, 2342
Aor51HI AGCGCT 1 cut(s) 1549
ApaI GGGCCC 1 cut(s) 2293
ApoI RAATTY 5 cut(s) 503, 601, 931, 1583, 2430
ArsI GACNNNNNNTTYG 2 cut(s) 1453, 1485
Asp700I GAANNNNTTC 4 cut(s) 580, 603, 942, 1677
AspA2I CCTAGG 1 cut(s) 662
AspLEI GCGC 3 cut(s) 1371, 1373, 1550
AsuC2I CCSGG 1 cut(s) 2762
AsuHPI GGTGA 8 cut(s) 224, 576, 904, 986, 1814, 1856, 2393, 2852
AvaI CYCGRG 2 cut(s) 2292, 2342
AvaII GGWCC 4 cut(s) 171, 893, 1780, 2387
AvrII CCTAGG 1 cut(s) 662
BaeGI GKGCMC 1 cut(s) 2293
BalI TGGCCA 2 cut(s) 854, 1880
BamHI GGATCC 1 cut(s) 1227
BanI GGYRCC 2 cut(s) 872, 2706
BanII GRGCYC 3 cut(s) 8, 2293, 2827
BarI GAAGNNNNNNTAC 6 cut(s) 1581, 1613, 2359, 2391, 2632, 2664
BauI CACGAG 1 cut(s) 395
BbsI GAAGAC 1 cut(s) 35
Bbv12I GWGCWC 2 cut(s) 8, 1266
BceAI ACGGC 1 cut(s) 2292
BciT130I CCWGG 2 cut(s) 144, 843
BclI TGATCA 1 cut(s) 991
BcnI CCSGG 1 cut(s) 2762
BfaI CTAG 7 cut(s) 477, 663, 924, 1509, 2042, 2085, 2619
BfmI CTRYAG 4 cut(s) 804, 879, 1293, 1945
BfoI RGCGCY 1 cut(s) 1551
BfrI CTTAAG 2 cut(s) 1478, 1667
BfuAI ACCTGC 2 cut(s) 838, 1832
BlnI CCTAGG 1 cut(s) 662
Bme1390I CCNGG 3 cut(s) 144, 843, 2762
Bme18I GGWCC 4 cut(s) 171, 893, 1780, 2387
BmeT110I CYCGRG 2 cut(s) 2292, 2342
BmiI GGNNCC 8 cut(s) 172, 874, 1229, 1782, 2291, 2389, 2708, 2720
BmrFI CCNGG 3 cut(s) 144, 843, 2762
BmrI ACTGGG 1 cut(s) 2385
BmuI ACTGGG 1 cut(s) 2385
BoxI GACNNNNGTC 1 cut(s) 2337
BpiI GAAGAC 1 cut(s) 35
BpmI CTGGAG 2 cut(s) 825, 1536
Bpu10I CCTNAGC 2 cut(s) 1161, 1260
BpuEI CTTGAG 1 cut(s) 2546
BpuMI CCSGG 1 cut(s) 2762
BsaBI GATNNNNATC 1 cut(s) 546
BsaHI GRCGYC 1 cut(s) 685
BsaI GGTCTC 4 cut(s) 1478, 2345, 2751, 2781
BsaJI CCNNGG 5 cut(s) 208, 662, 1659, 1881, 1923
BsaXI ACNNNNNCTCC 4 cut(s) 2591, 2621, 2710, 2740
Bsc4I CCNNNNNNNGG 8 cut(s) 189, 228, 248, 842, 1924, 2286, 2450, 2767
Bse1I ACTGG 7 cut(s) 945, 1216, 1553, 1712, 2217, 2383, 2391
Bse8I GATNNNNATC 1 cut(s) 546
BseBI CCWGG 2 cut(s) 144, 843
BseDI CCNNGG 5 cut(s) 208, 662, 1659, 1881, 1923
BseJI GATNNNNATC 1 cut(s) 546
BseLI CCNNNNNNNGG 8 cut(s) 189, 228, 248, 842, 1924, 2286, 2450, 2767
BseMII CTCAG 2 cut(s) 1175, 1251
BseNI ACTGG 7 cut(s) 945, 1216, 1553, 1712, 2217, 2383, 2391
BsePI GCGCGC 1 cut(s) 1369
BseRI GAGGAG 7 cut(s) 68, 180, 338, 398, 1402, 2480, 2543
BseSI GKGCMC 1 cut(s) 2293
BseX3I CGGCCG 1 cut(s) 452
BseYI CCCAGC 1 cut(s) 1439
BsgI GTGCAG 1 cut(s) 816
Bsh1236I CGCG 2 cut(s) 22, 1371
Bsh1285I CGRYCG 1 cut(s) 455
BshNI GGYRCC 2 cut(s) 872, 2706
BsiEI CGRYCG 1 cut(s) 455
BsiHKAI GWGCWC 2 cut(s) 8, 1266
BsiHKCI CYCGRG 2 cut(s) 2292, 2342
BsiSI CCGG 2 cut(s) 983, 2761
BslFI GGGAC 6 cut(s) 184, 1766, 2148, 2373, 2777, 2873
BslI CCNNNNNNNGG 8 cut(s) 189, 228, 248, 842, 1924, 2286, 2450, 2767
BsmBI CGTCTC 1 cut(s) 2479
BsmFI GGGAC 6 cut(s) 184, 1766, 2148, 2373, 2777, 2873
Bso31I GGTCTC 4 cut(s) 1478, 2345, 2751, 2781
BsoBI CYCGRG 2 cut(s) 2292, 2342
Bsp120I GGGCCC 1 cut(s) 2289
Bsp1286I GDGCHC 4 cut(s) 8, 1266, 2293, 2827
Bsp19I CCATGG 2 cut(s) 1881, 1923
BspCNI CTCAG 2 cut(s) 1174, 1252
BspFNI CGCG 2 cut(s) 22, 1371
BspHI TCATGA 1 cut(s) 714
BspLI GGNNCC 8 cut(s) 172, 874, 1229, 1782, 2291, 2389, 2708, 2720
BspMAI CTGCAG 2 cut(s) 1297, 1949
BspMI ACCTGC 2 cut(s) 838, 1832
BspT107I GGYRCC 2 cut(s) 872, 2706
BspTI CTTAAG 2 cut(s) 1478, 1667
BspTNI GGTCTC 4 cut(s) 1478, 2345, 2751, 2781
BsrBI CCGCTC 2 cut(s) 80, 2533
BsrI ACTGG 7 cut(s) 945, 1216, 1553, 1712, 2217, 2383, 2391
BssECI CCNNGG 5 cut(s) 208, 662, 1659, 1881, 1923
BssHII GCGCGC 1 cut(s) 1369
BssNI GRCGYC 1 cut(s) 685
BssSI CACGAG 1 cut(s) 395
BssT1I CCWWGG 4 cut(s) 208, 662, 1881, 1923
Bst2BI CACGAG 1 cut(s) 395
Bst2UI CCWGG 2 cut(s) 144, 843
Bst4CI ACNGT 6 cut(s) 431, 880, 973, 1634, 2139, 2309
Bst6I CTCTTC 7 cut(s) 54, 311, 666, 1245, 2007, 2864, 2908
BstACI GRCGYC 1 cut(s) 685
BstAFI CTTAAG 2 cut(s) 1478, 1667
BstAPI GCANNNNNTGC 1 cut(s) 1847
BstC8I GCNNGC 4 cut(s) 643, 1307, 1371, 1746
BstDEI CTNAG 3 cut(s) 1161, 1260, 2003
BstDSI CCRYGG 2 cut(s) 1881, 1923
BstFNI CGCG 2 cut(s) 22, 1371
BstH2I RGCGCY 1 cut(s) 1551
BstHHI GCGC 3 cut(s) 1371, 1373, 1550
BstMCI CGRYCG 1 cut(s) 455
BstMWI GCNNNNNNNGC 8 cut(s) 448, 830, 1183, 1436, 1847, 1877, 2423, 2718
BstNI CCWGG 2 cut(s) 144, 843
BstPAI GACNNNNGTC 1 cut(s) 2337
BstSCI CCNGG 3 cut(s) 142, 841, 2760
BstSFI CTRYAG 4 cut(s) 804, 879, 1293, 1945
BstSLI GKGCMC 1 cut(s) 2293
BstUI CGCG 2 cut(s) 22, 1371
BstV2I GAAGAC 1 cut(s) 35
BstX2I RGATCY 2 cut(s) 1227, 2125
BstYI RGATCY 2 cut(s) 1227, 2125
BstZI CGGCCG 1 cut(s) 452
BtgI CCRYGG 2 cut(s) 1881, 1923
BtgZI GCGATG 1 cut(s) 2564
BtsI GCAGTG 2 cut(s) 1653, 2438
BtsIMutI CAGTG 6 cut(s) 876, 1332, 1560, 1653, 2314, 2438
BveI ACCTGC 2 cut(s) 838, 1832
Cac8I GCNNGC 4 cut(s) 643, 1307, 1371, 1746
CciI TCATGA 1 cut(s) 714
CfoI GCGC 3 cut(s) 1371, 1373, 1550
CseI GACGC 2 cut(s) 674, 1950
Csp6I GTAC 2 cut(s) 1630, 2602
CspCI CAANNNNNGTGG 2 cut(s) 267, 302
CviAII CATG 7 cut(s) 715, 1004, 1516, 1882, 1924, 2828, 2897
CviQI GTAC 2 cut(s) 1630, 2602
DdeI CTNAG 3 cut(s) 1161, 1260, 2003
EaeI YGGCCR 3 cut(s) 452, 852, 1878
EagI CGGCCG 1 cut(s) 452
Eam1104I CTCTTC 7 cut(s) 54, 311, 666, 1245, 2007, 2864, 2908
EarI CTCTTC 7 cut(s) 54, 311, 666, 1245, 2007, 2864, 2908
EciI GGCGGA 1 cut(s) 969
Ecl136II GAGCTC 1 cut(s) 6
EclXI CGGCCG 1 cut(s) 452
Eco130I CCWWGG 4 cut(s) 208, 662, 1881, 1923
Eco24I GRGCYC 3 cut(s) 8, 2293, 2827
Eco31I GGTCTC 4 cut(s) 1478, 2345, 2751, 2781
Eco47I GGWCC 4 cut(s) 171, 893, 1780, 2387
Eco47III AGCGCT 1 cut(s) 1549
Eco52I CGGCCG 1 cut(s) 452
Eco53kI GAGCTC 1 cut(s) 6
Eco57I CTGAAG 5 cut(s) 410, 690, 1854, 2346, 2571
Eco88I CYCGRG 2 cut(s) 2292, 2342
EcoICRI GAGCTC 1 cut(s) 6
EcoO109I RGGNCCY 1 cut(s) 1663
EcoRI GAATTC 2 cut(s) 931, 2430
EcoRII CCWGG 2 cut(s) 142, 841
EcoT14I CCWWGG 4 cut(s) 208, 662, 1881, 1923
EcoT22I ATGCAT 1 cut(s) 1567
EcoT38I GRGCYC 3 cut(s) 8, 2293, 2827
ErhI CCWWGG 4 cut(s) 208, 662, 1881, 1923
Esp3I CGTCTC 1 cut(s) 2479
FaeI CATG 7 cut(s) 718, 1007, 1519, 1885, 1927, 2831, 2900
FalI AAGNNNNNCTT 2 cut(s) 20, 52
FaqI GGGAC 6 cut(s) 184, 1766, 2148, 2373, 2777, 2873
FatI CATG 7 cut(s) 714, 1003, 1515, 1881, 1923, 2827, 2896
FauI CCCGC 4 cut(s) 1737, 2526, 2708, 2796
FauNDI CATATG 1 cut(s) 849
FbaI TGATCA 1 cut(s) 991
FriOI GRGCYC 3 cut(s) 8, 2293, 2827
FspBI CTAG 7 cut(s) 477, 663, 924, 1509, 2042, 2085, 2619
GlaI GCGC 3 cut(s) 1370, 1372, 1549
GsaI CCCAGC 1 cut(s) 1443
GsuI CTGGAG 2 cut(s) 825, 1536
HaeII RGCGCY 1 cut(s) 1551
HapII CCGG 2 cut(s) 983, 2761
HgaI GACGC 2 cut(s) 674, 1950
HhaI GCGC 3 cut(s) 1371, 1373, 1550
Hin1I GRCGYC 1 cut(s) 685
Hin1II CATG 7 cut(s) 718, 1007, 1519, 1885, 1927, 2831, 2900
Hin6I GCGC 3 cut(s) 1369, 1371, 1548
HinP1I GCGC 3 cut(s) 1369, 1371, 1548
HpaII CCGG 2 cut(s) 983, 2761
HphI GGTGA 8 cut(s) 224, 576, 904, 986, 1814, 1856, 2393, 2852
Hpy166II GTNNAC 2 cut(s) 434, 2222
Hpy8I GTNNAC 2 cut(s) 434, 2222
HpyCH4III ACNGT 6 cut(s) 431, 880, 973, 1634, 2139, 2309
HpyCH4IV ACGT 1 cut(s) 2488
HpyF10VI GCNNNNNNNGC 8 cut(s) 448, 830, 1183, 1436, 1847, 1877, 2423, 2718
HpyF3I CTNAG 3 cut(s) 1161, 1260, 2003
HpySE526I ACGT 1 cut(s) 2488
Hsp92I GRCGYC 1 cut(s) 685
Hsp92II CATG 7 cut(s) 718, 1007, 1519, 1885, 1927, 2831, 2900
HspAI GCGC 3 cut(s) 1369, 1371, 1548
Ksp22I TGATCA 1 cut(s) 991
LmnI GCTCC 7 cut(s) 11, 385, 1555, 1892, 2467, 2530, 2718
MaeI CTAG 7 cut(s) 477, 663, 924, 1509, 2042, 2085, 2619
MaeII ACGT 1 cut(s) 2488
MaeIII GTNAC 6 cut(s) 825, 910, 2330, 2351, 2736, 2840
MbiI CCGCTC 2 cut(s) 80, 2533
MflI RGATCY 2 cut(s) 1227, 2125
MhlI GDGCHC 4 cut(s) 8, 1266, 2293, 2827
MlsI TGGCCA 2 cut(s) 854, 1880
MluNI TGGCCA 2 cut(s) 854, 1880
MlyI GAGTC 6 cut(s) 128, 1283, 1325, 1399, 1468, 1506
MmeI TCCRAC 2 cut(s) 553, 1268
Mox20I TGGCCA 2 cut(s) 854, 1880
Mph1103I ATGCAT 1 cut(s) 1567
MroXI GAANNNNTTC 4 cut(s) 580, 603, 942, 1677
MscI TGGCCA 2 cut(s) 854, 1880
MslI CAYNNNNRTG 1 cut(s) 441
Msp20I TGGCCA 2 cut(s) 854, 1880
MspA1I CMGCKG 2 cut(s) 2715, 2803
MspCI CTTAAG 2 cut(s) 1478, 1667
MspI CCGG 2 cut(s) 983, 2761
MspR9I CCNGG 3 cut(s) 144, 843, 2762
MvaI CCWGG 2 cut(s) 144, 843
MvnI CGCG 2 cut(s) 22, 1371
MwoI GCNNNNNNNGC 8 cut(s) 448, 830, 1183, 1436, 1847, 1877, 2423, 2718
NciI CCSGG 1 cut(s) 2762
NcoI CCATGG 2 cut(s) 1881, 1923
NdeI CATATG 1 cut(s) 849
NlaIII CATG 7 cut(s) 718, 1007, 1519, 1885, 1927, 2831, 2900
NlaIV GGNNCC 8 cut(s) 172, 874, 1229, 1782, 2291, 2389, 2708, 2720
NmeAIII GCCGAG 1 cut(s) 1684
NmuCI GTSAC 3 cut(s) 910, 2330, 2840
NsiI ATGCAT 1 cut(s) 1567
PagI TCATGA 1 cut(s) 714
PaqCI CACCTGC 1 cut(s) 1832
PauI GCGCGC 1 cut(s) 1369
PdmI GAANNNNTTC 4 cut(s) 580, 603, 942, 1677
PfeI GAWTC 9 cut(s) 203, 305, 1084, 1466, 2149, 2519, 2594, 2615, 2681
PfoI TCCNGGA 1 cut(s) 841
PleI GAGTC 6 cut(s) 127, 1282, 1324, 1398, 1468, 1506
PpsI GAGTC 6 cut(s) 127, 1282, 1324, 1398, 1468, 1506
PshAI GACNNNNGTC 1 cut(s) 2337
Psp124BI GAGCTC 1 cut(s) 8
Psp6I CCWGG 2 cut(s) 142, 841
PspFI CCCAGC 1 cut(s) 1439
PspGI CCWGG 2 cut(s) 142, 841
PspN4I GGNNCC 8 cut(s) 172, 874, 1229, 1782, 2291, 2389, 2708, 2720
PspOMI GGGCCC 1 cut(s) 2289
PstI CTGCAG 2 cut(s) 1297, 1949
PsuI RGATCY 2 cut(s) 1227, 2125
PteI GCGCGC 1 cut(s) 1369
RsaI GTAC 2 cut(s) 1631, 2603
RsaNI GTAC 2 cut(s) 1630, 2602
RseI CAYNNNNRTG 1 cut(s) 441
SacI GAGCTC 1 cut(s) 8
SchI GAGTC 6 cut(s) 128, 1283, 1325, 1399, 1468, 1506
ScrFI CCNGG 3 cut(s) 144, 843, 2762
SduI GDGCHC 4 cut(s) 8, 1266, 2293, 2827
SfcI CTRYAG 4 cut(s) 804, 879, 1293, 1945
SinI GGWCC 4 cut(s) 171, 893, 1780, 2387
SmiMI CAYNNNNRTG 1 cut(s) 441
SmlI CTYRAG 3 cut(s) 1478, 1667, 2525
SmoI CTYRAG 3 cut(s) 1478, 1667, 2525
SspI AATATT 1 cut(s) 2116
SspMI CTAG 7 cut(s) 477, 663, 924, 1509, 2042, 2085, 2619
SstI GAGCTC 1 cut(s) 8
StyD4I CCNGG 3 cut(s) 142, 841, 2760
StyI CCWWGG 4 cut(s) 208, 662, 1881, 1923
TaaI ACNGT 6 cut(s) 431, 880, 973, 1634, 2139, 2309
TaiI ACGT 1 cut(s) 2491
TaqI TCGA 4 cut(s) 361, 1978, 2093, 2101
TaqII GACCGA 2 cut(s) 1749, 2805
TauI GCSGC 2 cut(s) 454, 2707
TfiI GAWTC 9 cut(s) 203, 305, 1084, 1466, 2149, 2519, 2594, 2615, 2681
TscAI CASTG 6 cut(s) 883, 1339, 1560, 1660, 2314, 2445
TseFI GTSAC 3 cut(s) 910, 2330, 2840
Tsp45I GTSAC 3 cut(s) 910, 2330, 2840
TspGWI ACGGA 2 cut(s) 694, 2197
TspRI CASTG 6 cut(s) 883, 1339, 1560, 1660, 2314, 2445
Vha464I CTTAAG 2 cut(s) 1478, 1667
VpaK11BI GGWCC 4 cut(s) 171, 893, 1780, 2387
XapI RAATTY 5 cut(s) 503, 601, 931, 1583, 2430
XcmI CCANNNNNNNNNTGG 1 cut(s) 1796
XmaJI CCTAGG 1 cut(s) 662
XmnI GAANNNNTTC 4 cut(s) 580, 603, 942, 1677
XspI CTAG 7 cut(s) 477, 663, 924, 1509, 2042, 2085, 2619
Zsp2I ATGCAT 1 cut(s) 1567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.