U2 snRNP-associated SURP motif-containing
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G10800 AT5G25060 |
| fragaria_vesca | FvH4_2g41230 FvH4_2g41230 FvH4_2g41230 |
| malus_domestica | MD08G1054700.v1.1 MD15G1042300.v1.1 |
| prunus_persica | Prupe.1G395500_v2.0.a1 Prupe.1G395500_v2.0.a1 Prupe.1G395500_v2.0.a1 Prupe.1G395500_v2.0.a1 |
| pyrus_communis | pycom08g04510 pycom15g03940 |
| rosa_chinensis | RchiOBHm_Chr6g0299281 |
| rosa_laevigata | RLG00000011446 |
| rosa_roxburghii | Rroxscaffold_7G00168830 |
| rosa_rugosa | Rorug06G0286800 |
| rosa_samantha | Rh6AG398300 Rh6BG406700 Rh6CG412800 Rh6DG399500 |
| rosa_wichuraiana | Rw6G034860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 20, 1652 |
| Acc36I | ACCTGC | 3 cut(s) | 20, 658, 1652 |
| AccB1I | GGYRCC | 2 cut(s) | 692, 2523 |
| AccBSI | CCGCTC | 1 cut(s) | 2350 |
| AccII | CGCG | 2 cut(s) | 22, 1191 |
| AcoI | YGGCCR | 2 cut(s) | 272, 672 |
| AcsI | RAATTY | 5 cut(s) | 323, 421, 751, 1403, 2250 |
| AcuI | CTGAAG | 4 cut(s) | 230, 510, 1674, 2388 |
| AcyI | GRCGYC | 1 cut(s) | 505 |
| AfaI | GTAC | 1 cut(s) | 2420 |
| AfeI | AGCGCT | 1 cut(s) | 1369 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 48, 68, 662, 1744, 2106, 2270, 2584 |
| AflII | CTTAAG | 2 cut(s) | 1298, 1487 |
| AjnI | CCWGG | 1 cut(s) | 661 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 268, 300 |
| Ama87I | CYCGRG | 2 cut(s) | 2112, 2162 |
| Aor51HI | AGCGCT | 1 cut(s) | 1369 |
| ApaI | GGGCCC | 1 cut(s) | 2113 |
| ApoI | RAATTY | 5 cut(s) | 323, 421, 751, 1403, 2250 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1273, 1305 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 400, 423, 762, 1497 |
| AspA2I | CCTAGG | 1 cut(s) | 482 |
| AspLEI | GCGC | 3 cut(s) | 1191, 1193, 1370 |
| AsuC2I | CCSGG | 1 cut(s) | 2579 |
| AsuHPI | GGTGA | 9 cut(s) | 44, 377, 396, 724, 806, 1634, 1676, 2213, 2669 |
| AvaI | CYCGRG | 2 cut(s) | 2112, 2162 |
| AvaII | GGWCC | 4 cut(s) | 4, 713, 1600, 2207 |
| AvrII | CCTAGG | 1 cut(s) | 482 |
| BaeGI | GKGCMC | 1 cut(s) | 2113 |
| BalI | TGGCCA | 1 cut(s) | 674 |
| BamHI | GGATCC | 1 cut(s) | 1047 |
| BanI | GGYRCC | 2 cut(s) | 692, 2523 |
| BanII | GRGCYC | 2 cut(s) | 2113, 2644 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 1401, 1433, 2179, 2211, 2449, 2481 |
| BauI | CACGAG | 1 cut(s) | 215 |
| BbvCI | CCTCAGC | 1 cut(s) | 1479 |
| BceAI | ACGGC | 1 cut(s) | 2112 |
| BciT130I | CCWGG | 1 cut(s) | 663 |
| BclI | TGATCA | 1 cut(s) | 811 |
| BcnI | CCSGG | 1 cut(s) | 2579 |
| BfaI | CTAG | 8 cut(s) | 297, 483, 744, 1329, 1862, 1905, 1914, 2436 |
| BfmI | CTRYAG | 3 cut(s) | 624, 1113, 1765 |
| BfoI | RGCGCY | 1 cut(s) | 1371 |
| BfrI | CTTAAG | 2 cut(s) | 1298, 1487 |
| BfuAI | ACCTGC | 3 cut(s) | 20, 658, 1652 |
| BlnI | CCTAGG | 1 cut(s) | 482 |
| Bme1390I | CCNGG | 2 cut(s) | 663, 2579 |
| Bme18I | GGWCC | 4 cut(s) | 4, 713, 1600, 2207 |
| BmeT110I | CYCGRG | 2 cut(s) | 2112, 2162 |
| BmiI | GGNNCC | 6 cut(s) | 694, 1049, 1602, 2111, 2209, 2525 |
| BmrFI | CCNGG | 2 cut(s) | 663, 2579 |
| BmrI | ACTGGG | 1 cut(s) | 2205 |
| BmuI | ACTGGG | 1 cut(s) | 2205 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2157 |
| BpmI | CTGGAG | 2 cut(s) | 645, 1356 |
| Bpu10I | CCTNAGC | 3 cut(s) | 981, 1080, 1479 |
| BpuEI | CTTGAG | 1 cut(s) | 2363 |
| BpuMI | CCSGG | 1 cut(s) | 2579 |
| BsaBI | GATNNNNATC | 2 cut(s) | 366, 1449 |
| BsaHI | GRCGYC | 1 cut(s) | 505 |
| BsaI | GGTCTC | 4 cut(s) | 1298, 2165, 2568, 2598 |
| BsaJI | CCNNGG | 2 cut(s) | 482, 1743 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2408, 2438 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 48, 68, 662, 1744, 2106, 2270, 2584 |
| Bse1I | ACTGG | 7 cut(s) | 765, 1036, 1373, 1532, 2037, 2203, 2211 |
| Bse8I | GATNNNNATC | 2 cut(s) | 366, 1449 |
| BseBI | CCWGG | 1 cut(s) | 663 |
| BseDI | CCNNGG | 2 cut(s) | 482, 1743 |
| BseJI | GATNNNNATC | 2 cut(s) | 366, 1449 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 48, 68, 662, 1744, 2106, 2270, 2584 |
| BseMII | CTCAG | 3 cut(s) | 995, 1071, 1470 |
| BseNI | ACTGG | 7 cut(s) | 765, 1036, 1373, 1532, 2037, 2203, 2211 |
| BsePI | GCGCGC | 1 cut(s) | 1189 |
| BseRI | GAGGAG | 5 cut(s) | 158, 218, 1222, 2297, 2360 |
| BseSI | GKGCMC | 1 cut(s) | 2113 |
| BseYI | CCCAGC | 1 cut(s) | 1259 |
| BsgI | GTGCAG | 1 cut(s) | 636 |
| Bsh1236I | CGCG | 2 cut(s) | 22, 1191 |
| BshNI | GGYRCC | 2 cut(s) | 692, 2523 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2112, 2162 |
| BsiSI | CCGG | 2 cut(s) | 803, 2578 |
| BslFI | GGGAC | 5 cut(s) | 1586, 1968, 2193, 2594, 2690 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 48, 68, 662, 1744, 2106, 2270, 2584 |
| BsmBI | CGTCTC | 1 cut(s) | 2296 |
| BsmFI | GGGAC | 5 cut(s) | 1586, 1968, 2193, 2594, 2690 |
| Bso31I | GGTCTC | 4 cut(s) | 1298, 2165, 2568, 2598 |
| BsoBI | CYCGRG | 2 cut(s) | 2112, 2162 |
| Bsp120I | GGGCCC | 1 cut(s) | 2109 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2113, 2644 |
| Bsp19I | CCATGG | 1 cut(s) | 1743 |
| BspCNI | CTCAG | 3 cut(s) | 994, 1072, 1471 |
| BspFNI | CGCG | 2 cut(s) | 22, 1191 |
| BspHI | TCATGA | 1 cut(s) | 534 |
| BspLI | GGNNCC | 6 cut(s) | 694, 1049, 1602, 2111, 2209, 2525 |
| BspMAI | CTGCAG | 2 cut(s) | 1117, 1769 |
| BspMI | ACCTGC | 3 cut(s) | 20, 658, 1652 |
| BspT107I | GGYRCC | 2 cut(s) | 692, 2523 |
| BspTI | CTTAAG | 2 cut(s) | 1298, 1487 |
| BspTNI | GGTCTC | 4 cut(s) | 1298, 2165, 2568, 2598 |
| BsrBI | CCGCTC | 1 cut(s) | 2350 |
| BsrI | ACTGG | 7 cut(s) | 765, 1036, 1373, 1532, 2037, 2203, 2211 |
| BssECI | CCNNGG | 2 cut(s) | 482, 1743 |
| BssHII | GCGCGC | 1 cut(s) | 1189 |
| BssNI | GRCGYC | 1 cut(s) | 505 |
| BssSI | CACGAG | 1 cut(s) | 215 |
| BssT1I | CCWWGG | 2 cut(s) | 482, 1743 |
| Bst2BI | CACGAG | 1 cut(s) | 215 |
| Bst2UI | CCWGG | 1 cut(s) | 663 |
| Bst4CI | ACNGT | 4 cut(s) | 251, 700, 1959, 2129 |
| Bst6I | CTCTTC | 6 cut(s) | 131, 486, 1065, 1827, 2681, 2725 |
| BstACI | GRCGYC | 1 cut(s) | 505 |
| BstAFI | CTTAAG | 2 cut(s) | 1298, 1487 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1667 |
| BstC8I | GCNNGC | 4 cut(s) | 463, 1127, 1191, 1566 |
| BstDEI | CTNAG | 4 cut(s) | 981, 1080, 1479, 1823 |
| BstDSI | CCRYGG | 1 cut(s) | 1743 |
| BstFNI | CGCG | 2 cut(s) | 22, 1191 |
| BstH2I | RGCGCY | 1 cut(s) | 1371 |
| BstHHI | GCGC | 3 cut(s) | 1191, 1193, 1370 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 268, 650, 1003, 1256, 1667, 1697, 2243, 2535 |
| BstNI | CCWGG | 1 cut(s) | 663 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2157 |
| BstSCI | CCNGG | 2 cut(s) | 661, 2577 |
| BstSFI | CTRYAG | 3 cut(s) | 624, 1113, 1765 |
| BstSLI | GKGCMC | 1 cut(s) | 2113 |
| BstUI | CGCG | 2 cut(s) | 22, 1191 |
| BstX2I | RGATCY | 2 cut(s) | 1047, 1945 |
| BstYI | RGATCY | 2 cut(s) | 1047, 1945 |
| BtgI | CCRYGG | 1 cut(s) | 1743 |
| BtgZI | GCGATG | 1 cut(s) | 2381 |
| BtsI | GCAGTG | 2 cut(s) | 1473, 2258 |
| BtsIMutI | CAGTG | 6 cut(s) | 696, 1152, 1380, 1473, 2134, 2258 |
| BveI | ACCTGC | 3 cut(s) | 20, 658, 1652 |
| Cac8I | GCNNGC | 4 cut(s) | 463, 1127, 1191, 1566 |
| CciI | TCATGA | 1 cut(s) | 534 |
| CfoI | GCGC | 3 cut(s) | 1191, 1193, 1370 |
| CseI | GACGC | 2 cut(s) | 494, 1770 |
| Csp6I | GTAC | 1 cut(s) | 2419 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 87, 122 |
| CviAII | CATG | 7 cut(s) | 535, 824, 1085, 1336, 1744, 2645, 2714 |
| CviQI | GTAC | 1 cut(s) | 2419 |
| DdeI | CTNAG | 4 cut(s) | 981, 1080, 1479, 1823 |
| EaeI | YGGCCR | 2 cut(s) | 272, 672 |
| Eam1104I | CTCTTC | 6 cut(s) | 131, 486, 1065, 1827, 2681, 2725 |
| EarI | CTCTTC | 6 cut(s) | 131, 486, 1065, 1827, 2681, 2725 |
| EciI | GGCGGA | 1 cut(s) | 789 |
| Eco130I | CCWWGG | 2 cut(s) | 482, 1743 |
| Eco24I | GRGCYC | 2 cut(s) | 2113, 2644 |
| Eco31I | GGTCTC | 4 cut(s) | 1298, 2165, 2568, 2598 |
| Eco47I | GGWCC | 4 cut(s) | 4, 713, 1600, 2207 |
| Eco47III | AGCGCT | 1 cut(s) | 1369 |
| Eco57I | CTGAAG | 4 cut(s) | 230, 510, 1674, 2388 |
| Eco88I | CYCGRG | 2 cut(s) | 2112, 2162 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1483 |
| EcoRI | GAATTC | 2 cut(s) | 751, 2250 |
| EcoRII | CCWGG | 1 cut(s) | 661 |
| EcoT14I | CCWWGG | 2 cut(s) | 482, 1743 |
| EcoT22I | ATGCAT | 1 cut(s) | 1387 |
| EcoT38I | GRGCYC | 2 cut(s) | 2113, 2644 |
| ErhI | CCWWGG | 2 cut(s) | 482, 1743 |
| Esp3I | CGTCTC | 1 cut(s) | 2296 |
| FaeI | CATG | 7 cut(s) | 538, 827, 1088, 1339, 1747, 2648, 2717 |
| FaqI | GGGAC | 5 cut(s) | 1586, 1968, 2193, 2594, 2690 |
| FatI | CATG | 7 cut(s) | 534, 823, 1084, 1335, 1743, 2644, 2713 |
| FauI | CCCGC | 4 cut(s) | 1059, 1557, 2343, 2613 |
| FauNDI | CATATG | 1 cut(s) | 669 |
| FbaI | TGATCA | 1 cut(s) | 811 |
| FriOI | GRGCYC | 2 cut(s) | 2113, 2644 |
| FspBI | CTAG | 8 cut(s) | 297, 483, 744, 1329, 1862, 1905, 1914, 2436 |
| GlaI | GCGC | 3 cut(s) | 1190, 1192, 1369 |
| GsaI | CCCAGC | 1 cut(s) | 1263 |
| GsuI | CTGGAG | 2 cut(s) | 645, 1356 |
| HaeII | RGCGCY | 1 cut(s) | 1371 |
| HapII | CCGG | 2 cut(s) | 803, 2578 |
| HgaI | GACGC | 2 cut(s) | 494, 1770 |
| HhaI | GCGC | 3 cut(s) | 1191, 1193, 1370 |
| Hin1I | GRCGYC | 1 cut(s) | 505 |
| Hin1II | CATG | 7 cut(s) | 538, 827, 1088, 1339, 1747, 2648, 2717 |
| Hin6I | GCGC | 3 cut(s) | 1189, 1191, 1368 |
| HinP1I | GCGC | 3 cut(s) | 1189, 1191, 1368 |
| HpaII | CCGG | 2 cut(s) | 803, 2578 |
| HphI | GGTGA | 9 cut(s) | 44, 377, 396, 724, 806, 1634, 1676, 2213, 2669 |
| Hpy166II | GTNNAC | 2 cut(s) | 254, 2042 |
| Hpy8I | GTNNAC | 2 cut(s) | 254, 2042 |
| HpyCH4III | ACNGT | 4 cut(s) | 251, 700, 1959, 2129 |
| HpyCH4IV | ACGT | 1 cut(s) | 2305 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 268, 650, 1003, 1256, 1667, 1697, 2243, 2535 |
| HpyF3I | CTNAG | 4 cut(s) | 981, 1080, 1479, 1823 |
| HpySE526I | ACGT | 1 cut(s) | 2305 |
| Hsp92I | GRCGYC | 1 cut(s) | 505 |
| Hsp92II | CATG | 7 cut(s) | 538, 827, 1088, 1339, 1747, 2648, 2717 |
| HspAI | GCGC | 3 cut(s) | 1189, 1191, 1368 |
| Ksp22I | TGATCA | 1 cut(s) | 811 |
| LmnI | GCTCC | 5 cut(s) | 205, 1375, 1712, 2284, 2347 |
| MaeI | CTAG | 8 cut(s) | 297, 483, 744, 1329, 1862, 1905, 1914, 2436 |
| MaeII | ACGT | 1 cut(s) | 2305 |
| MaeIII | GTNAC | 5 cut(s) | 645, 730, 2150, 2553, 2657 |
| MbiI | CCGCTC | 1 cut(s) | 2350 |
| MflI | RGATCY | 2 cut(s) | 1047, 1945 |
| MhlI | GDGCHC | 2 cut(s) | 2113, 2644 |
| MlsI | TGGCCA | 1 cut(s) | 674 |
| MluNI | TGGCCA | 1 cut(s) | 674 |
| MlyI | GAGTC | 5 cut(s) | 1103, 1145, 1219, 1288, 1326 |
| MmeI | TCCRAC | 2 cut(s) | 373, 1088 |
| Mox20I | TGGCCA | 1 cut(s) | 674 |
| Mph1103I | ATGCAT | 1 cut(s) | 1387 |
| MroXI | GAANNNNTTC | 4 cut(s) | 400, 423, 762, 1497 |
| MscI | TGGCCA | 1 cut(s) | 674 |
| MseI | TTAA | 9 cut(s) | 1070, 1196, 1299, 1440, 1488, 2063, 2168, 2276, 2358 |
| MslI | CAYNNNNRTG | 1 cut(s) | 261 |
| Msp20I | TGGCCA | 1 cut(s) | 674 |
| MspA1I | CMGCKG | 2 cut(s) | 2532, 2620 |
| MspCI | CTTAAG | 2 cut(s) | 1298, 1487 |
| MspI | CCGG | 2 cut(s) | 803, 2578 |
| MspR9I | CCNGG | 2 cut(s) | 663, 2579 |
| MvaI | CCWGG | 1 cut(s) | 663 |
| MvnI | CGCG | 2 cut(s) | 22, 1191 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 268, 650, 1003, 1256, 1667, 1697, 2243, 2535 |
| NciI | CCSGG | 1 cut(s) | 2579 |
| NcoI | CCATGG | 1 cut(s) | 1743 |
| NdeI | CATATG | 1 cut(s) | 669 |
| NlaIII | CATG | 7 cut(s) | 538, 827, 1088, 1339, 1747, 2648, 2717 |
| NlaIV | GGNNCC | 6 cut(s) | 694, 1049, 1602, 2111, 2209, 2525 |
| NmuCI | GTSAC | 3 cut(s) | 730, 2150, 2657 |
| NsiI | ATGCAT | 1 cut(s) | 1387 |
| PagI | TCATGA | 1 cut(s) | 534 |
| PaqCI | CACCTGC | 2 cut(s) | 20, 1652 |
| PauI | GCGCGC | 1 cut(s) | 1189 |
| PdmI | GAANNNNTTC | 4 cut(s) | 400, 423, 762, 1497 |
| PfeI | GAWTC | 8 cut(s) | 125, 904, 1286, 1969, 2336, 2411, 2432, 2498 |
| PfoI | TCCNGGA | 1 cut(s) | 661 |
| PleI | GAGTC | 5 cut(s) | 1102, 1144, 1218, 1288, 1326 |
| PpsI | GAGTC | 5 cut(s) | 1102, 1144, 1218, 1288, 1326 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2157 |
| Psp6I | CCWGG | 1 cut(s) | 661 |
| PspFI | CCCAGC | 1 cut(s) | 1259 |
| PspGI | CCWGG | 1 cut(s) | 661 |
| PspN4I | GGNNCC | 6 cut(s) | 694, 1049, 1602, 2111, 2209, 2525 |
| PspOMI | GGGCCC | 1 cut(s) | 2109 |
| PstI | CTGCAG | 2 cut(s) | 1117, 1769 |
| PsuI | RGATCY | 2 cut(s) | 1047, 1945 |
| PteI | GCGCGC | 1 cut(s) | 1189 |
| RsaI | GTAC | 1 cut(s) | 2420 |
| RsaNI | GTAC | 1 cut(s) | 2419 |
| RseI | CAYNNNNRTG | 1 cut(s) | 261 |
| SaqAI | TTAA | 9 cut(s) | 1070, 1196, 1299, 1440, 1488, 2063, 2168, 2276, 2358 |
| SchI | GAGTC | 5 cut(s) | 1103, 1145, 1219, 1288, 1326 |
| ScrFI | CCNGG | 2 cut(s) | 663, 2579 |
| SduI | GDGCHC | 2 cut(s) | 2113, 2644 |
| SfcI | CTRYAG | 3 cut(s) | 624, 1113, 1765 |
| SinI | GGWCC | 4 cut(s) | 4, 713, 1600, 2207 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 261 |
| SmlI | CTYRAG | 3 cut(s) | 1298, 1487, 2342 |
| SmoI | CTYRAG | 3 cut(s) | 1298, 1487, 2342 |
| SspI | AATATT | 1 cut(s) | 1936 |
| SspMI | CTAG | 8 cut(s) | 297, 483, 744, 1329, 1862, 1905, 1914, 2436 |
| StyD4I | CCNGG | 2 cut(s) | 661, 2577 |
| StyI | CCWWGG | 2 cut(s) | 482, 1743 |
| TaaI | ACNGT | 4 cut(s) | 251, 700, 1959, 2129 |
| TaiI | ACGT | 1 cut(s) | 2308 |
| TaqI | TCGA | 3 cut(s) | 181, 1798, 1921 |
| TaqII | GACCGA | 2 cut(s) | 1569, 2622 |
| TauI | GCSGC | 2 cut(s) | 274, 2524 |
| TfiI | GAWTC | 8 cut(s) | 125, 904, 1286, 1969, 2336, 2411, 2432, 2498 |
| Tru1I | TTAA | 9 cut(s) | 1070, 1196, 1299, 1440, 1488, 2063, 2168, 2276, 2358 |
| Tru9I | TTAA | 9 cut(s) | 1070, 1196, 1299, 1440, 1488, 2063, 2168, 2276, 2358 |
| TscAI | CASTG | 6 cut(s) | 703, 1159, 1380, 1480, 2134, 2265 |
| TseFI | GTSAC | 3 cut(s) | 730, 2150, 2657 |
| Tsp45I | GTSAC | 3 cut(s) | 730, 2150, 2657 |
| TspGWI | ACGGA | 3 cut(s) | 514, 1938, 2017 |
| TspRI | CASTG | 6 cut(s) | 703, 1159, 1380, 1480, 2134, 2265 |
| Vha464I | CTTAAG | 2 cut(s) | 1298, 1487 |
| VpaK11BI | GGWCC | 4 cut(s) | 4, 713, 1600, 2207 |
| XapI | RAATTY | 5 cut(s) | 323, 421, 751, 1403, 2250 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1616 |
| XmaJI | CCTAGG | 1 cut(s) | 482 |
| XmnI | GAANNNNTTC | 4 cut(s) | 400, 423, 762, 1497 |
| XspI | CTAG | 8 cut(s) | 297, 483, 744, 1329, 1862, 1905, 1914, 2436 |
| Zsp2I | ATGCAT | 1 cut(s) | 1387 |