Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0011536

Physical Location & Seq

Genomic Coordinates Reverse (-)

2575125 .. 2581786

Gene Structure 6662 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g04500.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2220 bp

ATGGAGTTTAGGAGGTGCATTCAGGTCTTCCTTGTGTTGGTGCTGATTCAGAGCATGGAATCATCTTCTGTTGTTGCATTGACTGACCCATTAGACGTTGCTGCAATGAATAGCTTGTTTGTTAATCTAGGCTACCCACCTCTTCAAGGGTGGCTTCTTGTTGGAGGAGACCCATGTGGTGAGAACTGGCAAGGTGTTAGTTGTGTCTTCGCGAATGTAACAGCACTAAAGCTTAGTAGTGCCAACTTGGGAGGACAATTGGGTGATAGCTTGCAAACCTTCGGGTCAATAATAGAAATAGATCTGAGTAACAATCATATTGGAGGGAATATCCCAACACTTTTGCCTGTGACTGTCAGAAACGTTTCTCTATCAAATAATCAATTAACCGGAAGCATCCCAGGTGGTTTGGCAACATTGTCTCAGTTGATGGAACTGTCGTTAGATAATAACCATATCAGTGGAGATATACCAGATGTCTTTCAACTGCTTAGTAGTTTGACGAGATTGGATCTGTCCAGTAATAATTTAACTGGTCAACTAGGTCCGTCATTGAGGAATTTGTCATCTCTTACCACGTTGTATCTGCAGAACAATCGCCTAGCCGGAACCCTTGATGTTTTACAGGATCTTCCACTACAGGATCTGAATATTGAAAATAATTTGTTCTCTGGGCCAATACCTGCAAAGTTGCTGACTATTCCAGACTTCAGAAAAGAGGGAAATCCTTTCAACACAACTATTCTTCCATCACCTCCTGCACCAGCACCAGTAACTTCATTGATAGCTAGTGCACCCGCTTCTGGAGAGAATCCTGCTAATGGGCCCTCTTCACTACCAATATTTGTTTCTCATAAAACTGGAAAATCCTTGATAACTAAGCCACTCACTTGGATTGTAATTGGAGGGGTTTCATTAGTTCTGTTAGTGATTTTGTGTGGACTAGTGAGATGTTTCAAGGTAAGGAGTGACAACAGAGCAAAGAGGAATGACATTAGTGCGTATAAGCTTCCTACAGAGAATACCAAATACAGTCAATCTTCACTTGAGGAAGGTCTTCAAATGGAGAAAGTTCCAAAAGAGGCCATTTTGAAACCACTGGATGGATATGGAGCGGAGAGCATCAGAATGGGTATGATGGCAAAACCACAAAGAGATAAAAAGACTGATGTGAGAAGTACTGAAAGTTCAATGCAGAGGAAGGATCCTGAAATTGACATGACAGACACTGATGAAGTAGTTTTGCCGCCACCACCTCCCCCATTTTTCCTCGGCAGAAAGGATCCTGTAAATCCTTTTGGTCCTGCTACTACAAGCAGGCTGAAGAGTCCAAACCCTAGCTCTGTAAAAGTATTTACTATCGCATCACTTCAGCAGTATACCAATAGCTTTTCAGAAGATTATTTTGTTGGAGCAGGCATGCTTGGCAGTGTTTATAGGGCAAATCTTCCTGATCAAAAGCTTTTGGCAGTCAAGAAACTGGACAGTGAAACTTGCAGGCTGCAGAGTGATAAGGAATTTCTTGAACTAGTATCTAATATCTCTGAAATTAGACATGCTAATATTGTGGAACTAGTGGGTTACTGTGCGGAGCATGAGCAACGGCTACTTGTGTATAAGTACTGCAGAAATGGGACACTCCATGATGCACTGCATACTGATGATGAAACTCATAAGAAACTCTCATGGAGTGTGCGCATCCGTGTGGCACTTGGAGCAGCAAGAGCTCTTGAGTACTTGCATGAGGTTTGTCAACCACCAATGGTGCACCACAATTTTAAGTCTGCCAATCTTCTTCTTGATGAAAAACTTGAAGTACATGTCTCAGACTGTGGTTTGGCTCCTTTAATAACATCTCCCTCTTTGGCTGGACACCTTCTCACTGCCTATGGTTCTTCAGCCCCAGAATTTGAATCGGGGTGTTATACACGCCAAAGTGATGTCTATAGCTTTGGAGTTGTAATGTTAGAGCTCCTTACAGGACGCAAAGCCTATGACAGGTCACGGCCTCGTGGTGAGCAATATTTGGTCAGGTGGGCAGTTCCCAAGCTTCATGATATCGATGCATTGTCAAGGATGGTTGATCCCTTTCTAAATGGAGCGTATGCAATGAAGTCTTTGTCACGTTTGGCAGATATTATTTCCTCTTGCATACATCGAGAGCCAGAATTCCGACCACCTATATCTGAAATCGTCCAAGAACTCTTGCAAATTAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase_Tyr

Protein Analysis

740

Amino Acids

80.93

Weight (kDa)

5.97

Isoelectric Point (pI)

45.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	119 - 177	2.8e-09	Leucine rich repeat
Pkinase	PF00069	468 - 621	3.9e-21	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	470 - 617	2.8e-24	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011536)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g04500 FvH4_3g04500 FvH4_3g04500
malus_domestica	MD05G1322700.v1.1 MD10G1300600.v1.1
prunus_persica	Prupe.4G039900_v2.0.a1 Prupe.4G039900_v2.0.a1 Prupe.4G039900_v2.0.a1
pyrus_communis	pycom05g29700 pycom10g25350
rosa_chinensis	RchiOBHm_Chr5g0007431
rosa_laevigata	RLG00000031456
rosa_multiflora	Rmu_sc0003826.1_g000001
rosa_roxburghii	Rroxscaffold_1G00069040
rosa_rugosa	Rorug04G0426800
rosa_samantha	Rh5AG055200 Rh5BG052800 Rh5CG062600 Rh5DG051800
rosa_wichuraiana	Rw5G005490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1697
Acc36I	ACCTGC	1 cut(s)	691
AccB7I	CCANNNNNTGG	1 cut(s)	1103
AccBSI	CCGCTC	1 cut(s)	1115
AccI	GTMKAC	1 cut(s)	1379
AccII	CGCG	1 cut(s)	212
AciI	CCGC	4 cut(s)	798, 1115, 1247, 1589
AclI	AACGTT	1 cut(s)	363
AclWI	GGATC	8 cut(s)	519, 636, 651, 1199, 1212, 1277, 1290, 2078
AcsI	RAATTY	4 cut(s)	559, 1517, 1907, 2168
AcuI	CTGAAG	4 cut(s)	694, 1343, 1355, 1881
AfaI	GTAC	4 cut(s)	1180, 1622, 1736, 1818
AfiI	CCNNNNNNNGG	6 cut(s)	37, 146, 803, 821, 1103, 1998
AflIII	ACRYGT	1 cut(s)	1819
AhlI	ACTAGT	3 cut(s)	943, 1528, 1573
AjnI	CCWGG	1 cut(s)	400
AjuI	GAANNNNNNNTTGG	2 cut(s)	832, 864
Alw21I	GWGCWC	4 cut(s)	796, 1729, 1770, 1974
Alw26I	GTCTC	3 cut(s)	162, 426, 1828
Alw44I	GTGCAC	2 cut(s)	792, 1766
AlwI	GGATC	8 cut(s)	519, 636, 651, 1199, 1212, 1277, 1290, 2078
AlwNI	CAGNNNCTG	2 cut(s)	646, 1229
AoxI	GGCC	4 cut(s)	674, 824, 1083, 2006
ApaI	GGGCCC	1 cut(s)	828
ApaLI	GTGCAC	2 cut(s)	792, 1766
ApeKI	GCWGC	3 cut(s)	101, 1501, 1718
ApoI	RAATTY	4 cut(s)	559, 1517, 1907, 2168
Asp700I	GAANNNNTTC	2 cut(s)	364, 1056
AspLEI	GCGC	1 cut(s)	1698
AspS9I	GGNCC	5 cut(s)	545, 674, 824, 825, 1301
AsuHPI	GGTGA	4 cut(s)	191, 275, 744, 2027
AvaII	GGWCC	2 cut(s)	545, 1301
BaeGI	GKGCMC	3 cut(s)	796, 828, 1770
BamHI	GGATCC	2 cut(s)	1204, 1282
BanII	GRGCYC	3 cut(s)	828, 1729, 1974
BauI	CACGAG	1 cut(s)	2010
BbsI	GAAGAC	3 cut(s)	19, 199, 1049
Bbv12I	GWGCWC	4 cut(s)	796, 1729, 1770, 1974
BbvI	GCAGC	3 cut(s)	88, 1488, 1730
BccI	CCATC	5 cut(s)	424, 757, 1097, 1132, 2071
BceAI	ACGGC	2 cut(s)	1619, 2021
BcgI	CGANNNNNNTGC	2 cut(s)	578, 612
BciT130I	CCWGG	1 cut(s)	402
BclI	TGATCA	1 cut(s)	1453
BcoDI	GTCTC	3 cut(s)	162, 426, 1828
BcuI	ACTAGT	3 cut(s)	943, 1528, 1573
BfaI	CTAG	8 cut(s)	128, 542, 602, 789, 944, 1338, 1529, 1574
BfmI	CTRYAG	6 cut(s)	587, 638, 1014, 1502, 1624, 1945
BfuAI	ACCTGC	1 cut(s)	691
BglII	AGATCT	1 cut(s)	301
BisI	GCNGC	4 cut(s)	102, 1247, 1502, 1719
BlsI	GCNGC	4 cut(s)	103, 1248, 1503, 1720
BmcAI	AGTACT	3 cut(s)	1180, 1622, 1736
Bme1390I	CCNGG	1 cut(s)	402
Bme18I	GGWCC	2 cut(s)	545, 1301
BmgT120I	GGNCC	5 cut(s)	545, 674, 824, 825, 1301
BmiI	GGNNCC	5 cut(s)	610, 826, 1206, 1284, 1842
BmrFI	CCNGG	1 cut(s)	402
BmsI	GCATC	6 cut(s)	405, 1131, 1373, 1636, 1707, 2053
BpiI	GAAGAC	3 cut(s)	19, 199, 1049
BpmI	CTGGAG	1 cut(s)	825
BpuEI	CTTGAG	2 cut(s)	1067, 1751
Bsa29I	ATCGAT	1 cut(s)	2061
BsaI	GGTCTC	1 cut(s)	162
BsaJI	CCNNGG	2 cut(s)	400, 1270
BsaWI	WCCGGW	1 cut(s)	389
Bsc4I	CCNNNNNNNGG	6 cut(s)	37, 146, 803, 821, 1103, 1998
Bse1I	ACTGG	7 cut(s)	191, 519, 538, 770, 865, 1104, 1485
Bse3DI	GCAATG	2 cut(s)	111, 2115
BseBI	CCWGG	1 cut(s)	402
BseCI	ATCGAT	1 cut(s)	2061
BseDI	CCNNGG	2 cut(s)	400, 1270
BseGI	GGATG	4 cut(s)	396, 1108, 1698, 2082
BseLI	CCNNNNNNNGG	6 cut(s)	37, 146, 803, 821, 1103, 1998
BseMI	GCAATG	2 cut(s)	111, 2115
BseMII	CTCAG	3 cut(s)	296, 437, 1839
BseNI	ACTGG	7 cut(s)	191, 519, 538, 770, 865, 1104, 1485
BseRI	GAGGAG	1 cut(s)	180
BseSI	GKGCMC	3 cut(s)	796, 828, 1770
BseXI	GCAGC	3 cut(s)	88, 1488, 1730
BsgI	GTGCAG	1 cut(s)	744
Bsh1236I	CGCG	1 cut(s)	212
BshFI	GGCC	4 cut(s)	676, 826, 1085, 2008
BshVI	ATCGAT	1 cut(s)	2061
BsiHKAI	GWGCWC	4 cut(s)	796, 1729, 1770, 1974
BsiSI	CCGG	2 cut(s)	390, 606
BslFI	GGGAC	1 cut(s)	1648
BslI	CCNNNNNNNGG	6 cut(s)	37, 146, 803, 821, 1103, 1998
BsmAI	GTCTC	3 cut(s)	162, 426, 1828
BsmFI	GGGAC	1 cut(s)	1648
BsmI	GAATGC	1 cut(s)	18
BsnI	GGCC	4 cut(s)	676, 826, 1085, 2008
Bso31I	GGTCTC	1 cut(s)	162
Bsp120I	GGGCCC	1 cut(s)	824
Bsp1286I	GDGCHC	5 cut(s)	796, 828, 1729, 1770, 1974
Bsp143I	GATC	8 cut(s)	301, 511, 628, 643, 1204, 1282, 1453, 2083
Bsp68I	TCGCGA	1 cut(s)	212
BspACI	CCGC	4 cut(s)	798, 1115, 1247, 1589
BspANI	GGCC	4 cut(s)	676, 826, 1085, 2008
BspCNI	CTCAG	3 cut(s)	297, 436, 1838
BspDI	ATCGAT	1 cut(s)	2061
BspFNI	CGCG	1 cut(s)	212
BspHI	TCATGA	1 cut(s)	2053
BspLI	GGNNCC	5 cut(s)	610, 826, 1206, 1284, 1842
BspMAI	CTGCAG	3 cut(s)	591, 1506, 1628
BspMI	ACCTGC	1 cut(s)	691
BspPI	GGATC	8 cut(s)	519, 636, 651, 1199, 1212, 1277, 1290, 2078
BspTNI	GGTCTC	1 cut(s)	162
BsrBI	CCGCTC	1 cut(s)	1115
BsrDI	GCAATG	2 cut(s)	111, 2115
BsrI	ACTGG	7 cut(s)	191, 519, 538, 770, 865, 1104, 1485
BssECI	CCNNGG	2 cut(s)	400, 1270
BssMI	GATC	8 cut(s)	301, 511, 628, 643, 1204, 1282, 1453, 2083
BssNAI	GTATAC	1 cut(s)	1380
BssSI	CACGAG	1 cut(s)	2010
Bst1107I	GTATAC	1 cut(s)	1380
Bst2BI	CACGAG	1 cut(s)	2010
Bst2UI	CCWGG	1 cut(s)	402
Bst4CI	ACNGT	6 cut(s)	355, 438, 1034, 1487, 1586, 1832
Bst6I	CTCTTC	3 cut(s)	147, 835, 1319
BstC8I	GCNNGC	5 cut(s)	272, 1319, 1417, 1421, 1499
BstDEI	CTNAG	6 cut(s)	233, 305, 423, 491, 879, 1825
BstENI	CCTNNNNNAGG	2 cut(s)	144, 1996
BstF5I	GGATG	4 cut(s)	396, 1108, 1698, 2082
BstFNI	CGCG	1 cut(s)	212
BstHHI	GCGC	1 cut(s)	1698
BstKTI	GATC	8 cut(s)	304, 514, 631, 646, 1207, 1285, 1456, 2086
BstMAI	GTCTC	3 cut(s)	162, 426, 1828
BstMBI	GATC	8 cut(s)	301, 511, 628, 643, 1204, 1282, 1453, 2083
BstMWI	GCNNNNNNNGC	3 cut(s)	1425, 1715, 1724
BstNI	CCWGG	1 cut(s)	402
BstNSI	RCATGY	3 cut(s)	1423, 1559, 1823
BstSCI	CCNGG	1 cut(s)	400
BstSFI	CTRYAG	6 cut(s)	587, 638, 1014, 1502, 1624, 1945
BstSLI	GKGCMC	3 cut(s)	796, 828, 1770
BstUI	CGCG	1 cut(s)	212
BstV1I	GCAGC	3 cut(s)	88, 1488, 1730
BstV2I	GAAGAC	3 cut(s)	19, 199, 1049
BstX2I	RGATCY	6 cut(s)	301, 511, 628, 643, 1204, 1282
BstXI	CCANNNNNNTGG	2 cut(s)	461, 891
BstYI	RGATCY	6 cut(s)	301, 511, 628, 643, 1204, 1282
BstZ17I	GTATAC	1 cut(s)	1380
Bsu15I	ATCGAT	1 cut(s)	2061
BsuRI	GGCC	4 cut(s)	676, 826, 1085, 2008
BsuTUI	ATCGAT	1 cut(s)	2061
BtsCI	GGATG	4 cut(s)	396, 1108, 1698, 2082
BtsI	GCAGTG	3 cut(s)	1435, 1649, 1881
BtsIMutI	CAGTG	7 cut(s)	466, 1097, 1227, 1435, 1492, 1649, 1881
BtuMI	TCGCGA	1 cut(s)	212
BveI	ACCTGC	1 cut(s)	691
Cac8I	GCNNGC	5 cut(s)	272, 1319, 1417, 1421, 1499
CaiI	CAGNNNCTG	2 cut(s)	646, 1229
CciI	TCATGA	1 cut(s)	2053
CfoI	GCGC	1 cut(s)	1698
Cfr13I	GGNCC	5 cut(s)	545, 674, 824, 825, 1301
ClaI	ATCGAT	1 cut(s)	2061
CseI	GACGC	1 cut(s)	1992
Csp6I	GTAC	4 cut(s)	1179, 1621, 1735, 1817
CviQI	GTAC	4 cut(s)	1179, 1621, 1735, 1817
DdeI	CTNAG	6 cut(s)	233, 305, 423, 491, 879, 1825
DpnI	GATC	8 cut(s)	303, 513, 630, 645, 1206, 1284, 1455, 2085
DpnII	GATC	8 cut(s)	301, 511, 628, 643, 1204, 1282, 1453, 2083
Eam1104I	CTCTTC	3 cut(s)	147, 835, 1319
EarI	CTCTTC	3 cut(s)	147, 835, 1319
Ecl136II	GAGCTC	2 cut(s)	1727, 1972
Eco24I	GRGCYC	3 cut(s)	828, 1729, 1974
Eco31I	GGTCTC	1 cut(s)	162
Eco32I	GATATC	1 cut(s)	2059
Eco47I	GGWCC	2 cut(s)	545, 1301
Eco53kI	GAGCTC	2 cut(s)	1727, 1972
Eco57I	CTGAAG	4 cut(s)	694, 1343, 1355, 1881
EcoICRI	GAGCTC	2 cut(s)	1727, 1972
EcoNI	CCTNNNNNAGG	2 cut(s)	144, 1996
EcoO109I	RGGNCCY	1 cut(s)	825
EcoRI	GAATTC	1 cut(s)	2168
EcoRII	CCWGG	1 cut(s)	400
EcoRV	GATATC	1 cut(s)	2059
EcoT22I	ATGCAT	1 cut(s)	2068
EcoT38I	GRGCYC	3 cut(s)	828, 1729, 1974
FalI	AAGNNNNNCTT	2 cut(s)	138, 170
FaqI	GGGAC	1 cut(s)	1648
FauI	CCCGC	1 cut(s)	805
FbaI	TGATCA	1 cut(s)	1453
FblI	GTMKAC	1 cut(s)	1379
Fnu4HI	GCNGC	4 cut(s)	102, 1247, 1502, 1719
FokI	GGATG	4 cut(s)	383, 1115, 1685, 2089
FriOI	GRGCYC	3 cut(s)	828, 1729, 1974
Fsp4HI	GCNGC	4 cut(s)	102, 1247, 1502, 1719
FspAI	RTGCGCAY	1 cut(s)	1697
FspBI	CTAG	8 cut(s)	128, 542, 602, 789, 944, 1338, 1529, 1574
FspI	TGCGCA	1 cut(s)	1697
GlaI	GCGC	1 cut(s)	1697
GluI	GCNGC	4 cut(s)	102, 1247, 1502, 1719
GsuI	CTGGAG	1 cut(s)	825
HaeIII	GGCC	4 cut(s)	676, 826, 1085, 2008
HapII	CCGG	2 cut(s)	390, 606
HgaI	GACGC	1 cut(s)	1992
HhaI	GCGC	1 cut(s)	1698
Hin6I	GCGC	1 cut(s)	1696
HinP1I	GCGC	1 cut(s)	1696
HincII	GTYRAC	2 cut(s)	539, 1754
HindII	GTYRAC	2 cut(s)	539, 1754
HindIII	AAGCTT	4 cut(s)	230, 1007, 1460, 2048
HinfI	GANTC	5 cut(s)	46, 59, 811, 1327, 1913
HpaII	CCGG	2 cut(s)	390, 606
HphI	GGTGA	4 cut(s)	191, 275, 744, 2027
Hpy166II	GTNNAC	6 cut(s)	539, 794, 941, 1380, 1754, 1768
Hpy8I	GTNNAC	6 cut(s)	539, 794, 941, 1380, 1754, 1768
HpyAV	CCTTC	4 cut(s)	289, 1046, 1195, 1886
HpyCH4III	ACNGT	6 cut(s)	355, 438, 1034, 1487, 1586, 1832
HpyCH4IV	ACGT	4 cut(s)	96, 363, 578, 2125
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1425, 1715, 1724
HpyF3I	CTNAG	6 cut(s)	233, 305, 423, 491, 879, 1825
HpySE526I	ACGT	4 cut(s)	96, 363, 578, 2125
HspAI	GCGC	1 cut(s)	1696
Ksp22I	TGATCA	1 cut(s)	1453
Kzo9I	GATC	8 cut(s)	301, 511, 628, 643, 1204, 1282, 1453, 2083
LmnI	GCTCC	7 cut(s)	1112, 1412, 1591, 1715, 1846, 1977, 2099
Lsp1109I	GCAGC	3 cut(s)	88, 1488, 1730
LweI	GCATC	6 cut(s)	405, 1131, 1373, 1636, 1707, 2053
MaeI	CTAG	8 cut(s)	128, 542, 602, 789, 944, 1338, 1529, 1574
MaeII	ACGT	4 cut(s)	96, 363, 578, 2125
MaeIII	GTNAC	8 cut(s)	217, 308, 349, 772, 968, 1580, 2001, 2121
MalI	GATC	8 cut(s)	303, 513, 630, 645, 1206, 1284, 1455, 2085
MbiI	CCGCTC	1 cut(s)	1115
MboI	GATC	8 cut(s)	301, 511, 628, 643, 1204, 1282, 1453, 2083
MfeI	CAATTG	1 cut(s)	257
MflI	RGATCY	6 cut(s)	301, 511, 628, 643, 1204, 1282
MhlI	GDGCHC	5 cut(s)	796, 828, 1729, 1770, 1974
MlyI	GAGTC	1 cut(s)	1336
MmeI	TCCRAC	3 cut(s)	142, 1390, 2197
Mph1103I	ATGCAT	1 cut(s)	2068
MroXI	GAANNNNTTC	2 cut(s)	364, 1056
MseI	TTAA	5 cut(s)	123, 386, 530, 1779, 1847
MslI	CAYNNNNRTG	4 cut(s)	459, 1127, 1659, 1703
MspI	CCGG	2 cut(s)	390, 606
MspR9I	CCNGG	1 cut(s)	402
MunI	CAATTG	1 cut(s)	257
Mva1269I	GAATGC	1 cut(s)	18
MvaI	CCWGG	1 cut(s)	402
MvnI	CGCG	1 cut(s)	212
MwoI	GCNNNNNNNGC	3 cut(s)	1425, 1715, 1724
NdeII	GATC	8 cut(s)	301, 511, 628, 643, 1204, 1282, 1453, 2083
NlaIV	GGNNCC	5 cut(s)	610, 826, 1206, 1284, 1842
NmeAIII	GCCGAG	1 cut(s)	1251
NmuCI	GTSAC	4 cut(s)	349, 968, 2001, 2121
NruI	TCGCGA	1 cut(s)	212
NsbI	TGCGCA	1 cut(s)	1697
NsiI	ATGCAT	1 cut(s)	2068
NspI	RCATGY	3 cut(s)	1423, 1559, 1823
PaeI	GCATGC	1 cut(s)	1423
PagI	TCATGA	1 cut(s)	2053
PciI	ACATGT	1 cut(s)	1819
PctI	GAATGC	1 cut(s)	18
PdmI	GAANNNNTTC	2 cut(s)	364, 1056
PfeI	GAWTC	4 cut(s)	46, 59, 811, 1913
PflMI	CCANNNNNTGG	1 cut(s)	1103
PkrI	GCNGC	4 cut(s)	103, 1248, 1503, 1720
PleI	GAGTC	1 cut(s)	1335
PpsI	GAGTC	1 cut(s)	1335
PscI	ACATGT	1 cut(s)	1819
Psp124BI	GAGCTC	2 cut(s)	1729, 1974
Psp1406I	AACGTT	1 cut(s)	363
Psp6I	CCWGG	1 cut(s)	400
PspGI	CCWGG	1 cut(s)	400
PspN4I	GGNNCC	5 cut(s)	610, 826, 1206, 1284, 1842
PspOMI	GGGCCC	1 cut(s)	824
PspPI	GGNCC	5 cut(s)	545, 674, 824, 825, 1301
PsrI	GAACNNNNNNTAC	2 cut(s)	1171, 1203
PstI	CTGCAG	3 cut(s)	591, 1506, 1628
PstNI	CAGNNNCTG	2 cut(s)	646, 1229
PsuI	RGATCY	6 cut(s)	301, 511, 628, 643, 1204, 1282
RruI	TCGCGA	1 cut(s)	212
RsaI	GTAC	4 cut(s)	1180, 1622, 1736, 1818
RsaNI	GTAC	4 cut(s)	1179, 1621, 1735, 1817
RseI	CAYNNNNRTG	4 cut(s)	459, 1127, 1659, 1703
SacI	GAGCTC	2 cut(s)	1729, 1974
SaqAI	TTAA	5 cut(s)	123, 386, 530, 1779, 1847
SatI	GCNGC	4 cut(s)	102, 1247, 1502, 1719
Sau3AI	GATC	8 cut(s)	301, 511, 628, 643, 1204, 1282, 1453, 2083
Sau96I	GGNCC	5 cut(s)	545, 674, 824, 825, 1301
ScaI	AGTACT	3 cut(s)	1180, 1622, 1736
SchI	GAGTC	1 cut(s)	1336
ScrFI	CCNGG	1 cut(s)	402
SduI	GDGCHC	5 cut(s)	796, 828, 1729, 1770, 1974
SfaNI	GCATC	6 cut(s)	405, 1131, 1373, 1636, 1707, 2053
SfcI	CTRYAG	6 cut(s)	587, 638, 1014, 1502, 1624, 1945
SinI	GGWCC	2 cut(s)	545, 1301
SmiMI	CAYNNNNRTG	4 cut(s)	459, 1127, 1659, 1703
SmlI	CTYRAG	2 cut(s)	1046, 1730
SmoI	CTYRAG	2 cut(s)	1046, 1730
SpeI	ACTAGT	3 cut(s)	943, 1528, 1573
SphI	GCATGC	1 cut(s)	1423
SsiI	CCGC	4 cut(s)	798, 1115, 1247, 1589
SspI	AATATT	4 cut(s)	652, 843, 1564, 2024
SspMI	CTAG	8 cut(s)	128, 542, 602, 789, 944, 1338, 1529, 1574
SstI	GAGCTC	2 cut(s)	1729, 1974
StyD4I	CCNGG	1 cut(s)	400
TaaI	ACNGT	6 cut(s)	355, 438, 1034, 1487, 1586, 1832
TaiI	ACGT	4 cut(s)	99, 366, 581, 2128
TaqI	TCGA	2 cut(s)	2061, 2158
TatI	WGTACW	4 cut(s)	1178, 1620, 1734, 1816
TauI	GCSGC	1 cut(s)	1249
TfiI	GAWTC	4 cut(s)	46, 59, 811, 1913
Tru1I	TTAA	5 cut(s)	123, 386, 530, 1779, 1847
Tru9I	TTAA	5 cut(s)	123, 386, 530, 1779, 1847
TscAI	CASTG	7 cut(s)	466, 1104, 1234, 1435, 1492, 1656, 1888
TseFI	GTSAC	4 cut(s)	349, 968, 2001, 2121
TseI	GCWGC	3 cut(s)	101, 1501, 1718
Tsp45I	GTSAC	4 cut(s)	349, 968, 2001, 2121
TspDTI	ATGAA	8 cut(s)	122, 768, 903, 1248, 1680, 1818, 2042, 2126
TspGWI	ACGGA	2 cut(s)	537, 1691
TspRI	CASTG	7 cut(s)	466, 1104, 1234, 1435, 1492, 1656, 1888
Van91I	CCANNNNNTGG	1 cut(s)	1103
VneI	GTGCAC	2 cut(s)	792, 1766
VpaK11BI	GGWCC	2 cut(s)	545, 1301
XagI	CCTNNNNNAGG	2 cut(s)	144, 1996
XapI	RAATTY	4 cut(s)	559, 1517, 1907, 2168
XceI	RCATGY	3 cut(s)	1423, 1559, 1823
XmiI	GTMKAC	1 cut(s)	1379
XmnI	GAANNNNTTC	2 cut(s)	364, 1056
XspI	CTAG	8 cut(s)	128, 542, 602, 789, 944, 1338, 1529, 1574
ZrmI	AGTACT	3 cut(s)	1180, 1622, 1736
Zsp2I	ATGCAT	1 cut(s)	2068

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.