Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0011536

Physical Location & Seq

Genomic Coordinates Forward (+)

90060759 .. 90066745

Gene Structure 5987 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00069040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGGGGTTTAAGAGGTGGGGGATATGCATGCATGTCTTCTTTGTTGGGTTTGTGGTGATTCAGAGTATGGAGTCTTCTGTTGTTGCATTGACTGACCCAATAGATGTTGCTGCAGTGAATAGCTTATATGCTAATCTAGGCTATCCACCTCTTCAAGGGTGGCTTCTTGTTGGAGGAGACCCCTGTGGGGAGAACTGGCAAGGTGTTATTTGTGTCTTCGCAAATGTAACAGCACTAAAGCTTAGTAGTGCCAACTTGGGAGGACAACTGGGTGATAGCTTGCAGACCTTTGGGTCAATAATAGAAATAGATTTGAGCAATAATCACATTGGAGGGAATATTCCAATACTTTTGCCTCCGACTGTCAGAAACGTTTCTCTATCAAATAATCAGCTTACTGGAAGCATCCCAGGTGGTTTGGCATCATTATCTCAGTTGATGGAATTGTCGTTAGATAATAACCATATCAGTGGAGAAATACCAGATGCCTTTCAACTGCTTAGTAGTTTGACGAGATTGGATCTGTCCGGTAATAATTTAACGGGTCAACTAGGTCCGTCATTGGGGAATTTGTCATCTCTTACCACATTGTACCTGCAGAACAATCACCTGACTGGAACCCTTGATGTGTTACAGGATCTTCCTCTACAGGATCTGAATATTGAAAATAATCTATTCTCTGGGCCAATACCAGCAAAGTTGCTGACTATTCCAGATTTCAGAAAAGAGGGAAATCCTTTCAACACCACTATTCTTCCATCACCTCCATCACCAGCACCAGTAGCTTCATCGATAGCTAGTGCACCTTCTTCTGGAGCAGGAGTAGAGAATCCGGCTAATGGGCCCTCTCCACTACCAATACTTATTTCTCATAGAACGGGAAAATCCTTGATAACTCAGCCGCTCACTTGGGTTGCAATTGGAGGGGTTTCATTAGTTCTGTTATTGATTTTGTGTGGACTAGTCAGATGTTTCAAAGCAAGGAGTGACAACAAGAAAGCAAAGAGGCATGACATTAGTGCATATAAGCTTCCTACAGAGAATACCAAATACACTCAATCTTCACTTGAGGAAGGTCTTCAAATGGAGAAAGTTCCAAAAGAGGCCATTTTGAAACCACTGGATGGATATGGAGCGGAGAGCATCAGAATGGGTATGATGGCAAAACCGCAAAAACAGAAAAAGACTGATGTGAAAAGTACTGAAAGTTCAATGCATAGGAAAGATCATGGGATTAACATGACAGACACGGATGAAGAATTTTTGCCACCGCCACCTCCCCCATTTTTCCTCAGCAAGAAGGATACTGTAAATCCTGTTGGTCCTGCTACCACAAGCAGGCTGAAGAGTCCAAACCCAAGCTCTGTAACAGTCTTTACTATTGCATCACTTCAGCAGTATACCAATAGCTTTTCTGAAGAAAATTTTATTGGAGCAGGCATGCTTGGCAGTGTTTATAGGGCTAAGCTTCCTGATCAAAAGCTTTTAGCAGTCAAGAAACTGGACAGTACAGCTTGCAGCCAGCAGAGTGATGAGGAATTTCTTGAACTAGTGTCTATTATCTCTGAAATTAGACATGCTAATATTGTGGAACTAGTGGGCTACTGTGCGGAGCATGACCAACGGCTACTTGTGTATAAGTATTGCAGAAATGGGACTCTCCATGATGCACTGCATACTGATGATAATATTCACCAGAAACTCTCATGGACTGTGCGCATCCGTGTGGCACTTGGAGCAGCAAGAGCTCTTGAGTATTTGCATGCGGTCTGTCAACCACCAATTGTGCACCACAATTTCAAGTCTGCCAATCTTCTTCTTGATGAAAAGCTTGAAGTGCATGTCTCAGACTGTGGTTTGGCTCCTCTGATAACATCTCCCTCTTTGGCTGGACACCTCCTCACTGCCTATGGTTCTTCAGCCCCAGAATTTGATTCAGGATGTTATACTCACCAAAGTGATGTCTATAGCTTTGGAGTTGTAATGTTGGAGCTCCTTACAGGGCGAAAAGCCTATGACAGGTCAAGGCCTCGTGGTGAGCAATATTTGGTCAGGTGGGCAGTTCCTAAGCTTCATGACATTGATGCATTGTCAAGGATGGTGGATCCCTCTCTAAATGGAGCTTATACAATGAAGTCTTTGTCACGTTTGGCGGATATTATTTCCTCTTGCATACATCGAGAGCCAGAATTCCGACCACCTATATCTGAAATTGTCCAAGAACTCTTGCAAATGACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase_Tyr

Protein Analysis

746

Amino Acids

81.1

Weight (kDa)

6.1

Isoelectric Point (pI)

46.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	120 - 180	2.6e-10	Leucine rich repeat
Pkinase	PF00069	472 - 741	1.1e-35	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	475 - 742	1.9e-38	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011536)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g04500 FvH4_3g04500 FvH4_3g04500
malus_domestica	MD05G1322700.v1.1 MD10G1300600.v1.1
prunus_persica	Prupe.4G039900_v2.0.a1 Prupe.4G039900_v2.0.a1 Prupe.4G039900_v2.0.a1
pyrus_communis	pycom05g29700 pycom10g25350
rosa_chinensis	RchiOBHm_Chr5g0007431
rosa_laevigata	RLG00000031456
rosa_multiflora	Rmu_sc0003826.1_g000001
rosa_roxburghii	Rroxscaffold_1G00069040
rosa_rugosa	Rorug04G0426800
rosa_samantha	Rh5AG055200 Rh5BG052800 Rh5CG062600 Rh5DG051800
rosa_wichuraiana	Rw5G005490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	292
Acc16I	TGCGCA	1 cut(s)	1718
Acc36I	ACCTGC	1 cut(s)	603
AccB7I	CCANNNNNTGG	1 cut(s)	1124
AccBSI	CCGCTC	2 cut(s)	904, 1136
AccI	GTMKAC	1 cut(s)	1400
AciI	CCGC	7 cut(s)	902, 1136, 1169, 1271, 1610, 1766, 2153
AclI	AACGTT	1 cut(s)	372
AclWI	GGATC	5 cut(s)	528, 645, 660, 2099, 2112
AcsI	RAATTY	6 cut(s)	568, 1259, 1423, 1538, 1928, 2189
AcuI	CTGAAG	4 cut(s)	1364, 1376, 1437, 1902
AfaI	GTAC	3 cut(s)	593, 1201, 1510
AfiI	CCNNNNNNNGG	8 cut(s)	155, 187, 563, 812, 839, 1124, 1338, 2019
AhlI	ACTAGT	3 cut(s)	961, 1549, 1594
AjnI	CCWGG	1 cut(s)	409
AjuI	GAANNNNNNNTTGG	4 cut(s)	850, 882, 1413, 1445
AleI	CACNNNNGTG	1 cut(s)	1956
Alw21I	GWGCWC	4 cut(s)	805, 1750, 1791, 1995
Alw26I	GTCTC	2 cut(s)	171, 1849
Alw44I	GTGCAC	2 cut(s)	801, 1787
AlwI	GGATC	5 cut(s)	528, 645, 660, 2099, 2112
AlwNI	CAGNNNCTG	1 cut(s)	655
AoxI	GGCC	4 cut(s)	683, 842, 1104, 2027
ApaI	GGGCCC	1 cut(s)	846
ApaLI	GTGCAC	2 cut(s)	801, 1787
ApeKI	GCWGC	3 cut(s)	110, 1518, 1739
ApoI	RAATTY	6 cut(s)	568, 1259, 1423, 1538, 1928, 2189
Asp700I	GAANNNNTTC	2 cut(s)	373, 1077
AspLEI	GCGC	1 cut(s)	1719
AspS9I	GGNCC	5 cut(s)	554, 683, 842, 843, 1322
AsuHPI	GGTGA	8 cut(s)	67, 284, 599, 753, 762, 1685, 1943, 2048
AvaII	GGWCC	2 cut(s)	554, 1322
BaeGI	GKGCMC	3 cut(s)	805, 846, 1791
BamHI	GGATCC	1 cut(s)	2104
BanII	GRGCYC	3 cut(s)	846, 1750, 1995
BarI	GAAGNNNNNNTAC	2 cut(s)	58, 90
BauI	CACGAG	1 cut(s)	2031
BbsI	GAAGAC	4 cut(s)	28, 66, 208, 1070
Bbv12I	GWGCWC	4 cut(s)	805, 1750, 1791, 1995
BbvCI	CCTCAGC	1 cut(s)	1292
BbvI	GCAGC	3 cut(s)	97, 1530, 1751
BccI	CCATC	6 cut(s)	433, 766, 775, 1118, 1153, 2092
BceAI	ACGGC	1 cut(s)	1640
BciT130I	CCWGG	1 cut(s)	411
BciVI	GTATCC	1 cut(s)	1297
BclI	TGATCA	1 cut(s)	1474
BcoDI	GTCTC	2 cut(s)	171, 1849
BcuI	ACTAGT	3 cut(s)	961, 1549, 1594
BfaI	CTAG	6 cut(s)	137, 551, 798, 962, 1550, 1595
BfmI	CTRYAG	5 cut(s)	111, 596, 647, 1035, 1966
BfuAI	ACCTGC	1 cut(s)	603
BfuI	GTATCC	1 cut(s)	1297
BisI	GCNGC	4 cut(s)	111, 902, 1519, 1740
BlpI	GCTNAGC	1 cut(s)	1464
BlsI	GCNGC	4 cut(s)	112, 903, 1520, 1741
BmcAI	AGTACT	1 cut(s)	1201
Bme1390I	CCNGG	1 cut(s)	411
Bme18I	GGWCC	2 cut(s)	554, 1322
BmgT120I	GGNCC	5 cut(s)	554, 683, 842, 843, 1322
BmiI	GGNNCC	4 cut(s)	619, 844, 1863, 2106
BmrFI	CCNGG	1 cut(s)	411
BmrI	ACTGGG	1 cut(s)	278
BmsI	GCATC	8 cut(s)	414, 431, 475, 1152, 1394, 1657, 1728, 2074
BmuI	ACTGGG	1 cut(s)	278
BpiI	GAAGAC	4 cut(s)	28, 66, 208, 1070
BpmI	CTGGAG	1 cut(s)	834
Bpu10I	CCTNAGC	2 cut(s)	1292, 2067
Bpu1102I	GCTNAGC	1 cut(s)	1464
BpuEI	CTTGAG	2 cut(s)	1088, 1772
Bsa29I	ATCGAT	1 cut(s)	791
BsaI	GGTCTC	1 cut(s)	171
BsaJI	CCNNGG	1 cut(s)	409
BsaWI	WCCGGW	1 cut(s)	527
BsaXI	ACNNNNNCTCC	2 cut(s)	807, 837
Bsc4I	CCNNNNNNNGG	8 cut(s)	155, 187, 563, 812, 839, 1124, 1338, 2019
Bse1I	ACTGG	7 cut(s)	200, 273, 403, 619, 779, 1125, 1506
BseBI	CCWGG	1 cut(s)	411
BseCI	ATCGAT	1 cut(s)	791
BseDI	CCNNGG	1 cut(s)	409
BseGI	GGATG	6 cut(s)	405, 1129, 1258, 1719, 1946, 2103
BseLI	CCNNNNNNNGG	8 cut(s)	155, 187, 563, 812, 839, 1124, 1338, 2019
BseMII	CTCAG	4 cut(s)	446, 911, 1306, 1860
BseNI	ACTGG	7 cut(s)	200, 273, 403, 619, 779, 1125, 1506
BseRI	GAGGAG	3 cut(s)	189, 1854, 1889
BseSI	GKGCMC	3 cut(s)	805, 846, 1791
BseXI	GCAGC	3 cut(s)	97, 1530, 1751
BshFI	GGCC	4 cut(s)	685, 844, 1106, 2029
BshVI	ATCGAT	1 cut(s)	791
BsiHKAI	GWGCWC	4 cut(s)	805, 1750, 1791, 1995
BsiSI	CCGG	2 cut(s)	528, 833
BslFI	GGGAC	1 cut(s)	1669
BslI	CCNNNNNNNGG	8 cut(s)	155, 187, 563, 812, 839, 1124, 1338, 2019
BsmAI	GTCTC	2 cut(s)	171, 1849
BsmFI	GGGAC	1 cut(s)	1669
BsnI	GGCC	4 cut(s)	685, 844, 1106, 2029
Bso31I	GGTCTC	1 cut(s)	171
Bsp120I	GGGCCC	1 cut(s)	842
Bsp1286I	GDGCHC	5 cut(s)	805, 846, 1750, 1791, 1995
Bsp143I	GATC	6 cut(s)	520, 637, 652, 1225, 1474, 2104
Bsp1720I	GCTNAGC	1 cut(s)	1464
BspACI	CCGC	7 cut(s)	902, 1136, 1169, 1271, 1610, 1766, 2153
BspANI	GGCC	4 cut(s)	685, 844, 1106, 2029
BspCNI	CTCAG	4 cut(s)	445, 910, 1305, 1859
BspDI	ATCGAT	1 cut(s)	791
BspHI	TCATGA	1 cut(s)	2074
BspLI	GGNNCC	4 cut(s)	619, 844, 1863, 2106
BspMAI	CTGCAG	2 cut(s)	115, 600
BspMI	ACCTGC	1 cut(s)	603
BspPI	GGATC	5 cut(s)	528, 645, 660, 2099, 2112
BspTNI	GGTCTC	1 cut(s)	171
BsrBI	CCGCTC	2 cut(s)	904, 1136
BsrI	ACTGG	7 cut(s)	200, 273, 403, 619, 779, 1125, 1506
BssECI	CCNNGG	1 cut(s)	409
BssMI	GATC	6 cut(s)	520, 637, 652, 1225, 1474, 2104
BssNAI	GTATAC	1 cut(s)	1401
BssSI	CACGAG	1 cut(s)	2031
Bst1107I	GTATAC	1 cut(s)	1401
Bst2BI	CACGAG	1 cut(s)	2031
Bst2UI	CCWGG	1 cut(s)	411
Bst4CI	ACNGT	7 cut(s)	364, 1309, 1372, 1508, 1607, 1714, 1853
Bst6I	CTCTTC	2 cut(s)	156, 1340
BstC8I	GCNNGC	8 cut(s)	29, 281, 1340, 1438, 1442, 1516, 1523, 1764
BstDEI	CTNAG	9 cut(s)	242, 432, 500, 897, 1292, 1464, 1846, 2067, 2238
BstENI	CCTNNNNNAGG	2 cut(s)	153, 2017
BstF5I	GGATG	6 cut(s)	405, 1129, 1258, 1719, 1946, 2103
BstHHI	GCGC	1 cut(s)	1719
BstKTI	GATC	6 cut(s)	523, 640, 655, 1228, 1477, 2107
BstMAI	GTCTC	2 cut(s)	171, 1849
BstMBI	GATC	6 cut(s)	520, 637, 652, 1225, 1474, 2104
BstMWI	GCNNNNNNNGC	5 cut(s)	782, 1446, 1736, 1745, 1837
BstNI	CCWGG	1 cut(s)	411
BstNSI	RCATGY	6 cut(s)	31, 35, 1444, 1580, 1766, 1844
BstSCI	CCNGG	1 cut(s)	409
BstSFI	CTRYAG	5 cut(s)	111, 596, 647, 1035, 1966
BstSLI	GKGCMC	3 cut(s)	805, 846, 1791
BstV1I	GCAGC	3 cut(s)	97, 1530, 1751
BstV2I	GAAGAC	4 cut(s)	28, 66, 208, 1070
BstX2I	RGATCY	4 cut(s)	520, 637, 652, 2104
BstXI	CCANNNNNNTGG	1 cut(s)	470
BstYI	RGATCY	4 cut(s)	520, 637, 652, 2104
BstZ17I	GTATAC	1 cut(s)	1401
Bsu15I	ATCGAT	1 cut(s)	791
BsuI	GTATCC	1 cut(s)	1297
BsuRI	GGCC	4 cut(s)	685, 844, 1106, 2029
BsuTUI	ATCGAT	1 cut(s)	791
BtsCI	GGATG	6 cut(s)	405, 1129, 1258, 1719, 1946, 2103
BtsI	GCAGTG	4 cut(s)	120, 1456, 1670, 1902
BtsIMutI	CAGTG	6 cut(s)	120, 475, 1118, 1456, 1670, 1902
BveI	ACCTGC	1 cut(s)	603
Cac8I	GCNNGC	8 cut(s)	29, 281, 1340, 1438, 1442, 1516, 1523, 1764
CaiI	CAGNNNCTG	1 cut(s)	655
CciI	TCATGA	1 cut(s)	2074
CfoI	GCGC	1 cut(s)	1719
Cfr13I	GGNCC	5 cut(s)	554, 683, 842, 843, 1322
ClaI	ATCGAT	1 cut(s)	791
Csp6I	GTAC	3 cut(s)	592, 1200, 1509
CspCI	CAANNNNNGTGG	2 cut(s)	2082, 2117
CviQI	GTAC	3 cut(s)	592, 1200, 1509
DdeI	CTNAG	9 cut(s)	242, 432, 500, 897, 1292, 1464, 1846, 2067, 2238
DpnI	GATC	6 cut(s)	522, 639, 654, 1227, 1476, 2106
DpnII	GATC	6 cut(s)	520, 637, 652, 1225, 1474, 2104
DrdI	GACNNNNNNGTC	1 cut(s)	292
DseDI	GACNNNNNNGTC	1 cut(s)	292
Eam1104I	CTCTTC	2 cut(s)	156, 1340
EarI	CTCTTC	2 cut(s)	156, 1340
EciI	GGCGGA	1 cut(s)	2168
Ecl136II	GAGCTC	2 cut(s)	1748, 1993
Eco147I	AGGCCT	1 cut(s)	2029
Eco24I	GRGCYC	3 cut(s)	846, 1750, 1995
Eco31I	GGTCTC	1 cut(s)	171
Eco47I	GGWCC	2 cut(s)	554, 1322
Eco53kI	GAGCTC	2 cut(s)	1748, 1993
Eco57I	CTGAAG	4 cut(s)	1364, 1376, 1437, 1902
EcoICRI	GAGCTC	2 cut(s)	1748, 1993
EcoNI	CCTNNNNNAGG	2 cut(s)	153, 2017
EcoO109I	RGGNCCY	1 cut(s)	843
EcoRI	GAATTC	1 cut(s)	2189
EcoRII	CCWGG	1 cut(s)	409
EcoT22I	ATGCAT	4 cut(s)	29, 33, 1218, 2089
EcoT38I	GRGCYC	3 cut(s)	846, 1750, 1995
FalI	AAGNNNNNCTT	2 cut(s)	147, 179
FaqI	GGGAC	1 cut(s)	1669
FbaI	TGATCA	1 cut(s)	1474
FblI	GTMKAC	1 cut(s)	1400
Fnu4HI	GCNGC	4 cut(s)	111, 902, 1519, 1740
FokI	GGATG	6 cut(s)	392, 1136, 1265, 1706, 1953, 2110
FriOI	GRGCYC	3 cut(s)	846, 1750, 1995
Fsp4HI	GCNGC	4 cut(s)	111, 902, 1519, 1740
FspAI	RTGCGCAY	1 cut(s)	1718
FspBI	CTAG	6 cut(s)	137, 551, 798, 962, 1550, 1595
FspI	TGCGCA	1 cut(s)	1718
GlaI	GCGC	1 cut(s)	1718
GluI	GCNGC	4 cut(s)	111, 902, 1519, 1740
GsuI	CTGGAG	1 cut(s)	834
HaeIII	GGCC	4 cut(s)	685, 844, 1106, 2029
HapII	CCGG	2 cut(s)	528, 833
HhaI	GCGC	1 cut(s)	1719
Hin6I	GCGC	1 cut(s)	1717
HinP1I	GCGC	1 cut(s)	1717
HincII	GTYRAC	2 cut(s)	548, 1775
HindII	GTYRAC	2 cut(s)	548, 1775
HindIII	AAGCTT	6 cut(s)	239, 1028, 1466, 1481, 1829, 2069
HinfI	GANTC	6 cut(s)	58, 71, 829, 1348, 1657, 1934
HpaII	CCGG	2 cut(s)	528, 833
HphI	GGTGA	8 cut(s)	67, 284, 599, 753, 762, 1685, 1943, 2048
Hpy166II	GTNNAC	6 cut(s)	548, 803, 959, 1401, 1775, 1789
Hpy8I	GTNNAC	6 cut(s)	548, 803, 959, 1401, 1775, 1789
HpyAV	CCTTC	3 cut(s)	816, 1067, 1294
HpyCH4III	ACNGT	7 cut(s)	364, 1309, 1372, 1508, 1607, 1714, 1853
HpyCH4IV	ACGT	2 cut(s)	372, 2146
HpyF10VI	GCNNNNNNNGC	5 cut(s)	782, 1446, 1736, 1745, 1837
HpyF3I	CTNAG	9 cut(s)	242, 432, 500, 897, 1292, 1464, 1846, 2067, 2238
HpySE526I	ACGT	2 cut(s)	372, 2146
HspAI	GCGC	1 cut(s)	1717
Ksp22I	TGATCA	1 cut(s)	1474
Kzo9I	GATC	6 cut(s)	520, 637, 652, 1225, 1474, 2104
LmnI	GCTCC	9 cut(s)	815, 1133, 1433, 1612, 1736, 1867, 1990, 1998, 2120
Lsp1109I	GCAGC	3 cut(s)	97, 1530, 1751
LweI	GCATC	8 cut(s)	414, 431, 475, 1152, 1394, 1657, 1728, 2074
MaeI	CTAG	6 cut(s)	137, 551, 798, 962, 1550, 1595
MaeII	ACGT	2 cut(s)	372, 2146
MaeIII	GTNAC	5 cut(s)	226, 630, 986, 1366, 2142
MalI	GATC	6 cut(s)	522, 639, 654, 1227, 1476, 2106
MbiI	CCGCTC	2 cut(s)	904, 1136
MboI	GATC	6 cut(s)	520, 637, 652, 1225, 1474, 2104
MfeI	CAATTG	2 cut(s)	918, 1782
MflI	RGATCY	4 cut(s)	520, 637, 652, 2104
MhlI	GDGCHC	5 cut(s)	805, 846, 1750, 1791, 1995
MlyI	GAGTC	3 cut(s)	80, 1357, 1651
MmeI	TCCRAC	4 cut(s)	151, 383, 1968, 2218
Mph1103I	ATGCAT	4 cut(s)	29, 33, 1218, 2089
MroXI	GAANNNNTTC	2 cut(s)	373, 1077
MseI	TTAA	3 cut(s)	9, 539, 1236
MslI	CAYNNNNRTG	5 cut(s)	468, 1148, 1680, 1724, 1956
MspI	CCGG	2 cut(s)	528, 833
MspR9I	CCNGG	1 cut(s)	411
MunI	CAATTG	2 cut(s)	918, 1782
MvaI	CCWGG	1 cut(s)	411
MwoI	GCNNNNNNNGC	5 cut(s)	782, 1446, 1736, 1745, 1837
NdeII	GATC	6 cut(s)	520, 637, 652, 1225, 1474, 2104
NlaIV	GGNNCC	4 cut(s)	619, 844, 1863, 2106
NmuCI	GTSAC	2 cut(s)	986, 2142
NsbI	TGCGCA	1 cut(s)	1718
NsiI	ATGCAT	4 cut(s)	29, 33, 1218, 2089
NspI	RCATGY	6 cut(s)	31, 35, 1444, 1580, 1766, 1844
OliI	CACNNNNGTG	1 cut(s)	1956
PaeI	GCATGC	3 cut(s)	31, 1444, 1766
PagI	TCATGA	1 cut(s)	2074
PceI	AGGCCT	1 cut(s)	2029
PdmI	GAANNNNTTC	2 cut(s)	373, 1077
PfeI	GAWTC	3 cut(s)	58, 829, 1934
PflMI	CCANNNNNTGG	1 cut(s)	1124
PkrI	GCNGC	4 cut(s)	112, 903, 1520, 1741
PleI	GAGTC	3 cut(s)	79, 1356, 1651
PpsI	GAGTC	3 cut(s)	79, 1356, 1651
Psp124BI	GAGCTC	2 cut(s)	1750, 1995
Psp1406I	AACGTT	1 cut(s)	372
Psp6I	CCWGG	1 cut(s)	409
PspGI	CCWGG	1 cut(s)	409
PspN4I	GGNNCC	4 cut(s)	619, 844, 1863, 2106
PspOMI	GGGCCC	1 cut(s)	842
PspPI	GGNCC	5 cut(s)	554, 683, 842, 843, 1322
PsrI	GAACNNNNNNTAC	2 cut(s)	1192, 1224
PstI	CTGCAG	2 cut(s)	115, 600
PstNI	CAGNNNCTG	1 cut(s)	655
PsuI	RGATCY	4 cut(s)	520, 637, 652, 2104
RsaI	GTAC	3 cut(s)	593, 1201, 1510
RsaNI	GTAC	3 cut(s)	592, 1200, 1509
RseI	CAYNNNNRTG	5 cut(s)	468, 1148, 1680, 1724, 1956
SacI	GAGCTC	2 cut(s)	1750, 1995
SaqAI	TTAA	3 cut(s)	9, 539, 1236
SatI	GCNGC	4 cut(s)	111, 902, 1519, 1740
Sau3AI	GATC	6 cut(s)	520, 637, 652, 1225, 1474, 2104
Sau96I	GGNCC	5 cut(s)	554, 683, 842, 843, 1322
ScaI	AGTACT	1 cut(s)	1201
SchI	GAGTC	3 cut(s)	80, 1357, 1651
ScrFI	CCNGG	1 cut(s)	411
SduI	GDGCHC	5 cut(s)	805, 846, 1750, 1791, 1995
SfaNI	GCATC	8 cut(s)	414, 431, 475, 1152, 1394, 1657, 1728, 2074
SfcI	CTRYAG	5 cut(s)	111, 596, 647, 1035, 1966
SinI	GGWCC	2 cut(s)	554, 1322
SmiMI	CAYNNNNRTG	5 cut(s)	468, 1148, 1680, 1724, 1956
SmlI	CTYRAG	2 cut(s)	1067, 1751
SmoI	CTYRAG	2 cut(s)	1067, 1751
SpeI	ACTAGT	3 cut(s)	961, 1549, 1594
SphI	GCATGC	3 cut(s)	31, 1444, 1766
SseBI	AGGCCT	1 cut(s)	2029
SsiI	CCGC	7 cut(s)	902, 1136, 1169, 1271, 1610, 1766, 2153
SspI	AATATT	5 cut(s)	340, 661, 1585, 1690, 2045
SspMI	CTAG	6 cut(s)	137, 551, 798, 962, 1550, 1595
SstI	GAGCTC	2 cut(s)	1750, 1995
StuI	AGGCCT	1 cut(s)	2029
StyD4I	CCNGG	1 cut(s)	409
TaaI	ACNGT	7 cut(s)	364, 1309, 1372, 1508, 1607, 1714, 1853
TaiI	ACGT	2 cut(s)	375, 2149
TaqI	TCGA	2 cut(s)	791, 2179
TatI	WGTACW	2 cut(s)	1199, 1508
TauI	GCSGC	1 cut(s)	904
TfiI	GAWTC	3 cut(s)	58, 829, 1934
Tru1I	TTAA	3 cut(s)	9, 539, 1236
Tru9I	TTAA	3 cut(s)	9, 539, 1236
TscAI	CASTG	6 cut(s)	120, 475, 1125, 1456, 1677, 1909
TseFI	GTSAC	2 cut(s)	986, 2142
TseI	GCWGC	3 cut(s)	110, 1518, 1739
Tsp45I	GTSAC	2 cut(s)	986, 2142
TspDTI	ATGAA	6 cut(s)	777, 921, 1269, 1839, 2063, 2147
TspGWI	ACGGA	3 cut(s)	546, 1265, 1712
TspRI	CASTG	6 cut(s)	120, 475, 1125, 1456, 1677, 1909
Van91I	CCANNNNNTGG	1 cut(s)	1124
VneI	GTGCAC	2 cut(s)	801, 1787
VpaK11BI	GGWCC	2 cut(s)	554, 1322
XagI	CCTNNNNNAGG	2 cut(s)	153, 2017
XapI	RAATTY	6 cut(s)	568, 1259, 1423, 1538, 1928, 2189
XceI	RCATGY	6 cut(s)	31, 35, 1444, 1580, 1766, 1844
XmiI	GTMKAC	1 cut(s)	1400
XmnI	GAANNNNTTC	2 cut(s)	373, 1077
XspI	CTAG	6 cut(s)	137, 551, 798, 962, 1550, 1595
ZrmI	AGTACT	1 cut(s)	1201
Zsp2I	ATGCAT	4 cut(s)	29, 33, 1218, 2089

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.