Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0011536

Physical Location & Seq

Genomic Coordinates Forward (+)

30079491 .. 30084402

Gene Structure 4912 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g29700.16

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGGTCCGAGTGCGGTGGGAGGTCCGCATGCAGTTGTTGATTGCGTTGATGCTGATTGTCACTGTGCCAGCTTCGGTTGCACTGACTGACCCACAAGATGTTGTCGCCATGAATAATTTATTTGTAGCATTAGGCTACCCTCCTCTTCCGGGGTGGCTTCTTGTTGGAGGAGACCCGTGTGGGGATAACTGGCAAGGTGTTGCCTGCGTCTTCTCAAACATAACATCTCTAAAGCTCAATGAAGCCAACTTGGGAGGACAGCTGGGTGATAGCTTGGCACTCTTCGGATCCATCATAGAAATAGATTTTGGCAATAACCATATCGGAGGGAGTATTCCATCTTTTCCCCCGACTGTCAGGAACGTTTCACTATCCAATAATCAGTTCATTGGAAGCATCCCGGGGGGTTTGTCATCGTCAGCTCAGTTGTTGGAATTGTCGTTAGATAATAACCATCTCAGTGGAGAAATACCAGATGCCTTTCAACCGCTTACCATTTTGAATAGATTGGATCTGTCTGGCAATAATTTAAGTGGTCAACTGTGCCCCTCACTGATGAATTTGTCATCTCTTTCCACATTGCATTTACAGAACAATAGTCTGGTTGGAACCCTTGATGTGTTACAGGATCTTCCTCTGCAGGATCTGAACATTGAAAACAATTTATTCTCTGGACCAATACCTCCAAAGTTGCTTGGCATTCCCAATTTCAGAAAAGATGGAAATCCTTTCAATACTACTATTATCCCATCAGCTCTACCGCCAGCACCTTCATTCGTAGCCAGGGCACCTACTTCTTATGAACATCCTTGGCAACAGGCTAATGGACCTTCTTCGCCAGCAATGCTAAGTACTGCAAGAACTCGGAATTTTTTGACCACTAAGACAGTGACTTGGATTGCTGTTGGGGGGATTCTAGTAGTTATTGTACTAGTTTTGTGTCTTGTAGTGAGATGTTTCAAAGGGAGGAGACAGAGCAAGGAAGAAAAGAAGCATGAGATTAGTACATATAAGATCCCTAGAGTGAATAAGAAATACAGTGAATCGTCACTTCAGGAAGGTGTTCAAATGGAGAAAGTCCCAAAAGAAGCAGTTATGAAGCCACTGGATAACTATGGAGTGGACAGCAACAGAGTGCTTGTAATTCCAAAGCCACAAAAAGAAACAAAGATAGAGGCGAAAAGTTTTGCAGAAAGTTCGATGTATAAGAAGGATCATTCAATTGACATGAGAGACGATGATGAATTTTTGCCGCGACCACCCCCTCCCCCATTTTTCGTTGCCAACAAGTGTACCGCAAGTTCAGTTGGGCCTGCTAGAGTAACTACAAGCAGGCATCCCAAGAAGTCTCCAGACTTAAGCTCTGTACAATTGTTTACCGTTGGATCACTTCAGCAGTATACCAATAGCTTCTCTGAAGAAAATTTTATTGGAGCAGGCATGCTTGGCAGTGTTTATAGGGCTACGCTTCCTGACCAAAAGATTTTGGCGGTCAAGAAACTGGACAGTACAGCATGTACGCAGCAGAGCGATGAGGAATTTCTTGATTTAGTATCTAATATCTCTAAAGCAAAACATGCTAATATTGTGAAACTAGTGGGTTACTCTGCTGAGCATGGTCAACGACTACTTGTGTATGAGTATTGTACAAATTGGACTCTCCATGATGCACTGCATACTGATGATGAAATTCATCACAAGCTCACATGGCGGGTGCGCATCCGCGTTGCACTTGGAGCTGCAAGAGCTCTCGAGTGTTTGCATGAGGCCTGTCAACCACCTGTTGTGCACCATAATTTCAAGTCTGCCAATCTTCTCCTTGATGAAGAGCTTGAAGTACATGTCTCGGACTGCGGTTTAGCTCCCCTGATATTGTCTCCCTCAATGTCCGGGCACCTCCTCACTGCGTATGGTTCTGCTGCCCCGGAATTTGACTCAGGAAGTTATACTCACCAAAGTGATGTCTACAGCTTTGGGGTTGTAATGTTAGAGCTCCTTACAGGGAGGAAGGCCTATGACAGGTCACGGCCTCGTGGGGAGCAATATTTGGTTAGATGGGCAGTTCCAAAGCTTCATGACATTGATGCATTATCTAGGATGGTTGATCCCTCTCTAAATGGAGCATATACAATGAAGTCTGTATCCCGTTTTGCCGATATCATTTCCTCTTGCGTACAGAGGGAGCCAGAATTCGGGCCACGAATATCTGAAATTGTCCAGGAACTCCTACAAGTTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase_Tyr

Protein Analysis

747

Amino Acids

81.94

Weight (kDa)

6.3

Isoelectric Point (pI)

44.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011536)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g04500 FvH4_3g04500 FvH4_3g04500
malus_domestica	MD05G1322700.v1.1 MD10G1300600.v1.1
prunus_persica	Prupe.4G039900_v2.0.a1 Prupe.4G039900_v2.0.a1 Prupe.4G039900_v2.0.a1
pyrus_communis	pycom05g29700 pycom10g25350
rosa_chinensis	RchiOBHm_Chr5g0007431
rosa_laevigata	RLG00000031456
rosa_multiflora	Rmu_sc0003826.1_g000001
rosa_roxburghii	Rroxscaffold_1G00069040
rosa_rugosa	Rorug04G0426800
rosa_samantha	Rh5AG055200 Rh5BG052800 Rh5CG062600 Rh5DG051800
rosa_wichuraiana	Rw5G005490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1718
AccB1I	GGYRCC	2 cut(s)	787, 1893
AccI	GTMKAC	2 cut(s)	1400, 1965
AccII	CGCG	2 cut(s)	1255, 1725
AclI	AACGTT	1 cut(s)	363
AclWI	GGATC	9 cut(s)	282, 295, 519, 636, 651, 1009, 1221, 1393, 2099
AcsI	RAATTY	8 cut(s)	559, 868, 1244, 1423, 1538, 1689, 1928, 2189
AcuI	CTGAAG	3 cut(s)	1037, 1376, 1437
AfiI	CCNNNNNNNGG	4 cut(s)	149, 181, 2019, 2192
AflII	CTTAAG	1 cut(s)	1357
AflIII	ACRYGT	1 cut(s)	1840
AgsI	TTSAA	9 cut(s)	485, 502, 656, 733, 961, 1067, 1221, 1801, 1835
AhlI	ACTAGT	2 cut(s)	931, 1594
AjnI	CCWGG	2 cut(s)	782, 2217
AjuI	GAANNNNNNNTTGG	6 cut(s)	291, 323, 368, 400, 1413, 1445
AleI	CACNNNNGTG	1 cut(s)	1956
Alw21I	GWGCWC	3 cut(s)	1750, 1791, 1995
Alw26I	GTCTC	6 cut(s)	165, 964, 1227, 1353, 1849, 1881
Alw44I	GTGCAC	1 cut(s)	1787
AlwI	GGATC	9 cut(s)	282, 295, 519, 636, 651, 1009, 1221, 1393, 2099
AlwNI	CAGNNNCTG	1 cut(s)	646
Ama87I	CYCGRG	2 cut(s)	400, 1751
AoxI	GGCC	5 cut(s)	1310, 1767, 2010, 2027, 2195
ApaLI	GTGCAC	1 cut(s)	1787
ApeKI	GCWGC	3 cut(s)	1522, 1739, 1919
ApoI	RAATTY	8 cut(s)	559, 868, 1244, 1423, 1538, 1689, 1928, 2189
Asp700I	GAANNNNTTC	1 cut(s)	1062
AspLEI	GCGC	1 cut(s)	1719
AspS9I	GGNCC	6 cut(s)	4, 22, 674, 827, 1310, 2195
AsuC2I	CCSGG	5 cut(s)	150, 401, 402, 1891, 1925
AsuHPI	GGTGA	2 cut(s)	278, 1943
AvaI	CYCGRG	2 cut(s)	400, 1751
AvaII	GGWCC	4 cut(s)	4, 22, 674, 827
BaeGI	GKGCMC	4 cut(s)	548, 790, 1791, 1896
BaeI	ACNNNNGTAYC	2 cut(s)	1276, 1309
BamHI	GGATCC	1 cut(s)	287
BanI	GGYRCC	2 cut(s)	787, 1893
BanII	GRGCYC	2 cut(s)	1750, 1995
BauI	CACGAG	1 cut(s)	2031
BbsI	GAAGAC	1 cut(s)	202
Bbv12I	GWGCWC	3 cut(s)	1750, 1791, 1995
BbvI	GCAGC	3 cut(s)	1534, 1726, 1906
BccI	CCATC	7 cut(s)	299, 346, 462, 713, 757, 2049, 2092
BceAI	ACGGC	1 cut(s)	2042
BcgI	CGANNNNNNTGC	2 cut(s)	1179, 1213
BciT130I	CCWGG	2 cut(s)	784, 2219
BciVI	GTATCC	1 cut(s)	2152
BcnI	CCSGG	5 cut(s)	150, 401, 402, 1891, 1925
BcoDI	GTCTC	6 cut(s)	165, 964, 1227, 1353, 1849, 1881
BcuI	ACTAGT	2 cut(s)	931, 1594
BfaI	CTAG	6 cut(s)	917, 932, 1020, 1317, 1595, 2094
BfmI	CTRYAG	2 cut(s)	638, 1966
BfrI	CTTAAG	1 cut(s)	1357
BfuI	GTATCC	1 cut(s)	2152
BisI	GCNGC	4 cut(s)	1253, 1523, 1740, 1920
BlpI	GCTNAGC	1 cut(s)	1611
BlsI	GCNGC	4 cut(s)	1254, 1524, 1741, 1921
BmcAI	AGTACT	1 cut(s)	853
Bme1390I	CCNGG	7 cut(s)	150, 401, 402, 784, 1891, 1925, 2219
Bme18I	GGWCC	4 cut(s)	4, 22, 674, 827
BmeT110I	CYCGRG	2 cut(s)	400, 1751
BmgT120I	GGNCC	6 cut(s)	4, 22, 674, 827, 1310, 2195
BmiI	GGNNCC	5 cut(s)	289, 610, 789, 1895, 2184
BmrFI	CCNGG	7 cut(s)	150, 401, 402, 784, 1891, 1925, 2219
BmsI	GCATC	7 cut(s)	39, 405, 466, 1345, 1657, 1728, 2074
BpiI	GAAGAC	1 cut(s)	202
BpmI	CTGGAG	1 cut(s)	1335
Bpu1102I	GCTNAGC	1 cut(s)	1611
BpuMI	CCSGG	5 cut(s)	150, 401, 402, 1891, 1925
BsaBI	GATNNNNATC	1 cut(s)	723
BsaI	GGTCTC	1 cut(s)	165
BsaJI	CCNNGG	6 cut(s)	149, 400, 401, 783, 809, 1923
Bsc4I	CCNNNNNNNGG	4 cut(s)	149, 181, 2019, 2192
Bse1I	ACTGG	3 cut(s)	194, 1110, 1506
Bse3DI	GCAATG	2 cut(s)	578, 849
Bse8I	GATNNNNATC	1 cut(s)	723
BseBI	CCWGG	2 cut(s)	784, 2219
BseDI	CCNNGG	6 cut(s)	149, 400, 401, 783, 809, 1923
BseGI	GGATG	5 cut(s)	396, 805, 1336, 1719, 2103
BseJI	GATNNNNATC	1 cut(s)	723
BseLI	CCNNNNNNNGG	4 cut(s)	149, 181, 2019, 2192
BseMI	GCAATG	2 cut(s)	578, 849
BseMII	CTCAG	4 cut(s)	437, 472, 1602, 1950
BseNI	ACTGG	3 cut(s)	194, 1110, 1506
BseRI	GAGGAG	4 cut(s)	132, 183, 982, 1889
BseSI	GKGCMC	4 cut(s)	548, 790, 1791, 1896
BseXI	GCAGC	3 cut(s)	1534, 1726, 1906
BseYI	CCCAGC	1 cut(s)	262
Bsh1236I	CGCG	2 cut(s)	1255, 1725
BshFI	GGCC	5 cut(s)	1312, 1769, 2012, 2029, 2197
BshNI	GGYRCC	2 cut(s)	787, 1893
BsiHKAI	GWGCWC	3 cut(s)	1750, 1791, 1995
BsiHKCI	CYCGRG	2 cut(s)	400, 1751
BsiSI	CCGG	4 cut(s)	149, 401, 1890, 1925
BslFI	GGGAC	1 cut(s)	1064
BslI	CCNNNNNNNGG	4 cut(s)	149, 181, 2019, 2192
BsmAI	GTCTC	6 cut(s)	165, 964, 1227, 1353, 1849, 1881
BsmBI	CGTCTC	1 cut(s)	1227
BsmFI	GGGAC	1 cut(s)	1064
BsmI	GAATGC	1 cut(s)	699
BsnI	GGCC	5 cut(s)	1312, 1769, 2012, 2029, 2197
Bso31I	GGTCTC	1 cut(s)	165
BsoBI	CYCGRG	2 cut(s)	400, 1751
Bsp1286I	GDGCHC	6 cut(s)	548, 790, 1750, 1791, 1896, 1995
Bsp1407I	TGTACA	2 cut(s)	1366, 1646
Bsp143I	GATC	8 cut(s)	287, 511, 628, 643, 1014, 1213, 1385, 2104
Bsp1720I	GCTNAGC	1 cut(s)	1611
BspANI	GGCC	5 cut(s)	1312, 1769, 2012, 2029, 2197
BspCNI	CTCAG	4 cut(s)	436, 471, 1603, 1949
BspFNI	CGCG	2 cut(s)	1255, 1725
BspHI	TCATGA	1 cut(s)	2074
BspLI	GGNNCC	5 cut(s)	289, 610, 789, 1895, 2184
BspMAI	CTGCAG	1 cut(s)	642
BspPI	GGATC	9 cut(s)	282, 295, 519, 636, 651, 1009, 1221, 1393, 2099
BspQI	GCTCTTC	1 cut(s)	1821
BspT107I	GGYRCC	2 cut(s)	787, 1893
BspTI	CTTAAG	1 cut(s)	1357
BspTNI	GGTCTC	1 cut(s)	165
BsrDI	GCAATG	2 cut(s)	578, 849
BsrGI	TGTACA	2 cut(s)	1366, 1646
BsrI	ACTGG	3 cut(s)	194, 1110, 1506
BssECI	CCNNGG	6 cut(s)	149, 400, 401, 783, 809, 1923
BssMI	GATC	8 cut(s)	287, 511, 628, 643, 1014, 1213, 1385, 2104
BssNAI	GTATAC	1 cut(s)	1401
BssSI	CACGAG	1 cut(s)	2031
BssT1I	CCWWGG	1 cut(s)	809
Bst1107I	GTATAC	1 cut(s)	1401
Bst2BI	CACGAG	1 cut(s)	2031
Bst2UI	CCWGG	2 cut(s)	784, 2219
Bst4CI	ACNGT	7 cut(s)	64, 355, 543, 889, 1040, 1381, 1508
Bst6I	CTCTTC	3 cut(s)	150, 287, 1821
BstAFI	CTTAAG	1 cut(s)	1357
BstAPI	GCANNNNNTGC	1 cut(s)	1577
BstAUI	TGTACA	2 cut(s)	1366, 1646
BstC8I	GCNNGC	9 cut(s)	29, 69, 205, 765, 840, 1314, 1334, 1438, 1442
BstDEI	CTNAG	6 cut(s)	423, 458, 848, 882, 1611, 1936
BstENI	CCTNNNNNAGG	1 cut(s)	2017
BstF5I	GGATG	5 cut(s)	396, 805, 1336, 1719, 2103
BstFNI	CGCG	2 cut(s)	1255, 1725
BstHHI	GCGC	1 cut(s)	1719
BstKTI	GATC	8 cut(s)	290, 514, 631, 646, 1017, 1216, 1388, 2107
BstMAI	GTCTC	6 cut(s)	165, 964, 1227, 1353, 1849, 1881
BstMBI	GATC	8 cut(s)	287, 511, 628, 643, 1014, 1213, 1385, 2104
BstMWI	GCNNNNNNNGC	7 cut(s)	77, 844, 1446, 1577, 1708, 1736, 1745
BstNI	CCWGG	2 cut(s)	784, 2219
BstNSI	RCATGY	5 cut(s)	31, 1444, 1518, 1580, 1844
BstSCI	CCNGG	7 cut(s)	148, 399, 400, 782, 1889, 1923, 2217
BstSFI	CTRYAG	2 cut(s)	638, 1966
BstSLI	GKGCMC	4 cut(s)	548, 790, 1791, 1896
BstUI	CGCG	2 cut(s)	1255, 1725
BstV1I	GCAGC	3 cut(s)	1534, 1726, 1906
BstV2I	GAAGAC	1 cut(s)	202
BstX2I	RGATCY	5 cut(s)	287, 511, 628, 643, 1014
BstXI	CCANNNNNNTGG	1 cut(s)	461
BstYI	RGATCY	5 cut(s)	287, 511, 628, 643, 1014
BstZ17I	GTATAC	1 cut(s)	1401
BsuI	GTATCC	1 cut(s)	2152
BsuRI	GGCC	5 cut(s)	1312, 1769, 2012, 2029, 2197
BtgZI	GCGATG	1 cut(s)	1545
BtsCI	GGATG	5 cut(s)	396, 805, 1336, 1719, 2103
BtsI	GCAGTG	3 cut(s)	1456, 1670, 1902
Cac8I	GCNNGC	9 cut(s)	29, 69, 205, 765, 840, 1314, 1334, 1438, 1442
CaiI	CAGNNNCTG	1 cut(s)	646
CciI	TCATGA	1 cut(s)	2074
CfoI	GCGC	1 cut(s)	1719
Cfr13I	GGNCC	6 cut(s)	4, 22, 674, 827, 1310, 2195
Cfr9I	CCCGGG	1 cut(s)	400
CseI	GACGC	1 cut(s)	196
DdeI	CTNAG	6 cut(s)	423, 458, 848, 882, 1611, 1936
DpnI	GATC	8 cut(s)	289, 513, 630, 645, 1016, 1215, 1387, 2106
DpnII	GATC	8 cut(s)	287, 511, 628, 643, 1014, 1213, 1385, 2104
Eam1104I	CTCTTC	3 cut(s)	150, 287, 1821
EarI	CTCTTC	3 cut(s)	150, 287, 1821
Ecl136II	GAGCTC	2 cut(s)	1748, 1993
Eco130I	CCWWGG	1 cut(s)	809
Eco147I	AGGCCT	2 cut(s)	1769, 2012
Eco24I	GRGCYC	2 cut(s)	1750, 1995
Eco31I	GGTCTC	1 cut(s)	165
Eco32I	GATATC	1 cut(s)	2158
Eco47I	GGWCC	4 cut(s)	4, 22, 674, 827
Eco53kI	GAGCTC	2 cut(s)	1748, 1993
Eco57I	CTGAAG	3 cut(s)	1037, 1376, 1437
Eco88I	CYCGRG	2 cut(s)	400, 1751
EcoICRI	GAGCTC	2 cut(s)	1748, 1993
EcoNI	CCTNNNNNAGG	1 cut(s)	2017
EcoRI	GAATTC	1 cut(s)	2189
EcoRII	CCWGG	2 cut(s)	782, 2217
EcoRV	GATATC	1 cut(s)	2158
EcoT14I	CCWWGG	1 cut(s)	809
EcoT22I	ATGCAT	1 cut(s)	2089
EcoT38I	GRGCYC	2 cut(s)	1750, 1995
ErhI	CCWWGG	1 cut(s)	809
Esp3I	CGTCTC	1 cut(s)	1227
FaqI	GGGAC	1 cut(s)	1064
FauI	CCCGC	1 cut(s)	1704
FblI	GTMKAC	2 cut(s)	1400, 1965
Fnu4HI	GCNGC	4 cut(s)	1253, 1523, 1740, 1920
FokI	GGATG	5 cut(s)	383, 792, 1323, 1706, 2110
FriOI	GRGCYC	2 cut(s)	1750, 1995
Fsp4HI	GCNGC	4 cut(s)	1253, 1523, 1740, 1920
FspAI	RTGCGCAY	1 cut(s)	1718
FspBI	CTAG	6 cut(s)	917, 932, 1020, 1317, 1595, 2094
FspI	TGCGCA	1 cut(s)	1718
GlaI	GCGC	1 cut(s)	1718
GluI	GCNGC	4 cut(s)	1253, 1523, 1740, 1920
GsaI	CCCAGC	1 cut(s)	266
GsuI	CTGGAG	1 cut(s)	1335
HaeIII	GGCC	5 cut(s)	1312, 1769, 2012, 2029, 2197
HapII	CCGG	4 cut(s)	149, 401, 1890, 1925
HgaI	GACGC	1 cut(s)	196
HhaI	GCGC	1 cut(s)	1719
Hin6I	GCGC	1 cut(s)	1717
HinP1I	GCGC	1 cut(s)	1717
HincII	GTYRAC	3 cut(s)	539, 1622, 1775
HindII	GTYRAC	3 cut(s)	539, 1622, 1775
HindIII	AAGCTT	1 cut(s)	2069
HinfI	GANTC	4 cut(s)	913, 1043, 1657, 1934
HpaII	CCGG	4 cut(s)	149, 401, 1890, 1925
HphI	GGTGA	2 cut(s)	278, 1943
Hpy166II	GTNNAC	9 cut(s)	539, 1123, 1293, 1377, 1401, 1622, 1775, 1789, 1966
Hpy188I	TCNGA	9 cut(s)	8, 287, 326, 648, 713, 867, 1417, 1849, 2209
Hpy8I	GTNNAC	9 cut(s)	539, 1123, 1293, 1377, 1401, 1622, 1775, 1789, 1966
HpyAV	CCTTC	5 cut(s)	780, 840, 1052, 1204, 2002
HpyCH4III	ACNGT	7 cut(s)	64, 355, 543, 889, 1040, 1381, 1508
HpyCH4IV	ACGT	1 cut(s)	363
HpyF10VI	GCNNNNNNNGC	7 cut(s)	77, 844, 1446, 1577, 1708, 1736, 1745
HpyF3I	CTNAG	6 cut(s)	423, 458, 848, 882, 1611, 1936
HpySE526I	ACGT	1 cut(s)	363
HspAI	GCGC	1 cut(s)	1717
Kzo9I	GATC	8 cut(s)	287, 511, 628, 643, 1014, 1213, 1385, 2104
LguI	GCTCTTC	1 cut(s)	1821
LmnI	GCTCC	7 cut(s)	1433, 1736, 1867, 1998, 2038, 2120, 2182
Lsp1109I	GCAGC	3 cut(s)	1534, 1726, 1906
LweI	GCATC	7 cut(s)	39, 405, 466, 1345, 1657, 1728, 2074
MaeI	CTAG	6 cut(s)	917, 932, 1020, 1317, 1595, 2094
MaeII	ACGT	1 cut(s)	363
MaeIII	GTNAC	7 cut(s)	58, 621, 889, 1047, 1321, 1601, 2022
MalI	GATC	8 cut(s)	289, 513, 630, 645, 1016, 1215, 1387, 2106
MboI	GATC	8 cut(s)	287, 511, 628, 643, 1014, 1213, 1385, 2104
MboII	GAAGA	9 cut(s)	137, 202, 274, 623, 825, 995, 1430, 1805, 1838
MfeI	CAATTG	2 cut(s)	1221, 1370
MflI	RGATCY	5 cut(s)	287, 511, 628, 643, 1014
MhlI	GDGCHC	6 cut(s)	548, 790, 1750, 1791, 1896, 1995
MlyI	GAGTC	2 cut(s)	1651, 1928
MmeI	TCCRAC	4 cut(s)	145, 411, 586, 1363
Mph1103I	ATGCAT	1 cut(s)	2089
MroXI	GAANNNNTTC	1 cut(s)	1062
MseI	TTAA	3 cut(s)	530, 1358, 2239
MslI	CAYNNNNRTG	3 cut(s)	459, 1680, 1956
MspA1I	CMGCKG	1 cut(s)	262
MspCI	CTTAAG	1 cut(s)	1357
MspI	CCGG	4 cut(s)	149, 401, 1890, 1925
MspR9I	CCNGG	7 cut(s)	150, 401, 402, 784, 1891, 1925, 2219
MunI	CAATTG	2 cut(s)	1221, 1370
Mva1269I	GAATGC	1 cut(s)	699
MvaI	CCWGG	2 cut(s)	784, 2219
MvnI	CGCG	2 cut(s)	1255, 1725
MwoI	GCNNNNNNNGC	7 cut(s)	77, 844, 1446, 1577, 1708, 1736, 1745
NciI	CCSGG	5 cut(s)	150, 401, 402, 1891, 1925
NdeII	GATC	8 cut(s)	287, 511, 628, 643, 1014, 1213, 1385, 2104
NlaIV	GGNNCC	5 cut(s)	289, 610, 789, 1895, 2184
NmuCI	GTSAC	4 cut(s)	58, 889, 1047, 2022
NsbI	TGCGCA	1 cut(s)	1718
NsiI	ATGCAT	1 cut(s)	2089
NspI	RCATGY	5 cut(s)	31, 1444, 1518, 1580, 1844
OliI	CACNNNNGTG	1 cut(s)	1956
PaeI	GCATGC	2 cut(s)	31, 1444
PaeR7I	CTCGAG	1 cut(s)	1751
PagI	TCATGA	1 cut(s)	2074
PceI	AGGCCT	2 cut(s)	1769, 2012
PciI	ACATGT	1 cut(s)	1840
PciSI	GCTCTTC	1 cut(s)	1821
PctI	GAATGC	1 cut(s)	699
PdmI	GAANNNNTTC	1 cut(s)	1062
PfeI	GAWTC	2 cut(s)	913, 1043
PfoI	TCCNGGA	1 cut(s)	2217
PkrI	GCNGC	4 cut(s)	1254, 1524, 1741, 1921
PleI	GAGTC	2 cut(s)	1651, 1928
PpsI	GAGTC	2 cut(s)	1651, 1928
PscI	ACATGT	1 cut(s)	1840
Psp124BI	GAGCTC	2 cut(s)	1750, 1995
Psp1406I	AACGTT	1 cut(s)	363
Psp6I	CCWGG	2 cut(s)	782, 2217
PspFI	CCCAGC	1 cut(s)	262
PspGI	CCWGG	2 cut(s)	782, 2217
PspN4I	GGNNCC	5 cut(s)	289, 610, 789, 1895, 2184
PspPI	GGNCC	6 cut(s)	4, 22, 674, 827, 1310, 2195
PsrI	GAACNNNNNNTAC	2 cut(s)	1285, 1317
PstI	CTGCAG	1 cut(s)	642
PstNI	CAGNNNCTG	1 cut(s)	646
PsuI	RGATCY	5 cut(s)	287, 511, 628, 643, 1014
PvuII	CAGCTG	1 cut(s)	262
RseI	CAYNNNNRTG	3 cut(s)	459, 1680, 1956
SacI	GAGCTC	2 cut(s)	1750, 1995
SapI	GCTCTTC	1 cut(s)	1821
SaqAI	TTAA	3 cut(s)	530, 1358, 2239
SatI	GCNGC	4 cut(s)	1253, 1523, 1740, 1920
Sau3AI	GATC	8 cut(s)	287, 511, 628, 643, 1014, 1213, 1385, 2104
Sau96I	GGNCC	6 cut(s)	4, 22, 674, 827, 1310, 2195
ScaI	AGTACT	1 cut(s)	853
SchI	GAGTC	2 cut(s)	1651, 1928
ScrFI	CCNGG	7 cut(s)	150, 401, 402, 784, 1891, 1925, 2219
SduI	GDGCHC	6 cut(s)	548, 790, 1750, 1791, 1896, 1995
SfaNI	GCATC	7 cut(s)	39, 405, 466, 1345, 1657, 1728, 2074
SfcI	CTRYAG	2 cut(s)	638, 1966
Sfr274I	CTCGAG	1 cut(s)	1751
SinI	GGWCC	4 cut(s)	4, 22, 674, 827
SlaI	CTCGAG	1 cut(s)	1751
SmaI	CCCGGG	1 cut(s)	402
SmiMI	CAYNNNNRTG	3 cut(s)	459, 1680, 1956
SmlI	CTYRAG	2 cut(s)	1357, 1751
SmoI	CTYRAG	2 cut(s)	1357, 1751
SpeI	ACTAGT	2 cut(s)	931, 1594
SphI	GCATGC	2 cut(s)	31, 1444
SseBI	AGGCCT	2 cut(s)	1769, 2012
SspI	AATATT	2 cut(s)	1585, 2045
SspMI	CTAG	6 cut(s)	917, 932, 1020, 1317, 1595, 2094
SstI	GAGCTC	2 cut(s)	1750, 1995
StuI	AGGCCT	2 cut(s)	1769, 2012
StyD4I	CCNGG	7 cut(s)	148, 399, 400, 782, 1889, 1923, 2217
StyI	CCWWGG	1 cut(s)	809
TaaI	ACNGT	7 cut(s)	64, 355, 543, 889, 1040, 1381, 1508
TaiI	ACGT	1 cut(s)	366
TaqI	TCGA	2 cut(s)	1199, 1752
TatI	WGTACW	7 cut(s)	851, 928, 1004, 1366, 1508, 1646, 1837
TauI	GCSGC	1 cut(s)	1255
TfiI	GAWTC	2 cut(s)	913, 1043
Tru1I	TTAA	3 cut(s)	530, 1358, 2239
Tru9I	TTAA	3 cut(s)	530, 1358, 2239
TseFI	GTSAC	4 cut(s)	58, 889, 1047, 2022
TseI	GCWGC	3 cut(s)	1522, 1739, 1919
Tsp45I	GTSAC	4 cut(s)	58, 889, 1047, 2022
TspMI	CCCGGG	1 cut(s)	400
Vha464I	CTTAAG	1 cut(s)	1357
VneI	GTGCAC	1 cut(s)	1787
VpaK11BI	GGWCC	4 cut(s)	4, 22, 674, 827
XagI	CCTNNNNNAGG	1 cut(s)	2017
XapI	RAATTY	8 cut(s)	559, 868, 1244, 1423, 1538, 1689, 1928, 2189
XceI	RCATGY	5 cut(s)	31, 1444, 1518, 1580, 1844
XhoI	CTCGAG	1 cut(s)	1751
XmaI	CCCGGG	1 cut(s)	400
XmiI	GTMKAC	2 cut(s)	1400, 1965
XmnI	GAANNNNTTC	1 cut(s)	1062
XspI	CTAG	6 cut(s)	917, 932, 1020, 1317, 1595, 2094
ZrmI	AGTACT	1 cut(s)	853
Zsp2I	ATGCAT	1 cut(s)	2089

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.