Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0011536

Physical Location & Seq

Genomic Coordinates Reverse (-)

4418213 .. 4422405

Gene Structure 4193 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG051800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGGGTTTAGGAGGTGGGGGATATGCATGCATGTCTTCTTTGTTGGGTTTGTGGTGATTCAGAGTATGGAGTCTTCTGTTGTTGCATTGACTGACCCAATAGATGTTGCTGCAGTGAATAGCTTATATGTTAATCTAGGCTACCCACCTCTTCAAGGGTGGCTTCTTGTTGGAGGAGACCCCTGTGGGGAGAACTGGCAAGGTGTTATTTGTGTCTTCGCGAATGTAACAGCACTAAAGCTTAGTAGTGCCAACTTGGGAGGACAACTGGGTGATAGCTTGCAGACCTTTGGGTCAATAATAGAAATAGATTTGAGCAATAATCACATTGGAGGGAATATTCCAATACTTTTGCCTCCGACTGTCAGAAATGTTTCTCTATCAAATAATCAGCTTACTGGAAGCATCCCAGGTGGTTTGGCATCATTATCTCAGTTGATGGAATTGTCATTAGATAATAACCATATCAGTGGAGAAATACCAGATGCCTTTCAACTGCTTAATAGTTTGACGAGATTGGATCTGTCCGGTAATAATTTAACAGGTCAACTAGGTCCGTCATTGGGGAATTTGTCATCTCTTACCACATTGTACCTGCAGAACAATCACCTGACTGGAACCCTTGATGTGTTACAGGATCTTCCTCTACAGGATCTGAATATTGAAAATAATCTATTCTCTGGGCCAATACCAGCAAAGTTGATGACCATTCCAGATTTCAGAAAAGAGGGAAATCCTTTCAACACCACTATTCTTCCATCACCTCCAGCACCAGCACCAGTAGCTTCATTGATAGCTAGTGCACCTTCTTCTGGAGCAGGAGTAGAGAATCCGGCTAACGGGCCCTCTCCACTACCAATACTTATTTCTCATAGAACTGGAAAATCCTTGATAACTAAGCCGCTCACTTGGATTGCAATTGGAGGGGTTTCATTAGTTCTGTTATTGATTTTGTGTGGACTAGTGAGATGTTTCAAAGCAAAGAGTGACAACAAGAAAGCAAAGAGGCATGACATTTGTGCATATAAGCTTCCTACAGAGAATACCAAATACACTCAATCTTCACTTGAGGAAGGTCTTCAAATGGAGAAAGTTCCAGAAGAGGCCATTTTGAAACCACTGGATGGATATGGAGCGGAGAGCATCAGAATGGGTATGATGGCAAAACCACAAAAACAGAAAAAGACTGATGTGAAAAGTACTGAAAGTTCAATGCATAGGAAAGATCATGGGATTAACATGACAGACACGGATGAAGAATTTTTGCCGCCGCCACCTCCCCCATTTTTCCTCAGTAAGAAGGATACTGTAAATCCTGTTGGTCCTGCTACCACAAGCAGGCTGAAGAGTCCAAACCCAAGCTCTGTAAAAGTCTTTACTATTGCATCACTTCAGCAGTATACCAATAGCTTTTCTGCAGAAAATTTTATTGGAGCAGGCATGCTTGGCAGTGTTTATAGGGCTAAGCTTCCTGATCAAAAGCTTTTAGCAGTCAAGAAACTGGACAGTACAGCTTGCAGCCAGCAGAGTGATGAGGAATTTCTTGAACTAGTGTCTAATATCTCTGAAATTAGACATGCTAACATTGTGGAACTAGTGGGTTACTGCGCGGAGCACGACCAACGGCTACTTGTGTATAAGTATTGCAGAAATGGGACTCTCCATGATGCACTGCATACTGATGATGAAATTCACCAGAAACTCTCATGGACTGTGCGCATCCGTGTGGCACTTGGAGCAGCAAGAGCTCTTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase_Tyr

Protein Analysis

585

Amino Acids

63.26

Weight (kDa)

6.14

Isoelectric Point (pI)

45.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	120 - 180	2.2e-10	Leucine rich repeat
Pkinase	PF00069	473 - 566	3.7e-12	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	474 - 584	8.2e-15	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011536)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g04500 FvH4_3g04500 FvH4_3g04500
malus_domestica	MD05G1322700.v1.1 MD10G1300600.v1.1
prunus_persica	Prupe.4G039900_v2.0.a1 Prupe.4G039900_v2.0.a1 Prupe.4G039900_v2.0.a1
pyrus_communis	pycom05g29700 pycom10g25350
rosa_chinensis	RchiOBHm_Chr5g0007431
rosa_laevigata	RLG00000031456
rosa_multiflora	Rmu_sc0003826.1_g000001
rosa_roxburghii	Rroxscaffold_1G00069040
rosa_rugosa	Rorug04G0426800
rosa_samantha	Rh5AG055200 Rh5BG052800 Rh5CG062600 Rh5DG051800
rosa_wichuraiana	Rw5G005490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	292
Acc16I	TGCGCA	1 cut(s)	1718
Acc36I	ACCTGC	1 cut(s)	603
AccB7I	CCANNNNNTGG	1 cut(s)	1124
AccBSI	CCGCTC	2 cut(s)	904, 1136
AccI	GTMKAC	1 cut(s)	1400
AccII	CGCG	2 cut(s)	221, 1610
AciI	CCGC	5 cut(s)	902, 1136, 1268, 1271, 1610
AclWI	GGATC	3 cut(s)	528, 645, 660
AcsI	RAATTY	5 cut(s)	568, 1259, 1423, 1538, 1689
AcuI	CTGAAG	2 cut(s)	1364, 1376
AfaI	GTAC	3 cut(s)	593, 1201, 1510
AfiI	CCNNNNNNNGG	7 cut(s)	155, 187, 563, 812, 839, 1124, 1338
AgsI	TTSAA	9 cut(s)	155, 494, 665, 742, 976, 1082, 1114, 1212, 1547
AhlI	ACTAGT	3 cut(s)	961, 1549, 1594
AjnI	CCWGG	1 cut(s)	409
AjuI	GAANNNNNNNTTGG	4 cut(s)	850, 882, 1413, 1445
Alw21I	GWGCWC	3 cut(s)	805, 1617, 1750
Alw26I	GTCTC	1 cut(s)	171
Alw44I	GTGCAC	1 cut(s)	801
AlwI	GGATC	3 cut(s)	528, 645, 660
AlwNI	CAGNNNCTG	1 cut(s)	655
AoxI	GGCC	3 cut(s)	683, 842, 1104
ApaI	GGGCCC	1 cut(s)	846
ApaLI	GTGCAC	1 cut(s)	801
ApeKI	GCWGC	3 cut(s)	110, 1518, 1739
ApoI	RAATTY	5 cut(s)	568, 1259, 1423, 1538, 1689
Asp700I	GAANNNNTTC	2 cut(s)	373, 1077
AspLEI	GCGC	2 cut(s)	1610, 1719
AspS9I	GGNCC	5 cut(s)	554, 683, 842, 843, 1322
AsuHPI	GGTGA	5 cut(s)	67, 284, 599, 753, 1685
AvaII	GGWCC	2 cut(s)	554, 1322
BaeGI	GKGCMC	2 cut(s)	805, 846
BanII	GRGCYC	2 cut(s)	846, 1750
BarI	GAAGNNNNNNTAC	2 cut(s)	58, 90
BbsI	GAAGAC	4 cut(s)	28, 66, 208, 1070
Bbv12I	GWGCWC	3 cut(s)	805, 1617, 1750
BbvI	GCAGC	3 cut(s)	97, 1530, 1751
BccI	CCATC	4 cut(s)	433, 766, 1118, 1153
BceAI	ACGGC	1 cut(s)	1640
BciT130I	CCWGG	1 cut(s)	411
BciVI	GTATCC	1 cut(s)	1297
BclI	TGATCA	1 cut(s)	1474
BcoDI	GTCTC	1 cut(s)	171
BcuI	ACTAGT	3 cut(s)	961, 1549, 1594
BfaI	CTAG	6 cut(s)	137, 551, 798, 962, 1550, 1595
BfmI	CTRYAG	5 cut(s)	111, 596, 647, 1035, 1416
BfuAI	ACCTGC	1 cut(s)	603
BfuI	GTATCC	1 cut(s)	1297
BisI	GCNGC	6 cut(s)	111, 902, 1268, 1271, 1519, 1740
BlpI	GCTNAGC	1 cut(s)	1464
BlsI	GCNGC	6 cut(s)	112, 903, 1269, 1272, 1520, 1741
BmcAI	AGTACT	1 cut(s)	1201
Bme1390I	CCNGG	1 cut(s)	411
Bme18I	GGWCC	2 cut(s)	554, 1322
BmgT120I	GGNCC	5 cut(s)	554, 683, 842, 843, 1322
BmiI	GGNNCC	2 cut(s)	619, 844
BmrFI	CCNGG	1 cut(s)	411
BmrI	ACTGGG	1 cut(s)	278
BmsI	GCATC	7 cut(s)	414, 431, 475, 1152, 1394, 1657, 1728
BmuI	ACTGGG	1 cut(s)	278
BpiI	GAAGAC	4 cut(s)	28, 66, 208, 1070
BpmI	CTGGAG	2 cut(s)	750, 834
Bpu1102I	GCTNAGC	1 cut(s)	1464
BpuEI	CTTGAG	1 cut(s)	1088
BsaI	GGTCTC	1 cut(s)	171
BsaJI	CCNNGG	1 cut(s)	409
BsaWI	WCCGGW	1 cut(s)	527
BsaXI	ACNNNNNCTCC	2 cut(s)	807, 837
Bsc4I	CCNNNNNNNGG	7 cut(s)	155, 187, 563, 812, 839, 1124, 1338
Bse1I	ACTGG	8 cut(s)	200, 273, 403, 619, 779, 883, 1125, 1506
BseBI	CCWGG	1 cut(s)	411
BseDI	CCNNGG	1 cut(s)	409
BseGI	GGATG	4 cut(s)	405, 1129, 1258, 1719
BseLI	CCNNNNNNNGG	7 cut(s)	155, 187, 563, 812, 839, 1124, 1338
BseMII	CTCAG	2 cut(s)	446, 1306
BseNI	ACTGG	8 cut(s)	200, 273, 403, 619, 779, 883, 1125, 1506
BseRI	GAGGAG	1 cut(s)	189
BseSI	GKGCMC	2 cut(s)	805, 846
BseXI	GCAGC	3 cut(s)	97, 1530, 1751
Bsh1236I	CGCG	2 cut(s)	221, 1610
BshFI	GGCC	3 cut(s)	685, 844, 1106
BsiHKAI	GWGCWC	3 cut(s)	805, 1617, 1750
BsiSI	CCGG	2 cut(s)	528, 833
BslFI	GGGAC	1 cut(s)	1669
BslI	CCNNNNNNNGG	7 cut(s)	155, 187, 563, 812, 839, 1124, 1338
BsmAI	GTCTC	1 cut(s)	171
BsmFI	GGGAC	1 cut(s)	1669
BsnI	GGCC	3 cut(s)	685, 844, 1106
Bso31I	GGTCTC	1 cut(s)	171
Bsp120I	GGGCCC	1 cut(s)	842
Bsp1286I	GDGCHC	4 cut(s)	805, 846, 1617, 1750
Bsp143I	GATC	5 cut(s)	520, 637, 652, 1225, 1474
Bsp1720I	GCTNAGC	1 cut(s)	1464
Bsp68I	TCGCGA	1 cut(s)	221
BspACI	CCGC	5 cut(s)	902, 1136, 1268, 1271, 1610
BspANI	GGCC	3 cut(s)	685, 844, 1106
BspCNI	CTCAG	2 cut(s)	445, 1305
BspFNI	CGCG	2 cut(s)	221, 1610
BspLI	GGNNCC	2 cut(s)	619, 844
BspMAI	CTGCAG	3 cut(s)	115, 600, 1420
BspMI	ACCTGC	1 cut(s)	603
BspPI	GGATC	3 cut(s)	528, 645, 660
BspTNI	GGTCTC	1 cut(s)	171
BsrBI	CCGCTC	2 cut(s)	904, 1136
BsrI	ACTGG	8 cut(s)	200, 273, 403, 619, 779, 883, 1125, 1506
BssECI	CCNNGG	1 cut(s)	409
BssMI	GATC	5 cut(s)	520, 637, 652, 1225, 1474
BssNAI	GTATAC	1 cut(s)	1401
Bst1107I	GTATAC	1 cut(s)	1401
Bst2UI	CCWGG	1 cut(s)	411
Bst4CI	ACNGT	4 cut(s)	364, 1309, 1508, 1714
Bst6I	CTCTTC	3 cut(s)	156, 1095, 1340
BstC8I	GCNNGC	7 cut(s)	29, 281, 1340, 1438, 1442, 1516, 1523
BstDEI	CTNAG	5 cut(s)	242, 432, 897, 1292, 1464
BstENI	CCTNNNNNAGG	1 cut(s)	153
BstF5I	GGATG	4 cut(s)	405, 1129, 1258, 1719
BstFNI	CGCG	2 cut(s)	221, 1610
BstHHI	GCGC	2 cut(s)	1610, 1719
BstKTI	GATC	5 cut(s)	523, 640, 655, 1228, 1477
BstMAI	GTCTC	1 cut(s)	171
BstMBI	GATC	5 cut(s)	520, 637, 652, 1225, 1474
BstMWI	GCNNNNNNNGC	4 cut(s)	782, 1446, 1736, 1745
BstNI	CCWGG	1 cut(s)	411
BstNSI	RCATGY	4 cut(s)	31, 35, 1444, 1580
BstSCI	CCNGG	1 cut(s)	409
BstSFI	CTRYAG	5 cut(s)	111, 596, 647, 1035, 1416
BstSLI	GKGCMC	2 cut(s)	805, 846
BstUI	CGCG	2 cut(s)	221, 1610
BstV1I	GCAGC	3 cut(s)	97, 1530, 1751
BstV2I	GAAGAC	4 cut(s)	28, 66, 208, 1070
BstX2I	RGATCY	3 cut(s)	520, 637, 652
BstXI	CCANNNNNNTGG	1 cut(s)	470
BstYI	RGATCY	3 cut(s)	520, 637, 652
BstZ17I	GTATAC	1 cut(s)	1401
BsuI	GTATCC	1 cut(s)	1297
BsuRI	GGCC	3 cut(s)	685, 844, 1106
BtsCI	GGATG	4 cut(s)	405, 1129, 1258, 1719
BtsI	GCAGTG	3 cut(s)	120, 1456, 1670
BtsIMutI	CAGTG	5 cut(s)	120, 475, 1118, 1456, 1670
BtuMI	TCGCGA	1 cut(s)	221
BveI	ACCTGC	1 cut(s)	603
Cac8I	GCNNGC	7 cut(s)	29, 281, 1340, 1438, 1442, 1516, 1523
CaiI	CAGNNNCTG	1 cut(s)	655
CfoI	GCGC	2 cut(s)	1610, 1719
Cfr13I	GGNCC	5 cut(s)	554, 683, 842, 843, 1322
Csp6I	GTAC	3 cut(s)	592, 1200, 1509
CviAII	CATG	9 cut(s)	28, 32, 1010, 1229, 1240, 1441, 1577, 1664, 1707
CviQI	GTAC	3 cut(s)	592, 1200, 1509
DdeI	CTNAG	5 cut(s)	242, 432, 897, 1292, 1464
DpnI	GATC	5 cut(s)	522, 639, 654, 1227, 1476
DpnII	GATC	5 cut(s)	520, 637, 652, 1225, 1474
DrdI	GACNNNNNNGTC	1 cut(s)	292
DseDI	GACNNNNNNGTC	1 cut(s)	292
Eam1104I	CTCTTC	3 cut(s)	156, 1095, 1340
EarI	CTCTTC	3 cut(s)	156, 1095, 1340
Ecl136II	GAGCTC	1 cut(s)	1748
Eco24I	GRGCYC	2 cut(s)	846, 1750
Eco31I	GGTCTC	1 cut(s)	171
Eco47I	GGWCC	2 cut(s)	554, 1322
Eco53kI	GAGCTC	1 cut(s)	1748
Eco57I	CTGAAG	2 cut(s)	1364, 1376
EcoICRI	GAGCTC	1 cut(s)	1748
EcoNI	CCTNNNNNAGG	1 cut(s)	153
EcoO109I	RGGNCCY	1 cut(s)	843
EcoRII	CCWGG	1 cut(s)	409
EcoT22I	ATGCAT	3 cut(s)	29, 33, 1218
EcoT38I	GRGCYC	2 cut(s)	846, 1750
FaeI	CATG	9 cut(s)	31, 35, 1013, 1232, 1243, 1444, 1580, 1667, 1710
FalI	AAGNNNNNCTT	2 cut(s)	147, 179
FaqI	GGGAC	1 cut(s)	1669
FatI	CATG	9 cut(s)	27, 31, 1009, 1228, 1239, 1440, 1576, 1663, 1706
FbaI	TGATCA	1 cut(s)	1474
FblI	GTMKAC	1 cut(s)	1400
Fnu4HI	GCNGC	6 cut(s)	111, 902, 1268, 1271, 1519, 1740
FokI	GGATG	4 cut(s)	392, 1136, 1265, 1706
FriOI	GRGCYC	2 cut(s)	846, 1750
Fsp4HI	GCNGC	6 cut(s)	111, 902, 1268, 1271, 1519, 1740
FspAI	RTGCGCAY	1 cut(s)	1718
FspBI	CTAG	6 cut(s)	137, 551, 798, 962, 1550, 1595
FspI	TGCGCA	1 cut(s)	1718
GlaI	GCGC	2 cut(s)	1609, 1718
GluI	GCNGC	6 cut(s)	111, 902, 1268, 1271, 1519, 1740
GsuI	CTGGAG	2 cut(s)	750, 834
HaeIII	GGCC	3 cut(s)	685, 844, 1106
HapII	CCGG	2 cut(s)	528, 833
HhaI	GCGC	2 cut(s)	1610, 1719
Hin1II	CATG	9 cut(s)	31, 35, 1013, 1232, 1243, 1444, 1580, 1667, 1710
Hin6I	GCGC	2 cut(s)	1608, 1717
HinP1I	GCGC	2 cut(s)	1608, 1717
HincII	GTYRAC	1 cut(s)	548
HindII	GTYRAC	1 cut(s)	548
HindIII	AAGCTT	4 cut(s)	239, 1028, 1466, 1481
HinfI	GANTC	5 cut(s)	58, 71, 829, 1348, 1657
HpaII	CCGG	2 cut(s)	528, 833
HphI	GGTGA	5 cut(s)	67, 284, 599, 753, 1685
Hpy166II	GTNNAC	4 cut(s)	548, 803, 959, 1401
Hpy188I	TCNGA	7 cut(s)	63, 360, 368, 657, 722, 1148, 1567
Hpy188III	TCNNGA	8 cut(s)	220, 713, 813, 1097, 1472, 1495, 1544, 1751
Hpy8I	GTNNAC	4 cut(s)	548, 803, 959, 1401
HpyAV	CCTTC	3 cut(s)	816, 1067, 1294
HpyCH4III	ACNGT	4 cut(s)	364, 1309, 1508, 1714
HpyF10VI	GCNNNNNNNGC	4 cut(s)	782, 1446, 1736, 1745
HpyF3I	CTNAG	5 cut(s)	242, 432, 897, 1292, 1464
Hsp92II	CATG	9 cut(s)	31, 35, 1013, 1232, 1243, 1444, 1580, 1667, 1710
HspAI	GCGC	2 cut(s)	1608, 1717
Ksp22I	TGATCA	1 cut(s)	1474
Kzo9I	GATC	5 cut(s)	520, 637, 652, 1225, 1474
LmnI	GCTCC	5 cut(s)	815, 1133, 1433, 1612, 1736
Lsp1109I	GCAGC	3 cut(s)	97, 1530, 1751
LweI	GCATC	7 cut(s)	414, 431, 475, 1152, 1394, 1657, 1728
MaeI	CTAG	6 cut(s)	137, 551, 798, 962, 1550, 1595
MaeIII	GTNAC	4 cut(s)	226, 630, 986, 1601
MalI	GATC	5 cut(s)	522, 639, 654, 1227, 1476
MbiI	CCGCTC	2 cut(s)	904, 1136
MboI	GATC	5 cut(s)	520, 637, 652, 1225, 1474
MfeI	CAATTG	1 cut(s)	918
MflI	RGATCY	3 cut(s)	520, 637, 652
MhlI	GDGCHC	4 cut(s)	805, 846, 1617, 1750
MluCI	AATT	9 cut(s)	443, 535, 568, 918, 1259, 1423, 1538, 1569, 1689
MlyI	GAGTC	3 cut(s)	80, 1357, 1651
MmeI	TCCRAC	2 cut(s)	151, 383
Mph1103I	ATGCAT	3 cut(s)	29, 33, 1218
MroXI	GAANNNNTTC	2 cut(s)	373, 1077
MseI	TTAA	4 cut(s)	132, 501, 539, 1236
MslI	CAYNNNNRTG	4 cut(s)	468, 1148, 1680, 1724
MspI	CCGG	2 cut(s)	528, 833
MspR9I	CCNGG	1 cut(s)	411
MunI	CAATTG	1 cut(s)	918
MvaI	CCWGG	1 cut(s)	411
MvnI	CGCG	2 cut(s)	221, 1610
MwoI	GCNNNNNNNGC	4 cut(s)	782, 1446, 1736, 1745
NdeII	GATC	5 cut(s)	520, 637, 652, 1225, 1474
NlaIII	CATG	9 cut(s)	31, 35, 1013, 1232, 1243, 1444, 1580, 1667, 1710
NlaIV	GGNNCC	2 cut(s)	619, 844
NmuCI	GTSAC	1 cut(s)	986
NruI	TCGCGA	1 cut(s)	221
NsbI	TGCGCA	1 cut(s)	1718
NsiI	ATGCAT	3 cut(s)	29, 33, 1218
NspI	RCATGY	4 cut(s)	31, 35, 1444, 1580
PaeI	GCATGC	2 cut(s)	31, 1444
PdmI	GAANNNNTTC	2 cut(s)	373, 1077
PfeI	GAWTC	2 cut(s)	58, 829
PflMI	CCANNNNNTGG	1 cut(s)	1124
PkrI	GCNGC	6 cut(s)	112, 903, 1269, 1272, 1520, 1741
PleI	GAGTC	3 cut(s)	79, 1356, 1651
PpsI	GAGTC	3 cut(s)	79, 1356, 1651
Psp124BI	GAGCTC	1 cut(s)	1750
Psp6I	CCWGG	1 cut(s)	409
PspGI	CCWGG	1 cut(s)	409
PspN4I	GGNNCC	2 cut(s)	619, 844
PspOMI	GGGCCC	1 cut(s)	842
PspPI	GGNCC	5 cut(s)	554, 683, 842, 843, 1322
PsrI	GAACNNNNNNTAC	2 cut(s)	1192, 1224
PstI	CTGCAG	3 cut(s)	115, 600, 1420
PstNI	CAGNNNCTG	1 cut(s)	655
PsuI	RGATCY	3 cut(s)	520, 637, 652
RruI	TCGCGA	1 cut(s)	221
RsaI	GTAC	3 cut(s)	593, 1201, 1510
RsaNI	GTAC	3 cut(s)	592, 1200, 1509
RseI	CAYNNNNRTG	4 cut(s)	468, 1148, 1680, 1724
SacI	GAGCTC	1 cut(s)	1750
SaqAI	TTAA	4 cut(s)	132, 501, 539, 1236
SatI	GCNGC	6 cut(s)	111, 902, 1268, 1271, 1519, 1740
Sau3AI	GATC	5 cut(s)	520, 637, 652, 1225, 1474
Sau96I	GGNCC	5 cut(s)	554, 683, 842, 843, 1322
ScaI	AGTACT	1 cut(s)	1201
SchI	GAGTC	3 cut(s)	80, 1357, 1651
ScrFI	CCNGG	1 cut(s)	411
SduI	GDGCHC	4 cut(s)	805, 846, 1617, 1750
SfaNI	GCATC	7 cut(s)	414, 431, 475, 1152, 1394, 1657, 1728
SfcI	CTRYAG	5 cut(s)	111, 596, 647, 1035, 1416
SinI	GGWCC	2 cut(s)	554, 1322
SmiMI	CAYNNNNRTG	4 cut(s)	468, 1148, 1680, 1724
SmlI	CTYRAG	2 cut(s)	1067, 1751
SmoI	CTYRAG	2 cut(s)	1067, 1751
SpeI	ACTAGT	3 cut(s)	961, 1549, 1594
SphI	GCATGC	2 cut(s)	31, 1444
Sse9I	AATT	9 cut(s)	443, 535, 568, 918, 1259, 1423, 1538, 1569, 1689
SsiI	CCGC	5 cut(s)	902, 1136, 1268, 1271, 1610
SspI	AATATT	2 cut(s)	340, 661
SspMI	CTAG	6 cut(s)	137, 551, 798, 962, 1550, 1595
SstI	GAGCTC	1 cut(s)	1750
StyD4I	CCNGG	1 cut(s)	409
TaaI	ACNGT	4 cut(s)	364, 1309, 1508, 1714
TasI	AATT	9 cut(s)	443, 535, 568, 918, 1259, 1423, 1538, 1569, 1689
TatI	WGTACW	2 cut(s)	1199, 1508
TauI	GCSGC	3 cut(s)	904, 1270, 1273
TfiI	GAWTC	2 cut(s)	58, 829
Tru1I	TTAA	4 cut(s)	132, 501, 539, 1236
Tru9I	TTAA	4 cut(s)	132, 501, 539, 1236
TscAI	CASTG	5 cut(s)	120, 475, 1125, 1456, 1677
TseFI	GTSAC	1 cut(s)	986
TseI	GCWGC	3 cut(s)	110, 1518, 1739
Tsp45I	GTSAC	1 cut(s)	986
TspDTI	ATGAA	4 cut(s)	777, 921, 1269, 1701
TspGWI	ACGGA	3 cut(s)	546, 1265, 1712
TspRI	CASTG	5 cut(s)	120, 475, 1125, 1456, 1677
Van91I	CCANNNNNTGG	1 cut(s)	1124
VneI	GTGCAC	1 cut(s)	801
VpaK11BI	GGWCC	2 cut(s)	554, 1322
XagI	CCTNNNNNAGG	1 cut(s)	153
XapI	RAATTY	5 cut(s)	568, 1259, 1423, 1538, 1689
XceI	RCATGY	4 cut(s)	31, 35, 1444, 1580
XmiI	GTMKAC	1 cut(s)	1400
XmnI	GAANNNNTTC	2 cut(s)	373, 1077
XspI	CTAG	6 cut(s)	137, 551, 798, 962, 1550, 1595
ZrmI	AGTACT	1 cut(s)	1201
Zsp2I	ATGCAT	3 cut(s)	29, 33, 1218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.