Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0011536

Physical Location & Seq

Genomic Coordinates Reverse (-)

1874733 .. 1881204

Gene Structure 6472 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G039900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGGGTTGTGTGAGGTGGGAGGTACACATGCAGTTCTTCATTGGGTTGATGCTGATTCTCATTGTGCCATTTTCTGTTGCATTGACTGACCCAATTGATGTTGCGGCAATAAATGGCTTATACGTTGCTCTAGGCTATCCTCCTCTTCAAGGGTGGCTTCTTGTTGGAGGAGACCCATGTGGTGATCACTGGCAAGGGGTTGAATGCGTCTTCTCAAACGTAACAGGACTAAAGCTTAATGGAGCTAAACTGGGAGGACAGCTGGGTGATAGCTTGGGACTCTTCGGGTCAGTTATAGAAATAGATTTGAGCAACAACCATATTGGAGGGAGTATTCCATCACCTTTGCCCCCGACTGTCAGGAACGTTTCTCTATCAAATAATCTGTTCACTGGAAGCATCCCAGGTGGTTTGTCATCTTTAGCTCAGTTGTTGCAACTGTCATTAGACAATAACCATCTCAGCGGCGAAATGCCAGATGCCTTTCAACTGCTTACTGGTTTGAACAGATTGGATCTGTCTGGTAATAATTTAAGTGGTCAACTGTGCCCCTCATTGGGTAATTTGTCATCTCTTTCTACATTGAACTTGCAGAACAATCGCCTGGTTGGAACCCTTAATGTGTTACAGGATCTTCCCCTACAGGATCTGAACATTGAAAACAATTTATTCTCAGGGCCAATACCTGCAAAGTTGCTTAGTATTCCAAATTTCAGAAAAGATGGAAATCCTTTCAATACTACCATTATTCCATCACCTCCGGCACCAGCACCTTCGTTCTTAGCCAGGGCACCTTCTTCTTATGAACAACCTTGGAAACAGGCTAATGGACCTTCTTCGCCAGTAACACTAAATTCTGCTACACCTAGGAAATTTTTGACAGCTAAGACGGTCACTGGGATTGCTGTTGGAGGAATTTTAGTACTTATTGTATTCATTTTGTGTCTTCTAGTGAGATGTTTCAAAGGAAGGAGAGAAAAGAAGAAAGCAAAGCAGCATGAGCTTAATACATATAAGATCCCTAGAGAGAGTACTAAACACAGTGAATCATCACTTCCGGAAGGTGTTCCAATGGAGAAAGTCCCAAAAGAGGCAGTTATGAAACCACTGGATGGATATGGAGTGGACAGCAACAGAATGGTTGTAATTCCAAAGCCGCAAAAGGAAAACAAGATAGATGTGCAAAGTATTGCTGAAAGTTCAATGCATAAGAAGGATCATGTGGTTGACATGACAGACATGGATGCAGAATTTTTGCCACCACCCCCTCCCCCGTTTTTCCTTGCTAAGGGTACCACAAATCCTGTTGGGCCTACTAGAGTAACTACAAGCAGGTGTCCCATGAAGAGTCCAAACCCAAGCTCTGTAAAAGTTTTTACTGTTGCATCACTTCAGCAGTATACCAATAGCTTCTCTGAAGAAAATTTTATTGGAGCAGGCATGCTTGGCAGTGTTTACAGGGCTAAGCTTCCTGATCAAAAGGTTTTGGCAGTCAAGAAACTGGACAATACAGCTTGTAGGCAGCAGAGTGATGAGGAATTTATTGATCTAGTGTATAATATCTGTACAACTAGGCATGCTAATATTGTCGAACTAGTGGGTTACTGTGCTGAGCATGGTCAATGGCTACTTGTGTACGAGTATTGCAGAAATGGGACTCTCCATGATGCACTGCATACTGATGATGAAATCCATCAGAAACTTTCATGGAGTGTGCGCATCCGCATTGCACTTGGAGCTGCAAGAGCTCTTGAGTATTTGCACGAGGTCTGTCAGCCACCCATTGTGCACCATAATTTCAAGTCTGCCAATCTCCTCCTCGATGAAAAACTTGAAGTACACGTCTCAGACTGTGGTTTAGCTCCTCTGATAATGTCTCCCTCTATGTCTGGGCACCTCCTCACTGCTTATGGTTCTGCTGCCCCAGAGTTTGATTCCGGAAGTTATACTCATCAAAGTGATGTCTACAGCTTTGGAGTTGTAATGCTAGAGCTCCTTACAGGGCGGAAGTCCTATGACAGGTCGCGGCCTCGTGGGGAGCAATATTTGGTTAGATGGGCAGTTCCTAAGCTTCATGACATTGATGCATTATCAAGGATGGTTGATCCCTCTCTAAATGGAGCATTTACTATGAAGTCTCTGTCACGTTTTGCTGATATTATTTCCTCTTGCGTACAGCGGGAGCCAGAGTTTCGACCACCAATTTCTGAAATTGTCCAGGAACTCTTACAAATGGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase_Tyr

Protein Analysis

747

Amino Acids

81.65

Weight (kDa)

6.48

Isoelectric Point (pI)

42.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011536)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g04500 FvH4_3g04500 FvH4_3g04500
malus_domestica	MD05G1322700.v1.1 MD10G1300600.v1.1
prunus_persica	Prupe.4G039900_v2.0.a1 Prupe.4G039900_v2.0.a1 Prupe.4G039900_v2.0.a1
pyrus_communis	pycom05g29700 pycom10g25350
rosa_chinensis	RchiOBHm_Chr5g0007431
rosa_laevigata	RLG00000031456
rosa_multiflora	Rmu_sc0003826.1_g000001
rosa_roxburghii	Rroxscaffold_1G00069040
rosa_rugosa	Rorug04G0426800
rosa_samantha	Rh5AG055200 Rh5BG052800 Rh5CG062600 Rh5DG051800
rosa_wichuraiana	Rw5G005490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1323
Acc16I	TGCGCA	1 cut(s)	1718
Acc36I	ACCTGC	2 cut(s)	694, 1323
Acc65I	GGTACC	1 cut(s)	1292
AccB1I	GGYRCC	4 cut(s)	763, 790, 1292, 1893
AccB7I	CCANNNNNTGG	1 cut(s)	1112
AccI	GTMKAC	2 cut(s)	1400, 1965
AccII	CGCG	1 cut(s)	2026
AccIII	TCCGGA	2 cut(s)	1057, 1937
AciI	CCGC	7 cut(s)	104, 465, 1157, 1723, 2005, 2026, 2179
AclI	AACGTT	1 cut(s)	366
AclWI	GGATC	6 cut(s)	522, 639, 654, 1012, 1224, 2099
AcsI	RAATTY	7 cut(s)	709, 853, 872, 915, 1250, 1423, 1538
AcuI	CTGAAG	2 cut(s)	1376, 1437
AfaI	GTAC	8 cut(s)	24, 924, 1033, 1294, 1567, 1637, 1839, 2175
AfiI	CCNNNNNNNGG	7 cut(s)	149, 556, 557, 1090, 1112, 1288, 2019
AflIII	ACRYGT	1 cut(s)	1840
AhlI	ACTAGT	1 cut(s)	1594
AjiI	CACGTC	1 cut(s)	1843
AjnI	CCWGG	4 cut(s)	403, 603, 785, 2217
AjuI	GAANNNNNNNTTGG	2 cut(s)	1413, 1445
Alw21I	GWGCWC	3 cut(s)	1750, 1791, 1995
Alw26I	GTCTC	4 cut(s)	165, 1849, 1881, 2142
Alw44I	GTGCAC	1 cut(s)	1787
AlwI	GGATC	6 cut(s)	522, 639, 654, 1012, 1224, 2099
AlwNI	CAGNNNCTG	1 cut(s)	649
Aor13HI	TCCGGA	2 cut(s)	1057, 1937
AoxI	GGCC	3 cut(s)	677, 1310, 2027
ApaLI	GTGCAC	1 cut(s)	1787
ApeKI	GCWGC	4 cut(s)	994, 1522, 1739, 1919
ApoI	RAATTY	7 cut(s)	709, 853, 872, 915, 1250, 1423, 1538
Asp700I	GAANNNNTTC	1 cut(s)	1065
Asp718I	GGTACC	1 cut(s)	1292
AspA2I	CCTAGG	1 cut(s)	866
AspLEI	GCGC	1 cut(s)	1719
AspS9I	GGNCC	3 cut(s)	677, 830, 1310
AsuHPI	GGTGA	4 cut(s)	194, 278, 333, 747
AvaII	GGWCC	1 cut(s)	830
AvrII	CCTAGG	1 cut(s)	866
BaeGI	GKGCMC	4 cut(s)	551, 793, 1791, 1896
BanI	GGYRCC	4 cut(s)	763, 790, 1292, 1893
BanII	GRGCYC	2 cut(s)	1750, 1995
BauI	CACGAG	2 cut(s)	1763, 2031
BbsI	GAAGAC	2 cut(s)	202, 938
Bbv12I	GWGCWC	3 cut(s)	1750, 1791, 1995
BbvI	GCAGC	4 cut(s)	1006, 1534, 1726, 1906
BccI	CCATC	8 cut(s)	346, 465, 716, 760, 1106, 1701, 2049, 2092
BcgI	CGANNNNNNTGC	2 cut(s)	581, 615
BciT130I	CCWGG	4 cut(s)	405, 605, 787, 2219
BclI	TGATCA	2 cut(s)	184, 1474
BcoDI	GTCTC	4 cut(s)	165, 1849, 1881, 2142
BcuI	ACTAGT	1 cut(s)	1594
BfaI	CTAG	9 cut(s)	131, 867, 950, 1023, 1317, 1550, 1572, 1595, 1988
BfmI	CTRYAG	2 cut(s)	641, 1966
BfuAI	ACCTGC	2 cut(s)	694, 1323
BisI	GCNGC	8 cut(s)	105, 466, 995, 1157, 1523, 1740, 1920, 2027
BlnI	CCTAGG	1 cut(s)	866
BlpI	GCTNAGC	2 cut(s)	1464, 1611
BlsI	GCNGC	8 cut(s)	106, 467, 996, 1158, 1524, 1741, 1921, 2028
BmcAI	AGTACT	2 cut(s)	924, 1033
Bme1390I	CCNGG	4 cut(s)	405, 605, 787, 2219
Bme18I	GGWCC	1 cut(s)	830
BmgBI	CACGTC	1 cut(s)	1843
BmgT120I	GGNCC	3 cut(s)	677, 830, 1310
BmiI	GGNNCC	6 cut(s)	613, 765, 792, 1294, 1895, 2184
BmrFI	CCNGG	4 cut(s)	405, 605, 787, 2219
BmrI	ACTGGG	2 cut(s)	260, 906
BmsI	GCATC	8 cut(s)	39, 408, 469, 1234, 1394, 1657, 1728, 2074
BmuI	ACTGGG	2 cut(s)	260, 906
BpiI	GAAGAC	2 cut(s)	202, 938
Bpu10I	CCTNAGC	2 cut(s)	1287, 2067
Bpu1102I	GCTNAGC	2 cut(s)	1464, 1611
BpuEI	CTTGAG	1 cut(s)	1772
BsaBI	GATNNNNATC	1 cut(s)	726
BsaI	GGTCTC	1 cut(s)	165
BsaJI	CCNNGG	4 cut(s)	403, 786, 812, 866
BsaWI	WCCGGW	2 cut(s)	1057, 1937
BsaXI	ACNNNNNCTCC	2 cut(s)	2174, 2204
Bsc4I	CCNNNNNNNGG	7 cut(s)	149, 556, 557, 1090, 1112, 1288, 2019
Bse1I	ACTGG	8 cut(s)	194, 255, 397, 502, 842, 901, 1113, 1506
Bse3DI	GCAATG	1 cut(s)	1725
Bse8I	GATNNNNATC	1 cut(s)	726
BseAI	TCCGGA	2 cut(s)	1057, 1937
BseBI	CCWGG	4 cut(s)	405, 605, 787, 2219
BseDI	CCNNGG	4 cut(s)	403, 786, 812, 866
BseGI	GGATG	5 cut(s)	399, 1117, 1249, 1719, 2103
BseJI	GATNNNNATC	1 cut(s)	726
BseLI	CCNNNNNNNGG	7 cut(s)	149, 556, 557, 1090, 1112, 1288, 2019
BseMI	GCAATG	1 cut(s)	1725
BseMII	CTCAG	5 cut(s)	440, 475, 687, 1602, 1860
BseNI	ACTGG	8 cut(s)	194, 255, 397, 502, 842, 901, 1113, 1506
BseRI	GAGGAG	6 cut(s)	132, 183, 1805, 1808, 1854, 1889
BseSI	GKGCMC	4 cut(s)	551, 793, 1791, 1896
BseXI	GCAGC	4 cut(s)	1006, 1534, 1726, 1906
BseYI	CCCAGC	1 cut(s)	262
Bsh1236I	CGCG	1 cut(s)	2026
BshFI	GGCC	3 cut(s)	679, 1312, 2029
BshNI	GGYRCC	4 cut(s)	763, 790, 1292, 1893
BsiHKAI	GWGCWC	3 cut(s)	1750, 1791, 1995
BsiSI	CCGG	3 cut(s)	761, 1058, 1938
BslFI	GGGAC	4 cut(s)	291, 1067, 1323, 1669
BslI	CCNNNNNNNGG	7 cut(s)	149, 556, 557, 1090, 1112, 1288, 2019
BsmAI	GTCTC	4 cut(s)	165, 1849, 1881, 2142
BsmBI	CGTCTC	1 cut(s)	1849
BsmFI	GGGAC	4 cut(s)	291, 1067, 1323, 1669
BsmI	GAATGC	1 cut(s)	209
BsnI	GGCC	3 cut(s)	679, 1312, 2029
Bso31I	GGTCTC	1 cut(s)	165
Bsp1286I	GDGCHC	6 cut(s)	551, 793, 1750, 1791, 1896, 1995
Bsp13I	TCCGGA	2 cut(s)	1057, 1937
Bsp1407I	TGTACA	1 cut(s)	1565
Bsp143I	GATC	9 cut(s)	184, 514, 631, 646, 1017, 1216, 1474, 1546, 2104
Bsp1720I	GCTNAGC	2 cut(s)	1464, 1611
BspACI	CCGC	7 cut(s)	104, 465, 1157, 1723, 2005, 2026, 2179
BspANI	GGCC	3 cut(s)	679, 1312, 2029
BspCNI	CTCAG	5 cut(s)	439, 474, 686, 1603, 1859
BspEI	TCCGGA	2 cut(s)	1057, 1937
BspFNI	CGCG	1 cut(s)	2026
BspHI	TCATGA	1 cut(s)	2074
BspLI	GGNNCC	6 cut(s)	613, 765, 792, 1294, 1895, 2184
BspMI	ACCTGC	2 cut(s)	694, 1323
BspPI	GGATC	6 cut(s)	522, 639, 654, 1012, 1224, 2099
BspT107I	GGYRCC	4 cut(s)	763, 790, 1292, 1893
BspTNI	GGTCTC	1 cut(s)	165
BsrDI	GCAATG	1 cut(s)	1725
BsrGI	TGTACA	1 cut(s)	1565
BsrI	ACTGG	8 cut(s)	194, 255, 397, 502, 842, 901, 1113, 1506
BssECI	CCNNGG	4 cut(s)	403, 786, 812, 866
BssMI	GATC	9 cut(s)	184, 514, 631, 646, 1017, 1216, 1474, 1546, 2104
BssNAI	GTATAC	1 cut(s)	1401
BssSI	CACGAG	2 cut(s)	1763, 2031
BssT1I	CCWWGG	2 cut(s)	812, 866
Bst1107I	GTATAC	1 cut(s)	1401
Bst2BI	CACGAG	2 cut(s)	1763, 2031
Bst2UI	CCWGG	4 cut(s)	405, 605, 787, 2219
Bst4CI	ACNGT	8 cut(s)	358, 441, 546, 892, 1043, 1381, 1607, 1853
Bst6I	CTCTTC	3 cut(s)	150, 287, 1340
BstAUI	TGTACA	1 cut(s)	1565
BstC8I	GCNNGC	3 cut(s)	1438, 1442, 1578
BstENI	CCTNNNNNAGG	3 cut(s)	147, 1286, 2017
BstF5I	GGATG	5 cut(s)	399, 1117, 1249, 1719, 2103
BstFNI	CGCG	1 cut(s)	2026
BstHHI	GCGC	1 cut(s)	1719
BstKTI	GATC	9 cut(s)	187, 517, 634, 649, 1020, 1219, 1477, 1549, 2107
BstMAI	GTCTC	4 cut(s)	165, 1849, 1881, 2142
BstMBI	GATC	9 cut(s)	184, 514, 631, 646, 1017, 1216, 1474, 1546, 2104
BstMWI	GCNNNNNNNGC	4 cut(s)	1000, 1446, 1736, 1745
BstNI	CCWGG	4 cut(s)	405, 605, 787, 2219
BstNSI	RCATGY	3 cut(s)	31, 1444, 1580
BstSCI	CCNGG	4 cut(s)	403, 603, 785, 2217
BstSFI	CTRYAG	2 cut(s)	641, 1966
BstSLI	GKGCMC	4 cut(s)	551, 793, 1791, 1896
BstUI	CGCG	1 cut(s)	2026
BstV1I	GCAGC	4 cut(s)	1006, 1534, 1726, 1906
BstV2I	GAAGAC	2 cut(s)	202, 938
BstX2I	RGATCY	4 cut(s)	514, 631, 646, 1017
BstYI	RGATCY	4 cut(s)	514, 631, 646, 1017
BstZ17I	GTATAC	1 cut(s)	1401
BsuRI	GGCC	3 cut(s)	679, 1312, 2029
BtrI	CACGTC	1 cut(s)	1843
BtsCI	GGATG	5 cut(s)	399, 1117, 1249, 1719, 2103
BtsI	GCAGTG	3 cut(s)	1456, 1670, 1902
BtsIMutI	CAGTG	8 cut(s)	187, 390, 894, 1048, 1106, 1456, 1670, 1902
BveI	ACCTGC	2 cut(s)	694, 1323
Cac8I	GCNNGC	3 cut(s)	1438, 1442, 1578
CaiI	CAGNNNCTG	1 cut(s)	649
CciI	TCATGA	1 cut(s)	2074
CfoI	GCGC	1 cut(s)	1719
Cfr13I	GGNCC	3 cut(s)	677, 830, 1310
CseI	GACGC	1 cut(s)	196
Csp6I	GTAC	8 cut(s)	23, 923, 1032, 1293, 1566, 1636, 1838, 2174
CviQI	GTAC	8 cut(s)	23, 923, 1032, 1293, 1566, 1636, 1838, 2174
DpnI	GATC	9 cut(s)	186, 516, 633, 648, 1019, 1218, 1476, 1548, 2106
DpnII	GATC	9 cut(s)	184, 514, 631, 646, 1017, 1216, 1474, 1546, 2104
Eam1104I	CTCTTC	3 cut(s)	150, 287, 1340
EarI	CTCTTC	3 cut(s)	150, 287, 1340
EciI	GGCGGA	1 cut(s)	2020
Ecl136II	GAGCTC	2 cut(s)	1748, 1993
Eco130I	CCWWGG	2 cut(s)	812, 866
Eco24I	GRGCYC	2 cut(s)	1750, 1995
Eco31I	GGTCTC	1 cut(s)	165
Eco47I	GGWCC	1 cut(s)	830
Eco53kI	GAGCTC	2 cut(s)	1748, 1993
Eco57I	CTGAAG	2 cut(s)	1376, 1437
EcoICRI	GAGCTC	2 cut(s)	1748, 1993
EcoNI	CCTNNNNNAGG	3 cut(s)	147, 1286, 2017
EcoRII	CCWGG	4 cut(s)	403, 603, 785, 2217
EcoT14I	CCWWGG	2 cut(s)	812, 866
EcoT22I	ATGCAT	2 cut(s)	1209, 2089
EcoT38I	GRGCYC	2 cut(s)	1750, 1995
ErhI	CCWWGG	2 cut(s)	812, 866
Esp3I	CGTCTC	1 cut(s)	1849
FalI	AAGNNNNNCTT	2 cut(s)	141, 173
FaqI	GGGAC	4 cut(s)	291, 1067, 1323, 1669
FauI	CCCGC	1 cut(s)	2172
FbaI	TGATCA	2 cut(s)	184, 1474
FblI	GTMKAC	2 cut(s)	1400, 1965
Fnu4HI	GCNGC	8 cut(s)	105, 466, 995, 1157, 1523, 1740, 1920, 2027
FokI	GGATG	5 cut(s)	386, 1124, 1256, 1706, 2110
FriOI	GRGCYC	2 cut(s)	1750, 1995
Fsp4HI	GCNGC	8 cut(s)	105, 466, 995, 1157, 1523, 1740, 1920, 2027
FspAI	RTGCGCAY	1 cut(s)	1718
FspBI	CTAG	9 cut(s)	131, 867, 950, 1023, 1317, 1550, 1572, 1595, 1988
FspI	TGCGCA	1 cut(s)	1718
GlaI	GCGC	1 cut(s)	1718
GluI	GCNGC	8 cut(s)	105, 466, 995, 1157, 1523, 1740, 1920, 2027
GsaI	CCCAGC	1 cut(s)	266
HaeIII	GGCC	3 cut(s)	679, 1312, 2029
HapII	CCGG	3 cut(s)	761, 1058, 1938
HgaI	GACGC	1 cut(s)	196
HhaI	GCGC	1 cut(s)	1719
Hin6I	GCGC	1 cut(s)	1717
HinP1I	GCGC	1 cut(s)	1717
HincII	GTYRAC	2 cut(s)	542, 1228
HindII	GTYRAC	2 cut(s)	542, 1228
HindIII	AAGCTT	3 cut(s)	233, 1466, 2069
HinfI	GANTC	6 cut(s)	55, 279, 1046, 1348, 1657, 1934
HpaII	CCGG	3 cut(s)	761, 1058, 1938
HphI	GGTGA	4 cut(s)	194, 278, 333, 747
Hpy188I	TCNGA	7 cut(s)	651, 716, 1417, 1698, 1849, 1869, 2209
Hpy188III	TCNNGA	7 cut(s)	361, 1058, 1472, 1495, 1751, 1938, 2075
HpyAV	CCTTC	6 cut(s)	783, 804, 843, 963, 1055, 1207
HpyCH4III	ACNGT	8 cut(s)	358, 441, 546, 892, 1043, 1381, 1607, 1853
HpyCH4IV	ACGT	5 cut(s)	123, 219, 366, 1842, 2146
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1000, 1446, 1736, 1745
HpySE526I	ACGT	5 cut(s)	123, 219, 366, 1842, 2146
HspAI	GCGC	1 cut(s)	1717
Kpn2I	TCCGGA	2 cut(s)	1057, 1937
KpnI	GGTACC	1 cut(s)	1296
Ksp22I	TGATCA	2 cut(s)	184, 1474
Kzo9I	GATC	9 cut(s)	184, 514, 631, 646, 1017, 1216, 1474, 1546, 2104
LmnI	GCTCC	8 cut(s)	242, 1433, 1736, 1867, 1998, 2038, 2120, 2182
Lsp1109I	GCAGC	4 cut(s)	1006, 1534, 1726, 1906
LweI	GCATC	8 cut(s)	39, 408, 469, 1234, 1394, 1657, 1728, 2074
MaeI	CTAG	9 cut(s)	131, 867, 950, 1023, 1317, 1550, 1572, 1595, 1988
MaeII	ACGT	5 cut(s)	123, 219, 366, 1842, 2146
MaeIII	GTNAC	7 cut(s)	220, 624, 844, 892, 1321, 1601, 2142
MalI	GATC	9 cut(s)	186, 516, 633, 648, 1019, 1218, 1476, 1548, 2106
MboI	GATC	9 cut(s)	184, 514, 631, 646, 1017, 1216, 1474, 1546, 2104
MfeI	CAATTG	1 cut(s)	93
MflI	RGATCY	4 cut(s)	514, 631, 646, 1017
MhlI	GDGCHC	6 cut(s)	551, 793, 1750, 1791, 1896, 1995
MlyI	GAGTC	3 cut(s)	273, 1357, 1651
MmeI	TCCRAC	3 cut(s)	145, 589, 889
Mph1103I	ATGCAT	2 cut(s)	1209, 2089
MroI	TCCGGA	2 cut(s)	1057, 1937
MroXI	GAANNNNTTC	1 cut(s)	1065
MseI	TTAA	4 cut(s)	237, 533, 618, 1005
MslI	CAYNNNNRTG	2 cut(s)	1680, 1956
MspA1I	CMGCKG	3 cut(s)	262, 465, 2179
MspI	CCGG	3 cut(s)	761, 1058, 1938
MspR9I	CCNGG	4 cut(s)	405, 605, 787, 2219
MunI	CAATTG	1 cut(s)	93
Mva1269I	GAATGC	1 cut(s)	209
MvaI	CCWGG	4 cut(s)	405, 605, 787, 2219
MvnI	CGCG	1 cut(s)	2026
MwoI	GCNNNNNNNGC	4 cut(s)	1000, 1446, 1736, 1745
NdeII	GATC	9 cut(s)	184, 514, 631, 646, 1017, 1216, 1474, 1546, 2104
NlaIV	GGNNCC	6 cut(s)	613, 765, 792, 1294, 1895, 2184
NmuCI	GTSAC	2 cut(s)	892, 2142
NsbI	TGCGCA	1 cut(s)	1718
NsiI	ATGCAT	2 cut(s)	1209, 2089
NspI	RCATGY	3 cut(s)	31, 1444, 1580
PaeI	GCATGC	2 cut(s)	1444, 1580
PagI	TCATGA	1 cut(s)	2074
PaqCI	CACCTGC	1 cut(s)	1323
PctI	GAATGC	1 cut(s)	209
PdmI	GAANNNNTTC	1 cut(s)	1065
PfeI	GAWTC	3 cut(s)	55, 1046, 1934
PflMI	CCANNNNNTGG	1 cut(s)	1112
PfoI	TCCNGGA	1 cut(s)	2217
PkrI	GCNGC	8 cut(s)	106, 467, 996, 1158, 1524, 1741, 1921, 2028
PleI	GAGTC	3 cut(s)	273, 1356, 1651
PpsI	GAGTC	3 cut(s)	273, 1356, 1651
Psp124BI	GAGCTC	2 cut(s)	1750, 1995
Psp1406I	AACGTT	1 cut(s)	366
Psp6I	CCWGG	4 cut(s)	403, 603, 785, 2217
PspFI	CCCAGC	1 cut(s)	262
PspGI	CCWGG	4 cut(s)	403, 603, 785, 2217
PspN4I	GGNNCC	6 cut(s)	613, 765, 792, 1294, 1895, 2184
PspPI	GGNCC	3 cut(s)	677, 830, 1310
PstNI	CAGNNNCTG	1 cut(s)	649
PsuI	RGATCY	4 cut(s)	514, 631, 646, 1017
PvuII	CAGCTG	1 cut(s)	262
RsaI	GTAC	8 cut(s)	24, 924, 1033, 1294, 1567, 1637, 1839, 2175
RsaNI	GTAC	8 cut(s)	23, 923, 1032, 1293, 1566, 1636, 1838, 2174
RseI	CAYNNNNRTG	2 cut(s)	1680, 1956
SacI	GAGCTC	2 cut(s)	1750, 1995
SaqAI	TTAA	4 cut(s)	237, 533, 618, 1005
SatI	GCNGC	8 cut(s)	105, 466, 995, 1157, 1523, 1740, 1920, 2027
Sau3AI	GATC	9 cut(s)	184, 514, 631, 646, 1017, 1216, 1474, 1546, 2104
Sau96I	GGNCC	3 cut(s)	677, 830, 1310
ScaI	AGTACT	2 cut(s)	924, 1033
SchI	GAGTC	3 cut(s)	273, 1357, 1651
ScrFI	CCNGG	4 cut(s)	405, 605, 787, 2219
SduI	GDGCHC	6 cut(s)	551, 793, 1750, 1791, 1896, 1995
SfaNI	GCATC	8 cut(s)	39, 408, 469, 1234, 1394, 1657, 1728, 2074
SfcI	CTRYAG	2 cut(s)	641, 1966
SinI	GGWCC	1 cut(s)	830
SmiMI	CAYNNNNRTG	2 cut(s)	1680, 1956
SmlI	CTYRAG	1 cut(s)	1751
SmoI	CTYRAG	1 cut(s)	1751
SpeI	ACTAGT	1 cut(s)	1594
SphI	GCATGC	2 cut(s)	1444, 1580
SsiI	CCGC	7 cut(s)	104, 465, 1157, 1723, 2005, 2026, 2179
SspI	AATATT	2 cut(s)	1585, 2045
SspMI	CTAG	9 cut(s)	131, 867, 950, 1023, 1317, 1550, 1572, 1595, 1988
SstI	GAGCTC	2 cut(s)	1750, 1995
StyD4I	CCNGG	4 cut(s)	403, 603, 785, 2217
StyI	CCWWGG	2 cut(s)	812, 866
TaaI	ACNGT	8 cut(s)	358, 441, 546, 892, 1043, 1381, 1607, 1853
TaiI	ACGT	5 cut(s)	126, 222, 369, 1845, 2149
TaqI	TCGA	3 cut(s)	1590, 1821, 2194
TatI	WGTACW	4 cut(s)	922, 1031, 1565, 1837
TauI	GCSGC	4 cut(s)	107, 468, 1159, 2029
TfiI	GAWTC	3 cut(s)	55, 1046, 1934
Tru1I	TTAA	4 cut(s)	237, 533, 618, 1005
Tru9I	TTAA	4 cut(s)	237, 533, 618, 1005
TscAI	CASTG	8 cut(s)	194, 397, 901, 1048, 1113, 1456, 1677, 1909
TseFI	GTSAC	2 cut(s)	892, 2142
TseI	GCWGC	4 cut(s)	994, 1522, 1739, 1919
Tsp45I	GTSAC	2 cut(s)	892, 2142
TspRI	CASTG	8 cut(s)	194, 397, 901, 1048, 1113, 1456, 1677, 1909
Van91I	CCANNNNNTGG	1 cut(s)	1112
VneI	GTGCAC	1 cut(s)	1787
VpaK11BI	GGWCC	1 cut(s)	830
XagI	CCTNNNNNAGG	3 cut(s)	147, 1286, 2017
XapI	RAATTY	7 cut(s)	709, 853, 872, 915, 1250, 1423, 1538
XceI	RCATGY	3 cut(s)	31, 1444, 1580
XmaJI	CCTAGG	1 cut(s)	866
XmiI	GTMKAC	2 cut(s)	1400, 1965
XmnI	GAANNNNTTC	1 cut(s)	1065
XspI	CTAG	9 cut(s)	131, 867, 950, 1023, 1317, 1550, 1572, 1595, 1988
ZrmI	AGTACT	2 cut(s)	924, 1033
Zsp2I	ATGCAT	2 cut(s)	1209, 2089

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.