Belongs to the peptidase C1 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g07700 |
| malus_domestica | MD05G1300100.v1.1 |
| prunus_persica | Prupe.4G062200_v2.0.a1 Prupe.4G062200_v2.0.a1 Prupe.4G062200_v2.0.a1 |
| pyrus_communis | pycom05g27800 pycom05g27830 |
| rosa_chinensis | RchiOBHm_Chr5g0010931 |
| rosa_laevigata | RLG00000031798 |
| rosa_multiflora | Rmu_sc0001895.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00065440 |
| rosa_rugosa | Rorug04G0453800 |
| rosa_samantha | Rh5AG086400 Rh5BG080900 Rh5CG093400 Rh5DG081000 |
| rosa_wichuraiana | Rw0G017430 Rw0G017880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 740 |
| Acc36I | ACCTGC | 1 cut(s) | 740 |
| AccB1I | GGYRCC | 1 cut(s) | 728 |
| AciI | CCGC | 4 cut(s) | 966, 1187, 1242, 1340 |
| AclWI | GGATC | 1 cut(s) | 908 |
| AcsI | RAATTY | 4 cut(s) | 214, 888, 991, 1292 |
| AcuI | CTGAAG | 1 cut(s) | 809 |
| AfaI | GTAC | 2 cut(s) | 86, 712 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 657 |
| AflII | CTTAAG | 1 cut(s) | 1415 |
| AflIII | ACRYGT | 1 cut(s) | 1274 |
| AgeI | ACCGGT | 1 cut(s) | 803 |
| AhlI | ACTAGT | 1 cut(s) | 1004 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1460, 1492 |
| AluBI | AGCT | 8 cut(s) | 56, 122, 142, 272, 427, 692, 1265, 1445 |
| AluI | AGCT | 8 cut(s) | 56, 122, 142, 272, 427, 692, 1265, 1445 |
| Alw21I | GWGCWC | 1 cut(s) | 144 |
| Alw26I | GTCTC | 8 cut(s) | 77, 561, 788, 794, 1165, 1239, 1265, 1422 |
| AlwI | GGATC | 1 cut(s) | 908 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 692 |
| AoxI | GGCC | 1 cut(s) | 1405 |
| ApeKI | GCWGC | 8 cut(s) | 266, 269, 406, 409, 427, 1347, 1445, 1547 |
| ApoI | RAATTY | 4 cut(s) | 214, 888, 991, 1292 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 635, 667 |
| AsiGI | ACCGGT | 1 cut(s) | 803 |
| AspLEI | GCGC | 2 cut(s) | 556, 1557 |
| AspS9I | GGNCC | 2 cut(s) | 490, 1405 |
| AsuHPI | GGTGA | 5 cut(s) | 553, 733, 757, 911, 980 |
| AvaII | GGWCC | 1 cut(s) | 490 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 694, 727 |
| BanI | GGYRCC | 1 cut(s) | 728 |
| BanII | GRGCYC | 1 cut(s) | 144 |
| BbsI | GAAGAC | 1 cut(s) | 1514 |
| Bbv12I | GWGCWC | 1 cut(s) | 144 |
| BbvCI | CCTCAGC | 2 cut(s) | 123, 189 |
| BbvI | GCAGC | 8 cut(s) | 253, 281, 414, 418, 421, 1334, 1432, 1534 |
| BccI | CCATC | 6 cut(s) | 767, 845, 890, 1009, 1135, 1524 |
| BceAI | ACGGC | 1 cut(s) | 920 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 331, 365, 385, 419 |
| BciVI | GTATCC | 1 cut(s) | 1016 |
| BclI | TGATCA | 1 cut(s) | 928 |
| BcoDI | GTCTC | 8 cut(s) | 77, 561, 788, 794, 1165, 1239, 1265, 1422 |
| BcuI | ACTAGT | 1 cut(s) | 1004 |
| BfaI | CTAG | 3 cut(s) | 53, 1005, 1558 |
| BfmI | CTRYAG | 3 cut(s) | 267, 625, 1523 |
| BfrI | CTTAAG | 1 cut(s) | 1415 |
| BfuAI | ACCTGC | 1 cut(s) | 740 |
| BfuI | GTATCC | 1 cut(s) | 1016 |
| BisI | GCNGC | 8 cut(s) | 267, 270, 407, 410, 428, 1348, 1446, 1548 |
| BlsI | GCNGC | 8 cut(s) | 268, 271, 408, 411, 429, 1349, 1447, 1549 |
| BmcAI | AGTACT | 1 cut(s) | 86 |
| Bme18I | GGWCC | 1 cut(s) | 490 |
| BmgT120I | GGNCC | 2 cut(s) | 490, 1405 |
| BmiI | GGNNCC | 2 cut(s) | 730, 1357 |
| BmsI | GCATC | 3 cut(s) | 56, 427, 546 |
| BpiI | GAAGAC | 1 cut(s) | 1514 |
| BpmI | CTGGAG | 1 cut(s) | 1185 |
| Bpu10I | CCTNAGC | 2 cut(s) | 123, 189 |
| BpuEI | CTTGAG | 1 cut(s) | 865 |
| BsaAI | YACGTR | 1 cut(s) | 861 |
| BsaI | GGTCTC | 2 cut(s) | 561, 794 |
| BsaJI | CCNNGG | 4 cut(s) | 493, 744, 1080, 1481 |
| BsaWI | WCCGGW | 3 cut(s) | 530, 563, 803 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 657 |
| Bse118I | RCCGGY | 1 cut(s) | 803 |
| Bse1I | ACTGG | 6 cut(s) | 27, 708, 983, 1178, 1202, 1357 |
| Bse3DI | GCAATG | 3 cut(s) | 331, 676, 1557 |
| BseDI | CCNNGG | 4 cut(s) | 493, 744, 1080, 1481 |
| BseGI | GGATG | 3 cut(s) | 442, 1020, 1516 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 657 |
| BseMI | GCAATG | 3 cut(s) | 331, 676, 1557 |
| BseMII | CTCAG | 6 cut(s) | 72, 114, 180, 244, 302, 1048 |
| BseNI | ACTGG | 6 cut(s) | 27, 708, 983, 1178, 1202, 1357 |
| BseRI | GAGGAG | 6 cut(s) | 140, 206, 344, 412, 1128, 1415 |
| BseXI | GCAGC | 8 cut(s) | 253, 281, 414, 418, 421, 1334, 1432, 1534 |
| BsgI | GTGCAG | 3 cut(s) | 1089, 1095, 1333 |
| BshFI | GGCC | 1 cut(s) | 1407 |
| BshNI | GGYRCC | 1 cut(s) | 728 |
| BshTI | ACCGGT | 1 cut(s) | 803 |
| BsiHKAI | GWGCWC | 1 cut(s) | 144 |
| BsiSI | CCGG | 3 cut(s) | 531, 564, 804 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 657 |
| BsmAI | GTCTC | 8 cut(s) | 77, 561, 788, 794, 1165, 1239, 1265, 1422 |
| BsmI | GAATGC | 2 cut(s) | 408, 1342 |
| BsnI | GGCC | 1 cut(s) | 1407 |
| Bso31I | GGTCTC | 2 cut(s) | 561, 794 |
| Bsp1286I | GDGCHC | 1 cut(s) | 144 |
| Bsp143I | GATC | 3 cut(s) | 372, 913, 928 |
| Bsp19I | CCATGG | 2 cut(s) | 1080, 1481 |
| BspACI | CCGC | 4 cut(s) | 966, 1187, 1242, 1340 |
| BspANI | GGCC | 1 cut(s) | 1407 |
| BspCNI | CTCAG | 6 cut(s) | 73, 115, 181, 243, 301, 1047 |
| BspLI | GGNNCC | 2 cut(s) | 730, 1357 |
| BspMAI | CTGCAG | 1 cut(s) | 271 |
| BspMI | ACCTGC | 1 cut(s) | 740 |
| BspPI | GGATC | 1 cut(s) | 908 |
| BspT107I | GGYRCC | 1 cut(s) | 728 |
| BspTI | CTTAAG | 1 cut(s) | 1415 |
| BspTNI | GGTCTC | 2 cut(s) | 561, 794 |
| BsrDI | GCAATG | 3 cut(s) | 331, 676, 1557 |
| BsrFI | RCCGGY | 1 cut(s) | 803 |
| BsrI | ACTGG | 6 cut(s) | 27, 708, 983, 1178, 1202, 1357 |
| BssAI | RCCGGY | 1 cut(s) | 803 |
| BssECI | CCNNGG | 4 cut(s) | 493, 744, 1080, 1481 |
| BssMI | GATC | 3 cut(s) | 372, 913, 928 |
| BssT1I | CCWWGG | 4 cut(s) | 493, 744, 1080, 1481 |
| Bst4CI | ACNGT | 2 cut(s) | 109, 1527 |
| Bst6I | CTCTTC | 3 cut(s) | 197, 786, 1448 |
| BstAFI | CTTAAG | 1 cut(s) | 1415 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1076 |
| BstBAI | YACGTR | 1 cut(s) | 861 |
| BstC8I | GCNNGC | 3 cut(s) | 58, 186, 414 |
| BstDEI | CTNAG | 6 cut(s) | 81, 123, 189, 230, 288, 1034 |
| BstDSI | CCRYGG | 2 cut(s) | 1080, 1481 |
| BstEII | GGTNACC | 1 cut(s) | 559 |
| BstF5I | GGATG | 3 cut(s) | 442, 1020, 1516 |
| BstHHI | GCGC | 2 cut(s) | 556, 1557 |
| BstKTI | GATC | 3 cut(s) | 375, 916, 931 |
| BstMAI | GTCTC | 8 cut(s) | 77, 561, 788, 794, 1165, 1239, 1265, 1422 |
| BstMBI | GATC | 3 cut(s) | 372, 913, 928 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 53, 148, 675, 1076 |
| BstNSI | RCATGY | 3 cut(s) | 188, 254, 1278 |
| BstPI | GGTNACC | 1 cut(s) | 559 |
| BstSFI | CTRYAG | 3 cut(s) | 267, 625, 1523 |
| BstV1I | GCAGC | 8 cut(s) | 253, 281, 414, 418, 421, 1334, 1432, 1534 |
| BstV2I | GAAGAC | 1 cut(s) | 1514 |
| BsuI | GTATCC | 1 cut(s) | 1016 |
| BsuRI | GGCC | 1 cut(s) | 1407 |
| BtgI | CCRYGG | 2 cut(s) | 1080, 1481 |
| BtgZI | GCGATG | 1 cut(s) | 1407 |
| BtsCI | GGATG | 3 cut(s) | 442, 1020, 1516 |
| BtsIMutI | CAGTG | 5 cut(s) | 114, 1185, 1209, 1350, 1532 |
| BveI | ACCTGC | 1 cut(s) | 740 |
| Cac8I | GCNNGC | 3 cut(s) | 58, 186, 414 |
| CaiI | CAGNNNCTG | 1 cut(s) | 692 |
| CfoI | GCGC | 2 cut(s) | 556, 1557 |
| Cfr10I | RCCGGY | 1 cut(s) | 803 |
| Cfr13I | GGNCC | 2 cut(s) | 490, 1405 |
| Csp6I | GTAC | 2 cut(s) | 85, 711 |
| CspAI | ACCGGT | 1 cut(s) | 803 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 703, 738 |
| CviQI | GTAC | 2 cut(s) | 85, 711 |
| DdeI | CTNAG | 6 cut(s) | 81, 123, 189, 230, 288, 1034 |
| DpnI | GATC | 3 cut(s) | 374, 915, 930 |
| DpnII | GATC | 3 cut(s) | 372, 913, 928 |
| Eam1104I | CTCTTC | 3 cut(s) | 197, 786, 1448 |
| EarI | CTCTTC | 3 cut(s) | 197, 786, 1448 |
| Ecl136II | GAGCTC | 1 cut(s) | 142 |
| Eco130I | CCWWGG | 4 cut(s) | 493, 744, 1080, 1481 |
| Eco24I | GRGCYC | 1 cut(s) | 144 |
| Eco31I | GGTCTC | 2 cut(s) | 561, 794 |
| Eco47I | GGWCC | 1 cut(s) | 490 |
| Eco53kI | GAGCTC | 1 cut(s) | 142 |
| Eco57I | CTGAAG | 1 cut(s) | 809 |
| Eco91I | GGTNACC | 1 cut(s) | 559 |
| EcoICRI | GAGCTC | 1 cut(s) | 142 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1405 |
| EcoO65I | GGTNACC | 1 cut(s) | 559 |
| EcoRI | GAATTC | 2 cut(s) | 991, 1292 |
| EcoT14I | CCWWGG | 4 cut(s) | 493, 744, 1080, 1481 |
| EcoT38I | GRGCYC | 1 cut(s) | 144 |
| ErhI | CCWWGG | 4 cut(s) | 493, 744, 1080, 1481 |
| FauNDI | CATATG | 2 cut(s) | 1057, 1330 |
| FbaI | TGATCA | 1 cut(s) | 928 |
| Fnu4HI | GCNGC | 8 cut(s) | 267, 270, 407, 410, 428, 1348, 1446, 1548 |
| FokI | GGATG | 3 cut(s) | 449, 1027, 1503 |
| FriOI | GRGCYC | 1 cut(s) | 144 |
| Fsp4HI | GCNGC | 8 cut(s) | 267, 270, 407, 410, 428, 1348, 1446, 1548 |
| FspBI | CTAG | 3 cut(s) | 53, 1005, 1558 |
| GlaI | GCGC | 2 cut(s) | 555, 1556 |
| GluI | GCNGC | 8 cut(s) | 267, 270, 407, 410, 428, 1348, 1446, 1548 |
| GsuI | CTGGAG | 1 cut(s) | 1185 |
| HaeIII | GGCC | 1 cut(s) | 1407 |
| HapII | CCGG | 3 cut(s) | 531, 564, 804 |
| HhaI | GCGC | 2 cut(s) | 556, 1557 |
| Hin6I | GCGC | 2 cut(s) | 554, 1555 |
| HinP1I | GCGC | 2 cut(s) | 554, 1555 |
| HinfI | GANTC | 3 cut(s) | 226, 361, 1103 |
| HpaII | CCGG | 3 cut(s) | 531, 564, 804 |
| HphI | GGTGA | 5 cut(s) | 553, 733, 757, 911, 980 |
| Hpy166II | GTNNAC | 1 cut(s) | 112 |
| Hpy188I | TCNGA | 5 cut(s) | 291, 586, 910, 961, 1037 |
| Hpy188III | TCNNGA | 1 cut(s) | 220 |
| Hpy8I | GTNNAC | 1 cut(s) | 112 |
| HpyAV | CCTTC | 7 cut(s) | 166, 453, 460, 536, 1013, 1032, 1236 |
| HpyCH4III | ACNGT | 2 cut(s) | 109, 1527 |
| HpyCH4IV | ACGT | 2 cut(s) | 738, 860 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 53, 148, 675, 1076 |
| HpyF3I | CTNAG | 6 cut(s) | 81, 123, 189, 230, 288, 1034 |
| HpySE526I | ACGT | 2 cut(s) | 738, 860 |
| HspAI | GCGC | 2 cut(s) | 554, 1555 |
| Ksp22I | TGATCA | 1 cut(s) | 928 |
| Kzo9I | GATC | 3 cut(s) | 372, 913, 928 |
| LmnI | GCTCC | 4 cut(s) | 139, 193, 445, 586 |
| Lsp1109I | GCAGC | 8 cut(s) | 253, 281, 414, 418, 421, 1334, 1432, 1534 |
| LweI | GCATC | 3 cut(s) | 56, 427, 546 |
| MaeI | CTAG | 3 cut(s) | 53, 1005, 1558 |
| MaeII | ACGT | 2 cut(s) | 738, 860 |
| MaeIII | GTNAC | 7 cut(s) | 475, 559, 605, 739, 763, 1180, 1204 |
| MalI | GATC | 3 cut(s) | 374, 915, 930 |
| MboI | GATC | 3 cut(s) | 372, 913, 928 |
| MboII | GAAGA | 7 cut(s) | 214, 475, 516, 803, 983, 1465, 1519 |
| MhlI | GDGCHC | 1 cut(s) | 144 |
| MluCI | AATT | 6 cut(s) | 15, 214, 471, 888, 991, 1292 |
| MlyI | GAGTC | 1 cut(s) | 1112 |
| MmeI | TCCRAC | 2 cut(s) | 222, 1157 |
| MseI | TTAA | 2 cut(s) | 486, 1416 |
| MspA1I | CMGCKG | 2 cut(s) | 122, 1265 |
| MspCI | CTTAAG | 1 cut(s) | 1415 |
| MspI | CCGG | 3 cut(s) | 531, 564, 804 |
| Mva1269I | GAATGC | 2 cut(s) | 408, 1342 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 53, 148, 675, 1076 |
| NcoI | CCATGG | 2 cut(s) | 1080, 1481 |
| NdeI | CATATG | 2 cut(s) | 1057, 1330 |
| NdeII | GATC | 3 cut(s) | 372, 913, 928 |
| NlaIV | GGNNCC | 2 cut(s) | 730, 1357 |
| NmuCI | GTSAC | 7 cut(s) | 475, 559, 605, 739, 763, 1180, 1204 |
| NspI | RCATGY | 3 cut(s) | 188, 254, 1278 |
| PaeI | GCATGC | 1 cut(s) | 188 |
| PaqCI | CACCTGC | 1 cut(s) | 740 |
| PciI | ACATGT | 1 cut(s) | 1274 |
| PctI | GAATGC | 2 cut(s) | 408, 1342 |
| PfeI | GAWTC | 2 cut(s) | 226, 361 |
| PinAI | ACCGGT | 1 cut(s) | 803 |
| PkrI | GCNGC | 8 cut(s) | 268, 271, 408, 411, 429, 1349, 1447, 1549 |
| PleI | GAGTC | 1 cut(s) | 1111 |
| PpsI | GAGTC | 1 cut(s) | 1111 |
| Ppu21I | YACGTR | 1 cut(s) | 861 |
| PscI | ACATGT | 1 cut(s) | 1274 |
| Psp124BI | GAGCTC | 1 cut(s) | 144 |
| PspEI | GGTNACC | 1 cut(s) | 559 |
| PspN4I | GGNNCC | 2 cut(s) | 730, 1357 |
| PspPI | GGNCC | 2 cut(s) | 490, 1405 |
| PstI | CTGCAG | 1 cut(s) | 271 |
| PstNI | CAGNNNCTG | 1 cut(s) | 692 |
| PvuII | CAGCTG | 2 cut(s) | 122, 1265 |
| RsaI | GTAC | 2 cut(s) | 86, 712 |
| RsaNI | GTAC | 2 cut(s) | 85, 711 |
| SacI | GAGCTC | 1 cut(s) | 144 |
| SaqAI | TTAA | 2 cut(s) | 486, 1416 |
| SatI | GCNGC | 8 cut(s) | 267, 270, 407, 410, 428, 1348, 1446, 1548 |
| Sau3AI | GATC | 3 cut(s) | 372, 913, 928 |
| Sau96I | GGNCC | 2 cut(s) | 490, 1405 |
| ScaI | AGTACT | 1 cut(s) | 86 |
| SchI | GAGTC | 1 cut(s) | 1112 |
| SduI | GDGCHC | 1 cut(s) | 144 |
| SfaNI | GCATC | 3 cut(s) | 56, 427, 546 |
| SfcI | CTRYAG | 3 cut(s) | 267, 625, 1523 |
| SinI | GGWCC | 1 cut(s) | 490 |
| SmlI | CTYRAG | 2 cut(s) | 880, 1415 |
| SmoI | CTYRAG | 2 cut(s) | 880, 1415 |
| SpeI | ACTAGT | 1 cut(s) | 1004 |
| SphI | GCATGC | 1 cut(s) | 188 |
| Sse9I | AATT | 6 cut(s) | 15, 214, 471, 888, 991, 1292 |
| SsiI | CCGC | 4 cut(s) | 966, 1187, 1242, 1340 |
| SspMI | CTAG | 3 cut(s) | 53, 1005, 1558 |
| SstI | GAGCTC | 1 cut(s) | 144 |
| StyI | CCWWGG | 4 cut(s) | 493, 744, 1080, 1481 |
| TaaI | ACNGT | 2 cut(s) | 109, 1527 |
| TaiI | ACGT | 2 cut(s) | 741, 863 |
| TaqI | TCGA | 1 cut(s) | 540 |
| TasI | AATT | 6 cut(s) | 15, 214, 471, 888, 991, 1292 |
| TatI | WGTACW | 1 cut(s) | 84 |
| TfiI | GAWTC | 2 cut(s) | 226, 361 |
| Tru1I | TTAA | 2 cut(s) | 486, 1416 |
| Tru9I | TTAA | 2 cut(s) | 486, 1416 |
| TscAI | CASTG | 5 cut(s) | 114, 1185, 1209, 1357, 1532 |
| TseFI | GTSAC | 7 cut(s) | 475, 559, 605, 739, 763, 1180, 1204 |
| TseI | GCWGC | 8 cut(s) | 266, 269, 406, 409, 427, 1347, 1445, 1547 |
| Tsp45I | GTSAC | 7 cut(s) | 475, 559, 605, 739, 763, 1180, 1204 |
| TspDTI | ATGAA | 5 cut(s) | 28, 984, 1077, 1300, 1305 |
| TspGWI | ACGGA | 1 cut(s) | 829 |
| TspRI | CASTG | 5 cut(s) | 114, 1185, 1209, 1357, 1532 |
| Vha464I | CTTAAG | 1 cut(s) | 1415 |
| VpaK11BI | GGWCC | 1 cut(s) | 490 |
| XapI | RAATTY | 4 cut(s) | 214, 888, 991, 1292 |
| XceI | RCATGY | 3 cut(s) | 188, 254, 1278 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 500 |
| XspI | CTAG | 3 cut(s) | 53, 1005, 1558 |
| ZrmI | AGTACT | 1 cut(s) | 86 |