Prupe.4G062200_v2.0.a1

Belongs to the peptidase C1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
2979128 .. 2982751
3624 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G062200.1

Sequence Viewer

Length: 1542 bp
ATGGGTTCCCACAAAATTGAGCTGGCTTTTGCTTTCTTCATCTGGGCATCACTGGCATGCTTATCTTCTTGCCATAGCCTCCCAAGTGAATACTCCATAGTGGAGCAAAATGAAGTGCTCAACAACTTCCCTGCAGAAGAGAGAGTGGTGGAGCTCTTCAGGCTCTGGAAGCAGAAGCATGGAAAGGTGTATAGGCAAGCTGAAGAGAGTGAGAGGAGGTTTGAGAATTTCAAGAGGAACCTCAAGTTTGTATTGGAGAAGACTGCAAAGAAGAGGGCTGCAAACAATGCACATGATAGCCAGAGGGTGGGGTTGAATAGGTTTGCTGATATGAGCAATGAGGAGTTTAGGAAGACTTACTTGTCTAAAAAGCTGAAAATGCCCACCAACAAAAGGAACAGTATGATGAGGAGAATGCATGAAGAACCAGTGCATTCATGTGAGGCTCCTTCAGCTTTGGATTGGAGGAAAAAGGGAGCTGTGACTGGTGTCAAGGACCAAGGCAGTTGTGGAAGTTGCTGGGCATTCTCTACCACCGGAGCTATTGAAGGAATCAATGCAATAGCCACCGGAGAACTCATTAGTCTTTCAGAACAAGAACTTGTGGATTGTGACGGTACCAACGAGGGATGTGATGGAGGCTACATGGACTATGCTTTTGAATGGGTTATTGACAATGGTGGTATCGATACAGAAAAAAATTATCCATACACAGGTGTGGATGGTACCTGCAATGTCACCAAGGAGGAAACTAAAGTTGTCACCATTGATGGTTATGAAGATGTGGGAGAAACAGACGGTGATCTTTTATGTGCTGCCGTTCAGCAACCCTTTAGTGTTGGTATAGATGGTTCTGCGTGGGATTTCCAACTATACACAGGAGGAATCTACGATGGCGACTGCTCCGACAATCCAGATGACATTGACCATGCACCTCTGGTCGTAGGATATGGCTCTGAAGGCGATGAAGATTACTGGATTGTAAAGAATTCGTGGGGGACTAGTTGGGGGATGGATGGATACATTTACATAAGAAGGAACACTAATTTAAAATATGGGGTTTGTGCAATCAATGCCATGGCTTCATATCCTACCAAGGAGTCATCTGCACCATCCCCAACAGCTCCACCACCACCTCCTACACCAGTGTCACCACCCCCTCCACCAACACCACCTACACCAGTGACACCACCGCCACCTCCCTCTCCTTCACCAAGTGACTGTGGAGACTTCTCCTATTGTCCAAGTGATGAGACATGCTGTTGCCTCTTTGAATTCTTGGACTACTGCCTCATCTATGGTTGCTGTGAATATCAGAATGCGGTTTGCTGCACCGGAACTGACTACTGCTGCCCAAGTGATTATCCCATTTGTGATGTTGAAGATGGTCTCTGCCTCAAGAATGCGGGAGATTTCTGGGGAGTGTCTGCAAAGAAGAGAAAAATGGCCAAGCACAAGCTCCCATGGACTAAAGTAGAGCAAACAGAGAAGACATACCACCCACTGCAGTGGAAGATGAACCGGTTTGCTGCAATGCGCTGA

Protein Analysis

514

Amino Acids

57.12

Weight (kDa)

4.95

Isoelectric Point (pI)

50.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013633)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 361
Acc36I ACCTGC 1 cut(s) 737
Acc65I GGTACC 2 cut(s) 617, 725
AccB1I GGYRCC 2 cut(s) 617, 725
AccB7I CCANNNNNTGG 1 cut(s) 307
AciI CCGC 3 cut(s) 1193, 1322, 1406
AcoI YGGCCR 1 cut(s) 1446
AcsI RAATTY 3 cut(s) 226, 988, 1274
AcuI CTGAAG 4 cut(s) 142, 222, 435, 978
AdeI CACNNNGTG 1 cut(s) 1217
AfaI GTAC 2 cut(s) 619, 727
AfiI CCNNNNNNNGG 3 cut(s) 307, 393, 713
AgeI ACCGGT 1 cut(s) 1521
AgsI TTSAA 6 cut(s) 232, 316, 548, 662, 1274, 1382
AhlI ACTAGT 1 cut(s) 1001
AleI CACNNNNGTG 2 cut(s) 716, 1507
AluBI AGCT 9 cut(s) 22, 154, 200, 373, 455, 479, 542, 1124, 1459
AluI AGCT 9 cut(s) 22, 154, 200, 373, 455, 479, 542, 1124, 1459
Alw21I GWGCWC 2 cut(s) 120, 156
Alw26I GTCTC 3 cut(s) 1221, 1247, 1394
AlwNI CAGNNNCTG 1 cut(s) 165
AoxI GGCC 1 cut(s) 1446
ApeKI GCWGC 5 cut(s) 278, 815, 1329, 1350, 1529
ApoI RAATTY 3 cut(s) 226, 988, 1274
ArsI GACNNNNNNTTYG 2 cut(s) 641, 673
AsiGI ACCGGT 1 cut(s) 1521
Asp718I GGTACC 2 cut(s) 617, 725
AspLEI GCGC 1 cut(s) 1539
AspS9I GGNCC 1 cut(s) 496
AsuHPI GGTGA 5 cut(s) 730, 754, 812, 1143, 1203
AvaII GGWCC 1 cut(s) 496
BalI TGGCCA 1 cut(s) 1448
BanI GGYRCC 2 cut(s) 617, 725
BanII GRGCYC 1 cut(s) 156
BbsI GAAGAC 3 cut(s) 266, 359, 1496
Bbv12I GWGCWC 2 cut(s) 120, 156
BbvI GCAGC 5 cut(s) 265, 802, 1316, 1337, 1516
BccI CCATC 9 cut(s) 629, 716, 764, 842, 887, 1006, 1010, 1120, 1379
BceAI ACGGC 1 cut(s) 803
BciVI GTATCC 1 cut(s) 1013
BcoDI GTCTC 3 cut(s) 1221, 1247, 1394
BcuI ACTAGT 1 cut(s) 1001
BfaI CTAG 1 cut(s) 1002
BfmI CTRYAG 2 cut(s) 132, 1505
BfuAI ACCTGC 1 cut(s) 737
BfuI GTATCC 1 cut(s) 1013
BisI GCNGC 5 cut(s) 279, 816, 1330, 1351, 1530
BlsI GCNGC 5 cut(s) 280, 817, 1331, 1352, 1531
Bme18I GGWCC 1 cut(s) 496
BmgT120I GGNCC 1 cut(s) 496
BmiI GGNNCC 5 cut(s) 7, 239, 447, 619, 727
BmsI GCATC 1 cut(s) 56
BoxI GACNNNNGTC 1 cut(s) 488
BpiI GAAGAC 3 cut(s) 266, 359, 1496
BpuEI CTTGAG 2 cut(s) 227, 1382
Bsa29I ATCGAT 1 cut(s) 687
BsaI GGTCTC 1 cut(s) 1394
BsaJI CCNNGG 5 cut(s) 499, 741, 1077, 1095, 1463
BsaWI WCCGGW 4 cut(s) 536, 569, 1334, 1521
Bsc4I CCNNNNNNNGG 3 cut(s) 307, 393, 713
Bse118I RCCGGY 1 cut(s) 1521
Bse1I ACTGG 6 cut(s) 57, 428, 490, 980, 1145, 1181
Bse3DI GCAATG 3 cut(s) 343, 739, 1539
BseCI ATCGAT 1 cut(s) 687
BseDI CCNNGG 5 cut(s) 499, 741, 1077, 1095, 1463
BseGI GGATG 5 cut(s) 635, 727, 1017, 1021, 1112
BseLI CCNNNNNNNGG 3 cut(s) 307, 393, 713
BseMI GCAATG 3 cut(s) 343, 739, 1539
BseNI ACTGG 6 cut(s) 57, 428, 490, 980, 1145, 1181
BseRI GAGGAG 3 cut(s) 229, 356, 424
BseXI GCAGC 5 cut(s) 265, 802, 1316, 1337, 1516
BseYI CCCAGC 1 cut(s) 519
BsgI GTGCAG 2 cut(s) 1092, 1315
BshFI GGCC 1 cut(s) 1448
BshNI GGYRCC 2 cut(s) 617, 725
BshTI ACCGGT 1 cut(s) 1521
BshVI ATCGAT 1 cut(s) 687
BsiHKAI GWGCWC 2 cut(s) 120, 156
BsiSI CCGG 4 cut(s) 537, 570, 1335, 1522
BslFI GGGAC 1 cut(s) 1012
BslI CCNNNNNNNGG 3 cut(s) 307, 393, 713
BsmAI GTCTC 3 cut(s) 1221, 1247, 1394
BsmFI GGGAC 1 cut(s) 1012
BsmI GAATGC 5 cut(s) 420, 433, 524, 1324, 1408
BsnI GGCC 1 cut(s) 1448
Bso31I GGTCTC 1 cut(s) 1394
Bsp1286I GDGCHC 2 cut(s) 120, 156
Bsp143I GATC 1 cut(s) 802
Bsp19I CCATGG 2 cut(s) 1077, 1463
BspACI CCGC 3 cut(s) 1193, 1322, 1406
BspANI GGCC 1 cut(s) 1448
BspDI ATCGAT 1 cut(s) 687
BspLI GGNNCC 5 cut(s) 7, 239, 447, 619, 727
BspMAI CTGCAG 2 cut(s) 136, 1509
BspMI ACCTGC 1 cut(s) 737
BspQI GCTCTTC 1 cut(s) 161
BspT107I GGYRCC 2 cut(s) 617, 725
BspTNI GGTCTC 1 cut(s) 1394
BsrDI GCAATG 3 cut(s) 343, 739, 1539
BsrFI RCCGGY 1 cut(s) 1521
BsrI ACTGG 6 cut(s) 57, 428, 490, 980, 1145, 1181
BssAI RCCGGY 1 cut(s) 1521
BssECI CCNNGG 5 cut(s) 499, 741, 1077, 1095, 1463
BssMI GATC 1 cut(s) 802
BssT1I CCWWGG 5 cut(s) 499, 741, 1077, 1095, 1463
Bst4CI ACNGT 4 cut(s) 401, 617, 800, 1223
Bst6I CTCTTC 5 cut(s) 132, 161, 198, 266, 1430
BstAPI GCANNNNNTGC 2 cut(s) 287, 1073
BstC8I GCNNGC 3 cut(s) 24, 58, 198
BstDSI CCRYGG 2 cut(s) 1077, 1463
BstF5I GGATG 5 cut(s) 635, 727, 1017, 1021, 1112
BstHHI GCGC 1 cut(s) 1539
BstKTI GATC 1 cut(s) 805
BstMAI GTCTC 3 cut(s) 1221, 1247, 1394
BstMBI GATC 1 cut(s) 802
BstMWI GCNNNNNNNGC 8 cut(s) 53, 160, 169, 287, 379, 452, 960, 1073
BstNSI RCATGY 2 cut(s) 60, 1260
BstPAI GACNNNNGTC 1 cut(s) 488
BstSFI CTRYAG 2 cut(s) 132, 1505
BstV1I GCAGC 5 cut(s) 265, 802, 1316, 1337, 1516
BstV2I GAAGAC 3 cut(s) 266, 359, 1496
BstXI CCANNNNNNTGG 1 cut(s) 1509
Bsu15I ATCGAT 1 cut(s) 687
BsuI GTATCC 1 cut(s) 1013
BsuRI GGCC 1 cut(s) 1448
BsuTUI ATCGAT 1 cut(s) 687
BtgI CCRYGG 2 cut(s) 1077, 1463
BtgZI GCGATG 1 cut(s) 978
BtsCI GGATG 5 cut(s) 635, 727, 1017, 1021, 1112
BtsI GCAGTG 2 cut(s) 1502, 1514
BtsIMutI CAGTG 6 cut(s) 50, 435, 1152, 1188, 1502, 1514
BveI ACCTGC 1 cut(s) 737
Cac8I GCNNGC 3 cut(s) 24, 58, 198
CaiI CAGNNNCTG 1 cut(s) 165
CfoI GCGC 1 cut(s) 1539
Cfr10I RCCGGY 1 cut(s) 1521
Cfr13I GGNCC 1 cut(s) 496
ClaI ATCGAT 1 cut(s) 687
Csp6I GTAC 2 cut(s) 618, 726
CspAI ACCGGT 1 cut(s) 1521
CviQI GTAC 2 cut(s) 618, 726
DpnI GATC 1 cut(s) 804
DpnII GATC 1 cut(s) 802
DraI TTTAAA 1 cut(s) 1050
DraIII CACNNNGTG 1 cut(s) 1217
DrdI GACNNNNNNGTC 1 cut(s) 361
DseDI GACNNNNNNGTC 1 cut(s) 361
EaeI YGGCCR 1 cut(s) 1446
Eam1104I CTCTTC 5 cut(s) 132, 161, 198, 266, 1430
EarI CTCTTC 5 cut(s) 132, 161, 198, 266, 1430
Ecl136II GAGCTC 1 cut(s) 154
Eco130I CCWWGG 5 cut(s) 499, 741, 1077, 1095, 1463
Eco24I GRGCYC 1 cut(s) 156
Eco31I GGTCTC 1 cut(s) 1394
Eco47I GGWCC 1 cut(s) 496
Eco53kI GAGCTC 1 cut(s) 154
Eco57I CTGAAG 4 cut(s) 142, 222, 435, 978
EcoICRI GAGCTC 1 cut(s) 154
EcoRI GAATTC 2 cut(s) 988, 1274
EcoT14I CCWWGG 5 cut(s) 499, 741, 1077, 1095, 1463
EcoT22I ATGCAT 1 cut(s) 420
EcoT38I GRGCYC 1 cut(s) 156
ErhI CCWWGG 5 cut(s) 499, 741, 1077, 1095, 1463
FalI AAGNNNNNCTT 2 cut(s) 344, 376
FaqI GGGAC 1 cut(s) 1012
FauI CCCGC 1 cut(s) 1399
Fnu4HI GCNGC 5 cut(s) 279, 816, 1330, 1351, 1530
FokI GGATG 5 cut(s) 642, 734, 1024, 1028, 1099
FriOI GRGCYC 1 cut(s) 156
Fsp4HI GCNGC 5 cut(s) 279, 816, 1330, 1351, 1530
FspBI CTAG 1 cut(s) 1002
GlaI GCGC 1 cut(s) 1538
GluI GCNGC 5 cut(s) 279, 816, 1330, 1351, 1530
GsaI CCCAGC 1 cut(s) 523
HaeIII GGCC 1 cut(s) 1448
HapII CCGG 4 cut(s) 537, 570, 1335, 1522
HhaI GCGC 1 cut(s) 1539
Hin6I GCGC 1 cut(s) 1537
HinP1I GCGC 1 cut(s) 1537
HinfI GANTC 3 cut(s) 552, 885, 1100
HpaII CCGG 4 cut(s) 537, 570, 1335, 1522
HphI GGTGA 5 cut(s) 730, 754, 812, 1143, 1203
Hpy188I TCNGA 4 cut(s) 592, 907, 958, 1317
Hpy188III TCNNGA 4 cut(s) 166, 232, 914, 1399
HpyAV CCTTC 5 cut(s) 459, 542, 953, 1029, 1218
HpyCH4III ACNGT 4 cut(s) 401, 617, 800, 1223
HpyF10VI GCNNNNNNNGC 8 cut(s) 53, 160, 169, 287, 379, 452, 960, 1073
HspAI GCGC 1 cut(s) 1537
KpnI GGTACC 2 cut(s) 621, 729
Kzo9I GATC 1 cut(s) 802
LguI GCTCTTC 1 cut(s) 161
LmnI GCTCC 8 cut(s) 103, 151, 451, 476, 539, 908, 1129, 1464
Lsp1109I GCAGC 5 cut(s) 265, 802, 1316, 1337, 1516
LweI GCATC 1 cut(s) 56
MaeI CTAG 1 cut(s) 1002
MaeIII GTNAC 7 cut(s) 481, 611, 736, 760, 1149, 1183, 1217
MalI GATC 1 cut(s) 804
MboI GATC 1 cut(s) 802
MhlI GDGCHC 2 cut(s) 120, 156
MlsI TGGCCA 1 cut(s) 1448
MluCI AATT 6 cut(s) 15, 226, 700, 988, 1045, 1274
MluNI TGGCCA 1 cut(s) 1448
MlyI GAGTC 1 cut(s) 1109
MmeI TCCRAC 2 cut(s) 892, 930
Mox20I TGGCCA 1 cut(s) 1448
Mph1103I ATGCAT 1 cut(s) 420
MscI TGGCCA 1 cut(s) 1448
MseI TTAA 1 cut(s) 1049
MslI CAYNNNNRTG 4 cut(s) 55, 438, 716, 1507
Msp20I TGGCCA 1 cut(s) 1448
MspI CCGG 4 cut(s) 537, 570, 1335, 1522
Mva1269I GAATGC 5 cut(s) 420, 433, 524, 1324, 1408
MwoI GCNNNNNNNGC 8 cut(s) 53, 160, 169, 287, 379, 452, 960, 1073
NcoI CCATGG 2 cut(s) 1077, 1463
NdeII GATC 1 cut(s) 802
NlaIV GGNNCC 5 cut(s) 7, 239, 447, 619, 727
NmuCI GTSAC 7 cut(s) 481, 611, 736, 760, 1149, 1183, 1217
NsiI ATGCAT 1 cut(s) 420
NspI RCATGY 2 cut(s) 60, 1260
OliI CACNNNNGTG 2 cut(s) 716, 1507
PaeI GCATGC 1 cut(s) 60
PciSI GCTCTTC 1 cut(s) 161
PcsI WCGNNNNNNNCGW 1 cut(s) 621
PctI GAATGC 5 cut(s) 420, 433, 524, 1324, 1408
PfeI GAWTC 2 cut(s) 552, 885
PflMI CCANNNNNTGG 1 cut(s) 307
PinAI ACCGGT 1 cut(s) 1521
PkrI GCNGC 5 cut(s) 280, 817, 1331, 1352, 1531
PleI GAGTC 1 cut(s) 1108
PpsI GAGTC 1 cut(s) 1108
PshAI GACNNNNGTC 1 cut(s) 488
Psp124BI GAGCTC 1 cut(s) 156
PspFI CCCAGC 1 cut(s) 519
PspN4I GGNNCC 5 cut(s) 7, 239, 447, 619, 727
PspPI GGNCC 1 cut(s) 496
PsrI GAACNNNNNNTAC 2 cut(s) 835, 867
PstI CTGCAG 2 cut(s) 136, 1509
PstNI CAGNNNCTG 1 cut(s) 165
RsaI GTAC 2 cut(s) 619, 727
RsaNI GTAC 2 cut(s) 618, 726
RseI CAYNNNNRTG 4 cut(s) 55, 438, 716, 1507
SacI GAGCTC 1 cut(s) 156
SapI GCTCTTC 1 cut(s) 161
SaqAI TTAA 1 cut(s) 1049
SatI GCNGC 5 cut(s) 279, 816, 1330, 1351, 1530
Sau3AI GATC 1 cut(s) 802
Sau96I GGNCC 1 cut(s) 496
SchI GAGTC 1 cut(s) 1109
SduI GDGCHC 2 cut(s) 120, 156
SfaNI GCATC 1 cut(s) 56
SfcI CTRYAG 2 cut(s) 132, 1505
SinI GGWCC 1 cut(s) 496
SmiMI CAYNNNNRTG 4 cut(s) 55, 438, 716, 1507
SmlI CTYRAG 2 cut(s) 242, 1397
SmoI CTYRAG 2 cut(s) 242, 1397
SpeI ACTAGT 1 cut(s) 1001
SphI GCATGC 1 cut(s) 60
Sse9I AATT 6 cut(s) 15, 226, 700, 988, 1045, 1274
SsiI CCGC 3 cut(s) 1193, 1322, 1406
SspMI CTAG 1 cut(s) 1002
SstI GAGCTC 1 cut(s) 156
StyI CCWWGG 5 cut(s) 499, 741, 1077, 1095, 1463
TaaI ACNGT 4 cut(s) 401, 617, 800, 1223
TaqI TCGA 1 cut(s) 687
TasI AATT 6 cut(s) 15, 226, 700, 988, 1045, 1274
TfiI GAWTC 2 cut(s) 552, 885
Tru1I TTAA 1 cut(s) 1049
Tru9I TTAA 1 cut(s) 1049
TscAI CASTG 6 cut(s) 57, 435, 1152, 1188, 1509, 1514
TseFI GTSAC 7 cut(s) 481, 611, 736, 760, 1149, 1183, 1217
TseI GCWGC 5 cut(s) 278, 815, 1329, 1350, 1529
Tsp45I GTSAC 7 cut(s) 481, 611, 736, 760, 1149, 1183, 1217
TspDTI ATGAA 8 cut(s) 28, 126, 426, 435, 792, 981, 1074, 1532
TspRI CASTG 6 cut(s) 57, 435, 1152, 1188, 1509, 1514
Van91I CCANNNNNTGG 1 cut(s) 307
VpaK11BI GGWCC 1 cut(s) 496
XapI RAATTY 3 cut(s) 226, 988, 1274
XceI RCATGY 2 cut(s) 60, 1260
XcmI CCANNNNNNNNNTGG 1 cut(s) 506
XspI CTAG 1 cut(s) 1002
Zsp2I ATGCAT 1 cut(s) 420
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.