Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0006350

Physical Location & Seq

Genomic Coordinates Forward (+)

4932709 .. 4939004

Gene Structure 6296 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g08450.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGGCGGGTCTGATCGATCTGAACAGCACGACGGAGGAGGAGGAGGAGACGCCGTCATCTGGGTCGTCGTCCAATTCGTCTGGCTCAAATGGTTTGATTTCTGGGTCTGTTTGCTTGGAGCTGTGGCACGCCTGTGCTGGGCCACTGATTTCTTTGCCCAAGAAAGGTAGTGTGGTGGTTTATCTTCCACAAGGGCACTTGGAGCAAGTGAGTGATTTTCCAGCCTCGGTTTATGATCTCCCTGCTCATCTGTTTTGCCGAGTTCTGGATGTTAAGCTTCATGCGGAGAGTGGTAGTGATGAAGTGTACGCACAGGTTCAGTTGGTTCCTGAAAGTGAGGAATTTGAGCACAAACTAGGGGAAAGAGAAACTGTTGCAGATGGGGACGAGGATGCTGAGGGTTCAGAGAAATCAACTACACCCCATATGTTCTGCAAAACCCTTACTGCTTCTGATACTAGCACTCATGGGGGCTTCTCTGTCCCTCGCCGTGCTGCTGAGGATTGTTTTCCTCCCCTGGATTACAGTCAACAAAGGCCTTCACAGGAGCTAGTGGCAAAGGATCTGCATGGCCTGGAATGGAGGTTCAGACATATCTATAGGGGGCAGCCACGCAGGCATTTGCTTACCACTGGATGGAGTGCCTTTGTGAACAAGAAGAAGCTCGTTTCTGGAGATGCTGTGTTGTTTCTCAGGGGTGAGGATGGAGAACTGAGACTTGGAGTTAGAAGGGCAGCCCAAGTAAAAGCTTCTGCCACTTATCCAACTCCTGGTAGCCAGCATTTAAACTATAACTCTGTCACAGAGCTGGTGGATGCTATATCTACGAAGACTGCTTTTAACGCCTATTACAATCCAAGAGCCAGCTCATCAGAATTTATAATACCTTTCCGTAAGTTTTTGAGGAGCCTTGGTCATTCCTTCTGTGCTGGAATGAGATTTAAAATGCGCTTTGAAACAGAAGACGCCGCAGAGCAAAGATACACTGGACTGGTAACGGGGATTAGTGAGTTGGATCCCCTAAGATGGCCTGGTTCCAAGTGGAAATGTGTAGCTGTACGGTGGGATGATATAGATACTAGCAAGCAGCATGGCCGGGTTTCCCCATGGGAAATTGAGCCATCTGGTTCTATTTCTAATTCCAGTGGCTTAATGGCATCTGGTCTGAAGAGGTCCAGGATGGGCTTATCTGCAGAAAAGCAAGAATTTCCAGTTCCTCATGGGATTGGAGCCTCAGACTTTGGGGAATCTTTAAGATTCCAGAAGGTCTTGCAAGGTCAAGAAGTTTCGGGTTTTGATACTCCTTTTGGTTCTATAGGGGGTCAAAATCAGCATCCCTCTGAATCGAGGAGAGTCTTTCACGGCTCTATTGGTTCTAGAGGTAATGATCTCAGAAACTCATTTGTGAATTCTGAGATTGCCTCAAAAGGCTTTGGTGAATCTTTCCGATTCCAGAAGGTCTTGCAAGGTCAAGAAATATTTCCAAGCACACCATACGGAAGAGCTCCAGCTACTAATGAGGCTCGTGAATATGGTTGCCCTGGAATCTTTGATGGTTTTCAGGTGCCAAGCTTTAGAAATGGATGGTCTACGATGATGCAGGGCAGTAATACACCTATGCACCGAGCTGCCCCTGTACAGGTGTCATCACCATCATCTGTGCTGATGTTCCAGCAAGCAATAAATGCAGGAGCCGAGTTCAATTCAGTATACAATGGTCATAACCAACAGGAACAGAGAATAATGCAACGCACTCATTCTGAATCAGATGGTGGGAAGCAAACATCAGCCTCGTTCTGTGAACGAAGCTTCACCAGGGAGGGTCATGGTGGCATGAATTCTTTTGATCAACATGGTATTTCACATCCTCCTCTTTTGAGTCAGTCTTCATTGAGAGGCAGTCAAGATATGGTTTCATCATGCAAAAGTAGCTGCAGACTGTTTGGTTTCTCACTGTCTGAGGAAACACATGCCCCAAATAAAGTGGACAACTCCACCTCAGTTACATCTGCATTAGAGTCTGGAGCTTCTATGTTCCCCAATGTTGAACCACGGTTTCATTCAAAGCCGCCTTCGATGTCTGCAGCTGTTGGGATTCCTTGTACCAAAGAATGGGCATTTAACTGGCGTGGAGAAAGGATGGAAAGTTGTTTACAAGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001708 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009850 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010022 GO:0010033 GO:0010050 GO:0010073 GO:0010158 GO:0010468 GO:0010556 GO:0010582 GO:0010817 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0042445 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044464 GO:0045165 GO:0048367 GO:0048507 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0065008 GO:0080090 GO:0090567 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

721

Amino Acids

78.97

Weight (kDa)

6.2

Isoelectric Point (pI)

51.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	144 - 245	2e-23	B3 DNA binding domain
ARF_AD	PF06507	293 - 375	8.5e-33	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006350)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33860 AT2G33860
fragaria_vesca	FvH4_3g08450 FvH4_3g08450 FvH4_3g08450 FvH4_3g08450 FvH4_3g08450 FvH4_3g08450
malus_domestica	MD05G1309400.v1.1 MD10G1287900.v1.1
prunus_persica	Prupe.4G053800_v2.0.a1 Prupe.4G053800_v2.0.a1 Prupe.4G053800_v2.0.a1
pyrus_communis	pycom05g28570 pycom10g24090
rosa_chinensis	RchiOBHm_Chr5g0009381
rosa_laevigata	RLG00000031657
rosa_multiflora	Rmu_sc0002711.1_g000019
rosa_roxburghii	Rroxscaffold_1G00066710 Rroxscaffold_1G00067410
rosa_rugosa	Rorug04G0442500
rosa_samantha	Rh5AG073100 Rh5AG073700 Rh5BG069500 Rh5CG081900 Rh5DG069800
rosa_wichuraiana	Rw5G006830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	881
AccB1I	GGYRCC	1 cut(s)	1564
AccB7I	CCANNNNNTGG	3 cut(s)	636, 770, 2112
AccI	GTMKAC	2 cut(s)	1589, 1710
AciI	CCGC	4 cut(s)	5, 284, 969, 2069
AclWI	GGATC	3 cut(s)	570, 1010, 1023
AcoI	YGGCCR	1 cut(s)	1093
AcsI	RAATTY	5 cut(s)	341, 875, 1205, 1408, 1837
AcuI	CTGAAG	1 cut(s)	1187
AcyI	GRCGYC	2 cut(s)	50, 966
AfaI	GTAC	4 cut(s)	308, 1059, 1638, 2104
AfiI	CCNNNNNNNGG	9 cut(s)	59, 138, 164, 265, 636, 770, 1026, 1639, 2112
AgsI	TTSAA	4 cut(s)	956, 1702, 2048, 2064
AjnI	CCWGG	7 cut(s)	516, 573, 769, 1030, 1175, 1540, 1814
AjuI	GAANNNNNNNTTGG	2 cut(s)	702, 734
AleI	CACNNNNGTG	1 cut(s)	132
AloI	GAACNNNNNNTCC	2 cut(s)	569, 601
Alw21I	GWGCWC	2 cut(s)	351, 1507
Alw26I	GTCTC	2 cut(s)	41, 709
AlwI	GGATC	3 cut(s)	570, 1010, 1023
AoxI	GGCC	5 cut(s)	140, 536, 571, 1028, 1093
ApeKI	GCWGC	7 cut(s)	494, 607, 734, 1087, 1628, 1932, 2084
ApoI	RAATTY	5 cut(s)	341, 875, 1205, 1408, 1837
Asp700I	GAANNNNTTC	1 cut(s)	1479
AspLEI	GCGC	1 cut(s)	951
AspS9I	GGNCC	2 cut(s)	140, 1173
AsuC2I	CCSGG	1 cut(s)	1097
AsuHPI	GGTGA	4 cut(s)	710, 1448, 1641, 1804
AvaII	GGWCC	1 cut(s)	1173
BaeGI	GKGCMC	1 cut(s)	198
BamHI	GGATCC	1 cut(s)	1015
BanI	GGYRCC	1 cut(s)	1564
BanII	GRGCYC	1 cut(s)	1507
BauI	CACGAG	1 cut(s)	1524
BbsI	GAAGAC	3 cut(s)	836, 969, 1878
Bbv12I	GWGCWC	2 cut(s)	351, 1507
BbvCI	CCTCAGC	2 cut(s)	396, 498
BbvI	GCAGC	7 cut(s)	481, 619, 746, 1099, 1615, 1919, 2096
BceAI	ACGGC	3 cut(s)	37, 474, 1378
BciT130I	CCWGG	7 cut(s)	518, 575, 771, 1032, 1177, 1542, 1816
BclI	TGATCA	1 cut(s)	1846
BcnI	CCSGG	1 cut(s)	1097
BcoDI	GTCTC	2 cut(s)	41, 709
BfaI	CTAG	5 cut(s)	356, 459, 551, 1080, 1377
BfmI	CTRYAG	5 cut(s)	598, 1191, 1314, 1933, 2082
BglI	GCCNNNNNGGC	1 cut(s)	616
BisI	GCNGC	9 cut(s)	495, 608, 735, 969, 1088, 1629, 1933, 2069, 2085
BlsI	GCNGC	9 cut(s)	496, 609, 736, 970, 1089, 1630, 1934, 2070, 2086
Bme1390I	CCNGG	8 cut(s)	518, 575, 771, 1032, 1097, 1177, 1542, 1816
Bme18I	GGWCC	1 cut(s)	1173
BmgT120I	GGNCC	2 cut(s)	140, 1173
BmiI	GGNNCC	7 cut(s)	327, 908, 1017, 1036, 1231, 1566, 1693
BmrFI	CCNGG	8 cut(s)	518, 575, 771, 1032, 1097, 1177, 1542, 1816
BmsI	GCATC	6 cut(s)	382, 667, 805, 1166, 1342, 1587
BpiI	GAAGAC	3 cut(s)	836, 969, 1878
BplI	GAGNNNNNCTC	2 cut(s)	1406, 1438
BpmI	CTGGAG	3 cut(s)	693, 1491, 2043
Bpu10I	CCTNAGC	2 cut(s)	396, 498
BpuMI	CCSGG	1 cut(s)	1097
Bsa29I	ATCGAT	1 cut(s)	15
BsaHI	GRCGYC	2 cut(s)	50, 966
BsaJI	CCNNGG	7 cut(s)	225, 516, 910, 1106, 1540, 1815, 2051
BsaXI	ACNNNNNCTCC	6 cut(s)	38, 68, 666, 696, 898, 928
Bsc4I	CCNNNNNNNGG	9 cut(s)	59, 138, 164, 265, 636, 770, 1026, 1639, 2112
Bse1I	ACTGG	6 cut(s)	637, 991, 996, 1143, 1211, 2129
BseBI	CCWGG	7 cut(s)	518, 575, 771, 1032, 1177, 1542, 1816
BseCI	ATCGAT	1 cut(s)	15
BseDI	CCNNGG	7 cut(s)	225, 516, 910, 1106, 1540, 1815, 2051
BseLI	CCNNNNNNNGG	9 cut(s)	59, 138, 164, 265, 636, 770, 1026, 1639, 2112
BseMII	CTCAG	9 cut(s)	387, 489, 704, 706, 1248, 1404, 1405, 1950, 2013
BseNI	ACTGG	6 cut(s)	637, 991, 996, 1143, 1211, 2129
BseRI	GAGGAG	7 cut(s)	50, 53, 56, 59, 919, 1363, 1860
BseSI	GKGCMC	1 cut(s)	198
BseXI	GCAGC	7 cut(s)	481, 619, 746, 1099, 1615, 1919, 2096
BseYI	CCCAGC	1 cut(s)	137
BshFI	GGCC	5 cut(s)	142, 538, 573, 1030, 1095
BshNI	GGYRCC	1 cut(s)	1564
BshVI	ATCGAT	1 cut(s)	15
BsiHKAI	GWGCWC	2 cut(s)	351, 1507
BsiSI	CCGG	1 cut(s)	1096
BslFI	GGGAC	2 cut(s)	398, 467
BslI	CCNNNNNNNGG	9 cut(s)	59, 138, 164, 265, 636, 770, 1026, 1639, 2112
BsmAI	GTCTC	2 cut(s)	41, 709
BsmBI	CGTCTC	1 cut(s)	41
BsmFI	GGGAC	2 cut(s)	398, 467
BsnI	GGCC	5 cut(s)	142, 538, 573, 1030, 1095
Bsp1286I	GDGCHC	3 cut(s)	198, 351, 1507
Bsp1407I	TGTACA	1 cut(s)	1636
Bsp143I	GATC	7 cut(s)	12, 16, 235, 562, 1015, 1387, 1846
Bsp19I	CCATGG	1 cut(s)	1106
BspACI	CCGC	4 cut(s)	5, 284, 969, 2069
BspANI	GGCC	5 cut(s)	142, 538, 573, 1030, 1095
BspCNI	CTCAG	9 cut(s)	388, 490, 705, 705, 1247, 1404, 1405, 1951, 2012
BspDI	ATCGAT	1 cut(s)	15
BspLI	GGNNCC	7 cut(s)	327, 908, 1017, 1036, 1231, 1566, 1693
BspMAI	CTGCAG	3 cut(s)	1195, 1937, 2086
BspPI	GGATC	3 cut(s)	570, 1010, 1023
BspQI	GCTCTTC	1 cut(s)	1495
BspT107I	GGYRCC	1 cut(s)	1564
BsrGI	TGTACA	1 cut(s)	1636
BsrI	ACTGG	6 cut(s)	637, 991, 996, 1143, 1211, 2129
BssECI	CCNNGG	7 cut(s)	225, 516, 910, 1106, 1540, 1815, 2051
BssMI	GATC	7 cut(s)	12, 16, 235, 562, 1015, 1387, 1846
BssNAI	GTATAC	1 cut(s)	1711
BssNI	GRCGYC	2 cut(s)	50, 966
BssSI	CACGAG	1 cut(s)	1524
BssT1I	CCWWGG	2 cut(s)	910, 1106
Bst1107I	GTATAC	1 cut(s)	1711
Bst2BI	CACGAG	1 cut(s)	1524
Bst2UI	CCWGG	7 cut(s)	518, 575, 771, 1032, 1177, 1542, 1816
Bst4CI	ACNGT	6 cut(s)	373, 527, 1062, 1941, 1956, 2055
Bst6I	CTCTTC	2 cut(s)	1163, 1495
BstACI	GRCGYC	2 cut(s)	50, 966
BstAPI	GCANNNNNTGC	1 cut(s)	1685
BstAUI	TGTACA	1 cut(s)	1636
BstC8I	GCNNGC	6 cut(s)	129, 617, 779, 865, 1085, 1677
BstDSI	CCRYGG	2 cut(s)	1106, 2051
BstHHI	GCGC	1 cut(s)	951
BstKTI	GATC	7 cut(s)	15, 19, 238, 565, 1018, 1390, 1849
BstMAI	GTCTC	2 cut(s)	41, 709
BstMBI	GATC	7 cut(s)	12, 16, 235, 562, 1015, 1387, 1846
BstMWI	GCNNNNNNNGC	5 cut(s)	202, 616, 842, 1685, 1929
BstNI	CCWGG	7 cut(s)	518, 575, 771, 1032, 1177, 1542, 1816
BstNSI	RCATGY	1 cut(s)	1973
BstSCI	CCNGG	8 cut(s)	516, 573, 769, 1030, 1095, 1175, 1540, 1814
BstSFI	CTRYAG	5 cut(s)	598, 1191, 1314, 1933, 2082
BstSLI	GKGCMC	1 cut(s)	198
BstV1I	GCAGC	7 cut(s)	481, 619, 746, 1099, 1615, 1919, 2096
BstV2I	GAAGAC	3 cut(s)	836, 969, 1878
BstX2I	RGATCY	2 cut(s)	562, 1015
BstYI	RGATCY	2 cut(s)	562, 1015
BstZ17I	GTATAC	1 cut(s)	1711
Bsu15I	ATCGAT	1 cut(s)	15
BsuRI	GGCC	5 cut(s)	142, 538, 573, 1030, 1095
BsuTUI	ATCGAT	1 cut(s)	15
BtgI	CCRYGG	2 cut(s)	1106, 2051
BtsIMutI	CAGTG	5 cut(s)	143, 630, 984, 1150, 1952
Cac8I	GCNNGC	6 cut(s)	129, 617, 779, 865, 1085, 1677
CfoI	GCGC	1 cut(s)	951
Cfr13I	GGNCC	2 cut(s)	140, 1173
ClaI	ATCGAT	1 cut(s)	15
CseI	GACGC	2 cut(s)	58, 974
Csp6I	GTAC	4 cut(s)	307, 1058, 1637, 2103
CspCI	CAANNNNNGTGG	2 cut(s)	1965, 2000
CviQI	GTAC	4 cut(s)	307, 1058, 1637, 2103
DpnI	GATC	7 cut(s)	14, 18, 237, 564, 1017, 1389, 1848
DpnII	GATC	7 cut(s)	12, 16, 235, 562, 1015, 1387, 1846
DraI	TTTAAA	2 cut(s)	786, 943
EaeI	YGGCCR	1 cut(s)	1093
Eam1104I	CTCTTC	2 cut(s)	1163, 1495
EarI	CTCTTC	2 cut(s)	1163, 1495
Ecl136II	GAGCTC	1 cut(s)	1505
Eco130I	CCWWGG	2 cut(s)	910, 1106
Eco147I	AGGCCT	1 cut(s)	538
Eco24I	GRGCYC	1 cut(s)	1507
Eco47I	GGWCC	1 cut(s)	1173
Eco53kI	GAGCTC	1 cut(s)	1505
Eco57I	CTGAAG	1 cut(s)	1187
EcoICRI	GAGCTC	1 cut(s)	1505
EcoRI	GAATTC	2 cut(s)	1408, 1837
EcoRII	CCWGG	7 cut(s)	516, 573, 769, 1030, 1175, 1540, 1814
EcoT14I	CCWWGG	2 cut(s)	910, 1106
EcoT38I	GRGCYC	1 cut(s)	1507
ErhI	CCWWGG	2 cut(s)	910, 1106
Esp3I	CGTCTC	1 cut(s)	41
FaqI	GGGAC	2 cut(s)	398, 467
FauNDI	CATATG	1 cut(s)	426
FbaI	TGATCA	1 cut(s)	1846
FblI	GTMKAC	2 cut(s)	1589, 1710
Fnu4HI	GCNGC	9 cut(s)	495, 608, 735, 969, 1088, 1629, 1933, 2069, 2085
FriOI	GRGCYC	1 cut(s)	1507
Fsp4HI	GCNGC	9 cut(s)	495, 608, 735, 969, 1088, 1629, 1933, 2069, 2085
FspBI	CTAG	5 cut(s)	356, 459, 551, 1080, 1377
GlaI	GCGC	1 cut(s)	950
GluI	GCNGC	9 cut(s)	495, 608, 735, 969, 1088, 1629, 1933, 2069, 2085
GsaI	CCCAGC	1 cut(s)	141
GsuI	CTGGAG	3 cut(s)	693, 1491, 2043
HaeIII	GGCC	5 cut(s)	142, 538, 573, 1030, 1095
HapII	CCGG	1 cut(s)	1096
HgaI	GACGC	2 cut(s)	58, 974
HhaI	GCGC	1 cut(s)	951
Hin1I	GRCGYC	2 cut(s)	50, 966
Hin6I	GCGC	1 cut(s)	949
HinP1I	GCGC	1 cut(s)	949
HincII	GTYRAC	1 cut(s)	530
HindII	GTYRAC	1 cut(s)	530
HindIII	AAGCTT	4 cut(s)	275, 747, 1570, 1807
HpaII	CCGG	1 cut(s)	1096
HphI	GGTGA	4 cut(s)	710, 1448, 1641, 1804
Hpy166II	GTNNAC	8 cut(s)	307, 530, 652, 1590, 1711, 1802, 1987, 2153
Hpy8I	GTNNAC	8 cut(s)	307, 530, 652, 1590, 1711, 1802, 1987, 2153
Hpy99I	CGWCG	2 cut(s)	34, 70
HpyAV	CCTTC	6 cut(s)	549, 723, 931, 1258, 1450, 2082
HpyCH4III	ACNGT	6 cut(s)	373, 527, 1062, 1941, 1956, 2055
HpyF10VI	GCNNNNNNNGC	5 cut(s)	202, 616, 842, 1685, 1929
Hsp92I	GRCGYC	2 cut(s)	50, 966
HspAI	GCGC	1 cut(s)	949
Ksp22I	TGATCA	1 cut(s)	1846
Kzo9I	GATC	7 cut(s)	12, 16, 235, 562, 1015, 1387, 1846
LguI	GCTCTTC	1 cut(s)	1495
LmnI	GCTCC	8 cut(s)	118, 202, 547, 906, 1229, 1510, 1691, 2024
Lsp1109I	GCAGC	7 cut(s)	481, 619, 746, 1099, 1615, 1919, 2096
LweI	GCATC	6 cut(s)	382, 667, 805, 1166, 1342, 1587
MaeI	CTAG	5 cut(s)	356, 459, 551, 1080, 1377
MaeIII	GTNAC	3 cut(s)	799, 994, 2002
MalI	GATC	7 cut(s)	14, 18, 237, 564, 1017, 1389, 1848
MboI	GATC	7 cut(s)	12, 16, 235, 562, 1015, 1387, 1846
MboII	GAAGA	7 cut(s)	176, 670, 841, 974, 1180, 1512, 1878
MflI	RGATCY	2 cut(s)	562, 1015
MhlI	GDGCHC	3 cut(s)	198, 351, 1507
MluCI	AATT	9 cut(s)	73, 341, 875, 1113, 1138, 1205, 1408, 1702, 1837
MlyI	GAGTC	3 cut(s)	1362, 1888, 2027
MmeI	TCCRAC	2 cut(s)	788, 993
MroXI	GAANNNNTTC	1 cut(s)	1479
MseI	TTAA	7 cut(s)	273, 785, 840, 942, 1151, 1253, 2121
MslI	CAYNNNNRTG	1 cut(s)	132
MspA1I	CMGCKG	1 cut(s)	2087
MspI	CCGG	1 cut(s)	1096
MspR9I	CCNGG	8 cut(s)	518, 575, 771, 1032, 1097, 1177, 1542, 1816
MvaI	CCWGG	7 cut(s)	518, 575, 771, 1032, 1177, 1542, 1816
MwoI	GCNNNNNNNGC	5 cut(s)	202, 616, 842, 1685, 1929
NciI	CCSGG	1 cut(s)	1097
NcoI	CCATGG	1 cut(s)	1106
NdeI	CATATG	1 cut(s)	426
NdeII	GATC	7 cut(s)	12, 16, 235, 562, 1015, 1387, 1846
NlaIV	GGNNCC	7 cut(s)	327, 908, 1017, 1036, 1231, 1566, 1693
NmeAIII	GCCGAG	2 cut(s)	284, 1720
NmuCI	GTSAC	1 cut(s)	799
NspI	RCATGY	1 cut(s)	1973
OliI	CACNNNNGTG	1 cut(s)	132
PceI	AGGCCT	1 cut(s)	538
PciSI	GCTCTTC	1 cut(s)	1495
PcsI	WCGNNNNNNNCGW	1 cut(s)	74
PdmI	GAANNNNTTC	1 cut(s)	1479
PfeI	GAWTC	8 cut(s)	1247, 1257, 1343, 1439, 1449, 1545, 1763, 2095
PflFI	GACNNNGTC	1 cut(s)	52
PflMI	CCANNNNNTGG	3 cut(s)	636, 770, 2112
PfoI	TCCNGGA	1 cut(s)	1175
PkrI	GCNGC	9 cut(s)	496, 609, 736, 970, 1089, 1630, 1934, 2070, 2086
PleI	GAGTC	3 cut(s)	1361, 1887, 2026
PpsI	GAGTC	3 cut(s)	1361, 1887, 2026
PsiI	TTATAA	1 cut(s)	881
Psp124BI	GAGCTC	1 cut(s)	1507
Psp6I	CCWGG	7 cut(s)	516, 573, 769, 1030, 1175, 1540, 1814
PspFI	CCCAGC	1 cut(s)	137
PspGI	CCWGG	7 cut(s)	516, 573, 769, 1030, 1175, 1540, 1814
PspN4I	GGNNCC	7 cut(s)	327, 908, 1017, 1036, 1231, 1566, 1693
PspPI	GGNCC	2 cut(s)	140, 1173
PstI	CTGCAG	3 cut(s)	1195, 1937, 2086
PsuI	RGATCY	2 cut(s)	562, 1015
PsyI	GACNNNGTC	1 cut(s)	52
PvuII	CAGCTG	1 cut(s)	2087
RsaI	GTAC	4 cut(s)	308, 1059, 1638, 2104
RsaNI	GTAC	4 cut(s)	307, 1058, 1637, 2103
RseI	CAYNNNNRTG	1 cut(s)	132
SacI	GAGCTC	1 cut(s)	1507
SapI	GCTCTTC	1 cut(s)	1495
SaqAI	TTAA	7 cut(s)	273, 785, 840, 942, 1151, 1253, 2121
SatI	GCNGC	9 cut(s)	495, 608, 735, 969, 1088, 1629, 1933, 2069, 2085
Sau3AI	GATC	7 cut(s)	12, 16, 235, 562, 1015, 1387, 1846
Sau96I	GGNCC	2 cut(s)	140, 1173
SchI	GAGTC	3 cut(s)	1362, 1888, 2027
ScrFI	CCNGG	8 cut(s)	518, 575, 771, 1032, 1097, 1177, 1542, 1816
SduI	GDGCHC	3 cut(s)	198, 351, 1507
SfaNI	GCATC	6 cut(s)	382, 667, 805, 1166, 1342, 1587
SfcI	CTRYAG	5 cut(s)	598, 1191, 1314, 1933, 2082
SinI	GGWCC	1 cut(s)	1173
SmiMI	CAYNNNNRTG	1 cut(s)	132
Sse9I	AATT	9 cut(s)	73, 341, 875, 1113, 1138, 1205, 1408, 1702, 1837
SseBI	AGGCCT	1 cut(s)	538
SsiI	CCGC	4 cut(s)	5, 284, 969, 2069
SspI	AATATT	1 cut(s)	1479
SspMI	CTAG	5 cut(s)	356, 459, 551, 1080, 1377
SstI	GAGCTC	1 cut(s)	1507
StuI	AGGCCT	1 cut(s)	538
StyD4I	CCNGG	8 cut(s)	516, 573, 769, 1030, 1095, 1175, 1540, 1814
StyI	CCWWGG	2 cut(s)	910, 1106
TaaI	ACNGT	6 cut(s)	373, 527, 1062, 1941, 1956, 2055
TaqI	TCGA	3 cut(s)	15, 1346, 2075
TasI	AATT	9 cut(s)	73, 341, 875, 1113, 1138, 1205, 1408, 1702, 1837
TatI	WGTACW	1 cut(s)	1636
TauI	GCSGC	2 cut(s)	971, 2071
TfiI	GAWTC	8 cut(s)	1247, 1257, 1343, 1439, 1449, 1545, 1763, 2095
Tru1I	TTAA	7 cut(s)	273, 785, 840, 942, 1151, 1253, 2121
Tru9I	TTAA	7 cut(s)	273, 785, 840, 942, 1151, 1253, 2121
TscAI	CASTG	5 cut(s)	150, 637, 991, 1150, 1959
TseFI	GTSAC	1 cut(s)	799
TseI	GCWGC	7 cut(s)	494, 607, 734, 1087, 1628, 1932, 2084
Tsp45I	GTSAC	1 cut(s)	799
TspDTI	ATGAA	6 cut(s)	269, 315, 1850, 1878, 1905, 2048
TspGWI	ACGGA	3 cut(s)	47, 881, 1512
TspRI	CASTG	5 cut(s)	150, 637, 991, 1150, 1959
Tth111I	GACNNNGTC	1 cut(s)	52
Van91I	CCANNNNNTGG	3 cut(s)	636, 770, 2112
VpaK11BI	GGWCC	1 cut(s)	1173
XapI	RAATTY	5 cut(s)	341, 875, 1205, 1408, 1837
XbaI	TCTAGA	1 cut(s)	1376
XceI	RCATGY	1 cut(s)	1973
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1150
XmiI	GTMKAC	2 cut(s)	1589, 1710
XmnI	GAANNNNTTC	1 cut(s)	1479
XspI	CTAG	5 cut(s)	356, 459, 551, 1080, 1377

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.