Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0006350

Physical Location & Seq

Genomic Coordinates Forward (+)

29231706 .. 29235758

Gene Structure 4053 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g28570.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGGCGGGTCTAATTGATCTGAACAGTGCGACTGAGGACGAACAAACGCCATCGTCCGGCTCGCCGTCTTCGGCTTCCTCTGTTTCCGACGCTCTGGGTTCGTCCGCGTCGGTGTGCATGGAGCTCTGGCACGCCTGCGCTGGCCCACTGATTTCGCTGCCGAAGAAAGGGAGTGTGGTGGTGTATCTGCCGCAGGGCCACCTGGAGCAAGTCTCGGATTTTCCGACCTCGGCTTATGATCTCCCGCCCCACCTCTTCTGTCGGGTTGTCGATGTCAAGCTCCATGCTGAGACTGGCACTGACGATGTCTTCGCTCGGGTTTCCCTTGTTCCTGAAAGTGAGGAAATTGAGCACAGATTGCGGGAAGGGGAAACCGATGCAGATGCCGAGGACGACGTTGAGGCAATGGGGACGTCAGCCACACCCCACATGTTCTGCAAAACCCTTACTGCTTCCGATACTAGCACTCACGGAGGCTTCTCTGTGCCTCGTCGTGCTGCCGAGGATTGCTTTCCTCCCCTGGATTACACTCAACAAAGGCCTTCGCAAGAGCTTGTAGCAAAGGATCTGCATGGCCTGGAGTGGAGGTTCCGACATATCTATAGGGGGCAGCCACGGAGGCATTTGCTCACCACTGGGTGGAGTGCGTTTGTGAACAAGAAGAAGCTCGTCTCTGGAGATGCAGTGCTGTTTCTTAGGGGTGACGATGGAGAACTGAGGCTCGGAATTAGAAGGGCAGCCCAGTTTAAAAGTTCTGCTACTTGTCCAACTCTTTGTAGCCAGCAATTGAACTGTAGCGCTATCACCGATGTGTTGAATGCGATATTCGCGAAGAATGCTTTTAATGTGTACTACAATCCAAGGTCCAGCTCTTCTGAATTCATAATACCTTCCCATAAGTTTTTGAGGAGCCTAGATCATTGTTTTTCTGCTGGAATGAGGATCAAAATGCGTTTCGAAACTGAAGATGCAGCAGAGCGAAGATACATTGGGTTTATAACGCGGATTAGTGAATTGGATCCTGTAAGATGGCCTGGTTCAAAATGGAGATGCCTAGTTGTCAGGTGGGATGATATAGACACAAGTAAGCACAGCAGGGTTTCCCCATGGGAAGTTGAGCCATCTGGTTCTGTTTCTAGTTCCCATACCCTAATGGCAACTGGCTTGAAGCGGTCCAGGATTGGTTTGTCTGCAACAAAACCAGAATGTTCAGTTCCTAATGGTGGGATTGGAACATCAGACTTTGGGGAATCTTTAAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTCGGGGTTTGATACTCCTTTCAGTGGTTTAGGTGGTCTGAATTCGCTTCCATCTGAAGCAAGGAGAGTCTTCCACGGTTCCGGTGGTTCTGGGATTGCTGCTGGAGGTAATGGTCTCAGACAGTCACTTGTGGATTCTGAGATTGCCTCAAAAGGCATAGGCTTTGGTGAATCATTCCGATTCCGTAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCTCACCATATGGAAGAGCTCCTGCTTCTAACGAAGCTCATGAATATGGTGGACCTGGAATCTATGATGGTTTTCATGTGCCTGGCTTTAGGAATGGATGGTCCACCATGATGCAGAGCAATAATACACATGTGCACTCATCTGCCCCATCTGTGCAAGTTTCATCACCATCGTCTGTGTTAATGTTCCAGCAAGCAGTGAATCCAGTTGTGGAATTCAACTCGGTATACAATGGCCATAACCCAGAGGACCATAGAGTAAATCGGACTCTACATGTCTCTGAACATGATGGTGGAAGGCAAACATCATCCTCGTTTGGTGAACTTAACTTCAGCAGGGAAGATCGTGGAGGCACGCATTCTTACAATCAGCATGGTATTTCACCTCATCCAGGTACAAGTCAATCAACAATTAGTGGCAGCCAGGATTCTATTTCACCAATCAAAGGTAGCTGTAGACTCTTTGGTTTCTCATTGTCCGAGGACAAATGTGTCCCGGATCAAGAGGGCAACCCCAATGTTGGTGTGCGGTTCCATTCAAAGCCTTCTTTGATGACTTCAACAGTTGGAATAACCTGTACTAAAGATTGGGCTTTTGACTGGCGCGGAGAAAGGATGGAAAGCTGTTTACAAGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001708 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009850 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010022 GO:0010033 GO:0010050 GO:0010073 GO:0010158 GO:0010468 GO:0010556 GO:0010582 GO:0010817 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0042445 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044464 GO:0045165 GO:0048367 GO:0048507 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0065008 GO:0080090 GO:0090567 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

715

Amino Acids

77.8

Weight (kDa)

6.2

Isoelectric Point (pI)

52.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006350)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33860 AT2G33860
fragaria_vesca	FvH4_3g08450 FvH4_3g08450 FvH4_3g08450 FvH4_3g08450 FvH4_3g08450 FvH4_3g08450
malus_domestica	MD05G1309400.v1.1 MD10G1287900.v1.1
prunus_persica	Prupe.4G053800_v2.0.a1 Prupe.4G053800_v2.0.a1 Prupe.4G053800_v2.0.a1
pyrus_communis	pycom05g28570 pycom10g24090
rosa_chinensis	RchiOBHm_Chr5g0009381
rosa_laevigata	RLG00000031657
rosa_multiflora	Rmu_sc0002711.1_g000019
rosa_roxburghii	Rroxscaffold_1G00066710 Rroxscaffold_1G00067410
rosa_rugosa	Rorug04G0442500
rosa_samantha	Rh5AG073100 Rh5AG073700 Rh5BG069500 Rh5CG081900 Rh5DG069800
rosa_wichuraiana	Rw5G006830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	998
AasI	GACNNNNNNGTC	1 cut(s)	1997
AatII	GACGTC	1 cut(s)	416
AccB7I	CCANNNNNTGG	1 cut(s)	639
AccI	GTMKAC	2 cut(s)	1734, 1963
AccII	CGCG	4 cut(s)	107, 830, 1003, 2112
AciI	CCGC	9 cut(s)	5, 105, 191, 245, 361, 1003, 1171, 2035, 2112
AclWI	GGATC	5 cut(s)	573, 950, 1013, 1026, 2013
AcoI	YGGCCR	1 cut(s)	1741
AcsI	RAATTY	4 cut(s)	878, 1287, 1330, 1721
AcuI	CTGAAG	3 cut(s)	984, 1365, 1822
AcyI	GRCGYC	1 cut(s)	413
AdeI	CACNNNGTG	1 cut(s)	639
AfaI	GTAC	3 cut(s)	851, 1903, 2086
AfeI	AGCGCT	1 cut(s)	799
AfiI	CCNNNNNNNGG	8 cut(s)	56, 167, 639, 1223, 1313, 1898, 1952, 2027
AflIII	ACRYGT	3 cut(s)	429, 1636, 1780
AgsI	TTSAA	7 cut(s)	790, 817, 1041, 1168, 1726, 2046, 2067
AjnI	CCWGG	9 cut(s)	201, 519, 576, 1033, 1175, 1561, 1588, 1897, 1929
AleI	CACNNNNGTG	1 cut(s)	809
AloI	GAACNNNNNNTCC	2 cut(s)	572, 604
Alw21I	GWGCWC	4 cut(s)	126, 354, 1528, 1644
Alw26I	GTCTC	5 cut(s)	217, 284, 676, 1409, 1789
Alw44I	GTGCAC	1 cut(s)	1640
AlwI	GGATC	5 cut(s)	573, 950, 1013, 1026, 2013
Ama87I	CYCGRG	1 cut(s)	315
Aor51HI	AGCGCT	1 cut(s)	799
AoxI	GGCC	6 cut(s)	142, 196, 539, 574, 1031, 1741
ApaLI	GTGCAC	1 cut(s)	1640
ApeKI	GCWGC	7 cut(s)	157, 497, 610, 737, 971, 1388, 1926
ApoI	RAATTY	4 cut(s)	878, 1287, 1330, 1721
ArsI	GACNNNNNNTTYG	2 cut(s)	293, 325
Asp700I	GAANNNNTTC	1 cut(s)	1500
AspLEI	GCGC	3 cut(s)	140, 800, 2112
AspS9I	GGNCC	7 cut(s)	143, 196, 864, 1173, 1559, 1608, 1756
AsuC2I	CCSGG	1 cut(s)	2003
AsuHPI	GGTGA	9 cut(s)	622, 713, 796, 1469, 1503, 1665, 1838, 1881, 1935
AsuII	TTCGAA	1 cut(s)	957
AvaI	CYCGRG	1 cut(s)	315
AvaII	GGWCC	5 cut(s)	864, 1173, 1559, 1608, 1756
BaeGI	GKGCMC	1 cut(s)	1644
BalI	TGGCCA	1 cut(s)	1743
BamHI	GGATCC	1 cut(s)	1018
BanII	GRGCYC	2 cut(s)	126, 1528
BbsI	GAAGAC	3 cut(s)	60, 301, 1351
Bbv12I	GWGCWC	4 cut(s)	126, 354, 1528, 1644
BbvI	GCAGC	7 cut(s)	144, 484, 622, 749, 983, 1375, 1938
BceAI	ACGGC	1 cut(s)	49
BcgI	CGANNNNNNTGC	2 cut(s)	365, 399
BciT130I	CCWGG	9 cut(s)	203, 521, 578, 1035, 1177, 1563, 1590, 1899, 1931
BcnI	CCSGG	1 cut(s)	2003
BcoDI	GTCTC	5 cut(s)	217, 284, 676, 1409, 1789
BfaI	CTAG	4 cut(s)	462, 914, 1055, 1137
BfmI	CTRYAG	3 cut(s)	601, 793, 1960
BfoI	RGCGCY	1 cut(s)	801
BglI	GCCNNNNNGGC	1 cut(s)	619
BisI	GCNGC	8 cut(s)	158, 191, 498, 611, 738, 972, 1389, 1927
BlsI	GCNGC	8 cut(s)	159, 192, 499, 612, 739, 973, 1390, 1928
Bme18I	GGWCC	5 cut(s)	864, 1173, 1559, 1608, 1756
BmeT110I	CYCGRG	1 cut(s)	315
BmgT120I	GGNCC	7 cut(s)	143, 196, 864, 1173, 1559, 1608, 1756
BmiI	GGNNCC	6 cut(s)	590, 911, 1020, 1262, 1369, 2039
BmrI	ACTGGG	2 cut(s)	645, 736
BmsI	GCATC	6 cut(s)	367, 373, 670, 958, 1040, 1608
BmuI	ACTGGG	2 cut(s)	645, 736
BpiI	GAAGAC	3 cut(s)	60, 301, 1351
BplI	GAGNNNNNCTC	4 cut(s)	197, 229, 1421, 1453
BpmI	CTGGAG	4 cut(s)	224, 599, 696, 1413
Bpu14I	TTCGAA	1 cut(s)	957
BpuMI	CCSGG	1 cut(s)	2003
BsaHI	GRCGYC	1 cut(s)	413
BsaI	GGTCTC	1 cut(s)	1409
BsaJI	CCNNGG	9 cut(s)	228, 387, 501, 519, 614, 860, 1106, 1363, 1986
BsaWI	WCCGGW	1 cut(s)	1370
BsaXI	ACNNNNNCTCC	4 cut(s)	572, 602, 669, 699
Bsc4I	CCNNNNNNNGG	8 cut(s)	56, 167, 639, 1223, 1313, 1898, 1952, 2027
Bse1I	ACTGG	6 cut(s)	298, 640, 742, 1165, 1712, 2111
Bse3DI	GCAATG	1 cut(s)	411
BseBI	CCWGG	9 cut(s)	203, 521, 578, 1035, 1177, 1563, 1590, 1899, 1931
BseDI	CCNNGG	9 cut(s)	228, 387, 501, 519, 614, 860, 1106, 1363, 1986
BseGI	GGATG	5 cut(s)	1075, 1610, 1814, 1894, 2127
BseLI	CCNNNNNNNGG	8 cut(s)	56, 167, 639, 1223, 1313, 1898, 1952, 2027
BseMI	GCAATG	1 cut(s)	411
BseMII	CTCAG	5 cut(s)	24, 279, 707, 1419, 1420
BseNI	ACTGG	6 cut(s)	298, 640, 742, 1165, 1712, 2111
BseRI	GAGGAG	1 cut(s)	922
BseSI	GKGCMC	1 cut(s)	1644
BseXI	GCAGC	7 cut(s)	144, 484, 622, 749, 983, 1375, 1938
Bsh1236I	CGCG	4 cut(s)	107, 830, 1003, 2112
BshFI	GGCC	6 cut(s)	144, 198, 541, 576, 1033, 1743
BsiHKAI	GWGCWC	4 cut(s)	126, 354, 1528, 1644
BsiHKCI	CYCGRG	1 cut(s)	315
BsiSI	CCGG	3 cut(s)	57, 1371, 2003
BslFI	GGGAC	2 cut(s)	424, 1985
BslI	CCNNNNNNNGG	8 cut(s)	56, 167, 639, 1223, 1313, 1898, 1952, 2027
BsmAI	GTCTC	5 cut(s)	217, 284, 676, 1409, 1789
BsmBI	CGTCTC	1 cut(s)	676
BsmFI	GGGAC	2 cut(s)	424, 1985
BsmI	GAATGC	3 cut(s)	823, 841, 1864
BsnI	GGCC	6 cut(s)	144, 198, 541, 576, 1033, 1743
Bso31I	GGTCTC	1 cut(s)	1409
BsoBI	CYCGRG	1 cut(s)	315
Bsp119I	TTCGAA	1 cut(s)	957
Bsp1286I	GDGCHC	4 cut(s)	126, 354, 1528, 1644
Bsp143I	GATC	8 cut(s)	16, 238, 565, 916, 942, 1018, 1849, 2005
Bsp19I	CCATGG	1 cut(s)	1106
Bsp68I	TCGCGA	1 cut(s)	830
BspACI	CCGC	9 cut(s)	5, 105, 191, 245, 361, 1003, 1171, 2035, 2112
BspANI	GGCC	6 cut(s)	144, 198, 541, 576, 1033, 1743
BspCNI	CTCAG	5 cut(s)	25, 280, 708, 1419, 1420
BspFNI	CGCG	4 cut(s)	107, 830, 1003, 2112
BspHI	TCATGA	1 cut(s)	1546
BspLI	GGNNCC	6 cut(s)	590, 911, 1020, 1262, 1369, 2039
BspPI	GGATC	5 cut(s)	573, 950, 1013, 1026, 2013
BspQI	GCTCTTC	2 cut(s)	877, 1516
BspT104I	TTCGAA	1 cut(s)	957
BspTNI	GGTCTC	1 cut(s)	1409
BsrDI	GCAATG	1 cut(s)	411
BsrI	ACTGG	6 cut(s)	298, 640, 742, 1165, 1712, 2111
BssECI	CCNNGG	9 cut(s)	228, 387, 501, 519, 614, 860, 1106, 1363, 1986
BssMI	GATC	8 cut(s)	16, 238, 565, 916, 942, 1018, 1849, 2005
BssNAI	GTATAC	1 cut(s)	1735
BssNI	GRCGYC	1 cut(s)	413
BssT1I	CCWWGG	2 cut(s)	860, 1106
Bst1107I	GTATAC	1 cut(s)	1735
Bst2UI	CCWGG	9 cut(s)	203, 521, 578, 1035, 1177, 1563, 1590, 1899, 1931
Bst4CI	ACNGT	5 cut(s)	26, 794, 1367, 1413, 2071
Bst6I	CTCTTC	3 cut(s)	260, 877, 1516
BstACI	GRCGYC	1 cut(s)	413
BstAPI	GCANNNNNTGC	1 cut(s)	358
BstBI	TTCGAA	1 cut(s)	957
BstC8I	GCNNGC	7 cut(s)	62, 132, 136, 142, 782, 1701, 1862
BstDEI	CTNAG	6 cut(s)	33, 288, 695, 716, 1406, 1428
BstDSI	CCRYGG	3 cut(s)	614, 1106, 1363
BstENI	CCTNNNNNAGG	1 cut(s)	1896
BstF5I	GGATG	5 cut(s)	1075, 1610, 1814, 1894, 2127
BstFNI	CGCG	4 cut(s)	107, 830, 1003, 2112
BstH2I	RGCGCY	1 cut(s)	801
BstHHI	GCGC	3 cut(s)	140, 800, 2112
BstKTI	GATC	8 cut(s)	19, 241, 568, 919, 945, 1021, 1852, 2008
BstMAI	GTCTC	5 cut(s)	217, 284, 676, 1409, 1789
BstMBI	GATC	8 cut(s)	16, 238, 565, 916, 942, 1018, 1849, 2005
BstMWI	GCNNNNNNNGC	4 cut(s)	358, 619, 827, 836
BstNI	CCWGG	9 cut(s)	203, 521, 578, 1035, 1177, 1563, 1590, 1899, 1931
BstNSI	RCATGY	3 cut(s)	433, 1640, 1784
BstSFI	CTRYAG	3 cut(s)	601, 793, 1960
BstSLI	GKGCMC	1 cut(s)	1644
BstUI	CGCG	4 cut(s)	107, 830, 1003, 2112
BstV1I	GCAGC	7 cut(s)	144, 484, 622, 749, 983, 1375, 1938
BstV2I	GAAGAC	3 cut(s)	60, 301, 1351
BstX2I	RGATCY	2 cut(s)	565, 1018
BstYI	RGATCY	2 cut(s)	565, 1018
BstZ17I	GTATAC	1 cut(s)	1735
BsuRI	GGCC	6 cut(s)	144, 198, 541, 576, 1033, 1743
BtgI	CCRYGG	3 cut(s)	614, 1106, 1363
BtsCI	GGATG	5 cut(s)	1075, 1610, 1814, 1894, 2127
BtsI	GCAGTG	2 cut(s)	690, 1710
BtsIMutI	CAGTG	7 cut(s)	31, 146, 297, 633, 690, 1318, 1710
BtuMI	TCGCGA	1 cut(s)	830
Cac8I	GCNNGC	7 cut(s)	62, 132, 136, 142, 782, 1701, 1862
CciI	TCATGA	1 cut(s)	1546
CfoI	GCGC	3 cut(s)	140, 800, 2112
Cfr13I	GGNCC	7 cut(s)	143, 196, 864, 1173, 1559, 1608, 1756
CseI	GACGC	2 cut(s)	96, 98
Csp6I	GTAC	3 cut(s)	850, 1902, 2085
CviQI	GTAC	3 cut(s)	850, 1902, 2085
DdeI	CTNAG	6 cut(s)	33, 288, 695, 716, 1406, 1428
DpnI	GATC	8 cut(s)	18, 240, 567, 918, 944, 1020, 1851, 2007
DpnII	GATC	8 cut(s)	16, 238, 565, 916, 942, 1018, 1849, 2005
DraI	TTTAAA	1 cut(s)	748
DraIII	CACNNNGTG	1 cut(s)	639
DrdI	GACNNNNNNGTC	1 cut(s)	1997
DseDI	GACNNNNNNGTC	1 cut(s)	1997
EaeI	YGGCCR	1 cut(s)	1741
Eam1104I	CTCTTC	3 cut(s)	260, 877, 1516
EarI	CTCTTC	3 cut(s)	260, 877, 1516
Ecl136II	GAGCTC	2 cut(s)	124, 1526
Eco130I	CCWWGG	2 cut(s)	860, 1106
Eco147I	AGGCCT	1 cut(s)	541
Eco24I	GRGCYC	2 cut(s)	126, 1528
Eco31I	GGTCTC	1 cut(s)	1409
Eco47I	GGWCC	5 cut(s)	864, 1173, 1559, 1608, 1756
Eco47III	AGCGCT	1 cut(s)	799
Eco53kI	GAGCTC	2 cut(s)	124, 1526
Eco57I	CTGAAG	3 cut(s)	984, 1365, 1822
Eco88I	CYCGRG	1 cut(s)	315
EcoICRI	GAGCTC	2 cut(s)	124, 1526
EcoNI	CCTNNNNNAGG	1 cut(s)	1896
EcoRI	GAATTC	3 cut(s)	878, 1330, 1721
EcoRII	CCWGG	9 cut(s)	201, 519, 576, 1033, 1175, 1561, 1588, 1897, 1929
EcoT14I	CCWWGG	2 cut(s)	860, 1106
EcoT38I	GRGCYC	2 cut(s)	126, 1528
ErhI	CCWWGG	2 cut(s)	860, 1106
Esp3I	CGTCTC	1 cut(s)	676
FalI	AAGNNNNNCTT	2 cut(s)	1485, 1517
FaqI	GGGAC	2 cut(s)	424, 1985
FauI	CCCGC	2 cut(s)	252, 354
FauNDI	CATATG	1 cut(s)	1516
FblI	GTMKAC	2 cut(s)	1734, 1963
Fnu4HI	GCNGC	8 cut(s)	158, 191, 498, 611, 738, 972, 1389, 1927
FokI	GGATG	5 cut(s)	1082, 1617, 1801, 1881, 2134
FriOI	GRGCYC	2 cut(s)	126, 1528
Fsp4HI	GCNGC	8 cut(s)	158, 191, 498, 611, 738, 972, 1389, 1927
FspBI	CTAG	4 cut(s)	462, 914, 1055, 1137
GlaI	GCGC	3 cut(s)	139, 799, 2111
GluI	GCNGC	8 cut(s)	158, 191, 498, 611, 738, 972, 1389, 1927
GsuI	CTGGAG	4 cut(s)	224, 599, 696, 1413
HaeII	RGCGCY	1 cut(s)	801
HaeIII	GGCC	6 cut(s)	144, 198, 541, 576, 1033, 1743
HapII	CCGG	3 cut(s)	57, 1371, 2003
HgaI	GACGC	2 cut(s)	96, 98
HhaI	GCGC	3 cut(s)	140, 800, 2112
Hin1I	GRCGYC	1 cut(s)	413
Hin6I	GCGC	3 cut(s)	138, 798, 2110
HinP1I	GCGC	3 cut(s)	138, 798, 2110
HpaII	CCGG	3 cut(s)	57, 1371, 2003
HphI	GGTGA	9 cut(s)	622, 713, 796, 1469, 1503, 1665, 1838, 1881, 1935
Hpy166II	GTNNAC	9 cut(s)	655, 850, 1559, 1611, 1642, 1735, 1829, 1964, 2135
Hpy188III	TCNNGA	8 cut(s)	332, 675, 829, 1264, 1283, 1493, 1547, 2009
Hpy8I	GTNNAC	9 cut(s)	655, 850, 1559, 1611, 1642, 1735, 1829, 1964, 2135
Hpy99I	CGWCG	4 cut(s)	92, 112, 398, 495
HpyAV	CCTTC	7 cut(s)	359, 552, 726, 900, 1261, 1797, 2061
HpyCH4III	ACNGT	5 cut(s)	26, 794, 1367, 1413, 2071
HpyCH4IV	ACGT	2 cut(s)	396, 413
HpyF10VI	GCNNNNNNNGC	4 cut(s)	358, 619, 827, 836
HpyF3I	CTNAG	6 cut(s)	33, 288, 695, 716, 1406, 1428
HpySE526I	ACGT	2 cut(s)	396, 413
Hsp92I	GRCGYC	1 cut(s)	413
HspAI	GCGC	3 cut(s)	138, 798, 2110
Kzo9I	GATC	8 cut(s)	16, 238, 565, 916, 942, 1018, 1849, 2005
LguI	GCTCTTC	2 cut(s)	877, 1516
LmnI	GCTCC	5 cut(s)	121, 205, 285, 909, 1531
Lsp1109I	GCAGC	7 cut(s)	144, 484, 622, 749, 983, 1375, 1938
LweI	GCATC	6 cut(s)	367, 373, 670, 958, 1040, 1608
MaeI	CTAG	4 cut(s)	462, 914, 1055, 1137
MaeII	ACGT	2 cut(s)	396, 413
MaeIII	GTNAC	2 cut(s)	701, 1413
MalI	GATC	8 cut(s)	18, 240, 567, 918, 944, 1020, 1851, 2007
MboI	GATC	8 cut(s)	16, 238, 565, 916, 942, 1018, 1849, 2005
MfeI	CAATTG	1 cut(s)	785
MflI	RGATCY	2 cut(s)	565, 1018
MhlI	GDGCHC	4 cut(s)	126, 354, 1528, 1644
MlsI	TGGCCA	1 cut(s)	1743
MluNI	TGGCCA	1 cut(s)	1743
MlyI	GAGTC	3 cut(s)	1365, 1768, 1959
MmeI	TCCRAC	5 cut(s)	111, 248, 616, 791, 2053
Mox20I	TGGCCA	1 cut(s)	1743
MroXI	GAANNNNTTC	1 cut(s)	1500
MscI	TGGCCA	1 cut(s)	1743
MseI	TTAA	5 cut(s)	747, 843, 1256, 1688, 1833
MslI	CAYNNNNRTG	4 cut(s)	809, 1551, 1616, 1797
Msp20I	TGGCCA	1 cut(s)	1743
MspI	CCGG	3 cut(s)	57, 1371, 2003
MunI	CAATTG	1 cut(s)	785
Mva1269I	GAATGC	3 cut(s)	823, 841, 1864
MvaI	CCWGG	9 cut(s)	203, 521, 578, 1035, 1177, 1563, 1590, 1899, 1931
MvnI	CGCG	4 cut(s)	107, 830, 1003, 2112
MwoI	GCNNNNNNNGC	4 cut(s)	358, 619, 827, 836
NciI	CCSGG	1 cut(s)	2003
NcoI	CCATGG	1 cut(s)	1106
NdeI	CATATG	1 cut(s)	1516
NdeII	GATC	8 cut(s)	16, 238, 565, 916, 942, 1018, 1849, 2005
NlaIV	GGNNCC	6 cut(s)	590, 911, 1020, 1262, 1369, 2039
NmeAIII	GCCGAG	3 cut(s)	209, 412, 526
NmuCI	GTSAC	2 cut(s)	701, 1413
NruI	TCGCGA	1 cut(s)	830
NspI	RCATGY	3 cut(s)	433, 1640, 1784
NspV	TTCGAA	1 cut(s)	957
OliI	CACNNNNGTG	1 cut(s)	809
PagI	TCATGA	1 cut(s)	1546
PceI	AGGCCT	1 cut(s)	541
PciI	ACATGT	3 cut(s)	429, 1636, 1780
PciSI	GCTCTTC	2 cut(s)	877, 1516
PcsI	WCGNNNNNNNCGW	1 cut(s)	221
PctI	GAATGC	3 cut(s)	823, 841, 1864
PdmI	GAANNNNTTC	1 cut(s)	1500
PfeI	GAWTC	7 cut(s)	1250, 1424, 1460, 1470, 1566, 1708, 1934
PflFI	GACNNNGTC	1 cut(s)	305
PflMI	CCANNNNNTGG	1 cut(s)	639
PfoI	TCCNGGA	2 cut(s)	1175, 2001
PkrI	GCNGC	8 cut(s)	159, 192, 499, 612, 739, 973, 1390, 1928
PleI	GAGTC	3 cut(s)	1364, 1768, 1959
PpsI	GAGTC	3 cut(s)	1364, 1768, 1959
PscI	ACATGT	3 cut(s)	429, 1636, 1780
PsiI	TTATAA	1 cut(s)	998
Psp124BI	GAGCTC	2 cut(s)	126, 1528
Psp6I	CCWGG	9 cut(s)	201, 519, 576, 1033, 1175, 1561, 1588, 1897, 1929
PspGI	CCWGG	9 cut(s)	201, 519, 576, 1033, 1175, 1561, 1588, 1897, 1929
PspN4I	GGNNCC	6 cut(s)	590, 911, 1020, 1262, 1369, 2039
PspPI	GGNCC	7 cut(s)	143, 196, 864, 1173, 1559, 1608, 1756
PsuI	RGATCY	2 cut(s)	565, 1018
PsyI	GACNNNGTC	1 cut(s)	305
RruI	TCGCGA	1 cut(s)	830
RsaI	GTAC	3 cut(s)	851, 1903, 2086
RsaNI	GTAC	3 cut(s)	850, 1902, 2085
RseI	CAYNNNNRTG	4 cut(s)	809, 1551, 1616, 1797
SacI	GAGCTC	2 cut(s)	126, 1528
SapI	GCTCTTC	2 cut(s)	877, 1516
SaqAI	TTAA	5 cut(s)	747, 843, 1256, 1688, 1833
SatI	GCNGC	8 cut(s)	158, 191, 498, 611, 738, 972, 1389, 1927
Sau3AI	GATC	8 cut(s)	16, 238, 565, 916, 942, 1018, 1849, 2005
Sau96I	GGNCC	7 cut(s)	143, 196, 864, 1173, 1559, 1608, 1756
SchI	GAGTC	3 cut(s)	1365, 1768, 1959
SduI	GDGCHC	4 cut(s)	126, 354, 1528, 1644
SfaNI	GCATC	6 cut(s)	367, 373, 670, 958, 1040, 1608
SfcI	CTRYAG	3 cut(s)	601, 793, 1960
SfuI	TTCGAA	1 cut(s)	957
SinI	GGWCC	5 cut(s)	864, 1173, 1559, 1608, 1756
SmiMI	CAYNNNNRTG	4 cut(s)	809, 1551, 1616, 1797
SseBI	AGGCCT	1 cut(s)	541
SsiI	CCGC	9 cut(s)	5, 105, 191, 245, 361, 1003, 1171, 2035, 2112
SspMI	CTAG	4 cut(s)	462, 914, 1055, 1137
SstI	GAGCTC	2 cut(s)	126, 1528
StuI	AGGCCT	1 cut(s)	541
StyI	CCWWGG	2 cut(s)	860, 1106
TaaI	ACNGT	5 cut(s)	26, 794, 1367, 1413, 2071
TaiI	ACGT	2 cut(s)	399, 416
TaqI	TCGA	2 cut(s)	270, 957
TatI	WGTACW	2 cut(s)	849, 2084
TauI	GCSGC	1 cut(s)	193
TfiI	GAWTC	7 cut(s)	1250, 1424, 1460, 1470, 1566, 1708, 1934
Tru1I	TTAA	5 cut(s)	747, 843, 1256, 1688, 1833
Tru9I	TTAA	5 cut(s)	747, 843, 1256, 1688, 1833
TscAI	CASTG	7 cut(s)	31, 153, 304, 640, 690, 1318, 1710
TseFI	GTSAC	2 cut(s)	701, 1413
TseI	GCWGC	7 cut(s)	157, 497, 610, 737, 971, 1388, 1926
Tsp45I	GTSAC	2 cut(s)	701, 1413
TspDTI	ATGAA	4 cut(s)	871, 1563, 1571, 1659
TspGWI	ACGGA	3 cut(s)	486, 631, 1463
TspRI	CASTG	7 cut(s)	31, 153, 304, 640, 690, 1318, 1710
Tth111I	GACNNNGTC	1 cut(s)	305
Van91I	CCANNNNNTGG	1 cut(s)	639
VneI	GTGCAC	1 cut(s)	1640
VpaK11BI	GGWCC	5 cut(s)	864, 1173, 1559, 1608, 1756
XagI	CCTNNNNNAGG	1 cut(s)	1896
XapI	RAATTY	4 cut(s)	878, 1287, 1330, 1721
XceI	RCATGY	3 cut(s)	433, 1640, 1784
XcmI	CCANNNNNNNNNTGG	2 cut(s)	290, 1370
XmiI	GTMKAC	2 cut(s)	1734, 1963
XmnI	GAANNNNTTC	1 cut(s)	1500
XspI	CTAG	4 cut(s)	462, 914, 1055, 1137
ZraI	GACGTC	1 cut(s)	414

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.