Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0006350

Physical Location & Seq

Genomic Coordinates Forward (+)

88220477 .. 88225554

Gene Structure 5078 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00066710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGGCGGGTCTGATCGATCTGAACAGCACGACAGAGGAGGAGGAGGAGACTCCGTCTTCTGGGTCGTCGTCCAATTCCTCCGGCTCTAATGCTTTGATTTCTGGGTCTGTTTGCTTGGAGCTGTGGCACGCTTGTGCTGGACCACTGATTTCTTTGCCCAAGAAAGGCAGTGTGGTGGTTTATCTTCCACAAGGGCACTTGGAGCAAGTGAATGACTTTCCGGCGTCGGTTTATGATCTTCCTCCTCATCTCTTCTGCCGAGTAGTGGATGTTAAGCTCCATGCGGAGACTGGTAGTGATGAAGTCTACGCACAGGTTCAGTTGGTTCCTGAAAGTGAGGAATTTGAGCACAAACTAGGGGAAGGGGAAACTGATGCAGATGGGGATGAGGATGCTGAGGCATTAGAGAAATCAACTACACCCCATATGTTCTGCAAAACCCTTACTGCTTCCGATACTAGCACTCATGGAGGCTTCTCTGTCCCTCGCCGTGCTGCTGAGGATTGTTTTCCTCCCCTGGATTATAGTCAACAAAGGCCTTCACAGGAGCTGGTGGCAAAGGATCTGCATGGCCTGGAGTGGAGGGGTGAGGATGGAGAACTGAGACTTGGAGTTAGAAGGGCAGCCCAAGTAAAAGCTTCTGCTACTTATCCAACTCCTTGTAGCCAGCATTTAAACTATAACTCTGTCGCAGAGGTGGTGGATGCAATAACTATGAAGACTGCTTTTAACGTGTACTACAATCCAAGAGCCAGCTCATCAGAATTCATAATACCTTTCCATAAATTTTTGAGGAGTCTTGGTCATTCCTTCTGTGCTGGAATGAGGTTTAAAATGCGCTTTGAAACAGAAGATGCAGCAGAGCGAAGATACACTGGACTGGTAACTGGGATCAGTGAGTTGGATCCCCTGAGATGGCCTGGTTCCAAATGGAAATGTCTAGTTGTAAGGTGGGATGATATAGATACTAGTAAGCAGCATGGCCGGGTTTCCCCATGGGAAATTGAGCCATCTGGTTCTATTTCTAATTCCAGTGGCTTAATGGCATCTGGTTTGAAGAGGTCCAGGATGGGCTTATCTGCAGAAAAACAAGAATTTCCAGTTCCTCATGGGATTGGAGCCTCAGACTTTGGGGAATCTTTAAGATTCCAGAAGGTCTTGCAAGGTCAAGAAATTTCGGGTTTTGATACTCCTTTTGGTTCTATAGGGGGTCAAAATCAGCATCCCTCTGAATCGAGGAGAGTCTTTCATGGCTCTATTGGTTCTAGAGGTCAAGAAATATTTCCAAGCACACCATATGGAAGAGCTCCAGCTACTAGTGAGGCTCGTGAATATGGTTCCCCTGGAATCTTTGATGGTTTTCAGGTGCCAAGCTTTAGAAATGGATGGTCTACGATGATGCAGGGCAATAATACACCTATGCACCGAGCTGCTCCTGTACAAGTGTCATCACCATCATCTGTGTTGATGTTCCAGCAAGCAATGAATGCAGGAGCTGAGTTCAATTCCGTATACAATGGTCATAACCAAGAGGAACAGAGAATTATGCAGCGTAATCCTTATTCTGAATCAGATGGGGGAAAGCCAACATCATCCTCATTCTGTGAACGGAGCTTCAGCAGGGAAGGTCATGTAGGCATGAATTCTTTTCAACATGCTATTTCACATCCTCCTCATTCCAGTCAGTCTTCATTGAGAGGCAGTCAAGACATGGTTGCATCATGCAAAAGTAGCTGCAGACTCTTTGGTTTCTCCCTGTCTGAGGAAACACATGCCCCAAATAAAGTTGACAACTCCACCTCAGTTGCATCTACATTAGATCCTGGAGCTTCTTTGTTCCCCAATGTTGAACCACGGTTTCATTCAAAGCCTCCTTTGATGTCTGCAGCAGTTGGAATTCCCTGTACCAAATTGAGAATTTTTACGTTCAGGAATGGGCTTTTGACTGGCGTGGAGAAAGGATGGAAAGTTGTTTACAAGGATAGTGACAATGACGCAGGGCTTGTTGGGATGTTCCACGGAAGAATTGCTACCACAATATTATGTAAGAAGTACAAGAGTGAAGACTCTTGGCGCCGGAGGTTTTTCTCAGGTTCTGCATGTGTTGTGTTTTATGTAACTGAACTACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001708 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009850 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010022 GO:0010033 GO:0010050 GO:0010073 GO:0010158 GO:0010468 GO:0010556 GO:0010582 GO:0010817 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0042445 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044464 GO:0045165 GO:0048367 GO:0048507 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0065008 GO:0080090 GO:0090567 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

710

Amino Acids

77.86

Weight (kDa)

5.96

Isoelectric Point (pI)

53.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BRWD_AD	PF25313	236 - 338	3e-06	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	256 - 338	7e-34	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006350)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33860 AT2G33860
fragaria_vesca	FvH4_3g08450 FvH4_3g08450 FvH4_3g08450 FvH4_3g08450 FvH4_3g08450 FvH4_3g08450
malus_domestica	MD05G1309400.v1.1 MD10G1287900.v1.1
prunus_persica	Prupe.4G053800_v2.0.a1 Prupe.4G053800_v2.0.a1 Prupe.4G053800_v2.0.a1
pyrus_communis	pycom05g28570 pycom10g24090
rosa_chinensis	RchiOBHm_Chr5g0009381
rosa_laevigata	RLG00000031657
rosa_multiflora	Rmu_sc0002711.1_g000019
rosa_roxburghii	Rroxscaffold_1G00066710 Rroxscaffold_1G00067410
rosa_rugosa	Rorug04G0442500
rosa_samantha	Rh5AG073100 Rh5AG073700 Rh5BG069500 Rh5CG081900 Rh5DG069800
rosa_wichuraiana	Rw5G006830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1366, 2073
AccI	GTMKAC	3 cut(s)	306, 1391, 1512
AciI	CCGC	2 cut(s)	5, 284
AclWI	GGATC	5 cut(s)	570, 899, 899, 912, 1814
AcoI	YGGCCR	1 cut(s)	982
AcsI	RAATTY	8 cut(s)	341, 764, 785, 1094, 1173, 1642, 1896, 1917
AcuI	CTGAAG	1 cut(s)	1600
AcyI	GRCGYC	2 cut(s)	224, 2074
AfaI	GTAC	4 cut(s)	737, 1440, 1906, 2054
AfiI	CCNNNNNNNGG	5 cut(s)	59, 164, 265, 915, 1762
AflIII	ACRYGT	1 cut(s)	732
AgsI	TTSAA	6 cut(s)	845, 1057, 1504, 1652, 1850, 1866
AhlI	ACTAGT	2 cut(s)	968, 1316
AjnI	CCWGG	6 cut(s)	516, 573, 919, 1064, 1342, 1822
AjuI	GAANNNNNNNTTGG	2 cut(s)	591, 623
AleI	CACNNNNGTG	1 cut(s)	132
Alw21I	GWGCWC	2 cut(s)	351, 1309
Alw26I	GTCTC	3 cut(s)	41, 281, 598
AlwI	GGATC	5 cut(s)	570, 899, 899, 912, 1814
AlwNI	CAGNNNCTG	3 cut(s)	550, 1496, 2096
AoxI	GGCC	4 cut(s)	536, 571, 917, 982
ApeKI	GCWGC	8 cut(s)	494, 623, 857, 976, 1430, 1549, 1734, 1886
ApoI	RAATTY	8 cut(s)	341, 764, 785, 1094, 1173, 1642, 1896, 1917
Asp700I	GAANNNNTTC	1 cut(s)	1281
AspLEI	GCGC	2 cut(s)	840, 2076
AspS9I	GGNCC	2 cut(s)	140, 1062
AsuC2I	CCSGG	1 cut(s)	986
AsuHPI	GGTGA	2 cut(s)	599, 1443
AvaII	GGWCC	2 cut(s)	140, 1062
BaeGI	GKGCMC	1 cut(s)	198
BamHI	GGATCC	1 cut(s)	904
BanI	GGYRCC	2 cut(s)	1366, 2073
BanII	GRGCYC	1 cut(s)	1309
BarI	GAAGNNNNNNTAC	2 cut(s)	2014, 2046
BauI	CACGAG	1 cut(s)	1326
BbsI	GAAGAC	4 cut(s)	48, 725, 1680, 2070
Bbv12I	GWGCWC	2 cut(s)	351, 1309
BbvCI	CCTCAGC	2 cut(s)	396, 498
BbvI	GCAGC	8 cut(s)	481, 635, 869, 988, 1417, 1561, 1721, 1898
BceAI	ACGGC	1 cut(s)	474
BciT130I	CCWGG	6 cut(s)	518, 575, 921, 1066, 1344, 1824
BcnI	CCSGG	1 cut(s)	986
BcoDI	GTCTC	3 cut(s)	41, 281, 598
BcuI	ACTAGT	2 cut(s)	968, 1316
BfaI	CTAG	6 cut(s)	356, 459, 941, 969, 1266, 1317
BfmI	CTRYAG	4 cut(s)	1080, 1203, 1735, 1884
BfoI	RGCGCY	1 cut(s)	2077
BisI	GCNGC	8 cut(s)	495, 624, 858, 977, 1431, 1550, 1735, 1887
BlsI	GCNGC	8 cut(s)	496, 625, 859, 978, 1432, 1551, 1736, 1888
Bme1390I	CCNGG	7 cut(s)	518, 575, 921, 986, 1066, 1344, 1824
Bme18I	GGWCC	2 cut(s)	140, 1062
BmgT120I	GGNCC	2 cut(s)	140, 1062
BmiI	GGNNCC	7 cut(s)	327, 906, 925, 1120, 1339, 1368, 2075
BmrFI	CCNGG	7 cut(s)	518, 575, 921, 986, 1066, 1344, 1824
BmrI	ACTGGG	1 cut(s)	897
BmsI	GCATC	9 cut(s)	364, 382, 694, 844, 1055, 1231, 1389, 1727, 1817
BmuI	ACTGGG	1 cut(s)	897
BpiI	GAAGAC	4 cut(s)	48, 725, 1680, 2070
BpmI	CTGGAG	3 cut(s)	596, 1293, 1845
Bpu10I	CCTNAGC	2 cut(s)	396, 498
BpuMI	CCSGG	1 cut(s)	986
Bsa29I	ATCGAT	1 cut(s)	15
BsaHI	GRCGYC	2 cut(s)	224, 2074
BsaJI	CCNNGG	5 cut(s)	516, 995, 1342, 1853, 2017
BsaXI	ACNNNNNCTCC	4 cut(s)	38, 68, 787, 817
Bsc4I	CCNNNNNNNGG	5 cut(s)	59, 164, 265, 915, 1762
Bse1I	ACTGG	8 cut(s)	295, 880, 885, 892, 1032, 1100, 1680, 1951
Bse3DI	GCAATG	1 cut(s)	1488
BseBI	CCWGG	6 cut(s)	518, 575, 921, 1066, 1344, 1824
BseCI	ATCGAT	1 cut(s)	15
BseDI	CCNNGG	5 cut(s)	516, 995, 1342, 1853, 2017
BseLI	CCNNNNNNNGG	5 cut(s)	59, 164, 265, 915, 1762
BseMI	GCAATG	1 cut(s)	1488
BseMII	CTCAG	9 cut(s)	387, 489, 593, 902, 1137, 1488, 1752, 1815, 2103
BseNI	ACTGG	8 cut(s)	295, 880, 885, 892, 1032, 1100, 1680, 1951
BseRI	GAGGAG	8 cut(s)	50, 53, 56, 59, 234, 808, 1252, 1662
BseSI	GKGCMC	1 cut(s)	198
BseXI	GCAGC	8 cut(s)	481, 635, 869, 988, 1417, 1561, 1721, 1898
BshFI	GGCC	4 cut(s)	538, 573, 919, 984
BshNI	GGYRCC	2 cut(s)	1366, 2073
BshVI	ATCGAT	1 cut(s)	15
BsiHKAI	GWGCWC	2 cut(s)	351, 1309
BsiSI	CCGG	4 cut(s)	81, 221, 985, 2077
BslFI	GGGAC	1 cut(s)	467
BslI	CCNNNNNNNGG	5 cut(s)	59, 164, 265, 915, 1762
BsmAI	GTCTC	3 cut(s)	41, 281, 598
BsmFI	GGGAC	1 cut(s)	467
BsmI	GAATGC	1 cut(s)	1492
BsnI	GGCC	4 cut(s)	538, 573, 919, 984
Bsp1286I	GDGCHC	3 cut(s)	198, 351, 1309
Bsp1407I	TGTACA	1 cut(s)	1438
Bsp143I	GATC	7 cut(s)	12, 16, 235, 562, 891, 904, 1819
Bsp19I	CCATGG	1 cut(s)	995
BspACI	CCGC	2 cut(s)	5, 284
BspANI	GGCC	4 cut(s)	538, 573, 919, 984
BspCNI	CTCAG	9 cut(s)	388, 490, 594, 903, 1136, 1489, 1753, 1814, 2102
BspDI	ATCGAT	1 cut(s)	15
BspLI	GGNNCC	7 cut(s)	327, 906, 925, 1120, 1339, 1368, 2075
BspMAI	CTGCAG	3 cut(s)	1084, 1739, 1888
BspPI	GGATC	5 cut(s)	570, 899, 899, 912, 1814
BspQI	GCTCTTC	1 cut(s)	1297
BspT107I	GGYRCC	2 cut(s)	1366, 2073
BsrDI	GCAATG	1 cut(s)	1488
BsrGI	TGTACA	1 cut(s)	1438
BsrI	ACTGG	8 cut(s)	295, 880, 885, 892, 1032, 1100, 1680, 1951
BssECI	CCNNGG	5 cut(s)	516, 995, 1342, 1853, 2017
BssMI	GATC	7 cut(s)	12, 16, 235, 562, 891, 904, 1819
BssNAI	GTATAC	1 cut(s)	1513
BssNI	GRCGYC	2 cut(s)	224, 2074
BssSI	CACGAG	1 cut(s)	1326
BssT1I	CCWWGG	1 cut(s)	995
Bst1107I	GTATAC	1 cut(s)	1513
Bst2BI	CACGAG	1 cut(s)	1326
Bst2UI	CCWGG	6 cut(s)	518, 575, 921, 1066, 1344, 1824
Bst4CI	ACNGT	1 cut(s)	1857
Bst6I	CTCTTC	3 cut(s)	257, 1052, 1297
BstACI	GRCGYC	2 cut(s)	224, 2074
BstAPI	GCANNNNNTGC	1 cut(s)	1487
BstAUI	TGTACA	1 cut(s)	1438
BstC8I	GCNNGC	4 cut(s)	129, 668, 754, 1479
BstDEI	CTNAG	9 cut(s)	396, 498, 602, 911, 1123, 1497, 1761, 1801, 2089
BstDSI	CCRYGG	3 cut(s)	995, 1853, 2017
BstENI	CCTNNNNNAGG	1 cut(s)	1760
BstH2I	RGCGCY	1 cut(s)	2077
BstHHI	GCGC	2 cut(s)	840, 2076
BstKTI	GATC	7 cut(s)	15, 19, 238, 565, 894, 907, 1822
BstMAI	GTCTC	3 cut(s)	41, 281, 598
BstMBI	GATC	7 cut(s)	12, 16, 235, 562, 891, 904, 1819
BstMWI	GCNNNNNNNGC	3 cut(s)	202, 1487, 1731
BstNI	CCWGG	6 cut(s)	518, 575, 921, 1066, 1344, 1824
BstNSI	RCATGY	3 cut(s)	1658, 1775, 2103
BstSCI	CCNGG	7 cut(s)	516, 573, 919, 984, 1064, 1342, 1822
BstSFI	CTRYAG	4 cut(s)	1080, 1203, 1735, 1884
BstSLI	GKGCMC	1 cut(s)	198
BstV1I	GCAGC	8 cut(s)	481, 635, 869, 988, 1417, 1561, 1721, 1898
BstV2I	GAAGAC	4 cut(s)	48, 725, 1680, 2070
BstX2I	RGATCY	3 cut(s)	562, 904, 1819
BstYI	RGATCY	3 cut(s)	562, 904, 1819
BstZ17I	GTATAC	1 cut(s)	1513
Bsu15I	ATCGAT	1 cut(s)	15
BsuRI	GGCC	4 cut(s)	538, 573, 919, 984
BsuTUI	ATCGAT	1 cut(s)	15
BtgI	CCRYGG	3 cut(s)	995, 1853, 2017
BtsI	GCAGTG	1 cut(s)	175
BtsIMutI	CAGTG	5 cut(s)	143, 175, 873, 901, 1039
Cac8I	GCNNGC	4 cut(s)	129, 668, 754, 1479
CaiI	CAGNNNCTG	3 cut(s)	550, 1496, 2096
CfoI	GCGC	2 cut(s)	840, 2076
Cfr13I	GGNCC	2 cut(s)	140, 1062
ClaI	ATCGAT	1 cut(s)	15
CseI	GACGC	2 cut(s)	213, 2003
Csp6I	GTAC	4 cut(s)	736, 1439, 1905, 2053
CspCI	CAANNNNNGTGG	2 cut(s)	1786, 1821
CviQI	GTAC	4 cut(s)	736, 1439, 1905, 2053
DdeI	CTNAG	9 cut(s)	396, 498, 602, 911, 1123, 1497, 1761, 1801, 2089
DinI	GGCGCC	1 cut(s)	2075
DpnI	GATC	7 cut(s)	14, 18, 237, 564, 893, 906, 1821
DpnII	GATC	7 cut(s)	12, 16, 235, 562, 891, 904, 1819
DraI	TTTAAA	2 cut(s)	675, 832
EaeI	YGGCCR	1 cut(s)	982
Eam1104I	CTCTTC	3 cut(s)	257, 1052, 1297
EarI	CTCTTC	3 cut(s)	257, 1052, 1297
Ecl136II	GAGCTC	1 cut(s)	1307
Eco130I	CCWWGG	1 cut(s)	995
Eco147I	AGGCCT	1 cut(s)	538
Eco24I	GRGCYC	1 cut(s)	1309
Eco47I	GGWCC	2 cut(s)	140, 1062
Eco53kI	GAGCTC	1 cut(s)	1307
Eco57I	CTGAAG	1 cut(s)	1600
EcoICRI	GAGCTC	1 cut(s)	1307
EcoNI	CCTNNNNNAGG	1 cut(s)	1760
EcoRI	GAATTC	3 cut(s)	764, 1642, 1896
EcoRII	CCWGG	6 cut(s)	516, 573, 919, 1064, 1342, 1822
EcoT14I	CCWWGG	1 cut(s)	995
EcoT38I	GRGCYC	1 cut(s)	1309
EgeI	GGCGCC	1 cut(s)	2075
EheI	GGCGCC	1 cut(s)	2075
ErhI	CCWWGG	1 cut(s)	995
FaqI	GGGAC	1 cut(s)	467
FauNDI	CATATG	2 cut(s)	426, 1297
FblI	GTMKAC	3 cut(s)	306, 1391, 1512
Fnu4HI	GCNGC	8 cut(s)	495, 624, 858, 977, 1431, 1550, 1735, 1887
FriOI	GRGCYC	1 cut(s)	1309
Fsp4HI	GCNGC	8 cut(s)	495, 624, 858, 977, 1431, 1550, 1735, 1887
FspBI	CTAG	6 cut(s)	356, 459, 941, 969, 1266, 1317
GlaI	GCGC	2 cut(s)	839, 2075
GluI	GCNGC	8 cut(s)	495, 624, 858, 977, 1431, 1550, 1735, 1887
GsuI	CTGGAG	3 cut(s)	596, 1293, 1845
HaeII	RGCGCY	1 cut(s)	2077
HaeIII	GGCC	4 cut(s)	538, 573, 919, 984
HapII	CCGG	4 cut(s)	81, 221, 985, 2077
HgaI	GACGC	2 cut(s)	213, 2003
HhaI	GCGC	2 cut(s)	840, 2076
Hin1I	GRCGYC	2 cut(s)	224, 2074
Hin6I	GCGC	2 cut(s)	838, 2074
HinP1I	GCGC	2 cut(s)	838, 2074
HincII	GTYRAC	2 cut(s)	530, 1789
HindII	GTYRAC	2 cut(s)	530, 1789
HindIII	AAGCTT	2 cut(s)	636, 1372
HpaII	CCGG	4 cut(s)	81, 221, 985, 2077
HphI	GGTGA	2 cut(s)	599, 1443
Hpy166II	GTNNAC	8 cut(s)	307, 530, 736, 1392, 1513, 1607, 1789, 1975
Hpy188I	TCNGA	9 cut(s)	12, 21, 454, 763, 1126, 1231, 1567, 1573, 1762
Hpy188III	TCNNGA	8 cut(s)	329, 1150, 1169, 1266, 1274, 1328, 1706, 1930
Hpy8I	GTNNAC	8 cut(s)	307, 530, 736, 1392, 1513, 1607, 1789, 1975
Hpy99I	CGWCG	2 cut(s)	70, 229
HpyAV	CCTTC	6 cut(s)	356, 549, 612, 820, 1147, 1619
HpyCH4III	ACNGT	1 cut(s)	1857
HpyCH4IV	ACGT	2 cut(s)	732, 1925
HpyF10VI	GCNNNNNNNGC	3 cut(s)	202, 1487, 1731
HpyF3I	CTNAG	9 cut(s)	396, 498, 602, 911, 1123, 1497, 1761, 1801, 2089
HpySE526I	ACGT	2 cut(s)	732, 1925
Hsp92I	GRCGYC	2 cut(s)	224, 2074
HspAI	GCGC	2 cut(s)	838, 2074
KasI	GGCGCC	1 cut(s)	2073
Kzo9I	GATC	7 cut(s)	12, 16, 235, 562, 891, 904, 1819
LguI	GCTCTTC	1 cut(s)	1297
Lsp1109I	GCAGC	8 cut(s)	481, 635, 869, 988, 1417, 1561, 1721, 1898
LweI	GCATC	9 cut(s)	364, 382, 694, 844, 1055, 1231, 1389, 1727, 1817
MaeI	CTAG	6 cut(s)	356, 459, 941, 969, 1266, 1317
MaeII	ACGT	2 cut(s)	732, 1925
MaeIII	GTNAC	3 cut(s)	883, 1985, 2116
MalI	GATC	7 cut(s)	14, 18, 237, 564, 893, 906, 1821
MboI	GATC	7 cut(s)	12, 16, 235, 562, 891, 904, 1819
MflI	RGATCY	3 cut(s)	562, 904, 1819
MhlI	GDGCHC	3 cut(s)	198, 351, 1309
Mly113I	GGCGCC	1 cut(s)	2074
MlyI	GAGTC	5 cut(s)	43, 805, 1251, 1734, 2060
MmeI	TCCRAC	3 cut(s)	677, 882, 1873
MroXI	GAANNNNTTC	1 cut(s)	1281
MseI	TTAA	6 cut(s)	273, 674, 729, 831, 1040, 1142
MslI	CAYNNNNRTG	1 cut(s)	132
MspI	CCGG	4 cut(s)	81, 221, 985, 2077
MspR9I	CCNGG	7 cut(s)	518, 575, 921, 986, 1066, 1344, 1824
Mva1269I	GAATGC	1 cut(s)	1492
MvaI	CCWGG	6 cut(s)	518, 575, 921, 1066, 1344, 1824
MwoI	GCNNNNNNNGC	3 cut(s)	202, 1487, 1731
NarI	GGCGCC	1 cut(s)	2074
NciI	CCSGG	1 cut(s)	986
NcoI	CCATGG	1 cut(s)	995
NdeI	CATATG	2 cut(s)	426, 1297
NdeII	GATC	7 cut(s)	12, 16, 235, 562, 891, 904, 1819
NlaIV	GGNNCC	7 cut(s)	327, 906, 925, 1120, 1339, 1368, 2075
NmeAIII	GCCGAG	1 cut(s)	284
NmuCI	GTSAC	1 cut(s)	1985
NspI	RCATGY	3 cut(s)	1658, 1775, 2103
OliI	CACNNNNGTG	1 cut(s)	132
PceI	AGGCCT	1 cut(s)	538
PciSI	GCTCTTC	1 cut(s)	1297
PctI	GAATGC	1 cut(s)	1492
PdmI	GAANNNNTTC	1 cut(s)	1281
PfeI	GAWTC	5 cut(s)	1136, 1146, 1232, 1347, 1568
PflFI	GACNNNGTC	1 cut(s)	52
PfoI	TCCNGGA	2 cut(s)	1064, 1822
PkrI	GCNGC	8 cut(s)	496, 625, 859, 978, 1432, 1551, 1736, 1888
PleI	GAGTC	5 cut(s)	43, 804, 1250, 1734, 2060
PluTI	GGCGCC	1 cut(s)	2077
PpsI	GAGTC	5 cut(s)	43, 804, 1250, 1734, 2060
Psp124BI	GAGCTC	1 cut(s)	1309
Psp6I	CCWGG	6 cut(s)	516, 573, 919, 1064, 1342, 1822
PspGI	CCWGG	6 cut(s)	516, 573, 919, 1064, 1342, 1822
PspN4I	GGNNCC	7 cut(s)	327, 906, 925, 1120, 1339, 1368, 2075
PspPI	GGNCC	2 cut(s)	140, 1062
PstI	CTGCAG	3 cut(s)	1084, 1739, 1888
PstNI	CAGNNNCTG	3 cut(s)	550, 1496, 2096
PsuI	RGATCY	3 cut(s)	562, 904, 1819
PsyI	GACNNNGTC	1 cut(s)	52
RsaI	GTAC	4 cut(s)	737, 1440, 1906, 2054
RsaNI	GTAC	4 cut(s)	736, 1439, 1905, 2053
RseI	CAYNNNNRTG	1 cut(s)	132
SacI	GAGCTC	1 cut(s)	1309
SapI	GCTCTTC	1 cut(s)	1297
SaqAI	TTAA	6 cut(s)	273, 674, 729, 831, 1040, 1142
SatI	GCNGC	8 cut(s)	495, 624, 858, 977, 1431, 1550, 1735, 1887
Sau3AI	GATC	7 cut(s)	12, 16, 235, 562, 891, 904, 1819
Sau96I	GGNCC	2 cut(s)	140, 1062
SchI	GAGTC	5 cut(s)	43, 805, 1251, 1734, 2060
ScrFI	CCNGG	7 cut(s)	518, 575, 921, 986, 1066, 1344, 1824
SduI	GDGCHC	3 cut(s)	198, 351, 1309
SfaNI	GCATC	9 cut(s)	364, 382, 694, 844, 1055, 1231, 1389, 1727, 1817
SfcI	CTRYAG	4 cut(s)	1080, 1203, 1735, 1884
SfoI	GGCGCC	1 cut(s)	2075
SinI	GGWCC	2 cut(s)	140, 1062
SmiMI	CAYNNNNRTG	1 cut(s)	132
SpeI	ACTAGT	2 cut(s)	968, 1316
SseBI	AGGCCT	1 cut(s)	538
SsiI	CCGC	2 cut(s)	5, 284
SspDI	GGCGCC	1 cut(s)	2073
SspI	AATATT	2 cut(s)	1281, 2040
SspMI	CTAG	6 cut(s)	356, 459, 941, 969, 1266, 1317
SstI	GAGCTC	1 cut(s)	1309
StuI	AGGCCT	1 cut(s)	538
StyD4I	CCNGG	7 cut(s)	516, 573, 919, 984, 1064, 1342, 1822
StyI	CCWWGG	1 cut(s)	995
TaaI	ACNGT	1 cut(s)	1857
TaiI	ACGT	2 cut(s)	735, 1928
TaqI	TCGA	2 cut(s)	15, 1235
TatI	WGTACW	3 cut(s)	735, 1438, 2052
TfiI	GAWTC	5 cut(s)	1136, 1146, 1232, 1347, 1568
Tru1I	TTAA	6 cut(s)	273, 674, 729, 831, 1040, 1142
Tru9I	TTAA	6 cut(s)	273, 674, 729, 831, 1040, 1142
TscAI	CASTG	5 cut(s)	150, 175, 880, 901, 1039
TseFI	GTSAC	1 cut(s)	1985
TseI	GCWGC	8 cut(s)	494, 623, 857, 976, 1430, 1549, 1734, 1886
Tsp45I	GTSAC	1 cut(s)	1985
TspDTI	ATGAA	8 cut(s)	315, 731, 757, 1238, 1499, 1655, 1680, 1850
TspGWI	ACGGA	4 cut(s)	42, 1498, 1624, 2034
TspRI	CASTG	5 cut(s)	150, 175, 880, 901, 1039
Tth111I	GACNNNGTC	1 cut(s)	52
VpaK11BI	GGWCC	2 cut(s)	140, 1062
XagI	CCTNNNNNAGG	1 cut(s)	1760
XapI	RAATTY	8 cut(s)	341, 764, 785, 1094, 1173, 1642, 1896, 1917
XbaI	TCTAGA	1 cut(s)	1265
XceI	RCATGY	3 cut(s)	1658, 1775, 2103
XcmI	CCANNNNNNNNNTGG	2 cut(s)	287, 1039
XmiI	GTMKAC	3 cut(s)	306, 1391, 1512
XmnI	GAANNNNTTC	1 cut(s)	1281
XspI	CTAG	6 cut(s)	356, 459, 941, 969, 1266, 1317

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.