Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0006350

Physical Location & Seq

Genomic Coordinates Reverse (-)

7062635 .. 7067621

Gene Structure 4987 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G006830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGGCGGGTCTGATCGATCTGAACAGCACGACGGAGGAGGAGGAGGAGACTCCGTCTTCTGGGTCGTCGTCCAATTCCTCCGGTTCTAATGCTTTGATTTCTGGGTCTGTTTGCTTGGAGCTGTGGCACGCTTGTGCTGGACCACTGATTTCTTTGCCCAAGAAAGGTAGTGTGGTGGTTTATCTTCCACAAGGGCACTTGGAGCAAGTGAATGATTTTCCGGCGTCGGTTTATGATCTTCCTGCTCATCTCTTCTGCCGAGTTGTCGATGTTAAGCTCCATGCGGAGACTGGGAGTGATGAAGTCTACGCACAGGTTCAGTTGGTTCCTGAAAGTGAGGAATTCGAGCACAAACTAGGGGAAGGGGAAACTGATGCAGATGGGGATGAGGATGCTGAGGCATTAGAGAAATCGACTACACCCCATATGTTCTGCAAAACCCTTACTGCTTCCGATACTAGCACTCATGGAGGTTTCTCTGTCCCTCGCCGTGCTGCTGAGGATTGTTTTCCTCCCCTGGATTATAGTCAACAAAGGCCTTCACAGGAGCTGGTGGCAAAGGATCTGCATGGCCTGGAGTGGAGGTTCAGACATATTTATAGGGGGCAGCCGCGCAGGCATTTGCTCACCACTGGATGGAGTGCCTTTGTGAACAAGAAGAAGCTCGTTTCTGGAGATGCTGTGTTGTTTCTGAGGGGTGAGGATGGAGAGCTGAGACTTGGAGTTAGAAGGGCAGCCCAAGTAAAAGCTTCTGCTACTTATCCAACTCCTTGTAGCCAGCATTTAAACTATAACTCTGTCGCAGAGGTGGTGGATGCAATAACTATGAAGACTGCTTTTAACGTGTACTACAATCCAAGAGCCAGCTCATCAGAATTCATAATACCTTTCCATAAATTTTTGAGGAGCCTTGGTCATTCCTTCTGTGCTGGAATGAGGTTTAAAATGCGCTTTGAAACAGAAGATGCAGCAGAGCGAAGATACACTGGACTGGTAACTGGGATCAGTGAGTTGGATTCCCTGAGATGGCCTGGTTCCAAATGGAAATGTCTAGTTGTAAGGTGGGATGATATAGATACTAGCAAGCAGCATGGCCGGGTTTCCCCATGGGAAATTGAGCCATCTGGTTCTATTTCTAATTCCAGTGGCTTAATGGCATCTGGTTTGAAGAGGTCCAGGATGGGCTTATCTGCAGAAAAACAAGAATTTCCAGTTCCTCATGGGGTTGGAGCCTCAGACTTTGGGGAATCTTTAAGATTCCAGAAGGTCTTGCAAGGTCAAGAAATATTTCCAAGCACACCATATGGAAGAGCTCCAGCTACTAGTGAGGCTCGTGAATATGGTTCCCCTGGAATCTTTGATGGTTTTCAGGTGCCAAGCTTTAGAAATGGATGGTCTACGATGATGCAGGGCAATAATACACCTATGCACCGAGCTGCTCCTGTACAAGTGTCATCACCATCATCTGTGTTGATGTTCCAGCAAGCAATGAATGCAGGAGCTGAGTTCAATTCCGTATACAATGGTCATAACCAAGAGGAACAGAGAATTATGCAACGCAATCCTTATTCTGAATCAGATGGGGGAAAGCCAACATCATCCTCATTCTGTGAACGGAGCTTCAGCAGGGAAGGTCATGGAGGCATGAATTCTTTTCAACATGCTATTTCACATCCTCCTCATTCAAGTCAGTCTTCATTGAGAGGCAGTCAAGACATGGTTTCATCATGCAAAAGTAGCTGCAGACTCTTTGGTTTCTCACTGTCTGAGGAAACACATGCTCCAAATAAAGTGGACAACTCCACCTCAGTTGCATCTACATTAGATCCTGGAGCTTCTCTGTTCCCCAATGTTGAACCACGGTTTCATTCAAAGCCTCCTTTGATGTCTGCAGCAGTTGGAATTCCCTGTACCAAAGAATGGGCTTTTGACTGGCGTGGAGAAAGGATGGAAAGTTGTTTACAAGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001708 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009850 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010022 GO:0010033 GO:0010050 GO:0010073 GO:0010158 GO:0010468 GO:0010556 GO:0010582 GO:0010817 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0042445 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044464 GO:0045165 GO:0048367 GO:0048507 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0065008 GO:0080090 GO:0090567 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

656

Amino Acids

72.12

Weight (kDa)

5.93

Isoelectric Point (pI)

53.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	144 - 245	1.7e-23	B3 DNA binding domain
BRWD_AD	PF25313	273 - 375	1.7e-06	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	293 - 375	1.4e-33	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006350)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33860 AT2G33860
fragaria_vesca	FvH4_3g08450 FvH4_3g08450 FvH4_3g08450 FvH4_3g08450 FvH4_3g08450 FvH4_3g08450
malus_domestica	MD05G1309400.v1.1 MD10G1287900.v1.1
prunus_persica	Prupe.4G053800_v2.0.a1 Prupe.4G053800_v2.0.a1 Prupe.4G053800_v2.0.a1
pyrus_communis	pycom05g28570 pycom10g24090
rosa_chinensis	RchiOBHm_Chr5g0009381
rosa_laevigata	RLG00000031657
rosa_multiflora	Rmu_sc0002711.1_g000019
rosa_roxburghii	Rroxscaffold_1G00066710 Rroxscaffold_1G00067410
rosa_rugosa	Rorug04G0442500
rosa_samantha	Rh5AG073100 Rh5AG073700 Rh5BG069500 Rh5CG081900 Rh5DG069800
rosa_wichuraiana	Rw5G006830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1372
AccB7I	CCANNNNNTGG	2 cut(s)	636, 1920
AccI	GTMKAC	3 cut(s)	306, 1397, 1518
AccII	CGCG	1 cut(s)	613
AciI	CCGC	3 cut(s)	5, 284, 611
AclWI	GGATC	3 cut(s)	570, 1010, 1820
AcoI	YGGCCR	1 cut(s)	1093
AcsI	RAATTY	6 cut(s)	341, 875, 896, 1205, 1648, 1902
AcuI	CTGAAG	1 cut(s)	1606
AcyI	GRCGYC	1 cut(s)	224
AfaI	GTAC	3 cut(s)	848, 1446, 1912
AfiI	CCNNNNNNNGG	5 cut(s)	59, 164, 636, 1026, 1920
AflIII	ACRYGT	1 cut(s)	843
AgsI	TTSAA	7 cut(s)	956, 1168, 1510, 1658, 1686, 1856, 1872
AhlI	ACTAGT	1 cut(s)	1322
AjnI	CCWGG	6 cut(s)	516, 573, 1030, 1175, 1348, 1828
AleI	CACNNNNGTG	1 cut(s)	132
AloI	GAACNNNNNNTCC	2 cut(s)	569, 601
Alw21I	GWGCWC	2 cut(s)	351, 1315
Alw26I	GTCTC	3 cut(s)	41, 281, 709
AlwI	GGATC	3 cut(s)	570, 1010, 1820
AlwNI	CAGNNNCTG	2 cut(s)	550, 1502
AoxI	GGCC	4 cut(s)	536, 571, 1028, 1093
ApeKI	GCWGC	8 cut(s)	494, 607, 734, 968, 1087, 1436, 1740, 1892
ApoI	RAATTY	6 cut(s)	341, 875, 896, 1205, 1648, 1902
Asp700I	GAANNNNTTC	1 cut(s)	1287
AspLEI	GCGC	2 cut(s)	615, 951
AspS9I	GGNCC	2 cut(s)	140, 1173
AsuC2I	CCSGG	1 cut(s)	1097
AsuHPI	GGTGA	3 cut(s)	619, 710, 1449
AvaII	GGWCC	2 cut(s)	140, 1173
BaeGI	GKGCMC	1 cut(s)	198
BanI	GGYRCC	1 cut(s)	1372
BanII	GRGCYC	1 cut(s)	1315
BauI	CACGAG	1 cut(s)	1332
BbsI	GAAGAC	3 cut(s)	48, 836, 1686
Bbv12I	GWGCWC	2 cut(s)	351, 1315
BbvCI	CCTCAGC	2 cut(s)	396, 498
BbvI	GCAGC	8 cut(s)	481, 619, 746, 980, 1099, 1423, 1727, 1904
BceAI	ACGGC	1 cut(s)	474
BciT130I	CCWGG	6 cut(s)	518, 575, 1032, 1177, 1350, 1830
BcnI	CCSGG	1 cut(s)	1097
BcoDI	GTCTC	3 cut(s)	41, 281, 709
BcuI	ACTAGT	1 cut(s)	1322
BfaI	CTAG	5 cut(s)	356, 459, 1052, 1080, 1323
BfmI	CTRYAG	3 cut(s)	1191, 1741, 1890
BglI	GCCNNNNNGGC	1 cut(s)	616
BisI	GCNGC	9 cut(s)	495, 608, 611, 735, 969, 1088, 1437, 1741, 1893
BlsI	GCNGC	9 cut(s)	496, 609, 612, 736, 970, 1089, 1438, 1742, 1894
Bme1390I	CCNGG	7 cut(s)	518, 575, 1032, 1097, 1177, 1350, 1830
Bme18I	GGWCC	2 cut(s)	140, 1173
BmgT120I	GGNCC	2 cut(s)	140, 1173
BmiI	GGNNCC	6 cut(s)	327, 908, 1036, 1231, 1345, 1374
BmrFI	CCNGG	7 cut(s)	518, 575, 1032, 1097, 1177, 1350, 1830
BmrI	ACTGGG	2 cut(s)	300, 1008
BmsI	GCATC	8 cut(s)	364, 382, 667, 805, 955, 1166, 1395, 1823
BmuI	ACTGGG	2 cut(s)	300, 1008
BpiI	GAAGAC	3 cut(s)	48, 836, 1686
BpmI	CTGGAG	4 cut(s)	596, 693, 1299, 1851
Bpu10I	CCTNAGC	2 cut(s)	396, 498
BpuMI	CCSGG	1 cut(s)	1097
Bsa29I	ATCGAT	1 cut(s)	15
BsaHI	GRCGYC	1 cut(s)	224
BsaJI	CCNNGG	5 cut(s)	516, 910, 1106, 1348, 1859
BsaWI	WCCGGW	1 cut(s)	80
Bsc4I	CCNNNNNNNGG	5 cut(s)	59, 164, 636, 1026, 1920
Bse1I	ACTGG	8 cut(s)	295, 637, 991, 996, 1003, 1143, 1211, 1937
Bse3DI	GCAATG	1 cut(s)	1494
BseBI	CCWGG	6 cut(s)	518, 575, 1032, 1177, 1350, 1830
BseCI	ATCGAT	1 cut(s)	15
BseDI	CCNNGG	5 cut(s)	516, 910, 1106, 1348, 1859
BseLI	CCNNNNNNNGG	5 cut(s)	59, 164, 636, 1026, 1920
BseMI	GCAATG	1 cut(s)	1494
BseMII	CTCAG	9 cut(s)	387, 489, 683, 704, 1013, 1248, 1494, 1758, 1821
BseNI	ACTGG	8 cut(s)	295, 637, 991, 996, 1003, 1143, 1211, 1937
BseRI	GAGGAG	6 cut(s)	50, 53, 56, 59, 919, 1668
BseSI	GKGCMC	1 cut(s)	198
BseXI	GCAGC	8 cut(s)	481, 619, 746, 980, 1099, 1423, 1727, 1904
Bsh1236I	CGCG	1 cut(s)	613
BshFI	GGCC	4 cut(s)	538, 573, 1030, 1095
BshNI	GGYRCC	1 cut(s)	1372
BshVI	ATCGAT	1 cut(s)	15
BsiHKAI	GWGCWC	2 cut(s)	351, 1315
BsiSI	CCGG	3 cut(s)	81, 221, 1096
BslFI	GGGAC	1 cut(s)	467
BslI	CCNNNNNNNGG	5 cut(s)	59, 164, 636, 1026, 1920
BsmAI	GTCTC	3 cut(s)	41, 281, 709
BsmFI	GGGAC	1 cut(s)	467
BsmI	GAATGC	1 cut(s)	1498
BsnI	GGCC	4 cut(s)	538, 573, 1030, 1095
Bsp1286I	GDGCHC	3 cut(s)	198, 351, 1315
Bsp1407I	TGTACA	1 cut(s)	1444
Bsp143I	GATC	6 cut(s)	12, 16, 235, 562, 1002, 1825
Bsp19I	CCATGG	1 cut(s)	1106
BspACI	CCGC	3 cut(s)	5, 284, 611
BspANI	GGCC	4 cut(s)	538, 573, 1030, 1095
BspCNI	CTCAG	9 cut(s)	388, 490, 684, 705, 1014, 1247, 1495, 1759, 1820
BspDI	ATCGAT	1 cut(s)	15
BspFNI	CGCG	1 cut(s)	613
BspLI	GGNNCC	6 cut(s)	327, 908, 1036, 1231, 1345, 1374
BspMAI	CTGCAG	3 cut(s)	1195, 1745, 1894
BspPI	GGATC	3 cut(s)	570, 1010, 1820
BspQI	GCTCTTC	1 cut(s)	1303
BspT107I	GGYRCC	1 cut(s)	1372
BsrDI	GCAATG	1 cut(s)	1494
BsrGI	TGTACA	1 cut(s)	1444
BsrI	ACTGG	8 cut(s)	295, 637, 991, 996, 1003, 1143, 1211, 1937
BssECI	CCNNGG	5 cut(s)	516, 910, 1106, 1348, 1859
BssMI	GATC	6 cut(s)	12, 16, 235, 562, 1002, 1825
BssNAI	GTATAC	1 cut(s)	1519
BssNI	GRCGYC	1 cut(s)	224
BssSI	CACGAG	1 cut(s)	1332
BssT1I	CCWWGG	2 cut(s)	910, 1106
Bst1107I	GTATAC	1 cut(s)	1519
Bst2BI	CACGAG	1 cut(s)	1332
Bst2UI	CCWGG	6 cut(s)	518, 575, 1032, 1177, 1350, 1830
Bst4CI	ACNGT	2 cut(s)	1764, 1863
Bst6I	CTCTTC	3 cut(s)	257, 1163, 1303
BstACI	GRCGYC	1 cut(s)	224
BstAPI	GCANNNNNTGC	1 cut(s)	1493
BstAUI	TGTACA	1 cut(s)	1444
BstC8I	GCNNGC	6 cut(s)	129, 617, 779, 865, 1085, 1485
BstDEI	CTNAG	9 cut(s)	396, 498, 692, 713, 1022, 1234, 1503, 1767, 1807
BstDSI	CCRYGG	2 cut(s)	1106, 1859
BstFNI	CGCG	1 cut(s)	613
BstHHI	GCGC	2 cut(s)	615, 951
BstKTI	GATC	6 cut(s)	15, 19, 238, 565, 1005, 1828
BstMAI	GTCTC	3 cut(s)	41, 281, 709
BstMBI	GATC	6 cut(s)	12, 16, 235, 562, 1002, 1825
BstMWI	GCNNNNNNNGC	4 cut(s)	202, 616, 1493, 1737
BstNI	CCWGG	6 cut(s)	518, 575, 1032, 1177, 1350, 1830
BstNSI	RCATGY	2 cut(s)	1664, 1781
BstSCI	CCNGG	7 cut(s)	516, 573, 1030, 1095, 1175, 1348, 1828
BstSFI	CTRYAG	3 cut(s)	1191, 1741, 1890
BstSLI	GKGCMC	1 cut(s)	198
BstUI	CGCG	1 cut(s)	613
BstV1I	GCAGC	8 cut(s)	481, 619, 746, 980, 1099, 1423, 1727, 1904
BstV2I	GAAGAC	3 cut(s)	48, 836, 1686
BstX2I	RGATCY	2 cut(s)	562, 1825
BstYI	RGATCY	2 cut(s)	562, 1825
BstZ17I	GTATAC	1 cut(s)	1519
Bsu15I	ATCGAT	1 cut(s)	15
BsuRI	GGCC	4 cut(s)	538, 573, 1030, 1095
BsuTUI	ATCGAT	1 cut(s)	15
BtgI	CCRYGG	2 cut(s)	1106, 1859
BtsIMutI	CAGTG	6 cut(s)	143, 630, 984, 1012, 1150, 1760
Cac8I	GCNNGC	6 cut(s)	129, 617, 779, 865, 1085, 1485
CaiI	CAGNNNCTG	2 cut(s)	550, 1502
CfoI	GCGC	2 cut(s)	615, 951
Cfr13I	GGNCC	2 cut(s)	140, 1173
ClaI	ATCGAT	1 cut(s)	15
CseI	GACGC	1 cut(s)	213
Csp6I	GTAC	3 cut(s)	847, 1445, 1911
CspCI	CAANNNNNGTGG	4 cut(s)	1773, 1792, 1808, 1827
CviQI	GTAC	3 cut(s)	847, 1445, 1911
DdeI	CTNAG	9 cut(s)	396, 498, 692, 713, 1022, 1234, 1503, 1767, 1807
DpnI	GATC	6 cut(s)	14, 18, 237, 564, 1004, 1827
DpnII	GATC	6 cut(s)	12, 16, 235, 562, 1002, 1825
DraI	TTTAAA	2 cut(s)	786, 943
EaeI	YGGCCR	1 cut(s)	1093
Eam1104I	CTCTTC	3 cut(s)	257, 1163, 1303
EarI	CTCTTC	3 cut(s)	257, 1163, 1303
Ecl136II	GAGCTC	1 cut(s)	1313
Eco130I	CCWWGG	2 cut(s)	910, 1106
Eco147I	AGGCCT	1 cut(s)	538
Eco24I	GRGCYC	1 cut(s)	1315
Eco47I	GGWCC	2 cut(s)	140, 1173
Eco53kI	GAGCTC	1 cut(s)	1313
Eco57I	CTGAAG	1 cut(s)	1606
EcoICRI	GAGCTC	1 cut(s)	1313
EcoRI	GAATTC	4 cut(s)	341, 875, 1648, 1902
EcoRII	CCWGG	6 cut(s)	516, 573, 1030, 1175, 1348, 1828
EcoT14I	CCWWGG	2 cut(s)	910, 1106
EcoT38I	GRGCYC	1 cut(s)	1315
ErhI	CCWWGG	2 cut(s)	910, 1106
FalI	AAGNNNNNCTT	2 cut(s)	1678, 1710
FaqI	GGGAC	1 cut(s)	467
FauNDI	CATATG	2 cut(s)	426, 1303
FblI	GTMKAC	3 cut(s)	306, 1397, 1518
Fnu4HI	GCNGC	9 cut(s)	495, 608, 611, 735, 969, 1088, 1437, 1741, 1893
FriOI	GRGCYC	1 cut(s)	1315
Fsp4HI	GCNGC	9 cut(s)	495, 608, 611, 735, 969, 1088, 1437, 1741, 1893
FspBI	CTAG	5 cut(s)	356, 459, 1052, 1080, 1323
GlaI	GCGC	2 cut(s)	614, 950
GluI	GCNGC	9 cut(s)	495, 608, 611, 735, 969, 1088, 1437, 1741, 1893
GsuI	CTGGAG	4 cut(s)	596, 693, 1299, 1851
HaeIII	GGCC	4 cut(s)	538, 573, 1030, 1095
HapII	CCGG	3 cut(s)	81, 221, 1096
HgaI	GACGC	1 cut(s)	213
HhaI	GCGC	2 cut(s)	615, 951
Hin1I	GRCGYC	1 cut(s)	224
Hin6I	GCGC	2 cut(s)	613, 949
HinP1I	GCGC	2 cut(s)	613, 949
HincII	GTYRAC	1 cut(s)	530
HindII	GTYRAC	1 cut(s)	530
HindIII	AAGCTT	2 cut(s)	747, 1378
HinfI	GANTC	7 cut(s)	49, 1016, 1247, 1257, 1353, 1574, 1746
HpaII	CCGG	3 cut(s)	81, 221, 1096
HphI	GGTGA	3 cut(s)	619, 710, 1449
Hpy166II	GTNNAC	9 cut(s)	307, 530, 652, 847, 1398, 1519, 1613, 1795, 1961
Hpy188III	TCNNGA	6 cut(s)	329, 672, 1261, 1280, 1334, 1712
Hpy8I	GTNNAC	9 cut(s)	307, 530, 652, 847, 1398, 1519, 1613, 1795, 1961
Hpy99I	CGWCG	3 cut(s)	34, 70, 229
HpyAV	CCTTC	6 cut(s)	356, 549, 723, 931, 1258, 1625
HpyCH4III	ACNGT	2 cut(s)	1764, 1863
HpyCH4IV	ACGT	1 cut(s)	843
HpyF10VI	GCNNNNNNNGC	4 cut(s)	202, 616, 1493, 1737
HpyF3I	CTNAG	9 cut(s)	396, 498, 692, 713, 1022, 1234, 1503, 1767, 1807
HpySE526I	ACGT	1 cut(s)	843
Hsp92I	GRCGYC	1 cut(s)	224
HspAI	GCGC	2 cut(s)	613, 949
Kzo9I	GATC	6 cut(s)	12, 16, 235, 562, 1002, 1825
LguI	GCTCTTC	1 cut(s)	1303
Lsp1109I	GCAGC	8 cut(s)	481, 619, 746, 980, 1099, 1423, 1727, 1904
LweI	GCATC	8 cut(s)	364, 382, 667, 805, 955, 1166, 1395, 1823
MaeI	CTAG	5 cut(s)	356, 459, 1052, 1080, 1323
MaeII	ACGT	1 cut(s)	843
MaeIII	GTNAC	1 cut(s)	994
MalI	GATC	6 cut(s)	14, 18, 237, 564, 1004, 1827
MboI	GATC	6 cut(s)	12, 16, 235, 562, 1002, 1825
MflI	RGATCY	2 cut(s)	562, 1825
MhlI	GDGCHC	3 cut(s)	198, 351, 1315
MlyI	GAGTC	2 cut(s)	43, 1740
MmeI	TCCRAC	4 cut(s)	788, 993, 1207, 1879
MroXI	GAANNNNTTC	1 cut(s)	1287
MseI	TTAA	6 cut(s)	273, 785, 840, 942, 1151, 1253
MslI	CAYNNNNRTG	1 cut(s)	132
MspI	CCGG	3 cut(s)	81, 221, 1096
MspR9I	CCNGG	7 cut(s)	518, 575, 1032, 1097, 1177, 1350, 1830
Mva1269I	GAATGC	1 cut(s)	1498
MvaI	CCWGG	6 cut(s)	518, 575, 1032, 1177, 1350, 1830
MvnI	CGCG	1 cut(s)	613
MwoI	GCNNNNNNNGC	4 cut(s)	202, 616, 1493, 1737
NciI	CCSGG	1 cut(s)	1097
NcoI	CCATGG	1 cut(s)	1106
NdeI	CATATG	2 cut(s)	426, 1303
NdeII	GATC	6 cut(s)	12, 16, 235, 562, 1002, 1825
NlaIV	GGNNCC	6 cut(s)	327, 908, 1036, 1231, 1345, 1374
NmeAIII	GCCGAG	1 cut(s)	284
NspI	RCATGY	2 cut(s)	1664, 1781
OliI	CACNNNNGTG	1 cut(s)	132
PceI	AGGCCT	1 cut(s)	538
PciSI	GCTCTTC	1 cut(s)	1303
PctI	GAATGC	1 cut(s)	1498
PdmI	GAANNNNTTC	1 cut(s)	1287
PfeI	GAWTC	5 cut(s)	1016, 1247, 1257, 1353, 1574
PflFI	GACNNNGTC	1 cut(s)	52
PflMI	CCANNNNNTGG	2 cut(s)	636, 1920
PfoI	TCCNGGA	2 cut(s)	1175, 1828
PkrI	GCNGC	9 cut(s)	496, 609, 612, 736, 970, 1089, 1438, 1742, 1894
PleI	GAGTC	2 cut(s)	43, 1740
PpsI	GAGTC	2 cut(s)	43, 1740
Psp124BI	GAGCTC	1 cut(s)	1315
Psp6I	CCWGG	6 cut(s)	516, 573, 1030, 1175, 1348, 1828
PspGI	CCWGG	6 cut(s)	516, 573, 1030, 1175, 1348, 1828
PspN4I	GGNNCC	6 cut(s)	327, 908, 1036, 1231, 1345, 1374
PspPI	GGNCC	2 cut(s)	140, 1173
PstI	CTGCAG	3 cut(s)	1195, 1745, 1894
PstNI	CAGNNNCTG	2 cut(s)	550, 1502
PsuI	RGATCY	2 cut(s)	562, 1825
PsyI	GACNNNGTC	1 cut(s)	52
RsaI	GTAC	3 cut(s)	848, 1446, 1912
RsaNI	GTAC	3 cut(s)	847, 1445, 1911
RseI	CAYNNNNRTG	1 cut(s)	132
SacI	GAGCTC	1 cut(s)	1315
SapI	GCTCTTC	1 cut(s)	1303
SaqAI	TTAA	6 cut(s)	273, 785, 840, 942, 1151, 1253
SatI	GCNGC	9 cut(s)	495, 608, 611, 735, 969, 1088, 1437, 1741, 1893
Sau3AI	GATC	6 cut(s)	12, 16, 235, 562, 1002, 1825
Sau96I	GGNCC	2 cut(s)	140, 1173
SchI	GAGTC	2 cut(s)	43, 1740
ScrFI	CCNGG	7 cut(s)	518, 575, 1032, 1097, 1177, 1350, 1830
SduI	GDGCHC	3 cut(s)	198, 351, 1315
SfaNI	GCATC	8 cut(s)	364, 382, 667, 805, 955, 1166, 1395, 1823
SfcI	CTRYAG	3 cut(s)	1191, 1741, 1890
SinI	GGWCC	2 cut(s)	140, 1173
SmiMI	CAYNNNNRTG	1 cut(s)	132
SpeI	ACTAGT	1 cut(s)	1322
SseBI	AGGCCT	1 cut(s)	538
SsiI	CCGC	3 cut(s)	5, 284, 611
SspI	AATATT	1 cut(s)	1287
SspMI	CTAG	5 cut(s)	356, 459, 1052, 1080, 1323
SstI	GAGCTC	1 cut(s)	1315
StuI	AGGCCT	1 cut(s)	538
StyD4I	CCNGG	7 cut(s)	516, 573, 1030, 1095, 1175, 1348, 1828
StyI	CCWWGG	2 cut(s)	910, 1106
TaaI	ACNGT	2 cut(s)	1764, 1863
TaiI	ACGT	1 cut(s)	846
TaqI	TCGA	4 cut(s)	15, 267, 345, 413
TatI	WGTACW	2 cut(s)	846, 1444
TauI	GCSGC	1 cut(s)	613
TfiI	GAWTC	5 cut(s)	1016, 1247, 1257, 1353, 1574
Tru1I	TTAA	6 cut(s)	273, 785, 840, 942, 1151, 1253
Tru9I	TTAA	6 cut(s)	273, 785, 840, 942, 1151, 1253
TscAI	CASTG	6 cut(s)	150, 637, 991, 1012, 1150, 1767
TseI	GCWGC	8 cut(s)	494, 607, 734, 968, 1087, 1436, 1740, 1892
TspDTI	ATGAA	8 cut(s)	315, 842, 868, 1505, 1661, 1686, 1713, 1856
TspGWI	ACGGA	4 cut(s)	42, 47, 1504, 1630
TspRI	CASTG	6 cut(s)	150, 637, 991, 1012, 1150, 1767
Tth111I	GACNNNGTC	1 cut(s)	52
Van91I	CCANNNNNTGG	2 cut(s)	636, 1920
VpaK11BI	GGWCC	2 cut(s)	140, 1173
XapI	RAATTY	6 cut(s)	341, 875, 896, 1205, 1648, 1902
XceI	RCATGY	2 cut(s)	1664, 1781
XcmI	CCANNNNNNNNNTGG	2 cut(s)	287, 1150
XmiI	GTMKAC	3 cut(s)	306, 1397, 1518
XmnI	GAANNNNTTC	1 cut(s)	1287
XspI	CTAG	5 cut(s)	356, 459, 1052, 1080, 1323

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.