zinc finger CCCH domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 |
| malus_domestica | MD05G1311700.v1.1 MD10G1291300.v1.1 |
| prunus_persica | Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 |
| pyrus_communis | pycom05g28780 pycom10g24340 |
| rosa_chinensis | RchiOBHm_Chr5g0008951 |
| rosa_laevigata | RLG00000031619 |
| rosa_multiflora | Rmu_sc0004677.1_g000020 |
| rosa_roxburghii | Rroxscaffold_1G00067070 Rroxscaffold_1G00067700 |
| rosa_rugosa | Rorug04G0440500 Rorug04G0440500 |
| rosa_samantha | Rh5AG069200 Rh5BG066000 Rh5CG077000 Rh5DG065000 |
| rosa_wichuraiana | Rw5G006460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 39 |
| AccI | GTMKAC | 2 cut(s) | 1707, 2043 |
| AciI | CCGC | 4 cut(s) | 198, 299, 314, 1191 |
| AclWI | GGATC | 1 cut(s) | 545 |
| AcsI | RAATTY | 4 cut(s) | 133, 1344, 1859, 2076 |
| AcuI | CTGAAG | 2 cut(s) | 258, 1524 |
| AcvI | CACGTG | 1 cut(s) | 1655 |
| AfaI | GTAC | 7 cut(s) | 280, 304, 613, 1374, 1542, 1771, 1911 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 28, 869 |
| AflIII | ACRYGT | 1 cut(s) | 1652 |
| AjnI | CCWGG | 3 cut(s) | 87, 211, 754 |
| Alw21I | GWGCWC | 2 cut(s) | 1074, 1951 |
| Alw26I | GTCTC | 6 cut(s) | 160, 536, 540, 1054, 1679, 2006 |
| Alw44I | GTGCAC | 1 cut(s) | 1070 |
| AlwI | GGATC | 1 cut(s) | 545 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1553, 1794 |
| Ama87I | CYCGRG | 1 cut(s) | 95 |
| AoxI | GGCC | 3 cut(s) | 245, 1568, 1747 |
| ApaLI | GTGCAC | 1 cut(s) | 1070 |
| ApeKI | GCWGC | 6 cut(s) | 506, 680, 683, 686, 1528, 1644 |
| ApoI | RAATTY | 4 cut(s) | 133, 1344, 1859, 2076 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1586, 1618 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1937 |
| AspLEI | GCGC | 3 cut(s) | 34, 40, 324 |
| AspS9I | GGNCC | 4 cut(s) | 209, 1173, 1569, 1747 |
| AsuC2I | CCSGG | 2 cut(s) | 825, 1943 |
| AsuHPI | GGTGA | 8 cut(s) | 884, 919, 1080, 1088, 1659, 1811, 1826, 1898 |
| AvaI | CYCGRG | 1 cut(s) | 95 |
| AvaII | GGWCC | 2 cut(s) | 209, 1173 |
| AxyI | CCTNAGG | 1 cut(s) | 669 |
| BaeGI | GKGCMC | 1 cut(s) | 1074 |
| BbrPI | CACGTG | 1 cut(s) | 1655 |
| BbsI | GAAGAC | 3 cut(s) | 60, 66, 1596 |
| Bbv12I | GWGCWC | 2 cut(s) | 1074, 1951 |
| BbvI | GCAGC | 6 cut(s) | 493, 667, 670, 673, 1515, 1631 |
| BccI | CCATC | 8 cut(s) | 259, 473, 840, 1285, 1375, 1393, 1814, 1895 |
| BceAI | ACGGC | 3 cut(s) | 1143, 2024, 2106 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 569, 603 |
| BciT130I | CCWGG | 3 cut(s) | 89, 213, 756 |
| BclI | TGATCA | 2 cut(s) | 955, 1078 |
| BcnI | CCSGG | 2 cut(s) | 825, 1943 |
| BcoDI | GTCTC | 6 cut(s) | 160, 536, 540, 1054, 1679, 2006 |
| BfoI | RGCGCY | 1 cut(s) | 35 |
| BglII | AGATCT | 1 cut(s) | 1042 |
| BisI | GCNGC | 7 cut(s) | 315, 507, 681, 684, 687, 1529, 1645 |
| BlsI | GCNGC | 7 cut(s) | 316, 508, 682, 685, 688, 1530, 1646 |
| Bme1390I | CCNGG | 5 cut(s) | 89, 213, 756, 825, 1943 |
| Bme18I | GGWCC | 2 cut(s) | 209, 1173 |
| BmeT110I | CYCGRG | 1 cut(s) | 95 |
| BmgT120I | GGNCC | 4 cut(s) | 209, 1173, 1569, 1747 |
| BmiI | GGNNCC | 5 cut(s) | 210, 861, 1365, 1571, 1720 |
| BmrFI | CCNGG | 5 cut(s) | 89, 213, 756, 825, 1943 |
| BmsI | GCATC | 8 cut(s) | 352, 441, 667, 820, 1201, 1540, 1573, 2002 |
| BpiI | GAAGAC | 3 cut(s) | 60, 66, 1596 |
| BpmI | CTGGAG | 1 cut(s) | 1071 |
| BpuEI | CTTGAG | 1 cut(s) | 1740 |
| BpuMI | CCSGG | 2 cut(s) | 825, 1943 |
| BsaAI | YACGTR | 1 cut(s) | 1655 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1215 |
| BsaJI | CCNNGG | 2 cut(s) | 823, 1942 |
| BsaWI | WCCGGW | 1 cut(s) | 1175 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1051, 1081 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 28, 869 |
| Bse1I | ACTGG | 3 cut(s) | 777, 783, 1144 |
| Bse21I | CCTNAGG | 1 cut(s) | 669 |
| Bse3DI | GCAATG | 3 cut(s) | 209, 317, 1184 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1215 |
| BseBI | CCWGG | 3 cut(s) | 89, 213, 756 |
| BseDI | CCNNGG | 2 cut(s) | 823, 1942 |
| BseGI | GGATG | 8 cut(s) | 115, 627, 658, 946, 958, 1216, 1912, 2017 |
| BseJI | GATNNNNATC | 1 cut(s) | 1215 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 28, 869 |
| BseMI | GCAATG | 3 cut(s) | 209, 317, 1184 |
| BseMII | CTCAG | 6 cut(s) | 347, 504, 531, 660, 729, 2017 |
| BseNI | ACTGG | 3 cut(s) | 777, 783, 1144 |
| BseRI | GAGGAG | 1 cut(s) | 872 |
| BseSI | GKGCMC | 1 cut(s) | 1074 |
| BseXI | GCAGC | 6 cut(s) | 493, 667, 670, 673, 1515, 1631 |
| BseYI | CCCAGC | 3 cut(s) | 565, 1517, 1573 |
| BsgI | GTGCAG | 1 cut(s) | 908 |
| BshFI | GGCC | 3 cut(s) | 247, 1570, 1749 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1074, 1951 |
| BsiHKCI | CYCGRG | 1 cut(s) | 95 |
| BsiSI | CCGG | 4 cut(s) | 29, 825, 1176, 1942 |
| BslFI | GGGAC | 6 cut(s) | 204, 222, 535, 806, 1576, 1856 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 28, 869 |
| BsmAI | GTCTC | 6 cut(s) | 160, 536, 540, 1054, 1679, 2006 |
| BsmBI | CGTCTC | 1 cut(s) | 160 |
| BsmFI | GGGAC | 6 cut(s) | 204, 222, 535, 806, 1576, 1856 |
| BsnI | GGCC | 3 cut(s) | 247, 1570, 1749 |
| BsoBI | CYCGRG | 1 cut(s) | 95 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1074, 1951 |
| Bsp1407I | TGTACA | 1 cut(s) | 1909 |
| Bsp143I | GATC | 8 cut(s) | 415, 500, 550, 743, 913, 955, 1042, 1078 |
| BspACI | CCGC | 4 cut(s) | 198, 299, 314, 1191 |
| BspANI | GGCC | 3 cut(s) | 247, 1570, 1749 |
| BspCNI | CTCAG | 6 cut(s) | 346, 505, 532, 661, 730, 2016 |
| BspHI | TCATGA | 1 cut(s) | 763 |
| BspLI | GGNNCC | 5 cut(s) | 210, 861, 1365, 1571, 1720 |
| BspPI | GGATC | 1 cut(s) | 545 |
| BspQI | GCTCTTC | 1 cut(s) | 223 |
| BsrDI | GCAATG | 3 cut(s) | 209, 317, 1184 |
| BsrGI | TGTACA | 1 cut(s) | 1909 |
| BsrI | ACTGG | 3 cut(s) | 777, 783, 1144 |
| BssECI | CCNNGG | 2 cut(s) | 823, 1942 |
| BssMI | GATC | 8 cut(s) | 415, 500, 550, 743, 913, 955, 1042, 1078 |
| Bst2UI | CCWGG | 3 cut(s) | 89, 213, 756 |
| Bst4CI | ACNGT | 4 cut(s) | 1076, 1312, 1555, 1690 |
| Bst6I | CTCTTC | 3 cut(s) | 223, 1024, 1446 |
| BstAUI | TGTACA | 1 cut(s) | 1909 |
| BstBAI | YACGTR | 1 cut(s) | 1655 |
| BstC8I | GCNNGC | 5 cut(s) | 36, 200, 1191, 1579, 2119 |
| BstDEI | CTNAG | 9 cut(s) | 333, 513, 540, 669, 725, 738, 1240, 2003, 2054 |
| BstF5I | GGATG | 8 cut(s) | 115, 627, 658, 946, 958, 1216, 1912, 2017 |
| BstH2I | RGCGCY | 1 cut(s) | 35 |
| BstHHI | GCGC | 3 cut(s) | 34, 40, 324 |
| BstKTI | GATC | 8 cut(s) | 418, 503, 553, 746, 916, 958, 1045, 1081 |
| BstMAI | GTCTC | 6 cut(s) | 160, 536, 540, 1054, 1679, 2006 |
| BstMBI | GATC | 8 cut(s) | 415, 500, 550, 743, 913, 955, 1042, 1078 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 328, 686, 1583 |
| BstNI | CCWGG | 3 cut(s) | 89, 213, 756 |
| BstSCI | CCNGG | 5 cut(s) | 87, 211, 754, 823, 1941 |
| BstSLI | GKGCMC | 1 cut(s) | 1074 |
| BstV1I | GCAGC | 6 cut(s) | 493, 667, 670, 673, 1515, 1631 |
| BstV2I | GAAGAC | 3 cut(s) | 60, 66, 1596 |
| BstX2I | RGATCY | 1 cut(s) | 1042 |
| BstYI | RGATCY | 1 cut(s) | 1042 |
| Bsu36I | CCTNAGG | 1 cut(s) | 669 |
| BsuRI | GGCC | 3 cut(s) | 247, 1570, 1749 |
| BtgZI | GCGATG | 1 cut(s) | 1596 |
| BtsCI | GGATG | 8 cut(s) | 115, 627, 658, 946, 958, 1216, 1912, 2017 |
| BtsIMutI | CAGTG | 3 cut(s) | 770, 790, 1695 |
| Cac8I | GCNNGC | 5 cut(s) | 36, 200, 1191, 1579, 2119 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1553, 1794 |
| CciI | TCATGA | 1 cut(s) | 763 |
| CfoI | GCGC | 3 cut(s) | 34, 40, 324 |
| Cfr13I | GGNCC | 4 cut(s) | 209, 1173, 1569, 1747 |
| Csp6I | GTAC | 7 cut(s) | 279, 303, 612, 1373, 1541, 1770, 1910 |
| CviAII | CATG | 5 cut(s) | 121, 419, 618, 764, 1262 |
| CviQI | GTAC | 7 cut(s) | 279, 303, 612, 1373, 1541, 1770, 1910 |
| DdeI | CTNAG | 9 cut(s) | 333, 513, 540, 669, 725, 738, 1240, 2003, 2054 |
| DpnI | GATC | 8 cut(s) | 417, 502, 552, 745, 915, 957, 1044, 1080 |
| DpnII | GATC | 8 cut(s) | 415, 500, 550, 743, 913, 955, 1042, 1078 |
| Eam1104I | CTCTTC | 3 cut(s) | 223, 1024, 1446 |
| EarI | CTCTTC | 3 cut(s) | 223, 1024, 1446 |
| Eco47I | GGWCC | 2 cut(s) | 209, 1173 |
| Eco57I | CTGAAG | 2 cut(s) | 258, 1524 |
| Eco72I | CACGTG | 1 cut(s) | 1655 |
| Eco81I | CCTNAGG | 1 cut(s) | 669 |
| Eco88I | CYCGRG | 1 cut(s) | 95 |
| EcoRII | CCWGG | 3 cut(s) | 87, 211, 754 |
| Esp3I | CGTCTC | 1 cut(s) | 160 |
| FaeI | CATG | 5 cut(s) | 124, 422, 621, 767, 1265 |
| FaqI | GGGAC | 6 cut(s) | 204, 222, 535, 806, 1576, 1856 |
| FatI | CATG | 5 cut(s) | 120, 418, 617, 763, 1261 |
| FauI | CCCGC | 3 cut(s) | 191, 292, 1198 |
| FbaI | TGATCA | 2 cut(s) | 955, 1078 |
| FblI | GTMKAC | 2 cut(s) | 1707, 2043 |
| Fnu4HI | GCNGC | 7 cut(s) | 315, 507, 681, 684, 687, 1529, 1645 |
| FokI | GGATG | 8 cut(s) | 122, 614, 645, 953, 965, 1203, 1919, 2024 |
| Fsp4HI | GCNGC | 7 cut(s) | 315, 507, 681, 684, 687, 1529, 1645 |
| FspI | TGCGCA | 1 cut(s) | 39 |
| GlaI | GCGC | 3 cut(s) | 33, 39, 323 |
| GluI | GCNGC | 7 cut(s) | 315, 507, 681, 684, 687, 1529, 1645 |
| GsaI | CCCAGC | 3 cut(s) | 569, 1521, 1577 |
| GsuI | CTGGAG | 1 cut(s) | 1071 |
| HaeII | RGCGCY | 1 cut(s) | 35 |
| HaeIII | GGCC | 3 cut(s) | 247, 1570, 1749 |
| HapII | CCGG | 4 cut(s) | 29, 825, 1176, 1942 |
| HhaI | GCGC | 3 cut(s) | 34, 40, 324 |
| Hin1II | CATG | 5 cut(s) | 124, 422, 621, 767, 1265 |
| Hin6I | GCGC | 3 cut(s) | 32, 38, 322 |
| HinP1I | GCGC | 3 cut(s) | 32, 38, 322 |
| HincII | GTYRAC | 2 cut(s) | 85, 118 |
| HindII | GTYRAC | 2 cut(s) | 85, 118 |
| HindIII | AAGCTT | 2 cut(s) | 1488, 2138 |
| HpaII | CCGG | 4 cut(s) | 29, 825, 1176, 1942 |
| HphI | GGTGA | 8 cut(s) | 884, 919, 1080, 1088, 1659, 1811, 1826, 1898 |
| Hpy166II | GTNNAC | 7 cut(s) | 85, 118, 471, 1072, 1708, 1889, 2044 |
| Hpy8I | GTNNAC | 7 cut(s) | 85, 118, 471, 1072, 1708, 1889, 2044 |
| Hpy99I | CGWCG | 3 cut(s) | 17, 20, 53 |
| HpyAV | CCTTC | 8 cut(s) | 703, 713, 943, 1499, 1531, 1621, 1877, 1988 |
| HpyCH4III | ACNGT | 4 cut(s) | 1076, 1312, 1555, 1690 |
| HpyCH4IV | ACGT | 1 cut(s) | 1654 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 328, 686, 1583 |
| HpyF3I | CTNAG | 9 cut(s) | 333, 513, 540, 669, 725, 738, 1240, 2003, 2054 |
| HpySE526I | ACGT | 1 cut(s) | 1654 |
| Hsp92II | CATG | 5 cut(s) | 124, 422, 621, 767, 1265 |
| HspAI | GCGC | 3 cut(s) | 32, 38, 322 |
| Ksp22I | TGATCA | 2 cut(s) | 955, 1078 |
| Kzo9I | GATC | 8 cut(s) | 415, 500, 550, 743, 913, 955, 1042, 1078 |
| LguI | GCTCTTC | 1 cut(s) | 223 |
| LmnI | GCTCC | 2 cut(s) | 859, 1363 |
| Lsp1109I | GCAGC | 6 cut(s) | 493, 667, 670, 673, 1515, 1631 |
| LweI | GCATC | 8 cut(s) | 352, 441, 667, 820, 1201, 1540, 1573, 2002 |
| MaeII | ACGT | 1 cut(s) | 1654 |
| MaeIII | GTNAC | 5 cut(s) | 1458, 1655, 1672, 1832, 2098 |
| MalI | GATC | 8 cut(s) | 417, 502, 552, 745, 915, 957, 1044, 1080 |
| MboI | GATC | 8 cut(s) | 415, 500, 550, 743, 913, 955, 1042, 1078 |
| MfeI | CAATTG | 2 cut(s) | 570, 1357 |
| MflI | RGATCY | 1 cut(s) | 1042 |
| MhlI | GDGCHC | 2 cut(s) | 1074, 1951 |
| MlyI | GAGTC | 5 cut(s) | 2, 738, 828, 1558, 1928 |
| MmeI | TCCRAC | 3 cut(s) | 36, 72, 1405 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1937 |
| MseI | TTAA | 5 cut(s) | 180, 1335, 1895, 1976, 2031 |
| MslI | CAYNNNNRTG | 3 cut(s) | 159, 909, 1815 |
| MspA1I | CMGCKG | 2 cut(s) | 506, 1644 |
| MspI | CCGG | 4 cut(s) | 29, 825, 1176, 1942 |
| MspR9I | CCNGG | 5 cut(s) | 89, 213, 756, 825, 1943 |
| MunI | CAATTG | 2 cut(s) | 570, 1357 |
| MvaI | CCWGG | 3 cut(s) | 89, 213, 756 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 328, 686, 1583 |
| NciI | CCSGG | 2 cut(s) | 825, 1943 |
| NdeII | GATC | 8 cut(s) | 415, 500, 550, 743, 913, 955, 1042, 1078 |
| NlaIII | CATG | 5 cut(s) | 124, 422, 621, 767, 1265 |
| NlaIV | GGNNCC | 5 cut(s) | 210, 861, 1365, 1571, 1720 |
| NmeAIII | GCCGAG | 1 cut(s) | 1546 |
| NmuCI | GTSAC | 2 cut(s) | 1655, 1832 |
| NsbI | TGCGCA | 1 cut(s) | 39 |
| PaeR7I | CTCGAG | 1 cut(s) | 95 |
| PagI | TCATGA | 1 cut(s) | 763 |
| PciSI | GCTCTTC | 1 cut(s) | 223 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 63 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1937 |
| PfeI | GAWTC | 8 cut(s) | 142, 370, 407, 494, 875, 1738, 1802, 2050 |
| PkrI | GCNGC | 7 cut(s) | 316, 508, 682, 685, 688, 1530, 1646 |
| PleI | GAGTC | 5 cut(s) | 2, 737, 827, 1558, 1927 |
| PmaCI | CACGTG | 1 cut(s) | 1655 |
| PmlI | CACGTG | 1 cut(s) | 1655 |
| PpsI | GAGTC | 5 cut(s) | 2, 737, 827, 1558, 1927 |
| Ppu21I | YACGTR | 1 cut(s) | 1655 |
| Psp6I | CCWGG | 3 cut(s) | 87, 211, 754 |
| PspCI | CACGTG | 1 cut(s) | 1655 |
| PspFI | CCCAGC | 3 cut(s) | 565, 1517, 1573 |
| PspGI | CCWGG | 3 cut(s) | 87, 211, 754 |
| PspN4I | GGNNCC | 5 cut(s) | 210, 861, 1365, 1571, 1720 |
| PspPI | GGNCC | 4 cut(s) | 209, 1173, 1569, 1747 |
| PspXI | VCTCGAGB | 1 cut(s) | 95 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1553, 1794 |
| PsuI | RGATCY | 1 cut(s) | 1042 |
| PvuII | CAGCTG | 2 cut(s) | 506, 1644 |
| RsaI | GTAC | 7 cut(s) | 280, 304, 613, 1374, 1542, 1771, 1911 |
| RsaNI | GTAC | 7 cut(s) | 279, 303, 612, 1373, 1541, 1770, 1910 |
| RseI | CAYNNNNRTG | 3 cut(s) | 159, 909, 1815 |
| SapI | GCTCTTC | 1 cut(s) | 223 |
| SaqAI | TTAA | 5 cut(s) | 180, 1335, 1895, 1976, 2031 |
| SatI | GCNGC | 7 cut(s) | 315, 507, 681, 684, 687, 1529, 1645 |
| Sau3AI | GATC | 8 cut(s) | 415, 500, 550, 743, 913, 955, 1042, 1078 |
| Sau96I | GGNCC | 4 cut(s) | 209, 1173, 1569, 1747 |
| SchI | GAGTC | 5 cut(s) | 2, 738, 828, 1558, 1928 |
| ScrFI | CCNGG | 5 cut(s) | 89, 213, 756, 825, 1943 |
| SduI | GDGCHC | 2 cut(s) | 1074, 1951 |
| SfaNI | GCATC | 8 cut(s) | 352, 441, 667, 820, 1201, 1540, 1573, 2002 |
| Sfr274I | CTCGAG | 1 cut(s) | 95 |
| SinI | GGWCC | 2 cut(s) | 209, 1173 |
| SlaI | CTCGAG | 1 cut(s) | 95 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 159, 909, 1815 |
| SmlI | CTYRAG | 2 cut(s) | 95, 1755 |
| SmoI | CTYRAG | 2 cut(s) | 95, 1755 |
| SsiI | CCGC | 4 cut(s) | 198, 299, 314, 1191 |
| StyD4I | CCNGG | 5 cut(s) | 87, 211, 754, 823, 1941 |
| TaaI | ACNGT | 4 cut(s) | 1076, 1312, 1555, 1690 |
| TaiI | ACGT | 1 cut(s) | 1657 |
| TaqI | TCGA | 3 cut(s) | 75, 96, 497 |
| TatI | WGTACW | 2 cut(s) | 1769, 1909 |
| TauI | GCSGC | 1 cut(s) | 317 |
| TfiI | GAWTC | 8 cut(s) | 142, 370, 407, 494, 875, 1738, 1802, 2050 |
| Tru1I | TTAA | 5 cut(s) | 180, 1335, 1895, 1976, 2031 |
| Tru9I | TTAA | 5 cut(s) | 180, 1335, 1895, 1976, 2031 |
| TscAI | CASTG | 3 cut(s) | 777, 790, 1695 |
| TseFI | GTSAC | 2 cut(s) | 1655, 1832 |
| TseI | GCWGC | 6 cut(s) | 506, 680, 683, 686, 1528, 1644 |
| Tsp45I | GTSAC | 2 cut(s) | 1655, 1832 |
| TspDTI | ATGAA | 9 cut(s) | 126, 140, 606, 616, 732, 752, 1173, 1890, 1946 |
| TspRI | CASTG | 3 cut(s) | 777, 790, 1695 |
| VneI | GTGCAC | 1 cut(s) | 1070 |
| VpaK11BI | GGWCC | 2 cut(s) | 209, 1173 |
| XapI | RAATTY | 4 cut(s) | 133, 1344, 1859, 2076 |
| XbaI | TCTAGA | 3 cut(s) | 1229, 1805, 2089 |
| XhoI | CTCGAG | 1 cut(s) | 95 |
| XmiI | GTMKAC | 2 cut(s) | 1707, 2043 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1937 |