Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0003690

Physical Location & Seq

Genomic Coordinates Forward (+)

88970877 .. 88974545

Gene Structure 3669 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00067700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2274 bp

ATGTCTGACTCCGACGACGCCCAATCTCCGGCGCTCGCGCAGCTCGACGACGACGACGACGAAGACCCCGAAGAACTCGAACAAGTAGACCAAGAACTGGAAGAAGAGAGGGATGAAGTTGACATGGATATCTCAAATTCACCAATTCAAGCACATCACAGAGGCGTTTGTGGTTTAGATGATAGACGAGAAGATATTAAGTTTGAGGGAATTGGCGGGCACTCGGGACGAGGCTCTTCTACATGGGGGAAATCTGAAGCAAGGCCACCATCTAACACACTTGATATGGAAGAAAGTACGAGTAATTCCAATTTTTCTGGTACTTCAAATGAGCCATTACGCTTGAAGTCCCAGAAAACTTTTGCTGGTGCTGGAGAATGTAGAAGCCAAGAATTTGCTGAAAATGATGCTAGGATTCTTTCTGGAAAGAAAACCTCTACACACCATACTGAATCACATGCTAATGTCAAGAATGTTATCAATTCAGAGGATGAGATGAAACAAGTGGTACAGTCTACGAATGATAGAAAGAAAATGGAATCAAGGTTCTCCAGATCAGCTGCTTCTGAGATAGGGACACATATAACATCTCCTCTTGCTGAGACTAATGATCCAAACAAACGCCCAGCAATTGTCTGCGACTTTTACGCCAAAGGTTGGTGCATTAGAGGTACTTCATGTAGGTTTATCCATACAAAAGATAGTCCAAAGAATAGTCATCCACAACCTGAGGGAGATGTTGCTGCTGCAAGTTGCAGTAGAGAAGTCAAGGTTGTTGAAGGTCCAAGAGGCATTCATGAGAGATCAAGATTGCCTGGTTTTCATGACCCACTGGCTTCTTCTAGTGGAAATGGTTTTCCATTTTCCTCACATCTAGGAATCCCAAGACGCCATCAGTTTCAATCAGTTCAACGTGAGGAATCAAATGTGGGTGATTCCGCTGATGTCCAGAAATTGCATTTACCCAAAGATGATCTAGCATTTCCTACCTCCTATAAGGATGTAGAAAAGGATGGTCAGATACGAAATTGGCCTGCTGATGATTTTAACAATTCACCTAATAAAAAAGGCAGGTACTCTATAGGAAATACCTCTTCTCATTCAAGCAGTATGGAGGATTTGGCTGGAGTTTGGAGACAACGTGTGCACAGTGATCATACTTCACTTGTGAGCCATTCCTTGAATAGCTCAAATACTCTTATAGCTACTGGCTTGTTCCCAAGTAGCCGTATTTCAACTTGGAATGGATTTTCATTGCCCGCAAGTTATTCCAGTTTAGATGCAAATCCTCTGGGTTCTAAAAAGCTCTTAGACAGCAATAGGGATTATCATGCTTATACTAGATCATCTGCCTTTCTGAAAAGCTCTTCTCCCTTCAGTAGTTCTGAACTGAACAACTTTCCCCCAATCAGCATTTCACAGCACTCTGCTGAACTTAAAACAAAAAATTCTTCAAACAATTGGGAGCCATCTGTACCCTTCCGGCCATCTTTTATTCTTCCTTCTGATTTTCTATCATTTTCAGCAAAGCAGTATGACCCTCTTTGCGGTAGCATTGAGTTACCCAAGTTAGCTAACAACTCCTTTGAAGCTTTCTACTCTGAAGGGGCAACTGTTGGGAATAGACTGCATCAGAAAGTACTTCCTGAAACTGTCAGTGGAACTCTTCCCCCAGCTTGCAATGCTGATACAAACTCCATGTCTTCTCATAATACATATCATGAGAAGGTATTAGATAACAGCTGCTATACACGTGACCCTAATTCACCTGTAACTGAAGCAGAGACAGTGGGGACTTCTGTTGTCTACCAAAATGGAACCTTGACTAAGGACGAGAATCCCTTGGGCCACTCTCAAGTCAAAGGTAGTACAAATCCAAACAAAATCAGTATCTATGGTGATTCTAGGCAAAAAAGTGATGGTTCTAGTCAACAAAGGGACATAAAAGTAGATAGATTTAGAGAAAACAATGAAGCTGAAGTTGAACATTTAACAGATGGGGATGTACAACAAGAGTCAAAAGAAATGAGGCAATTCCGGGCTGCTCTTATAGAATTAGTGAAAGAGTTATTAAAACCAAAATGGCGTGAAGGTAGTCTCAGCAAGGATGCACACAACAAGATAGTTAAGAAAGCAGTAGACAAGATTCTCAGTGCTTTTCAGCCCCAACAAATCCCACCTACTATAGAAGCAGTTACGCAATATCTGTCTGCTTGCCGTCCAAAAATCTCAAAGCTTGTTGAGGGATATATCGAGAGATATGGCAAGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0010219 GO:0010220 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0065007 GO:0080134

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

757

Amino Acids

83.71

Weight (kDa)

5.79

Isoelectric Point (pI)

49.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003690)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810
malus_domestica	MD05G1311700.v1.1 MD10G1291300.v1.1
prunus_persica	Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1
pyrus_communis	pycom05g28780 pycom10g24340
rosa_chinensis	RchiOBHm_Chr5g0008951
rosa_laevigata	RLG00000031619
rosa_multiflora	Rmu_sc0004677.1_g000020
rosa_roxburghii	Rroxscaffold_1G00067070 Rroxscaffold_1G00067700
rosa_rugosa	Rorug04G0440500 Rorug04G0440500
rosa_samantha	Rh5AG069200 Rh5BG066000 Rh5CG077000 Rh5DG065000
rosa_wichuraiana	Rw5G006460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1062
AccB7I	CCANNNNNTGG	2 cut(s)	97, 657
AccI	GTMKAC	4 cut(s)	87, 515, 1806, 2139
AccII	CGCG	1 cut(s)	38
AciI	CCGC	4 cut(s)	216, 939, 1260, 1548
AclWI	GGATC	1 cut(s)	605
AcoI	YGGCCR	1 cut(s)	1484
AcsI	RAATTY	3 cut(s)	136, 392, 1447
AcuI	CTGAAG	5 cut(s)	276, 1360, 1623, 1797, 1998
AcvI	CACGTG	1 cut(s)	1754
AcyI	GRCGYC	2 cut(s)	18, 889
AfaI	GTAC	9 cut(s)	298, 322, 510, 673, 1076, 1476, 1641, 1870, 2007
AfiI	CCNNNNNNNGG	4 cut(s)	28, 97, 657, 1547
AflIII	ACRYGT	2 cut(s)	1141, 1751
AjnI	CCWGG	1 cut(s)	814
AjuI	GAANNNNNNNTTGG	2 cut(s)	1399, 1431
AloI	GAACNNNNNNTCC	2 cut(s)	530, 562
Alw21I	GWGCWC	1 cut(s)	1149
Alw26I	GTCTC	4 cut(s)	596, 1129, 1778, 2102
Alw44I	GTGCAC	1 cut(s)	1145
AlwI	GGATC	1 cut(s)	605
Ama87I	CYCGRG	1 cut(s)	223
AoxI	GGCC	4 cut(s)	263, 1031, 1484, 1846
ApaLI	GTGCAC	1 cut(s)	1145
ApeKI	GCWGC	6 cut(s)	40, 560, 743, 746, 1743, 2042
ApoI	RAATTY	3 cut(s)	136, 392, 1447
ArsI	GACNNNNNNTTYG	2 cut(s)	1685, 1717
AspLEI	GCGC	2 cut(s)	34, 40
AspS9I	GGNCC	2 cut(s)	782, 1846
AsuC2I	CCSGG	1 cut(s)	2039
AsuHPI	GGTGA	5 cut(s)	132, 944, 1047, 1758, 1910
AvaI	CYCGRG	1 cut(s)	223
AvaII	GGWCC	1 cut(s)	782
AxyI	CCTNAGG	1 cut(s)	729
BaeGI	GKGCMC	2 cut(s)	222, 1149
BbrPI	CACGTG	1 cut(s)	1754
BbsI	GAAGAC	2 cut(s)	69, 1695
Bbv12I	GWGCWC	1 cut(s)	1149
BbvI	GCAGC	6 cut(s)	52, 547, 730, 733, 1730, 2029
BccI	CCATC	7 cut(s)	277, 900, 1007, 1477, 1495, 1913, 1991
BceAI	ACGGC	2 cut(s)	1212, 2202
BciT130I	CCWGG	1 cut(s)	816
BclI	TGATCA	1 cut(s)	1153
BcnI	CCSGG	1 cut(s)	2039
BcoDI	GTCTC	4 cut(s)	596, 1129, 1778, 2102
BfaI	CTAG	7 cut(s)	411, 843, 875, 977, 1341, 1905, 1926
BfmI	CTRYAG	2 cut(s)	1080, 2184
BfoI	RGCGCY	1 cut(s)	35
BfuAI	ACCTGC	1 cut(s)	1062
BisI	GCNGC	6 cut(s)	41, 561, 744, 747, 1744, 2043
BlsI	GCNGC	6 cut(s)	42, 562, 745, 748, 1745, 2044
BmcAI	AGTACT	1 cut(s)	1641
Bme1390I	CCNGG	2 cut(s)	816, 2039
Bme18I	GGWCC	1 cut(s)	782
BmeT110I	CYCGRG	1 cut(s)	223
BmgT120I	GGNCC	2 cut(s)	782, 1846
BmiI	GGNNCC	2 cut(s)	1467, 1819
BmrFI	CCNGG	2 cut(s)	816, 2039
BmsI	GCATC	4 cut(s)	397, 1270, 1639, 2098
BpiI	GAAGAC	2 cut(s)	69, 1695
BpmI	CTGGAG	3 cut(s)	393, 535, 1146
BpuEI	CTTGAG	1 cut(s)	1839
BpuMI	CCSGG	1 cut(s)	2039
BsaAI	YACGTR	1 cut(s)	1754
BsaBI	GATNNNNATC	1 cut(s)	1284
BsaHI	GRCGYC	2 cut(s)	18, 889
BsaJI	CCNNGG	1 cut(s)	1842
BsaXI	ACNNNNNCTCC	2 cut(s)	1126, 1156
Bsc4I	CCNNNNNNNGG	4 cut(s)	28, 97, 657, 1547
Bse1I	ACTGG	4 cut(s)	102, 837, 1213, 1272
Bse21I	CCTNAGG	1 cut(s)	729
Bse3DI	GCAATG	2 cut(s)	1253, 1687
Bse8I	GATNNNNATC	1 cut(s)	1284
BseBI	CCWGG	1 cut(s)	816
BseDI	CCNNGG	1 cut(s)	1842
BseGI	GGATG	7 cut(s)	118, 496, 718, 1006, 1018, 2008, 2113
BseJI	GATNNNNATC	1 cut(s)	1284
BseLI	CCNNNNNNNGG	4 cut(s)	28, 97, 657, 1547
BseMI	GCAATG	2 cut(s)	1253, 1687
BseMII	CTCAG	5 cut(s)	558, 591, 720, 2113, 2164
BseNI	ACTGG	4 cut(s)	102, 837, 1213, 1272
BseRI	GAGGAG	1 cut(s)	582
BseSI	GKGCMC	2 cut(s)	222, 1149
BseXI	GCAGC	6 cut(s)	52, 547, 730, 733, 1730, 2029
BseYI	CCCAGC	2 cut(s)	625, 1672
Bsh1236I	CGCG	1 cut(s)	38
BshFI	GGCC	4 cut(s)	265, 1033, 1486, 1848
BsiHKAI	GWGCWC	1 cut(s)	1149
BsiHKCI	CYCGRG	1 cut(s)	223
BsiSI	CCGG	3 cut(s)	29, 1483, 2038
BslFI	GGGAC	5 cut(s)	240, 334, 589, 1807, 1952
BslI	CCNNNNNNNGG	4 cut(s)	28, 97, 657, 1547
BsmAI	GTCTC	4 cut(s)	596, 1129, 1778, 2102
BsmFI	GGGAC	5 cut(s)	240, 334, 589, 1807, 1952
BsmI	GAATGC	1 cut(s)	792
BsnI	GGCC	4 cut(s)	265, 1033, 1486, 1848
BsoBI	CYCGRG	1 cut(s)	223
Bsp1286I	GDGCHC	2 cut(s)	222, 1149
Bsp1407I	TGTACA	1 cut(s)	2005
Bsp143I	GATC	6 cut(s)	554, 610, 803, 973, 1153, 1343
BspACI	CCGC	4 cut(s)	216, 939, 1260, 1548
BspANI	GGCC	4 cut(s)	265, 1033, 1486, 1848
BspCNI	CTCAG	5 cut(s)	559, 592, 721, 2112, 2163
BspFNI	CGCG	1 cut(s)	38
BspHI	TCATGA	3 cut(s)	796, 823, 1720
BspLI	GGNNCC	2 cut(s)	1467, 1819
BspMI	ACCTGC	1 cut(s)	1062
BspPI	GGATC	1 cut(s)	605
BspQI	GCTCTTC	2 cut(s)	241, 1372
BsrDI	GCAATG	2 cut(s)	1253, 1687
BsrGI	TGTACA	1 cut(s)	2005
BsrI	ACTGG	4 cut(s)	102, 837, 1213, 1272
BssECI	CCNNGG	1 cut(s)	1842
BssMI	GATC	6 cut(s)	554, 610, 803, 973, 1153, 1343
BssNI	GRCGYC	2 cut(s)	18, 889
BssT1I	CCWWGG	1 cut(s)	1842
Bst2UI	CCWGG	1 cut(s)	816
Bst4CI	ACNGT	5 cut(s)	513, 1151, 1615, 1654, 1789
Bst6I	CTCTTC	5 cut(s)	99, 241, 1099, 1372, 1671
BstACI	GRCGYC	2 cut(s)	18, 889
BstAUI	TGTACA	1 cut(s)	2005
BstBAI	YACGTR	1 cut(s)	1754
BstC8I	GCNNGC	6 cut(s)	36, 218, 1035, 1260, 1678, 2215
BstDEI	CTNAG	7 cut(s)	567, 600, 729, 1309, 1827, 2099, 2150
BstF5I	GGATG	7 cut(s)	118, 496, 718, 1006, 1018, 2008, 2113
BstFNI	CGCG	1 cut(s)	38
BstH2I	RGCGCY	1 cut(s)	35
BstHHI	GCGC	2 cut(s)	34, 40
BstKTI	GATC	6 cut(s)	557, 613, 806, 976, 1156, 1346
BstMAI	GTCTC	4 cut(s)	596, 1129, 1778, 2102
BstMBI	GATC	6 cut(s)	554, 610, 803, 973, 1153, 1343
BstMWI	GCNNNNNNNGC	2 cut(s)	40, 1682
BstNI	CCWGG	1 cut(s)	816
BstNSI	RCATGY	1 cut(s)	461
BstSCI	CCNGG	2 cut(s)	814, 2037
BstSFI	CTRYAG	2 cut(s)	1080, 2184
BstSLI	GKGCMC	2 cut(s)	222, 1149
BstUI	CGCG	1 cut(s)	38
BstV1I	GCAGC	6 cut(s)	52, 547, 730, 733, 1730, 2029
BstV2I	GAAGAC	2 cut(s)	69, 1695
Bsu36I	CCTNAGG	1 cut(s)	729
BsuRI	GGCC	4 cut(s)	265, 1033, 1486, 1848
BtsCI	GGATG	7 cut(s)	118, 496, 718, 1006, 1018, 2008, 2113
BtsIMutI	CAGTG	5 cut(s)	830, 1156, 1663, 1794, 2158
BveI	ACCTGC	1 cut(s)	1062
Cac8I	GCNNGC	6 cut(s)	36, 218, 1035, 1260, 1678, 2215
CciI	TCATGA	3 cut(s)	796, 823, 1720
CfoI	GCGC	2 cut(s)	34, 40
Cfr13I	GGNCC	2 cut(s)	782, 1846
CseI	GACGC	2 cut(s)	26, 897
Csp6I	GTAC	9 cut(s)	297, 321, 509, 672, 1075, 1475, 1640, 1869, 2006
CviAII	CATG	9 cut(s)	124, 243, 458, 678, 797, 824, 1331, 1699, 1721
CviQI	GTAC	9 cut(s)	297, 321, 509, 672, 1075, 1475, 1640, 1869, 2006
DdeI	CTNAG	7 cut(s)	567, 600, 729, 1309, 1827, 2099, 2150
DpnI	GATC	6 cut(s)	556, 612, 805, 975, 1155, 1345
DpnII	GATC	6 cut(s)	554, 610, 803, 973, 1153, 1343
EaeI	YGGCCR	1 cut(s)	1484
Eam1104I	CTCTTC	5 cut(s)	99, 241, 1099, 1372, 1671
EarI	CTCTTC	5 cut(s)	99, 241, 1099, 1372, 1671
Eco130I	CCWWGG	1 cut(s)	1842
Eco32I	GATATC	1 cut(s)	130
Eco47I	GGWCC	1 cut(s)	782
Eco57I	CTGAAG	5 cut(s)	276, 1360, 1623, 1797, 1998
Eco72I	CACGTG	1 cut(s)	1754
Eco81I	CCTNAGG	1 cut(s)	729
Eco88I	CYCGRG	1 cut(s)	223
EcoRII	CCWGG	1 cut(s)	814
EcoRV	GATATC	1 cut(s)	130
EcoT14I	CCWWGG	1 cut(s)	1842
ErhI	CCWWGG	1 cut(s)	1842
FaeI	CATG	9 cut(s)	127, 246, 461, 681, 800, 827, 1334, 1702, 1724
FaqI	GGGAC	5 cut(s)	240, 334, 589, 1807, 1952
FatI	CATG	9 cut(s)	123, 242, 457, 677, 796, 823, 1330, 1698, 1720
FauI	CCCGC	2 cut(s)	209, 1267
FbaI	TGATCA	1 cut(s)	1153
FblI	GTMKAC	4 cut(s)	87, 515, 1806, 2139
Fnu4HI	GCNGC	6 cut(s)	41, 561, 744, 747, 1744, 2043
FokI	GGATG	7 cut(s)	125, 503, 705, 1013, 1025, 2015, 2120
Fsp4HI	GCNGC	6 cut(s)	41, 561, 744, 747, 1744, 2043
FspBI	CTAG	7 cut(s)	411, 843, 875, 977, 1341, 1905, 1926
GlaI	GCGC	2 cut(s)	33, 39
GluI	GCNGC	6 cut(s)	41, 561, 744, 747, 1744, 2043
GsaI	CCCAGC	2 cut(s)	629, 1676
GsuI	CTGGAG	3 cut(s)	393, 535, 1146
HaeII	RGCGCY	1 cut(s)	35
HaeIII	GGCC	4 cut(s)	265, 1033, 1486, 1848
HapII	CCGG	3 cut(s)	29, 1483, 2038
HgaI	GACGC	2 cut(s)	26, 897
HhaI	GCGC	2 cut(s)	34, 40
Hin1I	GRCGYC	2 cut(s)	18, 889
Hin1II	CATG	9 cut(s)	127, 246, 461, 681, 800, 827, 1334, 1702, 1724
Hin6I	GCGC	2 cut(s)	32, 38
HinP1I	GCGC	2 cut(s)	32, 38
HincII	GTYRAC	2 cut(s)	121, 1931
HindII	GTYRAC	2 cut(s)	121, 1931
HindIII	AAGCTT	2 cut(s)	1590, 2234
HpaII	CCGG	3 cut(s)	29, 1483, 2038
HphI	GGTGA	5 cut(s)	132, 944, 1047, 1758, 1910
Hpy166II	GTNNAC	7 cut(s)	88, 121, 516, 1147, 1807, 1931, 2140
Hpy8I	GTNNAC	7 cut(s)	88, 121, 516, 1147, 1807, 1931, 2140
Hpy99I	CGWCG	7 cut(s)	17, 20, 50, 53, 56, 59, 62
HpyAV	CCTTC	7 cut(s)	773, 1384, 1489, 1512, 1598, 1720, 2084
HpyCH4III	ACNGT	5 cut(s)	513, 1151, 1615, 1654, 1789
HpyCH4IV	ACGT	3 cut(s)	913, 1141, 1753
HpyCH4V	TGCA	9 cut(s)	663, 749, 756, 958, 1147, 1283, 1630, 1680, 2111
HpyF10VI	GCNNNNNNNGC	2 cut(s)	40, 1682
HpyF3I	CTNAG	7 cut(s)	567, 600, 729, 1309, 1827, 2099, 2150
HpySE526I	ACGT	3 cut(s)	913, 1141, 1753
Hsp92I	GRCGYC	2 cut(s)	18, 889
Hsp92II	CATG	9 cut(s)	127, 246, 461, 681, 800, 827, 1334, 1702, 1724
HspAI	GCGC	2 cut(s)	32, 38
Ksp22I	TGATCA	1 cut(s)	1153
Kzo9I	GATC	6 cut(s)	554, 610, 803, 973, 1153, 1343
LguI	GCTCTTC	2 cut(s)	241, 1372
LmnI	GCTCC	1 cut(s)	1465
Lsp1109I	GCAGC	6 cut(s)	52, 547, 730, 733, 1730, 2029
LweI	GCATC	4 cut(s)	397, 1270, 1639, 2098
MaeI	CTAG	7 cut(s)	411, 843, 875, 977, 1341, 1905, 1926
MaeII	ACGT	3 cut(s)	913, 1141, 1753
MaeIII	GTNAC	4 cut(s)	1560, 1754, 1771, 2194
MalI	GATC	6 cut(s)	556, 612, 805, 975, 1155, 1345
MboI	GATC	6 cut(s)	554, 610, 803, 973, 1153, 1343
MfeI	CAATTG	2 cut(s)	630, 1459
MhlI	GDGCHC	2 cut(s)	222, 1149
MlyI	GAGTC	2 cut(s)	2, 2024
MmeI	TCCRAC	1 cut(s)	36
MseI	TTAA	6 cut(s)	198, 1047, 1437, 1991, 2072, 2127
MslI	CAYNNNNRTG	1 cut(s)	462
MspA1I	CMGCKG	3 cut(s)	560, 941, 1743
MspI	CCGG	3 cut(s)	29, 1483, 2038
MspR9I	CCNGG	2 cut(s)	816, 2039
MunI	CAATTG	2 cut(s)	630, 1459
Mva1269I	GAATGC	1 cut(s)	792
MvaI	CCWGG	1 cut(s)	816
MvnI	CGCG	1 cut(s)	38
MwoI	GCNNNNNNNGC	2 cut(s)	40, 1682
NciI	CCSGG	1 cut(s)	2039
NdeII	GATC	6 cut(s)	554, 610, 803, 973, 1153, 1343
NlaIII	CATG	9 cut(s)	127, 246, 461, 681, 800, 827, 1334, 1702, 1724
NlaIV	GGNNCC	2 cut(s)	1467, 1819
NmuCI	GTSAC	1 cut(s)	1754
NspI	RCATGY	1 cut(s)	461
PagI	TCATGA	3 cut(s)	796, 823, 1720
PciSI	GCTCTTC	2 cut(s)	241, 1372
PcsI	WCGNNNNNNNCGW	5 cut(s)	42, 51, 54, 57, 66
PctI	GAATGC	1 cut(s)	792
PfeI	GAWTC	9 cut(s)	415, 452, 539, 879, 920, 935, 1837, 1901, 2146
PflMI	CCANNNNNTGG	2 cut(s)	97, 657
PkrI	GCNGC	6 cut(s)	42, 562, 745, 748, 1745, 2044
PleI	GAGTC	2 cut(s)	2, 2023
PmaCI	CACGTG	1 cut(s)	1754
PmlI	CACGTG	1 cut(s)	1754
PpsI	GAGTC	2 cut(s)	2, 2023
Ppu21I	YACGTR	1 cut(s)	1754
Psp6I	CCWGG	1 cut(s)	814
PspCI	CACGTG	1 cut(s)	1754
PspFI	CCCAGC	2 cut(s)	625, 1672
PspGI	CCWGG	1 cut(s)	814
PspN4I	GGNNCC	2 cut(s)	1467, 1819
PspPI	GGNCC	2 cut(s)	782, 1846
PvuII	CAGCTG	2 cut(s)	560, 1743
RsaI	GTAC	9 cut(s)	298, 322, 510, 673, 1076, 1476, 1641, 1870, 2007
RsaNI	GTAC	9 cut(s)	297, 321, 509, 672, 1075, 1475, 1640, 1869, 2006
RseI	CAYNNNNRTG	1 cut(s)	462
SapI	GCTCTTC	2 cut(s)	241, 1372
SaqAI	TTAA	6 cut(s)	198, 1047, 1437, 1991, 2072, 2127
SatI	GCNGC	6 cut(s)	41, 561, 744, 747, 1744, 2043
Sau3AI	GATC	6 cut(s)	554, 610, 803, 973, 1153, 1343
Sau96I	GGNCC	2 cut(s)	782, 1846
ScaI	AGTACT	1 cut(s)	1641
SchI	GAGTC	2 cut(s)	2, 2024
ScrFI	CCNGG	2 cut(s)	816, 2039
SduI	GDGCHC	2 cut(s)	222, 1149
SfaNI	GCATC	4 cut(s)	397, 1270, 1639, 2098
SfcI	CTRYAG	2 cut(s)	1080, 2184
SinI	GGWCC	1 cut(s)	782
SmiMI	CAYNNNNRTG	1 cut(s)	462
SmlI	CTYRAG	1 cut(s)	1854
SmoI	CTYRAG	1 cut(s)	1854
SsiI	CCGC	4 cut(s)	216, 939, 1260, 1548
SspMI	CTAG	7 cut(s)	411, 843, 875, 977, 1341, 1905, 1926
StyD4I	CCNGG	2 cut(s)	814, 2037
StyI	CCWWGG	1 cut(s)	1842
TaaI	ACNGT	5 cut(s)	513, 1151, 1615, 1654, 1789
TaiI	ACGT	3 cut(s)	916, 1144, 1756
TaqI	TCGA	3 cut(s)	45, 78, 2253
TatI	WGTACW	3 cut(s)	1639, 1868, 2005
TfiI	GAWTC	9 cut(s)	415, 452, 539, 879, 920, 935, 1837, 1901, 2146
Tru1I	TTAA	6 cut(s)	198, 1047, 1437, 1991, 2072, 2127
Tru9I	TTAA	6 cut(s)	198, 1047, 1437, 1991, 2072, 2127
TscAI	CASTG	5 cut(s)	837, 1156, 1663, 1794, 2158
TseFI	GTSAC	1 cut(s)	1754
TseI	GCWGC	6 cut(s)	40, 560, 743, 746, 1743, 2042
Tsp45I	GTSAC	1 cut(s)	1754
TspDTI	ATGAA	7 cut(s)	129, 512, 666, 785, 812, 1242, 1986
TspRI	CASTG	5 cut(s)	837, 1156, 1663, 1794, 2158
Van91I	CCANNNNNTGG	2 cut(s)	97, 657
VneI	GTGCAC	1 cut(s)	1145
VpaK11BI	GGWCC	1 cut(s)	782
XapI	RAATTY	3 cut(s)	136, 392, 1447
XceI	RCATGY	1 cut(s)	461
XmiI	GTMKAC	4 cut(s)	87, 515, 1806, 2139
XspI	CTAG	7 cut(s)	411, 843, 875, 977, 1341, 1905, 1926
ZrmI	AGTACT	1 cut(s)	1641

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.