Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0003690

Physical Location & Seq

Genomic Coordinates Reverse (-)

5441055 .. 5445844

Gene Structure 4790 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG066000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGTCTGACTCCGACGACGCCCAATCTCCGGCGCTCGCGCAGCTCTCCGACGACGACGACGACGACGAAGACCCCGAAGAACTCGAACAAGTAGACCAAGAACTGGAAGAAGAGAGGGATGAAGTTGACATGGATATCTCAAATTCACCAATTCAAGCTCATCATAGAGATGATAGACGAGAAGATATTAAGTTTGAGGGAATTGGCGGGCACTCGGGACCAGGCTCTTCTACATGGGGGAAATCTGAAGCAAGGCCACCGTCTAACACACTTGATATGGAAGAAAGTACGAGTAATTCCAATTTTGCTGGTACTTCAAATGAGCCATTACACTTGAAGTCCCAGAAAACTTTTGCTGGTGCTGGAGAATGTAGAAGCCAAGAATTTGCTGAAAATGATGCTAGGATTCTTTCTGGAAAGAAAACCTCTACACACCATACTGAATCACATGCTAATGTCAAGAATGATATCAATTCAGAGGATGAGATGAAACAAGTGGCACAGTCTATGAATGATAGAAAGAAAATGGAATCAAGGTTCTCCAGATCAGCTGCTTCTGAGATAGGGACACATATAACATCTCCTCTTGCTGAGACTAATGATCCAAACAAACGCCCAGCAATTGTCTGCGACTTTTACGCAAAAGGTTGGTGCATTAGAGGTACTTCATGTAGGTTTATCCATACAAAAGATAGTCCAAAGAATAGTCATCCACAACCTGAAGGAGATGTTGCTGCTGCAAGTTTCAGTAGAGAAGTCAAGGTTGATGAAGGTCCAAGAGGCATTCATGAGAGATCAAGATTGCCTGGTTTTCATGACCCACTGACTTCTTCTAGTGGAAATGGTTTTCCATTTTCCTCACATCTAGGAATCCCAAGACGCCATCAGTTTCAATCAGTTCAACGTGAGGAATTAAATGTGGGTGATTCCGCTGATGTCCAGAAATTGCATTTACCCAAAGATGATCTAGCATTTCCTACCTCCTATAAGGATGTAGGAAAGGATGGTCAGATACGAAATTGGCCTGCTGATGATTTTAACAATTCACCTAATAAAAAAGGCAGGTACCCTACAGGAAATACCTCTTCTCATTCAAGCAGTATGGAGGACCTGGCTGGAGTTTGGAGACAACGTGTGCACAGTGATCATACTTCACCACTTGTGAGCCATTCCTTGAATAGCTCAAATACTCTTATAGCTACTGGCTTGTTCCCTAGTAGCCGTATTTCAACTTGGGATGGATTTTCATTGCCCGCAAGTTATTCCAGTTTAGATGCAAATCCTCTGGGTTCTAAAAAGCTCTTAGACAGCAATAGGGATTATCATGCTTATACTAGATCATCTGCCTTTCTGAAAAGCTCTTCTCCCTTCACTAGTTCTGAACTGAACAACTTTCCCCCAATCAGCATTTCAGAGCACTCTGCTGAACTTAAAACAAAAATTTCTTCAAACAATTGGGAGCCATCTGTACCCTTCCGGCCATCTTTTATTCTTCCTTCTGATTTTCTATCATTTTCAGCAAAGCAGTATGACCCTCTTCGCAGTAGCATTGAGTTACCCAAGTTAACTAACAACTCCTTTGAAGCTTTCTACTCTGAAGGGGCAACTGTTGGGAATAGACTGCATCAGAAAGTACTTCCTGAAACTGTCAGTGGGACTCTGCCCCCAGCTTGCGATGCTGATAGAAACTCCATGTCTTCTCATAATACATATCATGAGAAGGTATTAGATAACAGCTGCTATACACGCGACCCTAATTCACCTGTAACTGAAGCAGAGACAGTGGGGACTTCTGTTGTCTACCAAAATGGAACCTTGACTAAGGACGACAATCCCGTGGGCCACTCTCAAGTCAAAGGTAGTACAAATCGAAACAAAATCAGTATCTTTGGTGATTCTAGACAAAAAAGTGATGGTTCTAGTCAACAAAGGGACATAAAAGTAGATAGATTTAGAGAAAACAATGAAGCGGAAGTTGAACATGTAACAGATGGGGATGTACAACAAGAGTCAAAAGAAATGAAGCAATTCCGGGCTCCTCTTATAGAATTAGTGAAAGAGTTGTTAAAGCCAAAATGGCGTGAAGGTAGTCTCAGCAAGGATGCACACAACAAGATAGTTAAGAAAGCAGTAGACAAGATTCTCAGTGCTTTTCAGCCCCAACAAATCCCACCTACCATAGAAGCAGTTATGCAATATCTGTCTGCTTGCCGTCCAAAAATCTCAAAGCTTGTTGAGGGATATATTGAGAGATATGGAAAGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0010219 GO:0010220 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0065007 GO:0080134

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

755

Amino Acids

83.76

Weight (kDa)

5.65

Isoelectric Point (pI)

51.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003690)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810
malus_domestica	MD05G1311700.v1.1 MD10G1291300.v1.1
prunus_persica	Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1
pyrus_communis	pycom05g28780 pycom10g24340
rosa_chinensis	RchiOBHm_Chr5g0008951
rosa_laevigata	RLG00000031619
rosa_multiflora	Rmu_sc0004677.1_g000020
rosa_roxburghii	Rroxscaffold_1G00067070 Rroxscaffold_1G00067700
rosa_rugosa	Rorug04G0440500 Rorug04G0440500
rosa_samantha	Rh5AG069200 Rh5BG066000 Rh5CG077000 Rh5DG065000
rosa_wichuraiana	Rw5G006460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1053
Acc65I	GGTACC	1 cut(s)	1065
AccB1I	GGYRCC	1 cut(s)	1065
AccB7I	CCANNNNNTGG	1 cut(s)	103
AccI	GTMKAC	3 cut(s)	93, 1800, 2133
AccII	CGCG	2 cut(s)	38, 1749
AciI	CCGC	4 cut(s)	207, 930, 1254, 1970
AclWI	GGATC	1 cut(s)	596
AcoI	YGGCCR	1 cut(s)	1478
AcsI	RAATTY	3 cut(s)	142, 383, 1440
AcuI	CTGAAG	4 cut(s)	267, 741, 1617, 1791
AcyI	GRCGYC	2 cut(s)	18, 880
AfaI	GTAC	8 cut(s)	289, 313, 664, 1067, 1470, 1635, 1864, 2001
AfiI	CCNNNNNNNGG	2 cut(s)	28, 103
AflIII	ACRYGT	2 cut(s)	1132, 1981
AhlI	ACTAGT	1 cut(s)	1373
AjnI	CCWGG	3 cut(s)	220, 805, 1110
AjuI	GAANNNNNNNTTGG	2 cut(s)	1393, 1425
AloI	GAACNNNNNNTCC	2 cut(s)	521, 553
Alw21I	GWGCWC	2 cut(s)	1140, 1419
Alw26I	GTCTC	4 cut(s)	587, 1120, 1772, 2096
Alw44I	GTGCAC	1 cut(s)	1136
AlwI	GGATC	1 cut(s)	596
Ama87I	CYCGRG	1 cut(s)	214
AoxI	GGCC	4 cut(s)	254, 1022, 1478, 1840
ApaLI	GTGCAC	1 cut(s)	1136
ApeKI	GCWGC	5 cut(s)	40, 551, 734, 737, 1737
ApoI	RAATTY	3 cut(s)	142, 383, 1440
Asp700I	GAANNNNTTC	1 cut(s)	2027
Asp718I	GGTACC	1 cut(s)	1065
AspLEI	GCGC	2 cut(s)	34, 40
AspS9I	GGNCC	4 cut(s)	218, 773, 1108, 1840
AsuC2I	CCSGG	1 cut(s)	2033
AsuHPI	GGTGA	6 cut(s)	138, 935, 1038, 1146, 1752, 1904
AvaI	CYCGRG	1 cut(s)	214
AvaII	GGWCC	3 cut(s)	218, 773, 1108
BaeGI	GKGCMC	2 cut(s)	213, 1140
BanI	GGYRCC	1 cut(s)	1065
BanII	GRGCYC	1 cut(s)	2038
BbsI	GAAGAC	2 cut(s)	75, 1689
Bbv12I	GWGCWC	2 cut(s)	1140, 1419
BbvI	GCAGC	5 cut(s)	52, 538, 721, 724, 1724
BccI	CCATC	7 cut(s)	891, 998, 1232, 1471, 1489, 1907, 1985
BceAI	ACGGC	2 cut(s)	1206, 2196
BciT130I	CCWGG	3 cut(s)	222, 807, 1112
BclI	TGATCA	1 cut(s)	1144
BcnI	CCSGG	1 cut(s)	2033
BcoDI	GTCTC	4 cut(s)	587, 1120, 1772, 2096
BcuI	ACTAGT	1 cut(s)	1373
BfaI	CTAG	9 cut(s)	402, 834, 866, 968, 1215, 1335, 1374, 1899, 1920
BfmI	CTRYAG	1 cut(s)	1071
BfoI	RGCGCY	1 cut(s)	35
BfuAI	ACCTGC	1 cut(s)	1053
BglI	GCCNNNNNGGC	1 cut(s)	2077
BisI	GCNGC	5 cut(s)	41, 552, 735, 738, 1738
BlsI	GCNGC	5 cut(s)	42, 553, 736, 739, 1739
BmcAI	AGTACT	1 cut(s)	1635
Bme1390I	CCNGG	4 cut(s)	222, 807, 1112, 2033
Bme18I	GGWCC	3 cut(s)	218, 773, 1108
BmeT110I	CYCGRG	1 cut(s)	214
BmgT120I	GGNCC	4 cut(s)	218, 773, 1108, 1840
BmiI	GGNNCC	5 cut(s)	219, 1067, 1461, 1813, 2037
BmrFI	CCNGG	4 cut(s)	222, 807, 1112, 2033
BmsI	GCATC	5 cut(s)	388, 1264, 1633, 1666, 2092
BpiI	GAAGAC	2 cut(s)	75, 1689
BpmI	CTGGAG	3 cut(s)	384, 526, 1137
BpuEI	CTTGAG	1 cut(s)	1833
BpuMI	CCSGG	1 cut(s)	2033
BsaBI	GATNNNNATC	1 cut(s)	1278
BsaHI	GRCGYC	2 cut(s)	18, 880
BsaJI	CCNNGG	1 cut(s)	1836
BsaXI	ACNNNNNCTCC	2 cut(s)	1117, 1147
Bsc4I	CCNNNNNNNGG	2 cut(s)	28, 103
Bse1I	ACTGG	3 cut(s)	108, 1207, 1266
Bse3DI	GCAATG	1 cut(s)	1247
Bse8I	GATNNNNATC	1 cut(s)	1278
BseBI	CCWGG	3 cut(s)	222, 807, 1112
BseDI	CCNNGG	1 cut(s)	1836
BseGI	GGATG	8 cut(s)	124, 487, 709, 997, 1009, 1243, 2002, 2107
BseJI	GATNNNNATC	1 cut(s)	1278
BseLI	CCNNNNNNNGG	2 cut(s)	28, 103
BseMI	GCAATG	1 cut(s)	1247
BseMII	CTCAG	4 cut(s)	549, 582, 2107, 2158
BseNI	ACTGG	3 cut(s)	108, 1207, 1266
BseRI	GAGGAG	2 cut(s)	573, 2028
BseSI	GKGCMC	2 cut(s)	213, 1140
BseXI	GCAGC	5 cut(s)	52, 538, 721, 724, 1724
BseYI	CCCAGC	2 cut(s)	616, 1666
Bsh1236I	CGCG	2 cut(s)	38, 1749
BshFI	GGCC	4 cut(s)	256, 1024, 1480, 1842
BshNI	GGYRCC	1 cut(s)	1065
BsiHKAI	GWGCWC	2 cut(s)	1140, 1419
BsiHKCI	CYCGRG	1 cut(s)	214
BsiSI	CCGG	3 cut(s)	29, 1477, 2032
BslFI	GGGAC	6 cut(s)	231, 325, 580, 1669, 1801, 1946
BslI	CCNNNNNNNGG	2 cut(s)	28, 103
BsmAI	GTCTC	4 cut(s)	587, 1120, 1772, 2096
BsmFI	GGGAC	6 cut(s)	231, 325, 580, 1669, 1801, 1946
BsmI	GAATGC	1 cut(s)	783
BsnI	GGCC	4 cut(s)	256, 1024, 1480, 1842
BsoBI	CYCGRG	1 cut(s)	214
Bsp1286I	GDGCHC	4 cut(s)	213, 1140, 1419, 2038
Bsp1407I	TGTACA	1 cut(s)	1999
Bsp143I	GATC	6 cut(s)	545, 601, 794, 964, 1144, 1337
BspACI	CCGC	4 cut(s)	207, 930, 1254, 1970
BspANI	GGCC	4 cut(s)	256, 1024, 1480, 1842
BspCNI	CTCAG	4 cut(s)	550, 583, 2106, 2157
BspFNI	CGCG	2 cut(s)	38, 1749
BspHI	TCATGA	3 cut(s)	787, 814, 1714
BspLI	GGNNCC	5 cut(s)	219, 1067, 1461, 1813, 2037
BspMI	ACCTGC	1 cut(s)	1053
BspPI	GGATC	1 cut(s)	596
BspQI	GCTCTTC	2 cut(s)	232, 1366
BspT107I	GGYRCC	1 cut(s)	1065
BsrDI	GCAATG	1 cut(s)	1247
BsrGI	TGTACA	1 cut(s)	1999
BsrI	ACTGG	3 cut(s)	108, 1207, 1266
BssECI	CCNNGG	1 cut(s)	1836
BssMI	GATC	6 cut(s)	545, 601, 794, 964, 1144, 1337
BssNI	GRCGYC	2 cut(s)	18, 880
Bst2UI	CCWGG	3 cut(s)	222, 807, 1112
Bst4CI	ACNGT	6 cut(s)	261, 504, 1142, 1609, 1648, 1783
Bst6I	CTCTTC	5 cut(s)	105, 232, 1090, 1366, 1542
BstACI	GRCGYC	2 cut(s)	18, 880
BstAUI	TGTACA	1 cut(s)	1999
BstC8I	GCNNGC	6 cut(s)	36, 209, 1026, 1254, 1672, 2209
BstDEI	CTNAG	6 cut(s)	558, 591, 1303, 1821, 2093, 2144
BstDSI	CCRYGG	1 cut(s)	1836
BstF5I	GGATG	8 cut(s)	124, 487, 709, 997, 1009, 1243, 2002, 2107
BstFNI	CGCG	2 cut(s)	38, 1749
BstH2I	RGCGCY	1 cut(s)	35
BstHHI	GCGC	2 cut(s)	34, 40
BstKTI	GATC	6 cut(s)	548, 604, 797, 967, 1147, 1340
BstMAI	GTCTC	4 cut(s)	587, 1120, 1772, 2096
BstMBI	GATC	6 cut(s)	545, 601, 794, 964, 1144, 1337
BstMWI	GCNNNNNNNGC	4 cut(s)	40, 1676, 1746, 2077
BstNI	CCWGG	3 cut(s)	222, 807, 1112
BstNSI	RCATGY	2 cut(s)	452, 1985
BstSCI	CCNGG	4 cut(s)	220, 805, 1110, 2031
BstSFI	CTRYAG	1 cut(s)	1071
BstSLI	GKGCMC	2 cut(s)	213, 1140
BstUI	CGCG	2 cut(s)	38, 1749
BstV1I	GCAGC	5 cut(s)	52, 538, 721, 724, 1724
BstV2I	GAAGAC	2 cut(s)	75, 1689
BsuRI	GGCC	4 cut(s)	256, 1024, 1480, 1842
BtgI	CCRYGG	1 cut(s)	1836
BtgZI	GCGATG	1 cut(s)	1689
BtsCI	GGATG	8 cut(s)	124, 487, 709, 997, 1009, 1243, 2002, 2107
BtsIMutI	CAGTG	5 cut(s)	821, 1147, 1657, 1788, 2152
BveI	ACCTGC	1 cut(s)	1053
Cac8I	GCNNGC	6 cut(s)	36, 209, 1026, 1254, 1672, 2209
CciI	TCATGA	3 cut(s)	787, 814, 1714
CfoI	GCGC	2 cut(s)	34, 40
Cfr13I	GGNCC	4 cut(s)	218, 773, 1108, 1840
CseI	GACGC	2 cut(s)	26, 888
Csp6I	GTAC	8 cut(s)	288, 312, 663, 1066, 1469, 1634, 1863, 2000
CviQI	GTAC	8 cut(s)	288, 312, 663, 1066, 1469, 1634, 1863, 2000
DdeI	CTNAG	6 cut(s)	558, 591, 1303, 1821, 2093, 2144
DpnI	GATC	6 cut(s)	547, 603, 796, 966, 1146, 1339
DpnII	GATC	6 cut(s)	545, 601, 794, 964, 1144, 1337
EaeI	YGGCCR	1 cut(s)	1478
Eam1104I	CTCTTC	5 cut(s)	105, 232, 1090, 1366, 1542
EarI	CTCTTC	5 cut(s)	105, 232, 1090, 1366, 1542
Eco24I	GRGCYC	1 cut(s)	2038
Eco32I	GATATC	2 cut(s)	136, 469
Eco47I	GGWCC	3 cut(s)	218, 773, 1108
Eco57I	CTGAAG	4 cut(s)	267, 741, 1617, 1791
Eco88I	CYCGRG	1 cut(s)	214
EcoO109I	RGGNCCY	1 cut(s)	1108
EcoRII	CCWGG	3 cut(s)	220, 805, 1110
EcoRV	GATATC	2 cut(s)	136, 469
EcoT38I	GRGCYC	1 cut(s)	2038
FaqI	GGGAC	6 cut(s)	231, 325, 580, 1669, 1801, 1946
FauI	CCCGC	2 cut(s)	200, 1261
FbaI	TGATCA	1 cut(s)	1144
FblI	GTMKAC	3 cut(s)	93, 1800, 2133
Fnu4HI	GCNGC	5 cut(s)	41, 552, 735, 738, 1738
FokI	GGATG	8 cut(s)	131, 494, 696, 1004, 1016, 1250, 2009, 2114
FriOI	GRGCYC	1 cut(s)	2038
Fsp4HI	GCNGC	5 cut(s)	41, 552, 735, 738, 1738
FspBI	CTAG	9 cut(s)	402, 834, 866, 968, 1215, 1335, 1374, 1899, 1920
GlaI	GCGC	2 cut(s)	33, 39
GluI	GCNGC	5 cut(s)	41, 552, 735, 738, 1738
GsaI	CCCAGC	2 cut(s)	620, 1670
GsuI	CTGGAG	3 cut(s)	384, 526, 1137
HaeII	RGCGCY	1 cut(s)	35
HaeIII	GGCC	4 cut(s)	256, 1024, 1480, 1842
HapII	CCGG	3 cut(s)	29, 1477, 2032
HgaI	GACGC	2 cut(s)	26, 888
HhaI	GCGC	2 cut(s)	34, 40
Hin1I	GRCGYC	2 cut(s)	18, 880
Hin6I	GCGC	2 cut(s)	32, 38
HinP1I	GCGC	2 cut(s)	32, 38
HincII	GTYRAC	3 cut(s)	127, 1566, 1925
HindII	GTYRAC	3 cut(s)	127, 1566, 1925
HindIII	AAGCTT	2 cut(s)	1584, 2228
HpaI	GTTAAC	1 cut(s)	1566
HpaII	CCGG	3 cut(s)	29, 1477, 2032
HphI	GGTGA	6 cut(s)	138, 935, 1038, 1146, 1752, 1904
Hpy166II	GTNNAC	7 cut(s)	94, 127, 1138, 1566, 1801, 1925, 2134
Hpy8I	GTNNAC	7 cut(s)	94, 127, 1138, 1566, 1801, 1925, 2134
Hpy99I	CGWCG	8 cut(s)	17, 20, 53, 56, 59, 62, 65, 68
HpyAV	CCTTC	8 cut(s)	716, 764, 1378, 1483, 1506, 1592, 1714, 2078
HpyCH4III	ACNGT	6 cut(s)	261, 504, 1142, 1609, 1648, 1783
HpyCH4IV	ACGT	2 cut(s)	904, 1132
HpyCH4V	TGCA	8 cut(s)	654, 740, 949, 1138, 1277, 1624, 2105, 2194
HpyF10VI	GCNNNNNNNGC	4 cut(s)	40, 1676, 1746, 2077
HpyF3I	CTNAG	6 cut(s)	558, 591, 1303, 1821, 2093, 2144
HpySE526I	ACGT	2 cut(s)	904, 1132
Hsp92I	GRCGYC	2 cut(s)	18, 880
HspAI	GCGC	2 cut(s)	32, 38
KpnI	GGTACC	1 cut(s)	1069
Ksp22I	TGATCA	1 cut(s)	1144
KspAI	GTTAAC	1 cut(s)	1566
Kzo9I	GATC	6 cut(s)	545, 601, 794, 964, 1144, 1337
LguI	GCTCTTC	2 cut(s)	232, 1366
LmnI	GCTCC	2 cut(s)	1459, 2041
Lsp1109I	GCAGC	5 cut(s)	52, 538, 721, 724, 1724
LweI	GCATC	5 cut(s)	388, 1264, 1633, 1666, 2092
MaeI	CTAG	9 cut(s)	402, 834, 866, 968, 1215, 1335, 1374, 1899, 1920
MaeII	ACGT	2 cut(s)	904, 1132
MaeIII	GTNAC	3 cut(s)	1554, 1765, 1984
MalI	GATC	6 cut(s)	547, 603, 796, 966, 1146, 1339
MboI	GATC	6 cut(s)	545, 601, 794, 964, 1144, 1337
MfeI	CAATTG	2 cut(s)	621, 1453
MhlI	GDGCHC	4 cut(s)	213, 1140, 1419, 2038
MlyI	GAGTC	3 cut(s)	2, 1651, 2018
MmeI	TCCRAC	2 cut(s)	36, 72
MroXI	GAANNNNTTC	1 cut(s)	2027
MseI	TTAA	7 cut(s)	189, 914, 1038, 1431, 1565, 2066, 2121
MslI	CAYNNNNRTG	2 cut(s)	168, 453
MspA1I	CMGCKG	3 cut(s)	551, 932, 1737
MspI	CCGG	3 cut(s)	29, 1477, 2032
MspR9I	CCNGG	4 cut(s)	222, 807, 1112, 2033
MunI	CAATTG	2 cut(s)	621, 1453
Mva1269I	GAATGC	1 cut(s)	783
MvaI	CCWGG	3 cut(s)	222, 807, 1112
MvnI	CGCG	2 cut(s)	38, 1749
MwoI	GCNNNNNNNGC	4 cut(s)	40, 1676, 1746, 2077
NciI	CCSGG	1 cut(s)	2033
NdeII	GATC	6 cut(s)	545, 601, 794, 964, 1144, 1337
NlaIV	GGNNCC	5 cut(s)	219, 1067, 1461, 1813, 2037
NspI	RCATGY	2 cut(s)	452, 1985
PagI	TCATGA	3 cut(s)	787, 814, 1714
PciI	ACATGT	1 cut(s)	1981
PciSI	GCTCTTC	2 cut(s)	232, 1366
PcsI	WCGNNNNNNNCGW	5 cut(s)	57, 60, 63, 72, 1833
PctI	GAATGC	1 cut(s)	783
PdmI	GAANNNNTTC	1 cut(s)	2027
PfeI	GAWTC	7 cut(s)	406, 443, 530, 870, 926, 1895, 2140
PflMI	CCANNNNNTGG	1 cut(s)	103
PkrI	GCNGC	5 cut(s)	42, 553, 736, 739, 1739
PleI	GAGTC	3 cut(s)	2, 1651, 2017
PpsI	GAGTC	3 cut(s)	2, 1651, 2017
PpuMI	RGGWCCY	1 cut(s)	1108
PscI	ACATGT	1 cut(s)	1981
Psp5II	RGGWCCY	1 cut(s)	1108
Psp6I	CCWGG	3 cut(s)	220, 805, 1110
PspFI	CCCAGC	2 cut(s)	616, 1666
PspGI	CCWGG	3 cut(s)	220, 805, 1110
PspN4I	GGNNCC	5 cut(s)	219, 1067, 1461, 1813, 2037
PspPI	GGNCC	4 cut(s)	218, 773, 1108, 1840
PspPPI	RGGWCCY	1 cut(s)	1108
PvuII	CAGCTG	2 cut(s)	551, 1737
RsaI	GTAC	8 cut(s)	289, 313, 664, 1067, 1470, 1635, 1864, 2001
RsaNI	GTAC	8 cut(s)	288, 312, 663, 1066, 1469, 1634, 1863, 2000
RseI	CAYNNNNRTG	2 cut(s)	168, 453
SapI	GCTCTTC	2 cut(s)	232, 1366
SaqAI	TTAA	7 cut(s)	189, 914, 1038, 1431, 1565, 2066, 2121
SatI	GCNGC	5 cut(s)	41, 552, 735, 738, 1738
Sau3AI	GATC	6 cut(s)	545, 601, 794, 964, 1144, 1337
Sau96I	GGNCC	4 cut(s)	218, 773, 1108, 1840
ScaI	AGTACT	1 cut(s)	1635
SchI	GAGTC	3 cut(s)	2, 1651, 2018
ScrFI	CCNGG	4 cut(s)	222, 807, 1112, 2033
SduI	GDGCHC	4 cut(s)	213, 1140, 1419, 2038
SfaNI	GCATC	5 cut(s)	388, 1264, 1633, 1666, 2092
SfcI	CTRYAG	1 cut(s)	1071
SinI	GGWCC	3 cut(s)	218, 773, 1108
SmiMI	CAYNNNNRTG	2 cut(s)	168, 453
SmlI	CTYRAG	1 cut(s)	1848
SmoI	CTYRAG	1 cut(s)	1848
SpeI	ACTAGT	1 cut(s)	1373
SsiI	CCGC	4 cut(s)	207, 930, 1254, 1970
SspMI	CTAG	9 cut(s)	402, 834, 866, 968, 1215, 1335, 1374, 1899, 1920
StyD4I	CCNGG	4 cut(s)	220, 805, 1110, 2031
TaaI	ACNGT	6 cut(s)	261, 504, 1142, 1609, 1648, 1783
TaiI	ACGT	2 cut(s)	907, 1135
TaqI	TCGA	2 cut(s)	84, 1870
TatI	WGTACW	3 cut(s)	1633, 1862, 1999
TfiI	GAWTC	7 cut(s)	406, 443, 530, 870, 926, 1895, 2140
Tru1I	TTAA	7 cut(s)	189, 914, 1038, 1431, 1565, 2066, 2121
Tru9I	TTAA	7 cut(s)	189, 914, 1038, 1431, 1565, 2066, 2121
TscAI	CASTG	5 cut(s)	828, 1147, 1657, 1788, 2152
TseI	GCWGC	5 cut(s)	40, 551, 734, 737, 1737
TspRI	CASTG	5 cut(s)	828, 1147, 1657, 1788, 2152
Van91I	CCANNNNNTGG	1 cut(s)	103
VneI	GTGCAC	1 cut(s)	1136
VpaK11BI	GGWCC	3 cut(s)	218, 773, 1108
XapI	RAATTY	3 cut(s)	142, 383, 1440
XbaI	TCTAGA	1 cut(s)	1898
XceI	RCATGY	2 cut(s)	452, 1985
XmiI	GTMKAC	3 cut(s)	93, 1800, 2133
XmnI	GAANNNNTTC	1 cut(s)	2027
XspI	CTAG	9 cut(s)	402, 834, 866, 968, 1215, 1335, 1374, 1899, 1920
ZrmI	AGTACT	1 cut(s)	1635

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.