Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003690

Physical Location & Seq

Genomic Coordinates Reverse (-)

5897966 .. 5901612

Gene Structure 3647 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ28987

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGTCTGCCTCCGACGACGCCCAATTTCCGGCGCTCGCGCAGCTCTCCGACGACGACGACGACGACGAAGACCCCGAAGAACTCGAACAAGTAGACCAAGAACTGGAAGAAGAGAGGGATGAAGTTGACATGGATATCTCAAATTCACCAATTCAAGCTCATCATAGAGATGATAGACGAGAAGATATTAAGTTTGAGGGTATTAGCGGGCACTCGGGACCAGGCTCTTCTACTTGGGGGAAATCTGAAGCAAGGCCACCGTCTAACACAATTGATATGGAAGAAAGTACGAGTAATTCCAATTTTTCTGGTACTTCAAATGAGCCATTACGCTTGAAGTCCCAGAAAACTTTTGCTGGTGCTGGAGAATGTAGAAGCCAAGAATTTGCTGAAAATGATGCTAGGATTCTTTCTGGAAAGAAAACCTCTACACACCATACTGAATCACATGCTAATGTCAAGAATGTTATCAATTCAGAGGATGAGATGAAACAAGTGGTACAGTCTACGAATGATAGAAAGAAAATGGAATCAAGATCAGCTGCTTCTGAGATAGGGACACATATAACATCTCCTCTTGCTGAGACTAATGATCCAAACAAACGCCCAGCAATTGTCTGCGACTTTTACGCAAAAGGTTGGTGCATTAGAGGTACTTCATGTAGGTTTATCCATACAAAAGATAGTCCAAAGAATAGTCATCCACAACCTGAGGGAGATGTTGCTGCTGCAAGTTGCAGTAGAGAAGTCAAGGTTGATGAAGGTCCAAGAGGCATTCATGAGAGATCAAGATTGCCTGGTTTTCATGACCCACTGGCTTCTTCTAGTGGAAATGGTTTTCCATTTTCCTCACATCTAGGAATCCCAAGACACCATCAGTTTCAATCAGTTCAACGTGAGGAATCAAATGTGGGTGATTCCGCTGATGTCCAGAAATTGCATTTACCCAAAGATGATCTAGCATTTCCTACCTCCTATAAGGATGTAGGAAAGGATGGTTTTAACAATTCACCTAATAAAAAAGGCAGGTACTCTATAGGAAATACCTCTTCTCATTCAAGCAGTATGGAGGATTTGGCTGGAGTTTGGAGACAACGTGTGCACAGTGATCATACTTCACCACTTGTGAGCCATTCCTTGAATAGCTCAAATACTCTTATAGCTACTGGCTTGTTCCCAAGTAGCCGTATTTCAACTTGGAATGGATTTTCATTGCCCGCAAGTTATTCCAGTTTAGATGCAAATCCTCTGGGTTCTAAAAAGCTCTTAGACAGCAATAGGGATTATCATGCTTATACTAGATCATCTGCCTTTCTGAAAAGCTCTTCTCCCTTCACTAGTTCTGAACTGAACAACTTTCCCCCAATCAGCATTTCACAGCACTCTGCTGAACTTAAAACAAAAATTTCTTCAAACAATTGGGAGCCATCGGTACCCTTCCGGCCATCTTTTATTCTTCCTTCTGATTTTCTATCATTTTCAGCAAAGCAGTATGACCCTCTTCGCGGTAGCATTGAGTTACCCAAGTTAGCTAACAACTCCTTTGAAGCTTTCTACTCTGAAGGGGCAACTGTTGGGAATAGACTGCATCAGAAAGTACTTCCTGAAACTGTCAGTGGGACTCTTCCCCCAGCTTGCGATGCTGATACAAACTCTATGTCTTCTCATAATACATATAATGAGAAGGTATTAGATAACAGCTGCTATACACGTGACCCTAATTCACCTGTAACTGAAGCAGAGACAGTGGGGACTTCTGTTGTCTACCAAAATGGAACCTTGACTAAGGACGAGAATCCCCTGGGCCACTCTCAAGTCAAAGGTAGTACAAATCCAAACAAAATCAGTATCTATGGTGATTCTAGACAAAAAAGTGATGGTTCTAGTCAACAAAGGGATATAAAAGTAGATAGATTTAGAGAAAACAATGAAGCGGAAGTTGAACATTTAACAGATGGGGATGTACAACAAGAGTCAAAAGAAATGAGGCAATTCCGGGCTGCTCTTATAGAATTAGTGAAAGAGTTGTTAAAACCAAAATGGCGTGAAGGTAGTCTCAGCAAGGATGCACACAACAAGATAGTTAAGAAAGCAGTAGACAAGATTCTCAGTGCTTTTCAGCCCCAACAAATCCCACCTACCATAGAAGCAGTTACGCAATATCTGTCTGCTTGCCGTCCAAAAATCTCAAAGCTTGTTGAGGGATATATTGAGAGATATGGCAAGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0010219 GO:0010220 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0065007 GO:0080134

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

743

Amino Acids

82.05

Weight (kDa)

5.7

Isoelectric Point (pI)

47.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003690)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810 FvH4_3g08810
malus_domestica	MD05G1311700.v1.1 MD10G1291300.v1.1
prunus_persica	Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1 Prupe.4G051000_v2.0.a1
pyrus_communis	pycom05g28780 pycom10g24340
rosa_chinensis	RchiOBHm_Chr5g0008951
rosa_laevigata	RLG00000031619
rosa_multiflora	Rmu_sc0004677.1_g000020
rosa_roxburghii	Rroxscaffold_1G00067070 Rroxscaffold_1G00067700
rosa_rugosa	Rorug04G0440500 Rorug04G0440500
rosa_samantha	Rh5AG069200 Rh5BG066000 Rh5CG077000 Rh5DG065000
rosa_wichuraiana	Rw5G006460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1017
Acc65I	GGTACC	1 cut(s)	1432
AccB1I	GGYRCC	1 cut(s)	1432
AccB7I	CCANNNNNTGG	1 cut(s)	103
AccI	GTMKAC	4 cut(s)	93, 506, 1764, 2097
AccII	CGCG	2 cut(s)	38, 1506
AciI	CCGC	5 cut(s)	207, 921, 1218, 1506, 1934
AclWI	GGATC	1 cut(s)	587
AcoI	YGGCCR	1 cut(s)	1442
AcsI	RAATTY	3 cut(s)	142, 383, 1404
AcuI	CTGAAG	3 cut(s)	267, 1581, 1755
AcvI	CACGTG	1 cut(s)	1712
AcyI	GRCGYC	1 cut(s)	18
AfaI	GTAC	9 cut(s)	289, 313, 501, 655, 1031, 1434, 1599, 1828, 1965
AfiI	CCNNNNNNNGG	3 cut(s)	28, 103, 1505
AflIII	ACRYGT	2 cut(s)	1096, 1709
AhlI	ACTAGT	1 cut(s)	1337
AjnI	CCWGG	3 cut(s)	220, 796, 1800
AjuI	GAANNNNNNNTTGG	2 cut(s)	1357, 1389
Alw21I	GWGCWC	1 cut(s)	1104
Alw26I	GTCTC	4 cut(s)	578, 1084, 1736, 2060
Alw44I	GTGCAC	1 cut(s)	1100
AlwI	GGATC	1 cut(s)	587
Ama87I	CYCGRG	1 cut(s)	214
AoxI	GGCC	3 cut(s)	254, 1442, 1804
ApaLI	GTGCAC	1 cut(s)	1100
ApeKI	GCWGC	6 cut(s)	40, 542, 725, 728, 1701, 2000
ApoI	RAATTY	3 cut(s)	142, 383, 1404
ArsI	GACNNNNNNTTYG	2 cut(s)	1643, 1675
Asp718I	GGTACC	1 cut(s)	1432
AspLEI	GCGC	2 cut(s)	34, 40
AspS9I	GGNCC	3 cut(s)	218, 764, 1804
AsuC2I	CCSGG	1 cut(s)	1997
AsuHPI	GGTGA	6 cut(s)	138, 926, 1002, 1110, 1716, 1868
AvaI	CYCGRG	1 cut(s)	214
AvaII	GGWCC	2 cut(s)	218, 764
AxyI	CCTNAGG	1 cut(s)	711
BaeGI	GKGCMC	2 cut(s)	213, 1104
BanI	GGYRCC	1 cut(s)	1432
BbrPI	CACGTG	1 cut(s)	1712
BbsI	GAAGAC	2 cut(s)	75, 1653
Bbv12I	GWGCWC	1 cut(s)	1104
BbvI	GCAGC	6 cut(s)	52, 529, 712, 715, 1688, 1987
BccI	CCATC	6 cut(s)	882, 989, 1435, 1453, 1871, 1949
BceAI	ACGGC	2 cut(s)	1170, 2160
BciT130I	CCWGG	3 cut(s)	222, 798, 1802
BclI	TGATCA	1 cut(s)	1108
BcnI	CCSGG	1 cut(s)	1997
BcoDI	GTCTC	4 cut(s)	578, 1084, 1736, 2060
BcuI	ACTAGT	1 cut(s)	1337
BfaI	CTAG	8 cut(s)	402, 825, 857, 959, 1299, 1338, 1863, 1884
BfmI	CTRYAG	1 cut(s)	1035
BfoI	RGCGCY	1 cut(s)	35
BfuAI	ACCTGC	1 cut(s)	1017
BisI	GCNGC	6 cut(s)	41, 543, 726, 729, 1702, 2001
BlsI	GCNGC	6 cut(s)	42, 544, 727, 730, 1703, 2002
BmcAI	AGTACT	1 cut(s)	1599
Bme1390I	CCNGG	4 cut(s)	222, 798, 1802, 1997
Bme18I	GGWCC	2 cut(s)	218, 764
BmeT110I	CYCGRG	1 cut(s)	214
BmgT120I	GGNCC	3 cut(s)	218, 764, 1804
BmiI	GGNNCC	4 cut(s)	219, 1425, 1434, 1777
BmrFI	CCNGG	4 cut(s)	222, 798, 1802, 1997
BmsI	GCATC	5 cut(s)	388, 1228, 1597, 1630, 2056
BpiI	GAAGAC	2 cut(s)	75, 1653
BpmI	CTGGAG	2 cut(s)	384, 1101
BpuEI	CTTGAG	1 cut(s)	1797
BpuMI	CCSGG	1 cut(s)	1997
BsaAI	YACGTR	1 cut(s)	1712
BsaBI	GATNNNNATC	1 cut(s)	1242
BsaHI	GRCGYC	1 cut(s)	18
BsaJI	CCNNGG	2 cut(s)	1800, 1801
BsaXI	ACNNNNNCTCC	2 cut(s)	1081, 1111
Bsc4I	CCNNNNNNNGG	3 cut(s)	28, 103, 1505
Bse1I	ACTGG	4 cut(s)	108, 819, 1171, 1230
Bse21I	CCTNAGG	1 cut(s)	711
Bse3DI	GCAATG	1 cut(s)	1211
Bse8I	GATNNNNATC	1 cut(s)	1242
BseBI	CCWGG	3 cut(s)	222, 798, 1802
BseDI	CCNNGG	2 cut(s)	1800, 1801
BseGI	GGATG	7 cut(s)	124, 487, 700, 988, 1000, 1966, 2071
BseJI	GATNNNNATC	1 cut(s)	1242
BseLI	CCNNNNNNNGG	3 cut(s)	28, 103, 1505
BseMI	GCAATG	1 cut(s)	1211
BseMII	CTCAG	5 cut(s)	540, 573, 702, 2071, 2122
BseNI	ACTGG	4 cut(s)	108, 819, 1171, 1230
BseRI	GAGGAG	1 cut(s)	564
BseSI	GKGCMC	2 cut(s)	213, 1104
BseXI	GCAGC	6 cut(s)	52, 529, 712, 715, 1688, 1987
BseYI	CCCAGC	2 cut(s)	607, 1630
Bsh1236I	CGCG	2 cut(s)	38, 1506
BshFI	GGCC	3 cut(s)	256, 1444, 1806
BshNI	GGYRCC	1 cut(s)	1432
BsiHKAI	GWGCWC	1 cut(s)	1104
BsiHKCI	CYCGRG	1 cut(s)	214
BsiSI	CCGG	3 cut(s)	29, 1441, 1996
BslFI	GGGAC	5 cut(s)	231, 325, 571, 1633, 1765
BslI	CCNNNNNNNGG	3 cut(s)	28, 103, 1505
BsmAI	GTCTC	4 cut(s)	578, 1084, 1736, 2060
BsmFI	GGGAC	5 cut(s)	231, 325, 571, 1633, 1765
BsmI	GAATGC	1 cut(s)	774
BsnI	GGCC	3 cut(s)	256, 1444, 1806
BsoBI	CYCGRG	1 cut(s)	214
Bsp1286I	GDGCHC	2 cut(s)	213, 1104
Bsp1407I	TGTACA	1 cut(s)	1963
Bsp143I	GATC	6 cut(s)	536, 592, 785, 955, 1108, 1301
BspACI	CCGC	5 cut(s)	207, 921, 1218, 1506, 1934
BspANI	GGCC	3 cut(s)	256, 1444, 1806
BspCNI	CTCAG	5 cut(s)	541, 574, 703, 2070, 2121
BspFNI	CGCG	2 cut(s)	38, 1506
BspHI	TCATGA	2 cut(s)	778, 805
BspLI	GGNNCC	4 cut(s)	219, 1425, 1434, 1777
BspMI	ACCTGC	1 cut(s)	1017
BspPI	GGATC	1 cut(s)	587
BspQI	GCTCTTC	2 cut(s)	232, 1330
BspT107I	GGYRCC	1 cut(s)	1432
BsrDI	GCAATG	1 cut(s)	1211
BsrGI	TGTACA	1 cut(s)	1963
BsrI	ACTGG	4 cut(s)	108, 819, 1171, 1230
BssECI	CCNNGG	2 cut(s)	1800, 1801
BssMI	GATC	6 cut(s)	536, 592, 785, 955, 1108, 1301
BssNI	GRCGYC	1 cut(s)	18
Bst2UI	CCWGG	3 cut(s)	222, 798, 1802
Bst4CI	ACNGT	6 cut(s)	261, 504, 1106, 1573, 1612, 1747
Bst6I	CTCTTC	6 cut(s)	105, 232, 1054, 1330, 1506, 1629
BstACI	GRCGYC	1 cut(s)	18
BstAUI	TGTACA	1 cut(s)	1963
BstBAI	YACGTR	1 cut(s)	1712
BstC8I	GCNNGC	5 cut(s)	36, 209, 1218, 1636, 2173
BstDEI	CTNAG	7 cut(s)	549, 582, 711, 1267, 1785, 2057, 2108
BstF5I	GGATG	7 cut(s)	124, 487, 700, 988, 1000, 1966, 2071
BstFNI	CGCG	2 cut(s)	38, 1506
BstH2I	RGCGCY	1 cut(s)	35
BstHHI	GCGC	2 cut(s)	34, 40
BstKTI	GATC	6 cut(s)	539, 595, 788, 958, 1111, 1304
BstMAI	GTCTC	4 cut(s)	578, 1084, 1736, 2060
BstMBI	GATC	6 cut(s)	536, 592, 785, 955, 1108, 1301
BstMWI	GCNNNNNNNGC	2 cut(s)	40, 1640
BstNI	CCWGG	3 cut(s)	222, 798, 1802
BstNSI	RCATGY	1 cut(s)	452
BstSCI	CCNGG	4 cut(s)	220, 796, 1800, 1995
BstSFI	CTRYAG	1 cut(s)	1035
BstSLI	GKGCMC	2 cut(s)	213, 1104
BstUI	CGCG	2 cut(s)	38, 1506
BstV1I	GCAGC	6 cut(s)	52, 529, 712, 715, 1688, 1987
BstV2I	GAAGAC	2 cut(s)	75, 1653
Bsu36I	CCTNAGG	1 cut(s)	711
BsuRI	GGCC	3 cut(s)	256, 1444, 1806
BtgZI	GCGATG	1 cut(s)	1653
BtsCI	GGATG	7 cut(s)	124, 487, 700, 988, 1000, 1966, 2071
BtsIMutI	CAGTG	5 cut(s)	812, 1111, 1621, 1752, 2116
BveI	ACCTGC	1 cut(s)	1017
Cac8I	GCNNGC	5 cut(s)	36, 209, 1218, 1636, 2173
CciI	TCATGA	2 cut(s)	778, 805
CfoI	GCGC	2 cut(s)	34, 40
Cfr13I	GGNCC	3 cut(s)	218, 764, 1804
CseI	GACGC	1 cut(s)	26
Csp6I	GTAC	9 cut(s)	288, 312, 500, 654, 1030, 1433, 1598, 1827, 1964
CviAII	CATG	6 cut(s)	130, 449, 660, 779, 806, 1289
CviQI	GTAC	9 cut(s)	288, 312, 500, 654, 1030, 1433, 1598, 1827, 1964
DdeI	CTNAG	7 cut(s)	549, 582, 711, 1267, 1785, 2057, 2108
DpnI	GATC	6 cut(s)	538, 594, 787, 957, 1110, 1303
DpnII	GATC	6 cut(s)	536, 592, 785, 955, 1108, 1301
EaeI	YGGCCR	1 cut(s)	1442
Eam1104I	CTCTTC	6 cut(s)	105, 232, 1054, 1330, 1506, 1629
EarI	CTCTTC	6 cut(s)	105, 232, 1054, 1330, 1506, 1629
Eco32I	GATATC	1 cut(s)	136
Eco47I	GGWCC	2 cut(s)	218, 764
Eco57I	CTGAAG	3 cut(s)	267, 1581, 1755
Eco72I	CACGTG	1 cut(s)	1712
Eco81I	CCTNAGG	1 cut(s)	711
Eco88I	CYCGRG	1 cut(s)	214
EcoRII	CCWGG	3 cut(s)	220, 796, 1800
EcoRV	GATATC	1 cut(s)	136
FaeI	CATG	6 cut(s)	133, 452, 663, 782, 809, 1292
FaqI	GGGAC	5 cut(s)	231, 325, 571, 1633, 1765
FatI	CATG	6 cut(s)	129, 448, 659, 778, 805, 1288
FauI	CCCGC	2 cut(s)	200, 1225
FbaI	TGATCA	1 cut(s)	1108
FblI	GTMKAC	4 cut(s)	93, 506, 1764, 2097
Fnu4HI	GCNGC	6 cut(s)	41, 543, 726, 729, 1702, 2001
FokI	GGATG	7 cut(s)	131, 494, 687, 995, 1007, 1973, 2078
Fsp4HI	GCNGC	6 cut(s)	41, 543, 726, 729, 1702, 2001
FspBI	CTAG	8 cut(s)	402, 825, 857, 959, 1299, 1338, 1863, 1884
GlaI	GCGC	2 cut(s)	33, 39
GluI	GCNGC	6 cut(s)	41, 543, 726, 729, 1702, 2001
GsaI	CCCAGC	2 cut(s)	611, 1634
GsuI	CTGGAG	2 cut(s)	384, 1101
HaeII	RGCGCY	1 cut(s)	35
HaeIII	GGCC	3 cut(s)	256, 1444, 1806
HapII	CCGG	3 cut(s)	29, 1441, 1996
HgaI	GACGC	1 cut(s)	26
HhaI	GCGC	2 cut(s)	34, 40
Hin1I	GRCGYC	1 cut(s)	18
Hin1II	CATG	6 cut(s)	133, 452, 663, 782, 809, 1292
Hin6I	GCGC	2 cut(s)	32, 38
HinP1I	GCGC	2 cut(s)	32, 38
HincII	GTYRAC	2 cut(s)	127, 1889
HindII	GTYRAC	2 cut(s)	127, 1889
HindIII	AAGCTT	2 cut(s)	1548, 2192
HpaII	CCGG	3 cut(s)	29, 1441, 1996
HphI	GGTGA	6 cut(s)	138, 926, 1002, 1110, 1716, 1868
Hpy166II	GTNNAC	7 cut(s)	94, 127, 507, 1102, 1765, 1889, 2098
Hpy8I	GTNNAC	7 cut(s)	94, 127, 507, 1102, 1765, 1889, 2098
Hpy99I	CGWCG	8 cut(s)	17, 20, 53, 56, 59, 62, 65, 68
HpyAV	CCTTC	7 cut(s)	755, 1342, 1447, 1470, 1556, 1678, 2042
HpyCH4III	ACNGT	6 cut(s)	261, 504, 1106, 1573, 1612, 1747
HpyCH4IV	ACGT	3 cut(s)	895, 1096, 1711
HpyCH4V	TGCA	8 cut(s)	645, 731, 738, 940, 1102, 1241, 1588, 2069
HpyF10VI	GCNNNNNNNGC	2 cut(s)	40, 1640
HpyF3I	CTNAG	7 cut(s)	549, 582, 711, 1267, 1785, 2057, 2108
HpySE526I	ACGT	3 cut(s)	895, 1096, 1711
Hsp92I	GRCGYC	1 cut(s)	18
Hsp92II	CATG	6 cut(s)	133, 452, 663, 782, 809, 1292
HspAI	GCGC	2 cut(s)	32, 38
KpnI	GGTACC	1 cut(s)	1436
Ksp22I	TGATCA	1 cut(s)	1108
Kzo9I	GATC	6 cut(s)	536, 592, 785, 955, 1108, 1301
LguI	GCTCTTC	2 cut(s)	232, 1330
LmnI	GCTCC	1 cut(s)	1423
Lsp1109I	GCAGC	6 cut(s)	52, 529, 712, 715, 1688, 1987
LweI	GCATC	5 cut(s)	388, 1228, 1597, 1630, 2056
MaeI	CTAG	8 cut(s)	402, 825, 857, 959, 1299, 1338, 1863, 1884
MaeII	ACGT	3 cut(s)	895, 1096, 1711
MaeIII	GTNAC	4 cut(s)	1518, 1712, 1729, 2152
MalI	GATC	6 cut(s)	538, 594, 787, 957, 1110, 1303
MboI	GATC	6 cut(s)	536, 592, 785, 955, 1108, 1301
MfeI	CAATTG	3 cut(s)	270, 612, 1417
MhlI	GDGCHC	2 cut(s)	213, 1104
MlyI	GAGTC	2 cut(s)	1615, 1982
MmeI	TCCRAC	2 cut(s)	36, 72
MseI	TTAA	6 cut(s)	189, 1002, 1395, 1949, 2030, 2085
MslI	CAYNNNNRTG	2 cut(s)	168, 453
MspA1I	CMGCKG	3 cut(s)	542, 923, 1701
MspI	CCGG	3 cut(s)	29, 1441, 1996
MspR9I	CCNGG	4 cut(s)	222, 798, 1802, 1997
MunI	CAATTG	3 cut(s)	270, 612, 1417
Mva1269I	GAATGC	1 cut(s)	774
MvaI	CCWGG	3 cut(s)	222, 798, 1802
MvnI	CGCG	2 cut(s)	38, 1506
MwoI	GCNNNNNNNGC	2 cut(s)	40, 1640
NciI	CCSGG	1 cut(s)	1997
NdeII	GATC	6 cut(s)	536, 592, 785, 955, 1108, 1301
NlaIII	CATG	6 cut(s)	133, 452, 663, 782, 809, 1292
NlaIV	GGNNCC	4 cut(s)	219, 1425, 1434, 1777
NmuCI	GTSAC	1 cut(s)	1712
NspI	RCATGY	1 cut(s)	452
PagI	TCATGA	2 cut(s)	778, 805
PasI	CCCWGGG	1 cut(s)	1801
PciSI	GCTCTTC	2 cut(s)	232, 1330
PcsI	WCGNNNNNNNCGW	4 cut(s)	57, 60, 63, 72
PctI	GAATGC	1 cut(s)	774
PfeI	GAWTC	9 cut(s)	406, 443, 530, 861, 902, 917, 1795, 1859, 2104
PflMI	CCANNNNNTGG	1 cut(s)	103
PkrI	GCNGC	6 cut(s)	42, 544, 727, 730, 1703, 2002
PleI	GAGTC	2 cut(s)	1615, 1981
PmaCI	CACGTG	1 cut(s)	1712
PmlI	CACGTG	1 cut(s)	1712
PpsI	GAGTC	2 cut(s)	1615, 1981
Ppu21I	YACGTR	1 cut(s)	1712
Psp6I	CCWGG	3 cut(s)	220, 796, 1800
PspCI	CACGTG	1 cut(s)	1712
PspFI	CCCAGC	2 cut(s)	607, 1630
PspGI	CCWGG	3 cut(s)	220, 796, 1800
PspN4I	GGNNCC	4 cut(s)	219, 1425, 1434, 1777
PspPI	GGNCC	3 cut(s)	218, 764, 1804
PvuII	CAGCTG	2 cut(s)	542, 1701
RsaI	GTAC	9 cut(s)	289, 313, 501, 655, 1031, 1434, 1599, 1828, 1965
RsaNI	GTAC	9 cut(s)	288, 312, 500, 654, 1030, 1433, 1598, 1827, 1964
RseI	CAYNNNNRTG	2 cut(s)	168, 453
SapI	GCTCTTC	2 cut(s)	232, 1330
SaqAI	TTAA	6 cut(s)	189, 1002, 1395, 1949, 2030, 2085
SatI	GCNGC	6 cut(s)	41, 543, 726, 729, 1702, 2001
Sau3AI	GATC	6 cut(s)	536, 592, 785, 955, 1108, 1301
Sau96I	GGNCC	3 cut(s)	218, 764, 1804
ScaI	AGTACT	1 cut(s)	1599
SchI	GAGTC	2 cut(s)	1615, 1982
ScrFI	CCNGG	4 cut(s)	222, 798, 1802, 1997
SduI	GDGCHC	2 cut(s)	213, 1104
SfaNI	GCATC	5 cut(s)	388, 1228, 1597, 1630, 2056
SfcI	CTRYAG	1 cut(s)	1035
SinI	GGWCC	2 cut(s)	218, 764
SmiMI	CAYNNNNRTG	2 cut(s)	168, 453
SmlI	CTYRAG	1 cut(s)	1812
SmoI	CTYRAG	1 cut(s)	1812
SpeI	ACTAGT	1 cut(s)	1337
SsiI	CCGC	5 cut(s)	207, 921, 1218, 1506, 1934
SspMI	CTAG	8 cut(s)	402, 825, 857, 959, 1299, 1338, 1863, 1884
StyD4I	CCNGG	4 cut(s)	220, 796, 1800, 1995
TaaI	ACNGT	6 cut(s)	261, 504, 1106, 1573, 1612, 1747
TaiI	ACGT	3 cut(s)	898, 1099, 1714
TaqI	TCGA	1 cut(s)	84
TatI	WGTACW	3 cut(s)	1597, 1826, 1963
TfiI	GAWTC	9 cut(s)	406, 443, 530, 861, 902, 917, 1795, 1859, 2104
Tru1I	TTAA	6 cut(s)	189, 1002, 1395, 1949, 2030, 2085
Tru9I	TTAA	6 cut(s)	189, 1002, 1395, 1949, 2030, 2085
TscAI	CASTG	5 cut(s)	819, 1111, 1621, 1752, 2116
TseFI	GTSAC	1 cut(s)	1712
TseI	GCWGC	6 cut(s)	40, 542, 725, 728, 1701, 2000
Tsp45I	GTSAC	1 cut(s)	1712
TspDTI	ATGAA	8 cut(s)	135, 503, 648, 767, 774, 794, 1200, 1944
TspRI	CASTG	5 cut(s)	819, 1111, 1621, 1752, 2116
Van91I	CCANNNNNTGG	1 cut(s)	103
VneI	GTGCAC	1 cut(s)	1100
VpaK11BI	GGWCC	2 cut(s)	218, 764
XapI	RAATTY	3 cut(s)	142, 383, 1404
XbaI	TCTAGA	1 cut(s)	1862
XceI	RCATGY	1 cut(s)	452
XmiI	GTMKAC	4 cut(s)	93, 506, 1764, 2097
XspI	CTAG	8 cut(s)	402, 825, 857, 959, 1299, 1338, 1863, 1884
ZrmI	AGTACT	1 cut(s)	1599

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.