MD05G1311700.v1.1

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0003690
Physical Location & Seq
Forward (+)
44179550 .. 44183520
3971 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1311700.v1.1.491

Sequence Viewer

Length: 2316 bp
ATGCCTCACAGCCGCGATGACCAATCTCTGAAACCGGCCGAATGCTCCGAATACGATATCGAGGAAGAAGAAGAAGAAGACCCCGAGATGTTAGAAGAAGAAGTGGAAGAAGAAGAGGAGGAAGAGCAGGAGGGGGAGGCGGAGGCGGAAGAAGAGGAGGAGGCGGCGGAGGCGGAGGAGGAAGAGGATATGGAAGACGAAGTAGAAGGAAGGGTTGAAGTGGATATGGATATTTCAGATTCACCAATTCAAGCCCATGATCATCAGAACGGCCAGAGAACCTCTGTAGACCTACGCGATGATGGCAACAGTCATCTGTGTAATAGTGAGATTATGGATGCTAAAGCCGCCAGCTCATGTAGCGGGGAAGAGATGGCTGATGCCATCCCGATGAGGGATAATTTAGGTAAGGAGGTTAGAGGTATTGTGAATCCAGAGGATGGGATGAAACAAGTGGACATGCAGCAGAGGAATGATAGAAAGCAAATGGATTCAAGGTTGGGTGCTTTTGAGATAGGGACCACAATTACATCTCCTGCGGTTGAGACTAGTGATCGAAACAAGCACCCAGCTATTATATGTGATTTCCATGCAAAGGGTTGGTGCATTAGAGGTAGTTCTTGTAAATTCGTCCATGTAAAAGATAATCCCAATAGTTCCCAACCACAACCTGAGGGAGATGTTGCTAATTCTACTAGAGAAGTCCAGCTTGATGAAGGTCTAAGAGACATTACTGAGAGATCAAGGTCACCTGGTTTTCGTGACCCTCTGGCCTCTTCAAGTGGAAGTGATTTTGCATTTTCTTCACATCTCACATCTGAAAAGATCCGATTTTTGGAACACATAGGAAGACAGCACCAGTTTCATGAAAAGCGCAAGTTTCCAACAGTTATAGGGGAGGAATCAAATGTGGGCGAGTCCACTGATGCAAAGAAATTGCATTCATCCAAAGATGATCCAGGCTTTCTCTCATCGCTTAAGGATATAGAAAGAGATGATCAGACACGAAATTGGCCTGCTGATAAAGATAAATCTATATTTATGAGCGGTTTGCATCCTGAACCTGGATTTTTTTCAAATGGATCTATTTCATCATCAGGCAAGTACTTTATAAGGAAGAACTCTTCACATTCGAGCGGTGTGGGGGAACCAGATGGAATTTGGAGCCAGCATGTGCACCGTGTTCATAGTTCCCCACTCATGAACCTTGCTTTGAATTCAAGCTCAAGAAATCTTTCAACTACTGGCTTGTTTCCAACTAGCCGTATTTCATCTTGGACTGGATTTTCTTTGCCTTCTAGTTCTTCCAATCTCGATGCAAGTCCTCATGATACTCTTAAGCTTTTTGATCGAAGTAAGGATTACCGGTCTTGTACTAGATTACCTCCCTTGCTGAAAAGCTCTTCTCCCTTCTCTAGTTCTGAGTTGAAAAGTTTTCCTGTGATCAGCGTGTCATTGCACTCTGCTGAAATTAAAACAAAAATTTCTTCAAATGACTGGGAGCCATCTGTGCCTTTCCGGCCATCTTTTATTCTTCCTTGTGCGTTTCTATCATCTTCAGGGAGGCAGTATGACCCTCTTCATGACAGCATTGAGTTACCAAAGTTAGCAAACATCTCTGGTGAAACTTCTTTCTATCCTGAAGGGGCAACCGTTATGAATAAATTGCATCAGCAAATACATGGTGAATCTGCTAGTGGGACCACGCGGCCAGCTTGTGATGGTGATACAAACTCTATGTCTTCACATAATACATATCATGAGAAGGTATTAGATAATAGCTGCTGTATACGTGACCATAATTCACCTGGCACTGAAGCAGAGACAGTGGGGACTTCTGCTGTATGCCTAAAAGGAACCATGACTGGACAAGAAAATCCCTTGGGCCTGTCTCATCTCAAAGGTAGTACAAAACAAAACAAAGCCAGTACGGCGTATGGTGATTCTAGACATGTAAGTGACAGTTCTGGACACCAAGAAGACATAAAAGTAGATAGATTTAGAGATAAGAATGAAGTGGATGGTGAACATTTGACAGACGGGAATGTACAGCAAGAATCAAAAGCTGTGAGGAATTTCCGTGCAGCTCTTGTAGATTTAGTAAAAGAATTGTTAAAACCAAAATGGCGTGAAGGTAGTCTCAGCAAGGATGCACATAACATGATAGTCAAGAGAGCAGTAGAGAAGATTATCAGTGCTTTTCAGCCCCATCAAATCCCACCAACCATAGAAACAGTTATCCAATACTTGTCTGTATGCCGTCCAAAAATCTCAAAGCTTGTTGAGGGATATGTTGTAAAATATGGAAAATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0010219 GO:0010220 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0065007 GO:0080134
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

772

Amino Acids

85.45

Weight (kDa)

5.08

Isoelectric Point (pI)

56.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 193 - 213 9.8e-06 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1112
AccB7I CCANNNNNTGG 1 cut(s) 440
AccBSI CCGCTC 2 cut(s) 1047, 1137
AccI GTMKAC 2 cut(s) 288, 1789
AccII CGCG 3 cut(s) 15, 297, 1708
AclWI GGATC 3 cut(s) 820, 950, 1090
AcoI YGGCCR 4 cut(s) 36, 271, 1520, 1709
AcsI RAATTY 5 cut(s) 626, 1158, 1216, 1482, 2074
AcuI CTGAAG 3 cut(s) 1542, 1662, 1836
AfaI GTAC 5 cut(s) 1106, 1375, 1909, 1930, 2049
AfiI CCNNNNNNNGG 5 cut(s) 394, 440, 595, 835, 1064
AflII CTTAAG 2 cut(s) 977, 1337
AflIII ACRYGT 1 cut(s) 1951
AgeI ACCGGT 1 cut(s) 1365
AhlI ACTAGT 1 cut(s) 548
AjnI CCWGG 4 cut(s) 751, 958, 1063, 1807
Alw21I GWGCWC 1 cut(s) 1179
Alw26I GTCTC 5 cut(s) 539, 720, 1817, 1896, 2144
Alw44I GTGCAC 1 cut(s) 1175
AlwI GGATC 3 cut(s) 820, 950, 1090
Ama87I CYCGRG 1 cut(s) 83
AoxI GGCC 7 cut(s) 36, 271, 771, 1013, 1520, 1709, 1885
ApaLI GTGCAC 1 cut(s) 1175
ApeKI GCWGC 3 cut(s) 463, 1782, 2084
ApoI RAATTY 5 cut(s) 626, 1158, 1216, 1482, 2074
ArsI GACNNNNNNTTYG 2 cut(s) 1724, 1756
AsiGI ACCGGT 1 cut(s) 1365
Asp700I GAANNNNTTC 1 cut(s) 1234
AspLEI GCGC 1 cut(s) 876
AspS9I GGNCC 3 cut(s) 519, 1701, 1885
AsuHPI GGTGA 8 cut(s) 234, 741, 1634, 1697, 1736, 1797, 1952, 2036
AvaI CYCGRG 1 cut(s) 83
AvaII GGWCC 2 cut(s) 519, 1701
AxyI CCTNAGG 1 cut(s) 672
BaeGI GKGCMC 1 cut(s) 1179
BbsI GAAGAC 5 cut(s) 84, 201, 856, 1734, 1986
Bbv12I GWGCWC 1 cut(s) 1179
BbvI GCAGC 3 cut(s) 475, 1769, 2096
BceAI ACGGC 4 cut(s) 286, 1248, 1947, 2244
BciT130I CCWGG 4 cut(s) 753, 960, 1065, 1809
BclI TGATCA 3 cut(s) 259, 997, 1443
BcoDI GTCTC 5 cut(s) 539, 720, 1817, 1896, 2144
BcuI ACTAGT 1 cut(s) 548
BfaI CTAG 8 cut(s) 549, 696, 1260, 1299, 1377, 1416, 1695, 1947
BfmI CTRYAG 1 cut(s) 285
BfrI CTTAAG 2 cut(s) 977, 1337
BglI GCCNNNNNGGC 2 cut(s) 1519, 1931
BisI GCNGC 7 cut(s) 13, 165, 348, 464, 1709, 1783, 2085
BlsI GCNGC 7 cut(s) 14, 166, 349, 465, 1710, 1784, 2086
BmcAI AGTACT 1 cut(s) 1106
Bme1390I CCNGG 4 cut(s) 753, 960, 1065, 1809
Bme18I GGWCC 2 cut(s) 519, 1701
BmeT110I CYCGRG 1 cut(s) 83
BmgT120I GGNCC 3 cut(s) 519, 1701, 1885
BmiI GGNNCC 6 cut(s) 520, 1149, 1166, 1503, 1702, 1858
BmrFI CCNGG 4 cut(s) 753, 960, 1065, 1809
BmrI ACTGGG 1 cut(s) 1507
BmsI GCATC 7 cut(s) 328, 370, 916, 1063, 1306, 1678, 2140
BmuI ACTGGG 1 cut(s) 1507
BpiI GAAGAC 5 cut(s) 84, 201, 856, 1734, 1986
BpuEI CTTGAG 1 cut(s) 1210
BsaAI YACGTR 1 cut(s) 1793
BsaJI CCNNGG 1 cut(s) 1881
BsaWI WCCGGW 1 cut(s) 1365
Bsc4I CCNNNNNNNGG 5 cut(s) 394, 440, 595, 835, 1064
Bse118I RCCGGY 2 cut(s) 34, 1365
Bse1I ACTGG 6 cut(s) 859, 1249, 1285, 1502, 1870, 1926
Bse21I CCTNAGG 1 cut(s) 672
Bse3DI GCAATG 1 cut(s) 1454
BseBI CCWGG 4 cut(s) 753, 960, 1065, 1809
BseDI CCNNGG 1 cut(s) 1881
BseGI GGATG 8 cut(s) 343, 384, 445, 450, 944, 1054, 2026, 2155
BseLI CCNNNNNNNGG 5 cut(s) 394, 440, 595, 835, 1064
BseMI GCAATG 1 cut(s) 1454
BseMII CTCAG 4 cut(s) 663, 726, 1413, 2155
BseNI ACTGG 6 cut(s) 859, 1249, 1285, 1502, 1870, 1926
BseRI GAGGAG 4 cut(s) 131, 170, 173, 191
BseSI GKGCMC 1 cut(s) 1179
BseX3I CGGCCG 1 cut(s) 36
BseXI GCAGC 3 cut(s) 475, 1769, 2096
BseYI CCCAGC 1 cut(s) 568
BsgI GTGCAG 1 cut(s) 2103
Bsh1236I CGCG 3 cut(s) 15, 297, 1708
Bsh1285I CGRYCG 1 cut(s) 39
BshFI GGCC 7 cut(s) 38, 273, 773, 1015, 1522, 1711, 1887
BshTI ACCGGT 1 cut(s) 1365
BsiEI CGRYCG 1 cut(s) 39
BsiHKAI GWGCWC 1 cut(s) 1179
BsiHKCI CYCGRG 1 cut(s) 83
BsiSI CCGG 3 cut(s) 35, 1366, 1519
BslFI GGGAC 3 cut(s) 532, 1714, 1846
BslI CCNNNNNNNGG 5 cut(s) 394, 440, 595, 835, 1064
BsmAI GTCTC 5 cut(s) 539, 720, 1817, 1896, 2144
BsmFI GGGAC 3 cut(s) 532, 1714, 1846
BsmI GAATGC 2 cut(s) 47, 940
BsnI GGCC 7 cut(s) 38, 273, 773, 1015, 1522, 1711, 1887
BsoBI CYCGRG 1 cut(s) 83
Bsp1286I GDGCHC 1 cut(s) 1179
Bsp1407I TGTACA 1 cut(s) 2047
Bsp143I GATC 9 cut(s) 259, 553, 740, 825, 955, 997, 1082, 1348, 1443
BspANI GGCC 7 cut(s) 38, 273, 773, 1015, 1522, 1711, 1887
BspCNI CTCAG 4 cut(s) 664, 727, 1414, 2154
BspFNI CGCG 3 cut(s) 15, 297, 1708
BspHI TCATGA 5 cut(s) 865, 1200, 1327, 1582, 1759
BspLI GGNNCC 6 cut(s) 520, 1149, 1166, 1503, 1702, 1858
BspPI GGATC 3 cut(s) 820, 950, 1090
BspQI GCTCTTC 2 cut(s) 117, 1408
BspTI CTTAAG 2 cut(s) 977, 1337
BsrBI CCGCTC 2 cut(s) 1047, 1137
BsrDI GCAATG 1 cut(s) 1454
BsrFI RCCGGY 2 cut(s) 34, 1365
BsrGI TGTACA 1 cut(s) 2047
BsrI ACTGG 6 cut(s) 859, 1249, 1285, 1502, 1870, 1926
BssAI RCCGGY 2 cut(s) 34, 1365
BssECI CCNNGG 1 cut(s) 1881
BssMI GATC 9 cut(s) 259, 553, 740, 825, 955, 997, 1082, 1348, 1443
BssNAI GTATAC 1 cut(s) 1790
BssT1I CCWWGG 1 cut(s) 1881
Bst1107I GTATAC 1 cut(s) 1790
Bst2UI CCWGG 4 cut(s) 753, 960, 1065, 1809
Bst4CI ACNGT 7 cut(s) 311, 889, 1181, 1654, 1828, 1964, 2236
Bst6I CTCTTC 9 cut(s) 108, 117, 147, 177, 363, 781, 1129, 1408, 1584
BstAFI CTTAAG 2 cut(s) 977, 1337
BstAUI TGTACA 1 cut(s) 2047
BstBAI YACGTR 1 cut(s) 1793
BstC8I GCNNGC 4 cut(s) 352, 1017, 1169, 1713
BstDEI CTNAG 5 cut(s) 672, 722, 735, 1422, 2141
BstEII GGTNACC 1 cut(s) 747
BstF5I GGATG 8 cut(s) 343, 384, 445, 450, 944, 1054, 2026, 2155
BstFNI CGCG 3 cut(s) 15, 297, 1708
BstHHI GCGC 1 cut(s) 876
BstKTI GATC 9 cut(s) 262, 556, 743, 828, 958, 1000, 1085, 1351, 1446
BstMAI GTCTC 5 cut(s) 539, 720, 1817, 1896, 2144
BstMBI GATC 9 cut(s) 259, 553, 740, 825, 955, 997, 1082, 1348, 1443
BstMCI CGRYCG 1 cut(s) 39
BstMWI GCNNNNNNNGC 7 cut(s) 170, 303, 347, 360, 1510, 1519, 1931
BstNI CCWGG 4 cut(s) 753, 960, 1065, 1809
BstNSI RCATGY 3 cut(s) 463, 1175, 1955
BstPI GGTNACC 1 cut(s) 747
BstSCI CCNGG 4 cut(s) 751, 958, 1063, 1807
BstSFI CTRYAG 1 cut(s) 285
BstSLI GKGCMC 1 cut(s) 1179
BstUI CGCG 3 cut(s) 15, 297, 1708
BstV1I GCAGC 3 cut(s) 475, 1769, 2096
BstV2I GAAGAC 5 cut(s) 84, 201, 856, 1734, 1986
BstX2I RGATCY 2 cut(s) 825, 1082
BstYI RGATCY 2 cut(s) 825, 1082
BstZ17I GTATAC 1 cut(s) 1790
BstZI CGGCCG 1 cut(s) 36
Bsu36I CCTNAGG 1 cut(s) 672
BsuRI GGCC 7 cut(s) 38, 273, 773, 1015, 1522, 1711, 1887
BtgZI GCGATG 3 cut(s) 30, 312, 957
BtsCI GGATG 8 cut(s) 343, 384, 445, 450, 944, 1054, 2026, 2155
BtsIMutI CAGTG 4 cut(s) 921, 1812, 1833, 2200
Cac8I GCNNGC 4 cut(s) 352, 1017, 1169, 1713
CciI TCATGA 5 cut(s) 865, 1200, 1327, 1582, 1759
CfoI GCGC 1 cut(s) 876
Cfr10I RCCGGY 2 cut(s) 34, 1365
Cfr13I GGNCC 3 cut(s) 519, 1701, 1885
CsiI ACCWGGT 1 cut(s) 751
Csp6I GTAC 5 cut(s) 1105, 1374, 1908, 1929, 2048
CspAI ACCGGT 1 cut(s) 1365
CviQI GTAC 5 cut(s) 1105, 1374, 1908, 1929, 2048
DdeI CTNAG 5 cut(s) 672, 722, 735, 1422, 2141
DpnI GATC 9 cut(s) 261, 555, 742, 827, 957, 999, 1084, 1350, 1445
DpnII GATC 9 cut(s) 259, 553, 740, 825, 955, 997, 1082, 1348, 1443
EaeI YGGCCR 4 cut(s) 36, 271, 1520, 1709
EagI CGGCCG 1 cut(s) 36
Eam1104I CTCTTC 9 cut(s) 108, 117, 147, 177, 363, 781, 1129, 1408, 1584
EarI CTCTTC 9 cut(s) 108, 117, 147, 177, 363, 781, 1129, 1408, 1584
EciI GGCGGA 4 cut(s) 155, 161, 182, 188
EclXI CGGCCG 1 cut(s) 36
Eco130I CCWWGG 1 cut(s) 1881
Eco32I GATATC 1 cut(s) 58
Eco47I GGWCC 2 cut(s) 519, 1701
Eco52I CGGCCG 1 cut(s) 36
Eco57I CTGAAG 3 cut(s) 1542, 1662, 1836
Eco81I CCTNAGG 1 cut(s) 672
Eco88I CYCGRG 1 cut(s) 83
Eco91I GGTNACC 1 cut(s) 747
EcoO65I GGTNACC 1 cut(s) 747
EcoRI GAATTC 1 cut(s) 1216
EcoRII CCWGG 4 cut(s) 751, 958, 1063, 1807
EcoRV GATATC 1 cut(s) 58
EcoT14I CCWWGG 1 cut(s) 1881
ErhI CCWWGG 1 cut(s) 1881
FalI AAGNNNNNCTT 2 cut(s) 693, 725
FaqI GGGAC 3 cut(s) 532, 1714, 1846
FauI CCCGC 1 cut(s) 356
FbaI TGATCA 3 cut(s) 259, 997, 1443
FblI GTMKAC 2 cut(s) 288, 1789
Fnu4HI GCNGC 7 cut(s) 13, 165, 348, 464, 1709, 1783, 2085
FokI GGATG 8 cut(s) 350, 371, 452, 457, 931, 1041, 2033, 2162
Fsp4HI GCNGC 7 cut(s) 13, 165, 348, 464, 1709, 1783, 2085
FspBI CTAG 8 cut(s) 549, 696, 1260, 1299, 1377, 1416, 1695, 1947
GlaI GCGC 1 cut(s) 875
GluI GCNGC 7 cut(s) 13, 165, 348, 464, 1709, 1783, 2085
GsaI CCCAGC 1 cut(s) 572
HaeIII GGCC 7 cut(s) 38, 273, 773, 1015, 1522, 1711, 1887
HapII CCGG 3 cut(s) 35, 1366, 1519
HhaI GCGC 1 cut(s) 876
Hin6I GCGC 1 cut(s) 874
HinP1I GCGC 1 cut(s) 874
HindIII AAGCTT 2 cut(s) 1340, 2276
HinfI GANTC 8 cut(s) 239, 430, 491, 902, 917, 1688, 1943, 2057
HpaII CCGG 3 cut(s) 35, 1366, 1519
HphI GGTGA 8 cut(s) 234, 741, 1634, 1697, 1736, 1797, 1952, 2036
Hpy166II GTNNAC 6 cut(s) 289, 457, 921, 1177, 1790, 2027
Hpy188I TCNGA 8 cut(s) 30, 49, 238, 267, 820, 830, 1002, 1423
Hpy8I GTNNAC 6 cut(s) 289, 457, 921, 1177, 1790, 2027
HpyAV CCTTC 8 cut(s) 200, 204, 710, 1305, 1420, 1637, 1759, 2126
HpyCH4III ACNGT 7 cut(s) 311, 889, 1181, 1654, 1828, 1964, 2236
HpyCH4IV ACGT 1 cut(s) 1792
HpyF10VI GCNNNNNNNGC 7 cut(s) 170, 303, 347, 360, 1510, 1519, 1931
HpyF3I CTNAG 5 cut(s) 672, 722, 735, 1422, 2141
HpySE526I ACGT 1 cut(s) 1792
HspAI GCGC 1 cut(s) 874
Ksp22I TGATCA 3 cut(s) 259, 997, 1443
Kzo9I GATC 9 cut(s) 259, 553, 740, 825, 955, 997, 1082, 1348, 1443
LguI GCTCTTC 2 cut(s) 117, 1408
LmnI GCTCC 3 cut(s) 50, 1164, 1501
Lsp1109I GCAGC 3 cut(s) 475, 1769, 2096
LweI GCATC 7 cut(s) 328, 370, 916, 1063, 1306, 1678, 2140
MabI ACCWGGT 1 cut(s) 751
MaeI CTAG 8 cut(s) 549, 696, 1260, 1299, 1377, 1416, 1695, 1947
MaeII ACGT 1 cut(s) 1792
MaeIII GTNAC 5 cut(s) 747, 761, 1596, 1793, 1958
MalI GATC 9 cut(s) 261, 555, 742, 827, 957, 999, 1084, 1350, 1445
MbiI CCGCTC 2 cut(s) 1047, 1137
MboI GATC 9 cut(s) 259, 553, 740, 825, 955, 997, 1082, 1348, 1443
MflI RGATCY 2 cut(s) 825, 1082
MhlI GDGCHC 1 cut(s) 1179
MlyI GAGTC 1 cut(s) 926
MmeI TCCRAC 2 cut(s) 908, 1280
MroXI GAANNNNTTC 1 cut(s) 1234
MseI TTAA 4 cut(s) 978, 1338, 1473, 2114
MslI CAYNNNNRTG 2 cut(s) 389, 1956
MspCI CTTAAG 2 cut(s) 977, 1337
MspI CCGG 3 cut(s) 35, 1366, 1519
MspR9I CCNGG 4 cut(s) 753, 960, 1065, 1809
Mva1269I GAATGC 2 cut(s) 47, 940
MvaI CCWGG 4 cut(s) 753, 960, 1065, 1809
MvnI CGCG 3 cut(s) 15, 297, 1708
MwoI GCNNNNNNNGC 7 cut(s) 170, 303, 347, 360, 1510, 1519, 1931
NdeII GATC 9 cut(s) 259, 553, 740, 825, 955, 997, 1082, 1348, 1443
NlaIV GGNNCC 6 cut(s) 520, 1149, 1166, 1503, 1702, 1858
NmuCI GTSAC 4 cut(s) 747, 761, 1793, 1958
NspI RCATGY 3 cut(s) 463, 1175, 1955
PagI TCATGA 5 cut(s) 865, 1200, 1327, 1582, 1759
PciI ACATGT 1 cut(s) 1951
PciSI GCTCTTC 2 cut(s) 117, 1408
PctI GAATGC 2 cut(s) 47, 940
PdmI GAANNNNTTC 1 cut(s) 1234
PfeI GAWTC 7 cut(s) 239, 430, 491, 902, 1688, 1943, 2057
PflMI CCANNNNNTGG 1 cut(s) 440
PinAI ACCGGT 1 cut(s) 1365
PkrI GCNGC 7 cut(s) 14, 166, 349, 465, 1710, 1784, 2086
PleI GAGTC 1 cut(s) 925
PpsI GAGTC 1 cut(s) 925
Ppu21I YACGTR 1 cut(s) 1793
PscI ACATGT 1 cut(s) 1951
PsiI TTATAA 1 cut(s) 1112
Psp6I CCWGG 4 cut(s) 751, 958, 1063, 1807
PspEI GGTNACC 1 cut(s) 747
PspFI CCCAGC 1 cut(s) 568
PspGI CCWGG 4 cut(s) 751, 958, 1063, 1807
PspN4I GGNNCC 6 cut(s) 520, 1149, 1166, 1503, 1702, 1858
PspPI GGNCC 3 cut(s) 519, 1701, 1885
PsuI RGATCY 2 cut(s) 825, 1082
RsaI GTAC 5 cut(s) 1106, 1375, 1909, 1930, 2049
RsaNI GTAC 5 cut(s) 1105, 1374, 1908, 1929, 2048
RseI CAYNNNNRTG 2 cut(s) 389, 1956
SapI GCTCTTC 2 cut(s) 117, 1408
SaqAI TTAA 4 cut(s) 978, 1338, 1473, 2114
SatI GCNGC 7 cut(s) 13, 165, 348, 464, 1709, 1783, 2085
Sau3AI GATC 9 cut(s) 259, 553, 740, 825, 955, 997, 1082, 1348, 1443
Sau96I GGNCC 3 cut(s) 519, 1701, 1885
ScaI AGTACT 1 cut(s) 1106
SchI GAGTC 1 cut(s) 926
ScrFI CCNGG 4 cut(s) 753, 960, 1065, 1809
SduI GDGCHC 1 cut(s) 1179
SexAI ACCWGGT 1 cut(s) 751
SfaNI GCATC 7 cut(s) 328, 370, 916, 1063, 1306, 1678, 2140
SfcI CTRYAG 1 cut(s) 285
SinI GGWCC 2 cut(s) 519, 1701
SmiMI CAYNNNNRTG 2 cut(s) 389, 1956
SmlI CTYRAG 3 cut(s) 977, 1225, 1337
SmoI CTYRAG 3 cut(s) 977, 1225, 1337
SpeI ACTAGT 1 cut(s) 548
SspMI CTAG 8 cut(s) 549, 696, 1260, 1299, 1377, 1416, 1695, 1947
StyD4I CCNGG 4 cut(s) 751, 958, 1063, 1807
StyI CCWWGG 1 cut(s) 1881
TaaI ACNGT 7 cut(s) 311, 889, 1181, 1654, 1828, 1964, 2236
TaiI ACGT 1 cut(s) 1795
TaqI TCGA 5 cut(s) 60, 556, 1133, 1314, 1351
TatI WGTACW 4 cut(s) 1104, 1373, 1907, 2047
TauI GCSGC 4 cut(s) 15, 167, 350, 1711
TfiI GAWTC 7 cut(s) 239, 430, 491, 902, 1688, 1943, 2057
Tru1I TTAA 4 cut(s) 978, 1338, 1473, 2114
Tru9I TTAA 4 cut(s) 978, 1338, 1473, 2114
TscAI CASTG 4 cut(s) 928, 1819, 1833, 2200
TseFI GTSAC 4 cut(s) 747, 761, 1793, 1958
TseI GCWGC 3 cut(s) 463, 1782, 2084
Tsp45I GTSAC 4 cut(s) 747, 761, 1793, 1958
TspGWI ACGGA 1 cut(s) 2069
TspRI CASTG 4 cut(s) 928, 1819, 1833, 2200
Van91I CCANNNNNTGG 1 cut(s) 440
Vha464I CTTAAG 2 cut(s) 977, 1337
VneI GTGCAC 1 cut(s) 1175
VpaK11BI GGWCC 2 cut(s) 519, 1701
XapI RAATTY 5 cut(s) 626, 1158, 1216, 1482, 2074
XbaI TCTAGA 1 cut(s) 1946
XceI RCATGY 3 cut(s) 463, 1175, 1955
XcmI CCANNNNNNNNNTGG 2 cut(s) 1158, 1805
XmiI GTMKAC 2 cut(s) 288, 1789
XmnI GAANNNNTTC 1 cut(s) 1234
XspI CTAG 8 cut(s) 549, 696, 1260, 1299, 1377, 1416, 1695, 1947
ZrmI AGTACT 1 cut(s) 1106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.