FvH4_3g09370

Monothiol

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
5468117 .. 5470486
2370 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g09370.t1

Sequence Viewer

Length: 1470 bp
ATGGGTGGTGGGTCAGTGAAGGACGTGAAATCGAAGCAGGAGCTTGATGGGTTGGTCCAGAGTGGCGCACCGGTTGTGCTTCACTTCTGGGCTTCATGGTGTGAGGCCTCTAAGCACATGGACGAGGTCTTCTCACATCTGTCTACTGATTTCCCTCATGCCCACTTCTTGAGGGTTGAGGCTGAGGAGCAGCCTGAGATTTCTGAGGCTTATGCTGTTTCTGCTGTGCCCTTCTTTGTGTTTTCTAAGGATGGTAAGATTGCTGATAAATTGGAAGGTGCAGATCCATCTAGTTTGGCCAATAAAGTTGCAAAGGTTGCTGGGTCAGTTAACCCTGGAGAACCAGCAGCTCCTGCCAGCCTTGGGATGGCTGCTGGTCCAACTATCCTTGAAACCATTAAAGATTTGGCAAAAGAAAATGGGTCTTCCCAGGTAAAGATTGGAGCCGGTGATACATTGCAAAAGCGGCTGAAGCAGCTGATTGAATCTAATCCAATCATGCTTTTCATGAAAGGGAACCCCGAAGAGCCCAAATGTGGATTCAGCCAAAAAGTCATTGACATTTTGAAGGAAGAGAAGGTCAAGTTTGGAAGTTTCGATATTCTATCAGACAGTGAAGTTAGAGAGGGTTTAAAGAAGTTCTCTAACTGGCCAACATTCCCTCAGCTTTACTGCAAAGGGGAGCTTCTTGGTGGGTGTGACATTGCAATTTCAATGCACGAAAGTGGTGAACTAAAGGAAGTTTTTAGAGACCATGGTATTGGTACTATAGATTTTGCTGGGGCAAATGTGATTGAAGCTGGAAGTGGAAAAGGTGGAACCTCAGCATCTACTGGTTTGAATTCAACTCTAACCTCTCGGCTTGAAAATCTGATTAACTCAAGCCCAGTTATGCTGTTTATGAAGGGAAAACCAGAAGAACCCAAGTGTGGGTTCAGCCGGAAGGTGGTTGATATCCTTTCACAAGAAAAGGTGGAGTTTCAGTGCTTCGATATTCTTTCTGATGAGGAAGTTCGTCAAGGGCTCAAAGTTCATTCAAACTGGTCCAGTTATCCTCAACTATATATCAAGGGTGAACTTATCGGTGGATCAGACATTGTTTTGGAGATGCAGAAAAGTGGAGAACTCAAGAAGGTTTTAGCAGAGAAAGGGATTGTTCCAAAAGATTCTCTTGAAGATCGTTTGAAGAAATTGATTTCTTCATCACCAGTAATGCTCTTCATGAAGGGCACACCGGATGCTCCAAAATGTGGTTTTAGTTCCAAAGTTGTTAATGCCCTGACAGAAGATGGTGTGAGTTTTGGGTCATTCGATATTTTAACTGATGAGGAGGTGAGGCAGGGGCTTAAAGTTTTCTCGAATTGGCCAACCTTTCCTCAGCTGTACTATAAAGGTGAGCTAATTGGAGGATGCGACATTATACTGGAGCTGAAGAACAATGGAGAGCTTAAGGCTACTCTGACGGAGTGA

Protein Analysis

490

Amino Acids

53.07

Weight (kDa)

5.27

Isoelectric Point (pI)

36.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Thioredoxin PF00085 11 - 104 7.1e-15 Thioredoxin
Glutaredoxin PF00462 166 - 229 4.6e-18 Glutaredoxin
Glutaredoxin PF00462 297 - 361 6.3e-18 Glutaredoxin
Glutaredoxin PF00462 404 - 468 1.2e-17 Glutaredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1250
AccI GTMKAC 1 cut(s) 143
AciI CCGC 1 cut(s) 466
AclWI GGATC 2 cut(s) 278, 1096
AcoI YGGCCR 3 cut(s) 297, 650, 1364
AcsI RAATTY 1 cut(s) 841
AcuI CTGAAG 2 cut(s) 491, 1451
AfaI GTAC 2 cut(s) 766, 1385
AfiI CCNNNNNNNGG 7 cut(s) 363, 367, 536, 929, 930, 946, 1250
AflII CTTAAG 1 cut(s) 1448
AgeI ACCGGT 1 cut(s) 70
AjiI CACGTC 1 cut(s) 25
AjnI CCWGG 2 cut(s) 334, 429
AjuI GAANNNNNNNTTGG 4 cut(s) 524, 556, 917, 949
AleI CACNNNNGTG 1 cut(s) 723
Alw26I GTCTC 1 cut(s) 744
AlwI GGATC 2 cut(s) 278, 1096
AlwNI CAGNNNCTG 1 cut(s) 353
AoxI GGCC 4 cut(s) 105, 297, 650, 1364
ApeKI GCWGC 4 cut(s) 190, 347, 371, 475
ApoI RAATTY 1 cut(s) 841
AsiGI ACCGGT 1 cut(s) 70
AspLEI GCGC 1 cut(s) 68
AspS9I GGNCC 3 cut(s) 55, 377, 1044
AsuHPI GGTGA 6 cut(s) 461, 740, 1085, 1197, 1345, 1406
AvaII GGWCC 3 cut(s) 55, 377, 1044
BaeGI GKGCMC 2 cut(s) 231, 1232
BalI TGGCCA 3 cut(s) 299, 652, 1366
BanII GRGCYC 2 cut(s) 531, 1026
BbsI GAAGAC 2 cut(s) 121, 417
BbvCI CCTCAGC 4 cut(s) 183, 663, 823, 1377
BbvI GCAGC 4 cut(s) 202, 358, 359, 487
BccI CCATC 5 cut(s) 41, 245, 295, 361, 1283
BciT130I CCWGG 2 cut(s) 336, 431
BcoDI GTCTC 1 cut(s) 744
BfaI CTAG 1 cut(s) 291
BfmI CTRYAG 1 cut(s) 768
BfrI CTTAAG 1 cut(s) 1448
BisI GCNGC 5 cut(s) 191, 348, 372, 467, 476
BlsI GCNGC 5 cut(s) 192, 349, 373, 468, 477
Bme1390I CCNGG 2 cut(s) 336, 431
Bme18I GGWCC 3 cut(s) 55, 377, 1044
BmgBI CACGTC 1 cut(s) 25
BmgT120I GGNCC 3 cut(s) 55, 377, 1044
BmiI GGNNCC 3 cut(s) 445, 518, 820
BmrFI CCNGG 2 cut(s) 336, 431
BmrI ACTGGG 1 cut(s) 881
BmsI GCATC 4 cut(s) 836, 1098, 1228, 1400
BmuI ACTGGG 1 cut(s) 881
BpiI GAAGAC 2 cut(s) 121, 417
BplI GAGNNNNNCTC 2 cut(s) 116, 148
BpmI CTGGAG 2 cut(s) 357, 1445
Bpu10I CCTNAGC 4 cut(s) 183, 663, 823, 1377
BpuEI CTTGAG 3 cut(s) 190, 865, 1112
BsaI GGTCTC 1 cut(s) 744
BsaJI CCNNGG 4 cut(s) 334, 361, 429, 754
BsaWI WCCGGW 2 cut(s) 70, 1234
BsaXI ACNNNNNCTCC 2 cut(s) 968, 998
Bsc4I CCNNNNNNNGG 7 cut(s) 363, 367, 536, 929, 930, 946, 1250
Bse118I RCCGGY 2 cut(s) 70, 446
Bse1I ACTGG 7 cut(s) 653, 838, 887, 1046, 1047, 1208, 1428
Bse3DI GCAATG 2 cut(s) 455, 702
BseBI CCWGG 2 cut(s) 336, 431
BseDI CCNNGG 4 cut(s) 334, 361, 429, 754
BseGI GGATG 4 cut(s) 256, 372, 1243, 1415
BseLI CCNNNNNNNGG 7 cut(s) 363, 367, 536, 929, 930, 946, 1250
BseMI GCAATG 2 cut(s) 455, 702
BseMII CTCAG 6 cut(s) 174, 186, 195, 677, 837, 1391
BseNI ACTGG 7 cut(s) 653, 838, 887, 1046, 1047, 1208, 1428
BseRI GAGGAG 2 cut(s) 200, 1343
BseSI GKGCMC 2 cut(s) 231, 1232
BseXI GCAGC 4 cut(s) 202, 358, 359, 487
BseYI CCCAGC 2 cut(s) 320, 779
BsgI GTGCAG 1 cut(s) 300
BshFI GGCC 4 cut(s) 107, 299, 652, 1366
BshTI ACCGGT 1 cut(s) 70
BsiSI CCGG 4 cut(s) 71, 447, 940, 1235
BslI CCNNNNNNNGG 7 cut(s) 363, 367, 536, 929, 930, 946, 1250
BsmAI GTCTC 1 cut(s) 744
BsnI GGCC 4 cut(s) 107, 299, 652, 1366
Bso31I GGTCTC 1 cut(s) 744
Bsp1286I GDGCHC 4 cut(s) 231, 531, 1026, 1232
Bsp143I GATC 3 cut(s) 283, 1088, 1177
Bsp19I CCATGG 1 cut(s) 754
BspACI CCGC 1 cut(s) 466
BspANI GGCC 4 cut(s) 107, 299, 652, 1366
BspCNI CTCAG 6 cut(s) 175, 187, 196, 676, 836, 1390
BspHI TCATGA 2 cut(s) 507, 1221
BspLI GGNNCC 3 cut(s) 445, 518, 820
BspPI GGATC 2 cut(s) 278, 1096
BspQI GCTCTTC 2 cut(s) 519, 1223
BspTI CTTAAG 1 cut(s) 1448
BspTNI GGTCTC 1 cut(s) 744
BsrDI GCAATG 2 cut(s) 455, 702
BsrFI RCCGGY 2 cut(s) 70, 446
BsrI ACTGG 7 cut(s) 653, 838, 887, 1046, 1047, 1208, 1428
BssAI RCCGGY 2 cut(s) 70, 446
BssECI CCNNGG 4 cut(s) 334, 361, 429, 754
BssMI GATC 3 cut(s) 283, 1088, 1177
BssT1I CCWWGG 2 cut(s) 361, 754
Bst2UI CCWGG 2 cut(s) 336, 431
Bst4CI ACNGT 1 cut(s) 614
Bst6I CTCTTC 3 cut(s) 519, 567, 1223
BstAFI CTTAAG 1 cut(s) 1448
BstAPI GCANNNNNTGC 2 cut(s) 317, 353
BstC8I GCNNGC 1 cut(s) 358
BstDEI CTNAG 8 cut(s) 111, 183, 195, 204, 246, 663, 823, 1377
BstDSI CCRYGG 1 cut(s) 754
BstF5I GGATG 4 cut(s) 256, 372, 1243, 1415
BstHHI GCGC 1 cut(s) 68
BstKTI GATC 3 cut(s) 286, 1091, 1180
BstMAI GTCTC 1 cut(s) 744
BstMBI GATC 3 cut(s) 283, 1088, 1177
BstMWI GCNNNNNNNGC 6 cut(s) 221, 317, 353, 466, 472, 475
BstNI CCWGG 2 cut(s) 336, 431
BstSCI CCNGG 2 cut(s) 334, 429
BstSFI CTRYAG 1 cut(s) 768
BstSLI GKGCMC 2 cut(s) 231, 1232
BstV1I GCAGC 4 cut(s) 202, 358, 359, 487
BstV2I GAAGAC 2 cut(s) 121, 417
BstX2I RGATCY 1 cut(s) 283
BstXI CCANNNNNNTGG 1 cut(s) 761
BstYI RGATCY 1 cut(s) 283
BsuRI GGCC 4 cut(s) 107, 299, 652, 1366
BtgI CCRYGG 1 cut(s) 754
BtrI CACGTC 1 cut(s) 25
BtsCI GGATG 4 cut(s) 256, 372, 1243, 1415
BtsIMutI CAGTG 3 cut(s) 21, 619, 989
Cac8I GCNNGC 1 cut(s) 358
CaiI CAGNNNCTG 1 cut(s) 353
CciI TCATGA 2 cut(s) 507, 1221
CfoI GCGC 1 cut(s) 68
Cfr10I RCCGGY 2 cut(s) 70, 446
Cfr13I GGNCC 3 cut(s) 55, 377, 1044
Csp6I GTAC 2 cut(s) 765, 1384
CspAI ACCGGT 1 cut(s) 70
CviAII CATG 7 cut(s) 96, 118, 158, 499, 508, 755, 1222
CviQI GTAC 2 cut(s) 765, 1384
DdeI CTNAG 8 cut(s) 111, 183, 195, 204, 246, 663, 823, 1377
DpnI GATC 3 cut(s) 285, 1090, 1179
DpnII GATC 3 cut(s) 283, 1088, 1177
DraI TTTAAA 1 cut(s) 633
EaeI YGGCCR 3 cut(s) 297, 650, 1364
Eam1104I CTCTTC 3 cut(s) 519, 567, 1223
EarI CTCTTC 3 cut(s) 519, 567, 1223
Eco130I CCWWGG 2 cut(s) 361, 754
Eco147I AGGCCT 1 cut(s) 107
Eco24I GRGCYC 2 cut(s) 531, 1026
Eco31I GGTCTC 1 cut(s) 744
Eco32I GATATC 1 cut(s) 955
Eco47I GGWCC 3 cut(s) 55, 377, 1044
Eco57I CTGAAG 2 cut(s) 491, 1451
EcoRI GAATTC 1 cut(s) 841
EcoRII CCWGG 2 cut(s) 334, 429
EcoRV GATATC 1 cut(s) 955
EcoT14I CCWWGG 2 cut(s) 361, 754
EcoT38I GRGCYC 2 cut(s) 531, 1026
ErhI CCWWGG 2 cut(s) 361, 754
FaeI CATG 7 cut(s) 99, 121, 161, 502, 511, 758, 1225
FalI AAGNNNNNCTT 4 cut(s) 669, 701, 1155, 1187
FatI CATG 7 cut(s) 95, 117, 157, 498, 507, 754, 1221
FblI GTMKAC 1 cut(s) 143
Fnu4HI GCNGC 5 cut(s) 191, 348, 372, 467, 476
FokI GGATG 4 cut(s) 263, 379, 1250, 1422
FriOI GRGCYC 2 cut(s) 531, 1026
Fsp4HI GCNGC 5 cut(s) 191, 348, 372, 467, 476
FspBI CTAG 1 cut(s) 291
GlaI GCGC 1 cut(s) 67
GluI GCNGC 5 cut(s) 191, 348, 372, 467, 476
GsaI CCCAGC 2 cut(s) 324, 783
GsuI CTGGAG 2 cut(s) 357, 1445
HaeIII GGCC 4 cut(s) 107, 299, 652, 1366
HapII CCGG 4 cut(s) 71, 447, 940, 1235
HhaI GCGC 1 cut(s) 68
Hin1II CATG 7 cut(s) 99, 121, 161, 502, 511, 758, 1225
Hin6I GCGC 1 cut(s) 66
HinP1I GCGC 1 cut(s) 66
HincII GTYRAC 1 cut(s) 331
HindII GTYRAC 1 cut(s) 331
HinfI GANTC 3 cut(s) 485, 540, 1166
HpaI GTTAAC 1 cut(s) 331
HpaII CCGG 4 cut(s) 71, 447, 940, 1235
HphI GGTGA 6 cut(s) 461, 740, 1085, 1197, 1345, 1406
Hpy166II GTNNAC 4 cut(s) 144, 331, 731, 1076
Hpy188I TCNGA 6 cut(s) 205, 610, 873, 1003, 1093, 1461
Hpy188III TCNNGA 7 cut(s) 58, 169, 508, 1129, 1172, 1222, 1357
Hpy8I GTNNAC 4 cut(s) 144, 331, 731, 1076
HpyAV CCTTC 9 cut(s) 13, 241, 269, 562, 571, 898, 937, 1126, 1219
HpyCH4III ACNGT 1 cut(s) 614
HpyCH4IV ACGT 1 cut(s) 24
HpyCH4V TGCA 7 cut(s) 281, 311, 460, 675, 707, 718, 1111
HpyF10VI GCNNNNNNNGC 6 cut(s) 221, 317, 353, 466, 472, 475
HpyF3I CTNAG 8 cut(s) 111, 183, 195, 204, 246, 663, 823, 1377
HpySE526I ACGT 1 cut(s) 24
Hsp92II CATG 7 cut(s) 99, 121, 161, 502, 511, 758, 1225
HspAI GCGC 1 cut(s) 66
KspAI GTTAAC 1 cut(s) 331
Kzo9I GATC 3 cut(s) 283, 1088, 1177
LguI GCTCTTC 2 cut(s) 519, 1223
LmnI GCTCC 7 cut(s) 40, 187, 355, 443, 682, 1246, 1426
Lsp1109I GCAGC 4 cut(s) 202, 358, 359, 487
LweI GCATC 4 cut(s) 836, 1098, 1228, 1400
MaeI CTAG 1 cut(s) 291
MaeII ACGT 1 cut(s) 24
MaeIII GTNAC 1 cut(s) 698
MalI GATC 3 cut(s) 285, 1090, 1179
MboI GATC 3 cut(s) 283, 1088, 1177
MflI RGATCY 1 cut(s) 283
MhlI GDGCHC 4 cut(s) 231, 531, 1026, 1232
MlsI TGGCCA 3 cut(s) 299, 652, 1366
MluCI AATT 6 cut(s) 269, 708, 841, 1190, 1360, 1401
MluNI TGGCCA 3 cut(s) 299, 652, 1366
MmeI TCCRAC 1 cut(s) 404
Mox20I TGGCCA 3 cut(s) 299, 652, 1366
MscI TGGCCA 3 cut(s) 299, 652, 1366
MseI TTAA 8 cut(s) 330, 399, 632, 876, 1272, 1319, 1347, 1449
MslI CAYNNNNRTG 1 cut(s) 723
Msp20I TGGCCA 3 cut(s) 299, 652, 1366
MspA1I CMGCKG 2 cut(s) 478, 1381
MspCI CTTAAG 1 cut(s) 1448
MspI CCGG 4 cut(s) 71, 447, 940, 1235
MspR9I CCNGG 2 cut(s) 336, 431
MvaI CCWGG 2 cut(s) 336, 431
MwoI GCNNNNNNNGC 6 cut(s) 221, 317, 353, 466, 472, 475
NcoI CCATGG 1 cut(s) 754
NdeII GATC 3 cut(s) 283, 1088, 1177
NlaIII CATG 7 cut(s) 99, 121, 161, 502, 511, 758, 1225
NlaIV GGNNCC 3 cut(s) 445, 518, 820
NmeAIII GCCGAG 1 cut(s) 838
NmuCI GTSAC 1 cut(s) 698
OliI CACNNNNGTG 1 cut(s) 723
PagI TCATGA 2 cut(s) 507, 1221
PceI AGGCCT 1 cut(s) 107
PciSI GCTCTTC 2 cut(s) 519, 1223
PfeI GAWTC 3 cut(s) 485, 540, 1166
PflFI GACNNNGTC 1 cut(s) 125
PflMI CCANNNNNTGG 1 cut(s) 1250
PinAI ACCGGT 1 cut(s) 70
PkrI GCNGC 5 cut(s) 192, 349, 373, 468, 477
Psp6I CCWGG 2 cut(s) 334, 429
PspFI CCCAGC 2 cut(s) 320, 779
PspGI CCWGG 2 cut(s) 334, 429
PspN4I GGNNCC 3 cut(s) 445, 518, 820
PspPI GGNCC 3 cut(s) 55, 377, 1044
PstNI CAGNNNCTG 1 cut(s) 353
PsuI RGATCY 1 cut(s) 283
PsyI GACNNNGTC 1 cut(s) 125
PvuII CAGCTG 2 cut(s) 478, 1381
RsaI GTAC 2 cut(s) 766, 1385
RsaNI GTAC 2 cut(s) 765, 1384
RseI CAYNNNNRTG 1 cut(s) 723
SapI GCTCTTC 2 cut(s) 519, 1223
SaqAI TTAA 8 cut(s) 330, 399, 632, 876, 1272, 1319, 1347, 1449
SatI GCNGC 5 cut(s) 191, 348, 372, 467, 476
Sau3AI GATC 3 cut(s) 283, 1088, 1177
Sau96I GGNCC 3 cut(s) 55, 377, 1044
ScrFI CCNGG 2 cut(s) 336, 431
SduI GDGCHC 4 cut(s) 231, 531, 1026, 1232
SfaNI GCATC 4 cut(s) 836, 1098, 1228, 1400
SfcI CTRYAG 1 cut(s) 768
SinI GGWCC 3 cut(s) 55, 377, 1044
SmiMI CAYNNNNRTG 1 cut(s) 723
SmlI CTYRAG 4 cut(s) 169, 880, 1127, 1448
SmoI CTYRAG 4 cut(s) 169, 880, 1127, 1448
Sse9I AATT 6 cut(s) 269, 708, 841, 1190, 1360, 1401
SseBI AGGCCT 1 cut(s) 107
SsiI CCGC 1 cut(s) 466
SspMI CTAG 1 cut(s) 291
StuI AGGCCT 1 cut(s) 107
StyD4I CCNGG 2 cut(s) 334, 429
StyI CCWWGG 2 cut(s) 361, 754
TaaI ACNGT 1 cut(s) 614
TaiI ACGT 1 cut(s) 27
TaqI TCGA 5 cut(s) 32, 597, 990, 1311, 1358
TasI AATT 6 cut(s) 269, 708, 841, 1190, 1360, 1401
TatI WGTACW 1 cut(s) 1383
TauI GCSGC 1 cut(s) 469
TfiI GAWTC 3 cut(s) 485, 540, 1166
Tru1I TTAA 8 cut(s) 330, 399, 632, 876, 1272, 1319, 1347, 1449
Tru9I TTAA 8 cut(s) 330, 399, 632, 876, 1272, 1319, 1347, 1449
TscAI CASTG 3 cut(s) 21, 619, 989
TseFI GTSAC 1 cut(s) 698
TseI GCWGC 4 cut(s) 190, 347, 371, 475
Tsp45I GTSAC 1 cut(s) 698
TspDTI ATGAA 8 cut(s) 84, 496, 524, 917, 1022, 1191, 1210, 1238
TspRI CASTG 3 cut(s) 21, 619, 989
Tth111I GACNNNGTC 1 cut(s) 125
Van91I CCANNNNNTGG 1 cut(s) 1250
Vha464I CTTAAG 1 cut(s) 1448
VpaK11BI GGWCC 3 cut(s) 55, 377, 1044
XapI RAATTY 1 cut(s) 841
XcmI CCANNNNNNNNNTGG 3 cut(s) 364, 403, 437
XmiI GTMKAC 1 cut(s) 143
XspI CTAG 1 cut(s) 291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.