FvH4_3g10270

Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
5976159 .. 5981123
4965 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g10270.t7

Sequence Viewer

Length: 1500 bp
ATGGACAGTCAGGTTCTGTGTTTTAATCACAGCATTCACTGCTTCGTCAAAACGGTGCCGTTGCAGCGTCTCCAGTTTCATCCACTGCTTGCTCTTCACAAAAGTTCATCTCGCTCTTTTGGACCAGGGTTTGCTTGCAAGGGGATAAGTTGTGCAATGAAGTCATACAGGCTGTCTGAACTTACTCCGGCTGAGGTTCAGAACCTCAAGGCTCGTCCTAGGATTGACTTTTCGTCGATTTTCAGCACGGTGAATCCAATTGTAGATGATATTCGAAATAGAGGTGATGCTGCTGTTAAGGACTATACTGCAAAGTTCGACAAAGTTGAACTGGATAAGATAGTTGTAGAAGTATCTGAGCTTCCAGATCCAGAGCTTGATCCTTCTATTAAAGAAGCATTTGACGTGGCATATGACAATATATATGCATTTCATTTTGCTCAGAAGTCAGCAGAGAAGACTGTTGAGAATATGAAGGGAGTCAAATGTAAACGGGTGGCAAGAAGTATTGGTTCTGTAGGTCTTTATGTTCCAGGAGGAACTGCAGTTTTACCTTCTACTGCTCTGATGCTTGCAGTTCCTGCTCAGATTGCTGGATCTAAAACTGTTGTACTTGCTACTCCTCCAAGTCGGGATGGCAGTATATGCAAGGAAGTACTCTACTGTGCTAAGAAGGCTGGTGTAACTCACATCCTTAAAGCTGGTGGTGCTCAGGCGATATCTGCTATGGCTTGGGGTACAGAAACTTGCCCGAAGGTCGAAAAAATTTTTGGCCCTGGAAATCAGTATGTAACAGCAGCGAAAATGATTCTCCAACCCTTCCTCTATTTATTCTGTCAACAGAACAGTGAAGCCATGATCTCAATTGACATGCCAGCAGGCCCTTCTGAAGTTTTGGTCATTGCGGACAAGCATGCCAGTCCTGTTCATGTAGCCGCAGATTTACTTTCTCAGGCTGAGCATGGCCCTGATAGTCAAGTTGTTCTTGTAATTGCGGGAGATGGTGTTGATATTAAAGCTATAGAGGAGGAAGTTAAGAAGCAGTGCGACAGCCTACCAAGGGGAGATTTTGCCTCAAAAGCACTGAGCCACAGTTTCACAGTGTTTGCTCGTGATATGGTTGAGGCTGTGTCTTTCTCAAACTTATATGCACCCGAGCATCTGATCATCAATGTCAATGATGCAGAAAAGTGGGAGAGTTTCATTGAGAATGCAGGTTCTGTGTTTTTAGGGCCGTGGACTCCAGAGAGTGTTGGAGATTATGCTAGTGGGACAAACCATGTCCTTCCAACATATGGCTATGCACGGATGTATGGTGGTGTGTCTTTAGACTCCTTCCTTAAGTACATGACCGTACAATCTCTAACAGAGGAAGGTCTGCAAAAGCTTGGCCCCTATGTAGCCACGATGGCTGAAGTTGAGGGATTAGAGGCCCACAAGAGAGCCGTAACCCTTAGACTCAAAGATATTGAAGCCAGGCAGGTTCCAAACAGCAGGTGA

Protein Analysis

500

Amino Acids

54.18

Weight (kDa)

6.14

Isoelectric Point (pI)

42.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Histidinol_dh PF00815 20 - 426 6.8e-158 Histidinol dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1485
Acc36I ACCTGC 3 cut(s) 1205, 1471, 1485
AccB1I GGYRCC 1 cut(s) 55
AccB7I CCANNNNNTGG 1 cut(s) 1295
AciI CCGC 3 cut(s) 905, 936, 995
AclWI GGATC 3 cut(s) 362, 374, 604
AcsI RAATTY 1 cut(s) 765
AcuI CTGAAG 2 cut(s) 909, 1434
AfaI GTAC 5 cut(s) 612, 657, 739, 1346, 1356
AfiI CCNNNNNNNGG 2 cut(s) 1060, 1295
AflII CTTAAG 1 cut(s) 1340
AgsI TTSAA 2 cut(s) 329, 1472
AhdI GACNNNNNGTC 1 cut(s) 232
AjiI CACGTC 1 cut(s) 406
AjnI CCWGG 4 cut(s) 124, 532, 775, 1475
AjuI GAANNNNNNNTTGG 2 cut(s) 753, 785
AluBI AGCT 5 cut(s) 361, 376, 701, 1019, 1387
AluI AGCT 5 cut(s) 361, 376, 701, 1019, 1387
Alw21I GWGCWC 1 cut(s) 712
Alw26I GTCTC 1 cut(s) 74
AlwI GGATC 3 cut(s) 362, 374, 604
AlwNI CAGNNNCTG 3 cut(s) 16, 581, 1220
Ama87I CYCGRG 1 cut(s) 1154
AoxI GGCC 6 cut(s) 772, 880, 964, 1232, 1390, 1431
ApeKI GCWGC 3 cut(s) 64, 290, 797
ApoI RAATTY 1 cut(s) 765
AspA2I CCTAGG 1 cut(s) 218
AspS9I GGNCC 7 cut(s) 122, 773, 881, 965, 1232, 1391, 1432
AsuHPI GGTGA 2 cut(s) 262, 296
AsuII TTCGAA 1 cut(s) 274
AvaI CYCGRG 1 cut(s) 1154
AvaII GGWCC 1 cut(s) 122
AvrII CCTAGG 1 cut(s) 218
BanI GGYRCC 1 cut(s) 55
BarI GAAGNNNNNNTAC 2 cut(s) 345, 377
BauI CACGAG 1 cut(s) 1110
BbsI GAAGAC 1 cut(s) 464
Bbv12I GWGCWC 1 cut(s) 712
BbvCI CCTCAGC 1 cut(s) 192
BbvI GCAGC 3 cut(s) 76, 277, 809
BccI CCATC 3 cut(s) 629, 995, 1402
BceAI ACGGC 3 cut(s) 43, 1219, 1430
BciT130I CCWGG 4 cut(s) 126, 534, 777, 1477
BclI TGATCA 1 cut(s) 1164
BcoDI GTCTC 1 cut(s) 74
BfaI CTAG 2 cut(s) 219, 1266
BfmI CTRYAG 3 cut(s) 516, 543, 1020
BfrI CTTAAG 1 cut(s) 1340
BfuAI ACCTGC 3 cut(s) 1205, 1471, 1485
BglI GCCNNNNNGGC 1 cut(s) 1409
BisI GCNGC 4 cut(s) 65, 291, 798, 936
BlnI CCTAGG 1 cut(s) 218
BlpI GCTNAGC 1 cut(s) 957
BlsI GCNGC 4 cut(s) 66, 292, 799, 937
BmcAI AGTACT 1 cut(s) 657
Bme1390I CCNGG 4 cut(s) 126, 534, 777, 1477
Bme18I GGWCC 1 cut(s) 122
BmeRI GACNNNNNGTC 1 cut(s) 232
BmeT110I CYCGRG 1 cut(s) 1154
BmgBI CACGTC 1 cut(s) 406
BmgT120I GGNCC 7 cut(s) 122, 773, 881, 965, 1232, 1391, 1432
BmiI GGNNCC 3 cut(s) 57, 1393, 1485
BmrFI CCNGG 4 cut(s) 126, 534, 777, 1477
BmsI GCATC 4 cut(s) 277, 558, 1168, 1171
BpiI GAAGAC 1 cut(s) 464
BpmI CTGGAG 2 cut(s) 56, 1227
Bpu10I CCTNAGC 2 cut(s) 192, 711
Bpu1102I GCTNAGC 1 cut(s) 957
Bpu14I TTCGAA 1 cut(s) 274
BpuEI CTTGAG 1 cut(s) 191
BsaJI CCNNGG 5 cut(s) 125, 218, 775, 1058, 1235
BsaXI ACNNNNNCTCC 2 cut(s) 990, 1020
Bsc4I CCNNNNNNNGG 2 cut(s) 1060, 1295
Bse1I ACTGG 3 cut(s) 73, 336, 918
Bse3DI GCAATG 2 cut(s) 162, 900
BseBI CCWGG 4 cut(s) 126, 534, 777, 1477
BseDI CCNNGG 5 cut(s) 125, 218, 775, 1058, 1235
BseGI GGATG 4 cut(s) 79, 640, 690, 1314
BseLI CCNNNNNNNGG 2 cut(s) 1060, 1295
BseMI GCAATG 2 cut(s) 162, 900
BseMII CTCAG 8 cut(s) 183, 348, 455, 599, 725, 948, 965, 1076
BseNI ACTGG 3 cut(s) 73, 336, 918
BseRI GAGGAG 2 cut(s) 612, 1040
BseXI GCAGC 3 cut(s) 76, 277, 809
BshFI GGCC 6 cut(s) 774, 882, 966, 1234, 1392, 1433
BshNI GGYRCC 1 cut(s) 55
BsiHKAI GWGCWC 1 cut(s) 712
BsiHKCI CYCGRG 1 cut(s) 1154
BsiSI CCGG 1 cut(s) 188
BslFI GGGAC 1 cut(s) 1285
BslI CCNNNNNNNGG 2 cut(s) 1060, 1295
BsmAI GTCTC 1 cut(s) 74
BsmBI CGTCTC 1 cut(s) 74
BsmFI GGGAC 1 cut(s) 1285
BsmI GAATGC 2 cut(s) 33, 1216
BsnI GGCC 6 cut(s) 774, 882, 966, 1234, 1392, 1433
BsoBI CYCGRG 1 cut(s) 1154
Bsp119I TTCGAA 1 cut(s) 274
Bsp1286I GDGCHC 1 cut(s) 712
Bsp143I GATC 5 cut(s) 367, 379, 596, 858, 1164
Bsp1720I GCTNAGC 1 cut(s) 957
BspACI CCGC 3 cut(s) 905, 936, 995
BspANI GGCC 6 cut(s) 774, 882, 966, 1234, 1392, 1433
BspCNI CTCAG 8 cut(s) 184, 349, 454, 598, 724, 949, 964, 1077
BspLI GGNNCC 3 cut(s) 57, 1393, 1485
BspMAI CTGCAG 1 cut(s) 547
BspMI ACCTGC 3 cut(s) 1205, 1471, 1485
BspPI GGATC 3 cut(s) 362, 374, 604
BspQI GCTCTTC 1 cut(s) 99
BspT104I TTCGAA 1 cut(s) 274
BspT107I GGYRCC 1 cut(s) 55
BspTI CTTAAG 1 cut(s) 1340
BsrDI GCAATG 2 cut(s) 162, 900
BsrI ACTGG 3 cut(s) 73, 336, 918
BssECI CCNNGG 5 cut(s) 125, 218, 775, 1058, 1235
BssMI GATC 5 cut(s) 367, 379, 596, 858, 1164
BssSI CACGAG 1 cut(s) 1110
BssT1I CCWWGG 2 cut(s) 218, 1058
Bst2BI CACGAG 1 cut(s) 1110
Bst2UI CCWGG 4 cut(s) 126, 534, 777, 1477
Bst6I CTCTTC 1 cut(s) 99
BstAFI CTTAAG 1 cut(s) 1340
BstAPI GCANNNNNTGC 3 cut(s) 39, 581, 645
BstBI TTCGAA 1 cut(s) 274
BstC8I GCNNGC 6 cut(s) 90, 136, 573, 876, 880, 915
BstDSI CCRYGG 1 cut(s) 1235
BstF5I GGATG 4 cut(s) 79, 640, 690, 1314
BstKTI GATC 5 cut(s) 370, 382, 599, 861, 1167
BstMAI GTCTC 1 cut(s) 74
BstMBI GATC 5 cut(s) 367, 379, 596, 858, 1164
BstNI CCWGG 4 cut(s) 126, 534, 777, 1477
BstNSI RCATGY 2 cut(s) 874, 917
BstSCI CCNGG 4 cut(s) 124, 532, 775, 1475
BstSFI CTRYAG 3 cut(s) 516, 543, 1020
BstV1I GCAGC 3 cut(s) 76, 277, 809
BstV2I GAAGAC 1 cut(s) 464
BstX2I RGATCY 2 cut(s) 367, 596
BstYI RGATCY 2 cut(s) 367, 596
BsuRI GGCC 6 cut(s) 774, 882, 966, 1234, 1392, 1433
BtgI CCRYGG 1 cut(s) 1235
BtrI CACGTC 1 cut(s) 406
BtsCI GGATG 4 cut(s) 79, 640, 690, 1314
BtsI GCAGTG 3 cut(s) 37, 83, 1049
BtsIMutI CAGTG 6 cut(s) 37, 83, 853, 1049, 1082, 1107
BveI ACCTGC 3 cut(s) 1205, 1471, 1485
Cac8I GCNNGC 6 cut(s) 90, 136, 573, 876, 880, 915
CaiI CAGNNNCTG 3 cut(s) 16, 581, 1220
Cfr13I GGNCC 7 cut(s) 122, 773, 881, 965, 1232, 1391, 1432
CseI GACGC 1 cut(s) 56
Csp6I GTAC 5 cut(s) 611, 656, 738, 1345, 1355
CviAII CATG 7 cut(s) 856, 871, 914, 929, 962, 1280, 1348
CviQI GTAC 5 cut(s) 611, 656, 738, 1345, 1355
DpnI GATC 5 cut(s) 369, 381, 598, 860, 1166
DpnII GATC 5 cut(s) 367, 379, 596, 858, 1164
DriI GACNNNNNGTC 1 cut(s) 232
Eam1104I CTCTTC 1 cut(s) 99
Eam1105I GACNNNNNGTC 1 cut(s) 232
EarI CTCTTC 1 cut(s) 99
Eco130I CCWWGG 2 cut(s) 218, 1058
Eco32I GATATC 1 cut(s) 720
Eco47I GGWCC 1 cut(s) 122
Eco57I CTGAAG 2 cut(s) 909, 1434
Eco88I CYCGRG 1 cut(s) 1154
EcoO109I RGGNCCY 1 cut(s) 881
EcoRII CCWGG 4 cut(s) 124, 532, 775, 1475
EcoRV GATATC 1 cut(s) 720
EcoT14I CCWWGG 2 cut(s) 218, 1058
EcoT22I ATGCAT 1 cut(s) 430
ErhI CCWWGG 2 cut(s) 218, 1058
Esp3I CGTCTC 1 cut(s) 74
FaeI CATG 7 cut(s) 859, 874, 917, 932, 965, 1283, 1351
FalI AAGNNNNNCTT 2 cut(s) 969, 1001
FaqI GGGAC 1 cut(s) 1285
FatI CATG 7 cut(s) 855, 870, 913, 928, 961, 1279, 1347
FauI CCCGC 1 cut(s) 988
FauNDI CATATG 2 cut(s) 412, 1294
FbaI TGATCA 1 cut(s) 1164
Fnu4HI GCNGC 4 cut(s) 65, 291, 798, 936
FokI GGATG 4 cut(s) 66, 647, 677, 1321
Fsp4HI GCNGC 4 cut(s) 65, 291, 798, 936
FspBI CTAG 2 cut(s) 219, 1266
GluI GCNGC 4 cut(s) 65, 291, 798, 936
GsuI CTGGAG 2 cut(s) 56, 1227
HaeIII GGCC 6 cut(s) 774, 882, 966, 1234, 1392, 1433
HapII CCGG 1 cut(s) 188
HgaI GACGC 1 cut(s) 56
Hin1II CATG 7 cut(s) 859, 874, 917, 932, 965, 1283, 1351
HincII GTYRAC 1 cut(s) 839
HindII GTYRAC 1 cut(s) 839
HindIII AAGCTT 1 cut(s) 1385
HinfI GANTC 6 cut(s) 253, 480, 808, 1240, 1331, 1458
HpaII CCGG 1 cut(s) 188
HphI GGTGA 2 cut(s) 262, 296
Hpy166II GTNNAC 3 cut(s) 491, 839, 1239
Hpy188I TCNGA 8 cut(s) 178, 201, 358, 444, 567, 588, 889, 1164
Hpy188III TCNNGA 5 cut(s) 365, 371, 632, 1112, 1244
Hpy8I GTNNAC 3 cut(s) 491, 839, 1239
Hpy99I CGWCG 1 cut(s) 238
HpyCH4IV ACGT 1 cut(s) 405
HpySE526I ACGT 1 cut(s) 405
Hsp92II CATG 7 cut(s) 859, 874, 917, 932, 965, 1283, 1351
Ksp22I TGATCA 1 cut(s) 1164
Kzo9I GATC 5 cut(s) 367, 379, 596, 858, 1164
LguI GCTCTTC 1 cut(s) 99
Lsp1109I GCAGC 3 cut(s) 76, 277, 809
LweI GCATC 4 cut(s) 277, 558, 1168, 1171
MaeI CTAG 2 cut(s) 219, 1266
MaeII ACGT 1 cut(s) 405
MaeIII GTNAC 3 cut(s) 682, 790, 1447
MalI GATC 5 cut(s) 369, 381, 598, 860, 1166
MboI GATC 5 cut(s) 367, 379, 596, 858, 1164
MboII GAAGA 2 cut(s) 86, 469
MfeI CAATTG 2 cut(s) 258, 864
MflI RGATCY 2 cut(s) 367, 596
MhlI GDGCHC 1 cut(s) 712
MluCI AATT 4 cut(s) 258, 765, 864, 990
MlyI GAGTC 4 cut(s) 489, 1234, 1325, 1452
MmeI TCCRAC 3 cut(s) 838, 1234, 1313
Mph1103I ATGCAT 1 cut(s) 430
MseI TTAA 7 cut(s) 24, 297, 390, 696, 1014, 1035, 1341
MspCI CTTAAG 1 cut(s) 1340
MspI CCGG 1 cut(s) 188
MspR9I CCNGG 4 cut(s) 126, 534, 777, 1477
MunI CAATTG 2 cut(s) 258, 864
Mva1269I GAATGC 2 cut(s) 33, 1216
MvaI CCWGG 4 cut(s) 126, 534, 777, 1477
NdeI CATATG 2 cut(s) 412, 1294
NdeII GATC 5 cut(s) 367, 379, 596, 858, 1164
NlaIII CATG 7 cut(s) 859, 874, 917, 932, 965, 1283, 1351
NlaIV GGNNCC 3 cut(s) 57, 1393, 1485
NsiI ATGCAT 1 cut(s) 430
NspI RCATGY 2 cut(s) 874, 917
NspV TTCGAA 1 cut(s) 274
PaeI GCATGC 1 cut(s) 917
PaqCI CACCTGC 1 cut(s) 1485
PciSI GCTCTTC 1 cut(s) 99
PctI GAATGC 2 cut(s) 33, 1216
PfeI GAWTC 2 cut(s) 253, 808
PflMI CCANNNNNTGG 1 cut(s) 1295
PfoI TCCNGGA 1 cut(s) 532
PkrI GCNGC 4 cut(s) 66, 292, 799, 937
PleI GAGTC 4 cut(s) 488, 1234, 1325, 1452
PpsI GAGTC 4 cut(s) 488, 1234, 1325, 1452
Psp6I CCWGG 4 cut(s) 124, 532, 775, 1475
PspGI CCWGG 4 cut(s) 124, 532, 775, 1475
PspN4I GGNNCC 3 cut(s) 57, 1393, 1485
PspPI GGNCC 7 cut(s) 122, 773, 881, 965, 1232, 1391, 1432
PstI CTGCAG 1 cut(s) 547
PstNI CAGNNNCTG 3 cut(s) 16, 581, 1220
PsuI RGATCY 2 cut(s) 367, 596
RsaI GTAC 5 cut(s) 612, 657, 739, 1346, 1356
RsaNI GTAC 5 cut(s) 611, 656, 738, 1345, 1355
SapI GCTCTTC 1 cut(s) 99
SaqAI TTAA 7 cut(s) 24, 297, 390, 696, 1014, 1035, 1341
SatI GCNGC 4 cut(s) 65, 291, 798, 936
Sau3AI GATC 5 cut(s) 367, 379, 596, 858, 1164
Sau96I GGNCC 7 cut(s) 122, 773, 881, 965, 1232, 1391, 1432
ScaI AGTACT 1 cut(s) 657
SchI GAGTC 4 cut(s) 489, 1234, 1325, 1452
ScrFI CCNGG 4 cut(s) 126, 534, 777, 1477
SduI GDGCHC 1 cut(s) 712
SfaNI GCATC 4 cut(s) 277, 558, 1168, 1171
SfcI CTRYAG 3 cut(s) 516, 543, 1020
SfuI TTCGAA 1 cut(s) 274
SinI GGWCC 1 cut(s) 122
SmlI CTYRAG 2 cut(s) 206, 1340
SmoI CTYRAG 2 cut(s) 206, 1340
SphI GCATGC 1 cut(s) 917
Sse9I AATT 4 cut(s) 258, 765, 864, 990
SsiI CCGC 3 cut(s) 905, 936, 995
SspMI CTAG 2 cut(s) 219, 1266
StyD4I CCNGG 4 cut(s) 124, 532, 775, 1475
StyI CCWWGG 2 cut(s) 218, 1058
TaiI ACGT 1 cut(s) 408
TaqI TCGA 4 cut(s) 236, 274, 318, 759
TasI AATT 4 cut(s) 258, 765, 864, 990
TatI WGTACW 3 cut(s) 610, 655, 1344
TauI GCSGC 1 cut(s) 938
TfiI GAWTC 2 cut(s) 253, 808
Tru1I TTAA 7 cut(s) 24, 297, 390, 696, 1014, 1035, 1341
Tru9I TTAA 7 cut(s) 24, 297, 390, 696, 1014, 1035, 1341
TscAI CASTG 6 cut(s) 44, 90, 853, 1049, 1089, 1107
TseI GCWGC 3 cut(s) 64, 290, 797
TspDTI ATGAA 7 cut(s) 68, 96, 173, 422, 488, 917, 1192
TspGWI ACGGA 1 cut(s) 1321
TspRI CASTG 6 cut(s) 44, 90, 853, 1049, 1089, 1107
Van91I CCANNNNNTGG 1 cut(s) 1295
Vha464I CTTAAG 1 cut(s) 1340
VpaK11BI GGWCC 1 cut(s) 122
XapI RAATTY 1 cut(s) 765
XceI RCATGY 2 cut(s) 874, 917
XmaJI CCTAGG 1 cut(s) 218
XspI CTAG 2 cut(s) 219, 1266
ZrmI AGTACT 1 cut(s) 657
Zsp2I ATGCAT 1 cut(s) 430
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.