RchiOBHm_Chr7g0241131

Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
67115336 .. 67120265
4930 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21612

Sequence Viewer

Length: 1476 bp
ATGGACAGTCAGGTTCTGTGTTTTAATCGCAACCACTGTTTTGTCAAAACGGTGCCGCAGCAGCAGCAGCGTCTCCAATTTCACACGCTACTTGCTGCTCACAAAACTTCATCTCTTTCTTTTCGACAAGGGTTTGCTTGCAAGGGGGCAAGTTGCTCGATGAAGTCTTACAGGCTATCTGAACTTACGCCCGCTGAGGTTCAGAACCTCAAGGCTCGTCCTAGGATTGACTTCTCTTCAATTTTCAGCACGGTCAACCCAATTGTAGATGATATTCGCAAAAGAGGTGATGCTGCTGTTAAGGACTATACTGCAAAGTTTGACAAAGTTGAACTGGATAAGATAGTTGTAGAAGTATCTGAGCTTCTAGATCCAGAGCTTGATCCTTCTATTAAAGAAGCATTTGACGTGGCATATGACAATATATATGCATTTCATTTTGCCCAGAAGTCAGCAGAGAAAACTGTTGAGAATATGAAGGGTGTCAAATGTAAACGAGTGGCAAGAAGTATTGGTTCTGTAGGTCTTTATGTTCCAGGAGGAACTGCAGTTTTACCTTCTACCGCTCTGATGCTTGCAGTTCCTGCTCAGATTGCTGGATCTAAAACCGTTGTACTTGCGACTCCCCCAAGTCGGGATGGCAGTATATGCAAGGAAGTACTCTACTGTGCTAAGAAGGCTGGTGTAACTCACATCCTTAAAGCTGGTGGTGCTCAGGCGATATCTGCTATGGCTTGGGGTACAGAATCTTGCCCAAAGGTCGAAAAAATTTTTGGCCCTGGAAATCAGTATGTCACGGCAGCGAAAATGATTCTCCAAAATAGTGAAGCCATGATCTCAATTGACATGCCAGCAGGCCCTTCCGAAGTTTTGGTCATTGCGGACAAGCATGCCAGTCCTGTTCATGTAGCTGCAGATTTACTTTCTCAGGCTGAGCATGGCCCTGATAGTCAAGTTGTTCTTGTAATTTCCGGGGATGGTGTTGATATTAAAGCTATAGAAGAGGAAGTTAAGAAGCAGTGCGACAGCCTACCAAGGGGAGATTTTGCCTCAAAAGCACTGAGCCATAGTTTCACAGTGTTTGCTCGTGATATGGTTGAGGCTGTGTCCTTTTCAAACTTATATGCACCTGAGCATCTGATCATCAATGTCAATGACGCAGAAAAGTGGGAGAGTTTCATTGAGAATGCAGGTTCTGTGTTTTTAGGGCCGTGGACTCCAGAGAGTGTTGGAGATTATGCGAGTGGAACAAACCATGTCCTTCCAACATATGGCTATGCACGGATGTATGGTGGTGTGTCTTTAGACTCCTTCCTTAAGTACATGACTGTGCAGTCTCTAACAGAGGAAGGTCTGCAAAAGCTTGGCCCTTATGTAGCCACGATGGCTGAAGTTGAGGGATTAGAGGCCCACAAGAGAGCCGTAACCCTTAGACTTAAAGATATTGAAGCCAGGCGGGTTCCAAATAGCAGGTGA

Protein Analysis

491

Amino Acids

53.34

Weight (kDa)

6.48

Isoelectric Point (pI)

43.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Histidinol_dh PF00815 73 - 479 5.2e-158 Histidinol dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1461
AasI GACNNNNNNGTC 1 cut(s) 1333
Acc36I ACCTGC 2 cut(s) 1181, 1461
AccB1I GGYRCC 1 cut(s) 52
AccB7I CCANNNNNTGG 1 cut(s) 1271
AccBSI CCGCTC 1 cut(s) 566
AciI CCGC 5 cut(s) 56, 192, 564, 881, 1456
AclWI GGATC 3 cut(s) 365, 377, 607
AcsI RAATTY 1 cut(s) 768
AcuI CTGAAG 1 cut(s) 1410
AfaI GTAC 4 cut(s) 615, 660, 742, 1322
AfiI CCNNNNNNNGG 4 cut(s) 633, 634, 1036, 1271
AflII CTTAAG 1 cut(s) 1316
AgsI TTSAA 4 cut(s) 240, 332, 1116, 1448
AjiI CACGTC 1 cut(s) 409
AjnI CCWGG 3 cut(s) 535, 778, 1451
AjuI GAANNNNNNNTTGG 2 cut(s) 756, 788
AluBI AGCT 6 cut(s) 364, 379, 704, 911, 995, 1363
AluI AGCT 6 cut(s) 364, 379, 704, 911, 995, 1363
Alw21I GWGCWC 1 cut(s) 715
Alw26I GTCTC 2 cut(s) 77, 1341
AlwI GGATC 3 cut(s) 365, 377, 607
AlwNI CAGNNNCTG 3 cut(s) 16, 584, 1196
AoxI GGCC 6 cut(s) 775, 856, 940, 1208, 1366, 1407
ApeKI GCWGC 8 cut(s) 58, 61, 64, 67, 95, 293, 800, 911
ApoI RAATTY 1 cut(s) 768
ArsI GACNNNNNNTTYG 2 cut(s) 858, 890
AspA2I CCTAGG 1 cut(s) 221
AspS9I GGNCC 6 cut(s) 776, 857, 941, 1208, 1367, 1408
AsuC2I CCSGG 1 cut(s) 973
AsuHPI GGTGA 1 cut(s) 299
AvrII CCTAGG 1 cut(s) 221
BanI GGYRCC 1 cut(s) 52
BarI GAAGNNNNNNTAC 2 cut(s) 348, 380
BauI CACGAG 1 cut(s) 1086
Bbv12I GWGCWC 1 cut(s) 715
BbvCI CCTCAGC 1 cut(s) 195
BbvI GCAGC 8 cut(s) 70, 73, 76, 79, 82, 280, 812, 898
BccI CCATC 3 cut(s) 632, 971, 1378
BceAI ACGGC 3 cut(s) 813, 1195, 1406
BcgI CGANNNNNNTGC 2 cut(s) 138, 172
BciT130I CCWGG 3 cut(s) 537, 780, 1453
BclI TGATCA 1 cut(s) 1140
BcnI CCSGG 1 cut(s) 973
BcoDI GTCTC 2 cut(s) 77, 1341
BfaI CTAG 2 cut(s) 222, 368
BfmI CTRYAG 4 cut(s) 519, 546, 912, 996
BfrI CTTAAG 1 cut(s) 1316
BfuAI ACCTGC 2 cut(s) 1181, 1461
BglI GCCNNNNNGGC 1 cut(s) 1385
BisI GCNGC 9 cut(s) 56, 59, 62, 65, 68, 96, 294, 801, 912
BlnI CCTAGG 1 cut(s) 221
BlpI GCTNAGC 1 cut(s) 933
BlsI GCNGC 9 cut(s) 57, 60, 63, 66, 69, 97, 295, 802, 913
BmcAI AGTACT 1 cut(s) 660
Bme1390I CCNGG 4 cut(s) 537, 780, 973, 1453
BmgBI CACGTC 1 cut(s) 409
BmgT120I GGNCC 6 cut(s) 776, 857, 941, 1208, 1367, 1408
BmiI GGNNCC 2 cut(s) 54, 1461
BmrFI CCNGG 4 cut(s) 537, 780, 973, 1453
BmsI GCATC 3 cut(s) 280, 561, 1144
BpmI CTGGAG 1 cut(s) 1203
Bpu10I CCTNAGC 3 cut(s) 195, 714, 1131
Bpu1102I GCTNAGC 1 cut(s) 933
BpuEI CTTGAG 1 cut(s) 194
BpuMI CCSGG 1 cut(s) 973
BsaJI CCNNGG 5 cut(s) 221, 778, 972, 1034, 1211
Bsc4I CCNNNNNNNGG 4 cut(s) 633, 634, 1036, 1271
Bse1I ACTGG 2 cut(s) 339, 894
Bse3DI GCAATG 1 cut(s) 876
BseBI CCWGG 3 cut(s) 537, 780, 1453
BseDI CCNNGG 5 cut(s) 221, 778, 972, 1034, 1211
BseGI GGATG 4 cut(s) 643, 693, 982, 1290
BseLI CCNNNNNNNGG 4 cut(s) 633, 634, 1036, 1271
BseMI GCAATG 1 cut(s) 876
BseMII CTCAG 8 cut(s) 186, 351, 602, 728, 924, 941, 1052, 1122
BseNI ACTGG 2 cut(s) 339, 894
BseXI GCAGC 8 cut(s) 70, 73, 76, 79, 82, 280, 812, 898
BsgI GTGCAG 1 cut(s) 1352
BshFI GGCC 6 cut(s) 777, 858, 942, 1210, 1368, 1409
BshNI GGYRCC 1 cut(s) 52
BsiHKAI GWGCWC 1 cut(s) 715
BsiSI CCGG 1 cut(s) 972
BslI CCNNNNNNNGG 4 cut(s) 633, 634, 1036, 1271
BsmAI GTCTC 2 cut(s) 77, 1341
BsmBI CGTCTC 1 cut(s) 77
BsmI GAATGC 1 cut(s) 1192
BsnI GGCC 6 cut(s) 777, 858, 942, 1210, 1368, 1409
Bsp1286I GDGCHC 1 cut(s) 715
Bsp143I GATC 5 cut(s) 370, 382, 599, 834, 1140
Bsp1720I GCTNAGC 1 cut(s) 933
BspACI CCGC 5 cut(s) 56, 192, 564, 881, 1456
BspANI GGCC 6 cut(s) 777, 858, 942, 1210, 1368, 1409
BspCNI CTCAG 8 cut(s) 187, 352, 601, 727, 925, 940, 1053, 1123
BspLI GGNNCC 2 cut(s) 54, 1461
BspMAI CTGCAG 2 cut(s) 550, 916
BspMI ACCTGC 2 cut(s) 1181, 1461
BspPI GGATC 3 cut(s) 365, 377, 607
BspT107I GGYRCC 1 cut(s) 52
BspTI CTTAAG 1 cut(s) 1316
BsrBI CCGCTC 1 cut(s) 566
BsrDI GCAATG 1 cut(s) 876
BsrI ACTGG 2 cut(s) 339, 894
BssECI CCNNGG 5 cut(s) 221, 778, 972, 1034, 1211
BssMI GATC 5 cut(s) 370, 382, 599, 834, 1140
BssSI CACGAG 1 cut(s) 1086
BssT1I CCWWGG 2 cut(s) 221, 1034
Bst2BI CACGAG 1 cut(s) 1086
Bst2UI CCWGG 3 cut(s) 537, 780, 1453
Bst4CI ACNGT 9 cut(s) 8, 38, 52, 253, 466, 610, 668, 1078, 1330
Bst6I CTCTTC 2 cut(s) 241, 996
BstAFI CTTAAG 1 cut(s) 1316
BstAPI GCANNNNNTGC 2 cut(s) 584, 648
BstC8I GCNNGC 6 cut(s) 139, 192, 576, 852, 856, 891
BstDSI CCRYGG 1 cut(s) 1211
BstF5I GGATG 4 cut(s) 643, 693, 982, 1290
BstKTI GATC 5 cut(s) 373, 385, 602, 837, 1143
BstMAI GTCTC 2 cut(s) 77, 1341
BstMBI GATC 5 cut(s) 370, 382, 599, 834, 1140
BstNI CCWGG 3 cut(s) 537, 780, 1453
BstNSI RCATGY 2 cut(s) 850, 893
BstSCI CCNGG 4 cut(s) 535, 778, 971, 1451
BstSFI CTRYAG 4 cut(s) 519, 546, 912, 996
BstV1I GCAGC 8 cut(s) 70, 73, 76, 79, 82, 280, 812, 898
BstX2I RGATCY 2 cut(s) 370, 599
BstYI RGATCY 2 cut(s) 370, 599
BsuRI GGCC 6 cut(s) 777, 858, 942, 1210, 1368, 1409
BtgI CCRYGG 1 cut(s) 1211
BtrI CACGTC 1 cut(s) 409
BtsCI GGATG 4 cut(s) 643, 693, 982, 1290
BtsI GCAGTG 1 cut(s) 1025
BtsIMutI CAGTG 4 cut(s) 34, 1025, 1058, 1083
BveI ACCTGC 2 cut(s) 1181, 1461
Cac8I GCNNGC 6 cut(s) 139, 192, 576, 852, 856, 891
CaiI CAGNNNCTG 3 cut(s) 16, 584, 1196
Cfr13I GGNCC 6 cut(s) 776, 857, 941, 1208, 1367, 1408
CseI GACGC 2 cut(s) 59, 1166
Csp6I GTAC 4 cut(s) 614, 659, 741, 1321
CviAII CATG 7 cut(s) 832, 847, 890, 905, 938, 1256, 1324
CviQI GTAC 4 cut(s) 614, 659, 741, 1321
DpnI GATC 5 cut(s) 372, 384, 601, 836, 1142
DpnII GATC 5 cut(s) 370, 382, 599, 834, 1140
DrdI GACNNNNNNGTC 1 cut(s) 1333
DseDI GACNNNNNNGTC 1 cut(s) 1333
Eam1104I CTCTTC 2 cut(s) 241, 996
EarI CTCTTC 2 cut(s) 241, 996
Eco130I CCWWGG 2 cut(s) 221, 1034
Eco32I GATATC 1 cut(s) 723
Eco57I CTGAAG 1 cut(s) 1410
EcoO109I RGGNCCY 1 cut(s) 857
EcoRII CCWGG 3 cut(s) 535, 778, 1451
EcoRV GATATC 1 cut(s) 723
EcoT14I CCWWGG 2 cut(s) 221, 1034
EcoT22I ATGCAT 1 cut(s) 433
ErhI CCWWGG 2 cut(s) 221, 1034
Esp3I CGTCTC 1 cut(s) 77
FaeI CATG 7 cut(s) 835, 850, 893, 908, 941, 1259, 1327
FalI AAGNNNNNCTT 2 cut(s) 945, 977
FatI CATG 7 cut(s) 831, 846, 889, 904, 937, 1255, 1323
FauI CCCGC 2 cut(s) 199, 1449
FauNDI CATATG 2 cut(s) 415, 1270
FbaI TGATCA 1 cut(s) 1140
Fnu4HI GCNGC 9 cut(s) 56, 59, 62, 65, 68, 96, 294, 801, 912
FokI GGATG 4 cut(s) 650, 680, 989, 1297
Fsp4HI GCNGC 9 cut(s) 56, 59, 62, 65, 68, 96, 294, 801, 912
FspBI CTAG 2 cut(s) 222, 368
GluI GCNGC 9 cut(s) 56, 59, 62, 65, 68, 96, 294, 801, 912
GsuI CTGGAG 1 cut(s) 1203
HaeIII GGCC 6 cut(s) 777, 858, 942, 1210, 1368, 1409
HapII CCGG 1 cut(s) 972
HgaI GACGC 2 cut(s) 59, 1166
Hin1II CATG 7 cut(s) 835, 850, 893, 908, 941, 1259, 1327
HincII GTYRAC 1 cut(s) 256
HindII GTYRAC 1 cut(s) 256
HindIII AAGCTT 1 cut(s) 1361
HinfI GANTC 5 cut(s) 622, 746, 811, 1216, 1307
HpaII CCGG 1 cut(s) 972
HphI GGTGA 1 cut(s) 299
Hpy166II GTNNAC 3 cut(s) 256, 494, 1215
Hpy188I TCNGA 7 cut(s) 181, 204, 361, 570, 591, 865, 1140
Hpy188III TCNNGA 5 cut(s) 368, 374, 635, 1088, 1220
Hpy8I GTNNAC 3 cut(s) 256, 494, 1215
HpyAV CCTTC 8 cut(s) 396, 472, 567, 670, 870, 1271, 1321, 1343
HpyCH4III ACNGT 9 cut(s) 8, 38, 52, 253, 466, 610, 668, 1078, 1330
HpyCH4IV ACGT 1 cut(s) 408
HpySE526I ACGT 1 cut(s) 408
Hsp92II CATG 7 cut(s) 835, 850, 893, 908, 941, 1259, 1327
Ksp22I TGATCA 1 cut(s) 1140
Kzo9I GATC 5 cut(s) 370, 382, 599, 834, 1140
Lsp1109I GCAGC 8 cut(s) 70, 73, 76, 79, 82, 280, 812, 898
LweI GCATC 3 cut(s) 280, 561, 1144
MaeI CTAG 2 cut(s) 222, 368
MaeII ACGT 1 cut(s) 408
MaeIII GTNAC 3 cut(s) 685, 793, 1423
MalI GATC 5 cut(s) 372, 384, 601, 836, 1142
MbiI CCGCTC 1 cut(s) 566
MboI GATC 5 cut(s) 370, 382, 599, 834, 1140
MboII GAAGA 2 cut(s) 228, 1013
MfeI CAATTG 2 cut(s) 261, 840
MflI RGATCY 2 cut(s) 370, 599
MhlI GDGCHC 1 cut(s) 715
MluCI AATT 6 cut(s) 77, 240, 261, 768, 840, 966
MlyI GAGTC 3 cut(s) 616, 1210, 1301
MmeI TCCRAC 2 cut(s) 1210, 1289
Mph1103I ATGCAT 1 cut(s) 433
MseI TTAA 8 cut(s) 24, 300, 393, 699, 990, 1011, 1317, 1437
MslI CAYNNNNRTG 1 cut(s) 1328
MspA1I CMGCKG 1 cut(s) 194
MspCI CTTAAG 1 cut(s) 1316
MspI CCGG 1 cut(s) 972
MspR9I CCNGG 4 cut(s) 537, 780, 973, 1453
MunI CAATTG 2 cut(s) 261, 840
Mva1269I GAATGC 1 cut(s) 1192
MvaI CCWGG 3 cut(s) 537, 780, 1453
NciI CCSGG 1 cut(s) 973
NdeI CATATG 2 cut(s) 415, 1270
NdeII GATC 5 cut(s) 370, 382, 599, 834, 1140
NlaIII CATG 7 cut(s) 835, 850, 893, 908, 941, 1259, 1327
NlaIV GGNNCC 2 cut(s) 54, 1461
NmuCI GTSAC 1 cut(s) 793
NsiI ATGCAT 1 cut(s) 433
NspI RCATGY 2 cut(s) 850, 893
PaeI GCATGC 1 cut(s) 893
PaqCI CACCTGC 1 cut(s) 1461
PctI GAATGC 1 cut(s) 1192
PfeI GAWTC 2 cut(s) 746, 811
PflMI CCANNNNNTGG 1 cut(s) 1271
PfoI TCCNGGA 1 cut(s) 535
PkrI GCNGC 9 cut(s) 57, 60, 63, 66, 69, 97, 295, 802, 913
PleI GAGTC 3 cut(s) 616, 1210, 1301
PpsI GAGTC 3 cut(s) 616, 1210, 1301
Psp6I CCWGG 3 cut(s) 535, 778, 1451
PspGI CCWGG 3 cut(s) 535, 778, 1451
PspN4I GGNNCC 2 cut(s) 54, 1461
PspPI GGNCC 6 cut(s) 776, 857, 941, 1208, 1367, 1408
PstI CTGCAG 2 cut(s) 550, 916
PstNI CAGNNNCTG 3 cut(s) 16, 584, 1196
PsuI RGATCY 2 cut(s) 370, 599
RsaI GTAC 4 cut(s) 615, 660, 742, 1322
RsaNI GTAC 4 cut(s) 614, 659, 741, 1321
RseI CAYNNNNRTG 1 cut(s) 1328
SaqAI TTAA 8 cut(s) 24, 300, 393, 699, 990, 1011, 1317, 1437
SatI GCNGC 9 cut(s) 56, 59, 62, 65, 68, 96, 294, 801, 912
Sau3AI GATC 5 cut(s) 370, 382, 599, 834, 1140
Sau96I GGNCC 6 cut(s) 776, 857, 941, 1208, 1367, 1408
ScaI AGTACT 1 cut(s) 660
SchI GAGTC 3 cut(s) 616, 1210, 1301
ScrFI CCNGG 4 cut(s) 537, 780, 973, 1453
SduI GDGCHC 1 cut(s) 715
SfaNI GCATC 3 cut(s) 280, 561, 1144
SfcI CTRYAG 4 cut(s) 519, 546, 912, 996
SmiMI CAYNNNNRTG 1 cut(s) 1328
SmlI CTYRAG 2 cut(s) 209, 1316
SmoI CTYRAG 2 cut(s) 209, 1316
SphI GCATGC 1 cut(s) 893
Sse9I AATT 6 cut(s) 77, 240, 261, 768, 840, 966
SsiI CCGC 5 cut(s) 56, 192, 564, 881, 1456
SspMI CTAG 2 cut(s) 222, 368
StyD4I CCNGG 4 cut(s) 535, 778, 971, 1451
StyI CCWWGG 2 cut(s) 221, 1034
TaaI ACNGT 9 cut(s) 8, 38, 52, 253, 466, 610, 668, 1078, 1330
TaiI ACGT 1 cut(s) 411
TaqI TCGA 3 cut(s) 124, 158, 762
TasI AATT 6 cut(s) 77, 240, 261, 768, 840, 966
TatI WGTACW 3 cut(s) 613, 658, 1320
TauI GCSGC 1 cut(s) 58
TfiI GAWTC 2 cut(s) 746, 811
Tru1I TTAA 8 cut(s) 24, 300, 393, 699, 990, 1011, 1317, 1437
Tru9I TTAA 8 cut(s) 24, 300, 393, 699, 990, 1011, 1317, 1437
TscAI CASTG 4 cut(s) 41, 1025, 1065, 1083
TseFI GTSAC 1 cut(s) 793
TseI GCWGC 8 cut(s) 58, 61, 64, 67, 95, 293, 800, 911
Tsp45I GTSAC 1 cut(s) 793
TspDTI ATGAA 6 cut(s) 99, 176, 425, 491, 893, 1168
TspGWI ACGGA 1 cut(s) 1297
TspRI CASTG 4 cut(s) 41, 1025, 1065, 1083
Van91I CCANNNNNTGG 1 cut(s) 1271
Vha464I CTTAAG 1 cut(s) 1316
XapI RAATTY 1 cut(s) 768
XbaI TCTAGA 1 cut(s) 367
XceI RCATGY 2 cut(s) 850, 893
XmaJI CCTAGG 1 cut(s) 221
XspI CTAG 2 cut(s) 222, 368
ZrmI AGTACT 1 cut(s) 660
Zsp2I ATGCAT 1 cut(s) 433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.