Rw7G042000

Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
65632770 .. 65637104
4335 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G042000.1

Sequence Viewer

Length: 1458 bp
ATGGACAGTCAGGTTCTTTGTTTTAATCGCAACCACTGTTTTGTCAAAACGGTGCCGCAGCAGCAGCAGCAGCGTCTCCAATTTCACACGCTACTTGCTGCTCACAAAAGCTTCATCTCTTTCTTTTCGACGAGTTGCTCGATGAAGTCTTACAGGCTATCTGAACTTACGCCCGCTGAGGTTCAGAACCTCAAGGCTCGTCCTAGGATTGACTTCTCTTCAATTTTCAGCACGGTCAACCCAATTGTAGATGATATTCGCAAAAGAGGTGATGCTGCTGTTAAGGACTATACCGCAAAGTTTGACAAAGTTGAACTGGATAAGATAGTTGTAGAAGTATCTGAGCTTCTAGATCCAGAGCTTGATCCTTCTATTAAAGAAGCATTTGACGTGGCATATGACAATATATATGCATTTCATTTTGCCCAGAAGTCAGCAGAGAAAACTGTTGAGAATATGAAGGGTGTCAAATGTAAACGAGTGGCAAGAAGTATTGGTTCTGTAGGTCTTTATGTTCCAGGAGGAACTGCAGTTTTACCTTCTACTGCTCTGATGCTTGCAGTTCCTGCTCAGATTGCTGGATCTAAAACCGTTGTACTTGCGACTCCCCCAAGTCGGGATGGCAGTATATGCAAGGAAGTACTCTACTGTGCTAAGAAGGCTGGTGTAACTCACATCCTTAAAGCTGGTGGTGCTCAGGCGATATCTGCTATGGCTTGGGGTACAGAATCTTGCCCAAAGGTCGAAAAAATTTTTGGCCCTGGAAATCAGTATGTCACGGCAGCGAAAATGATTCTCCAAAATAGTGAAGCCATGATCTCAATTGACATGCCAGCAGGCCCTTCCGAAGTTTTGGTCATTGCGGACAAGCATGCCAGTCCTGTTCATGTAGCTGCAGATTTACTTTCTCAGGCTGAGCATGGCCCTGATAGTCAAGTTGTTCTTGTAATTTCTGGGGATGGTGTTGATATTAAAGCTATAGAAGAGGAAGTTAAGAAGCAGTGCGACAGCCTACCAAGGGGAGATTTTGCCTCAAAAGCACTGAGCCATAGTTTCACAGTGTTTGCTCGTGATATGGTTGAGGCTGTGTCCTTTTCAAACTTATATGCACCTGAGCATCTGATCATCAATGTCAATGACGCAGAAAAGTGGGAGAGTTTCATTGAGAATGCAGGTTCTGTGTTTTTAGGGCCGTGGACTCCAGAGAGTGTTGGAGATTATGCGAGTGGAACAAACCATGTCCTTCCAACATATGGCTATGCGCGGATGTATGGTGGTGTGTCTTTAGACTCCTTCCTTAAGTACATGACTGTGCAGTCTCTAACAGAGGAAGGTCTGCAAAAGCTTGGCCCCTATGTAGCCACGATGGCTGAAGTTGAGGGATTAGAGGCCCACAAGAGAGCCGTAACCCTTAGACTTAAAGATATTGAAGCCAGGCAGGTTCCAAATAGCAGGTGA

Protein Analysis

485

Amino Acids

52.81

Weight (kDa)

6.09

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Histidinol_dh PF00815 67 - 473 5e-158 Histidinol dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1443
AasI GACNNNNNNGTC 1 cut(s) 1315
Acc36I ACCTGC 3 cut(s) 1163, 1429, 1443
AccB1I GGYRCC 1 cut(s) 52
AccB7I CCANNNNNTGG 1 cut(s) 1253
AccII CGCG 1 cut(s) 1264
AciI CCGC 5 cut(s) 56, 174, 294, 863, 1264
AclWI GGATC 3 cut(s) 347, 359, 589
AcsI RAATTY 1 cut(s) 750
AcuI CTGAAG 1 cut(s) 1392
AfaI GTAC 4 cut(s) 597, 642, 724, 1304
AfiI CCNNNNNNNGG 4 cut(s) 615, 616, 1018, 1253
AflII CTTAAG 1 cut(s) 1298
AgsI TTSAA 4 cut(s) 222, 314, 1098, 1430
AjiI CACGTC 1 cut(s) 391
AjnI CCWGG 3 cut(s) 517, 760, 1433
AjuI GAANNNNNNNTTGG 2 cut(s) 738, 770
AluBI AGCT 7 cut(s) 111, 346, 361, 686, 893, 977, 1345
AluI AGCT 7 cut(s) 111, 346, 361, 686, 893, 977, 1345
Alw21I GWGCWC 1 cut(s) 697
Alw26I GTCTC 2 cut(s) 80, 1323
AlwI GGATC 3 cut(s) 347, 359, 589
AlwNI CAGNNNCTG 2 cut(s) 566, 1178
AoxI GGCC 6 cut(s) 757, 838, 922, 1190, 1348, 1389
ApeKI GCWGC 9 cut(s) 58, 61, 64, 67, 70, 98, 275, 782, 893
ApoI RAATTY 1 cut(s) 750
ArsI GACNNNNNNTTYG 2 cut(s) 840, 872
AspA2I CCTAGG 1 cut(s) 203
AspLEI GCGC 1 cut(s) 1264
AspS9I GGNCC 6 cut(s) 758, 839, 923, 1190, 1349, 1390
AsuHPI GGTGA 1 cut(s) 281
AvrII CCTAGG 1 cut(s) 203
BanI GGYRCC 1 cut(s) 52
BarI GAAGNNNNNNTAC 2 cut(s) 330, 362
BauI CACGAG 1 cut(s) 1068
Bbv12I GWGCWC 1 cut(s) 697
BbvCI CCTCAGC 1 cut(s) 177
BbvI GCAGC 9 cut(s) 70, 73, 76, 79, 82, 85, 262, 794, 880
BccI CCATC 3 cut(s) 614, 953, 1360
BceAI ACGGC 3 cut(s) 795, 1177, 1388
BciT130I CCWGG 3 cut(s) 519, 762, 1435
BclI TGATCA 1 cut(s) 1122
BcoDI GTCTC 2 cut(s) 80, 1323
BfaI CTAG 2 cut(s) 204, 350
BfmI CTRYAG 4 cut(s) 501, 528, 894, 978
BfrI CTTAAG 1 cut(s) 1298
BfuAI ACCTGC 3 cut(s) 1163, 1429, 1443
BglI GCCNNNNNGGC 1 cut(s) 1367
BlnI CCTAGG 1 cut(s) 203
BlpI GCTNAGC 1 cut(s) 915
BmcAI AGTACT 1 cut(s) 642
Bme1390I CCNGG 3 cut(s) 519, 762, 1435
BmgBI CACGTC 1 cut(s) 391
BmgT120I GGNCC 6 cut(s) 758, 839, 923, 1190, 1349, 1390
BmiI GGNNCC 3 cut(s) 54, 1351, 1443
BmrFI CCNGG 3 cut(s) 519, 762, 1435
BmsI GCATC 3 cut(s) 262, 543, 1126
BpmI CTGGAG 1 cut(s) 1185
Bpu10I CCTNAGC 3 cut(s) 177, 696, 1113
Bpu1102I GCTNAGC 1 cut(s) 915
BpuEI CTTGAG 1 cut(s) 176
BsaJI CCNNGG 4 cut(s) 203, 760, 1016, 1193
Bsc4I CCNNNNNNNGG 4 cut(s) 615, 616, 1018, 1253
Bse1I ACTGG 2 cut(s) 321, 876
Bse3DI GCAATG 1 cut(s) 858
BseBI CCWGG 3 cut(s) 519, 762, 1435
BseDI CCNNGG 4 cut(s) 203, 760, 1016, 1193
BseGI GGATG 4 cut(s) 625, 675, 964, 1272
BseLI CCNNNNNNNGG 4 cut(s) 615, 616, 1018, 1253
BseMI GCAATG 1 cut(s) 858
BseMII CTCAG 8 cut(s) 168, 333, 584, 710, 906, 923, 1034, 1104
BseNI ACTGG 2 cut(s) 321, 876
BseXI GCAGC 9 cut(s) 70, 73, 76, 79, 82, 85, 262, 794, 880
BsgI GTGCAG 1 cut(s) 1334
Bsh1236I CGCG 1 cut(s) 1264
BshFI GGCC 6 cut(s) 759, 840, 924, 1192, 1350, 1391
BshNI GGYRCC 1 cut(s) 52
BsiHKAI GWGCWC 1 cut(s) 697
BslI CCNNNNNNNGG 4 cut(s) 615, 616, 1018, 1253
BsmAI GTCTC 2 cut(s) 80, 1323
BsmBI CGTCTC 1 cut(s) 80
BsmI GAATGC 1 cut(s) 1174
BsnI GGCC 6 cut(s) 759, 840, 924, 1192, 1350, 1391
Bsp1286I GDGCHC 1 cut(s) 697
Bsp143I GATC 5 cut(s) 352, 364, 581, 816, 1122
Bsp1720I GCTNAGC 1 cut(s) 915
BspACI CCGC 5 cut(s) 56, 174, 294, 863, 1264
BspANI GGCC 6 cut(s) 759, 840, 924, 1192, 1350, 1391
BspCNI CTCAG 8 cut(s) 169, 334, 583, 709, 907, 922, 1035, 1105
BspFNI CGCG 1 cut(s) 1264
BspLI GGNNCC 3 cut(s) 54, 1351, 1443
BspMAI CTGCAG 2 cut(s) 532, 898
BspMI ACCTGC 3 cut(s) 1163, 1429, 1443
BspPI GGATC 3 cut(s) 347, 359, 589
BspT107I GGYRCC 1 cut(s) 52
BspTI CTTAAG 1 cut(s) 1298
BsrDI GCAATG 1 cut(s) 858
BsrI ACTGG 2 cut(s) 321, 876
BssECI CCNNGG 4 cut(s) 203, 760, 1016, 1193
BssMI GATC 5 cut(s) 352, 364, 581, 816, 1122
BssSI CACGAG 1 cut(s) 1068
BssT1I CCWWGG 2 cut(s) 203, 1016
Bst2BI CACGAG 1 cut(s) 1068
Bst2UI CCWGG 3 cut(s) 519, 762, 1435
Bst4CI ACNGT 9 cut(s) 8, 38, 52, 235, 448, 592, 650, 1060, 1312
Bst6I CTCTTC 2 cut(s) 223, 978
BstAFI CTTAAG 1 cut(s) 1298
BstAPI GCANNNNNTGC 2 cut(s) 566, 630
BstC8I GCNNGC 5 cut(s) 174, 558, 834, 838, 873
BstDSI CCRYGG 1 cut(s) 1193
BstF5I GGATG 4 cut(s) 625, 675, 964, 1272
BstFNI CGCG 1 cut(s) 1264
BstHHI GCGC 1 cut(s) 1264
BstKTI GATC 5 cut(s) 355, 367, 584, 819, 1125
BstMAI GTCTC 2 cut(s) 80, 1323
BstMBI GATC 5 cut(s) 352, 364, 581, 816, 1122
BstNI CCWGG 3 cut(s) 519, 762, 1435
BstNSI RCATGY 2 cut(s) 832, 875
BstSCI CCNGG 3 cut(s) 517, 760, 1433
BstSFI CTRYAG 4 cut(s) 501, 528, 894, 978
BstUI CGCG 1 cut(s) 1264
BstV1I GCAGC 9 cut(s) 70, 73, 76, 79, 82, 85, 262, 794, 880
BstX2I RGATCY 2 cut(s) 352, 581
BstYI RGATCY 2 cut(s) 352, 581
BsuRI GGCC 6 cut(s) 759, 840, 924, 1192, 1350, 1391
BtgI CCRYGG 1 cut(s) 1193
BtrI CACGTC 1 cut(s) 391
BtsCI GGATG 4 cut(s) 625, 675, 964, 1272
BtsI GCAGTG 1 cut(s) 1007
BtsIMutI CAGTG 4 cut(s) 34, 1007, 1040, 1065
BveI ACCTGC 3 cut(s) 1163, 1429, 1443
Cac8I GCNNGC 5 cut(s) 174, 558, 834, 838, 873
CaiI CAGNNNCTG 2 cut(s) 566, 1178
CfoI GCGC 1 cut(s) 1264
Cfr13I GGNCC 6 cut(s) 758, 839, 923, 1190, 1349, 1390
CseI GACGC 2 cut(s) 62, 1148
Csp6I GTAC 4 cut(s) 596, 641, 723, 1303
CviAII CATG 7 cut(s) 814, 829, 872, 887, 920, 1238, 1306
CviQI GTAC 4 cut(s) 596, 641, 723, 1303
DpnI GATC 5 cut(s) 354, 366, 583, 818, 1124
DpnII GATC 5 cut(s) 352, 364, 581, 816, 1122
DrdI GACNNNNNNGTC 1 cut(s) 1315
DseDI GACNNNNNNGTC 1 cut(s) 1315
Eam1104I CTCTTC 2 cut(s) 223, 978
EarI CTCTTC 2 cut(s) 223, 978
Eco130I CCWWGG 2 cut(s) 203, 1016
Eco32I GATATC 1 cut(s) 705
Eco57I CTGAAG 1 cut(s) 1392
EcoO109I RGGNCCY 1 cut(s) 839
EcoRII CCWGG 3 cut(s) 517, 760, 1433
EcoRV GATATC 1 cut(s) 705
EcoT14I CCWWGG 2 cut(s) 203, 1016
EcoT22I ATGCAT 1 cut(s) 415
ErhI CCWWGG 2 cut(s) 203, 1016
Esp3I CGTCTC 1 cut(s) 80
FaeI CATG 7 cut(s) 817, 832, 875, 890, 923, 1241, 1309
FalI AAGNNNNNCTT 2 cut(s) 927, 959
FatI CATG 7 cut(s) 813, 828, 871, 886, 919, 1237, 1305
FauI CCCGC 1 cut(s) 181
FauNDI CATATG 2 cut(s) 397, 1252
FbaI TGATCA 1 cut(s) 1122
FokI GGATG 4 cut(s) 632, 662, 971, 1279
FspBI CTAG 2 cut(s) 204, 350
GlaI GCGC 1 cut(s) 1263
GsuI CTGGAG 1 cut(s) 1185
HaeIII GGCC 6 cut(s) 759, 840, 924, 1192, 1350, 1391
HgaI GACGC 2 cut(s) 62, 1148
HhaI GCGC 1 cut(s) 1264
Hin1II CATG 7 cut(s) 817, 832, 875, 890, 923, 1241, 1309
Hin6I GCGC 1 cut(s) 1262
HinP1I GCGC 1 cut(s) 1262
HincII GTYRAC 1 cut(s) 238
HindII GTYRAC 1 cut(s) 238
HindIII AAGCTT 2 cut(s) 109, 1343
HinfI GANTC 5 cut(s) 604, 728, 793, 1198, 1289
HphI GGTGA 1 cut(s) 281
Hpy166II GTNNAC 3 cut(s) 238, 476, 1197
Hpy188I TCNGA 7 cut(s) 163, 186, 343, 552, 573, 847, 1122
Hpy188III TCNNGA 5 cut(s) 350, 356, 617, 1070, 1202
Hpy8I GTNNAC 3 cut(s) 238, 476, 1197
Hpy99I CGWCG 1 cut(s) 133
HpyAV CCTTC 8 cut(s) 378, 454, 549, 652, 852, 1253, 1303, 1325
HpyCH4III ACNGT 9 cut(s) 8, 38, 52, 235, 448, 592, 650, 1060, 1312
HpyCH4IV ACGT 1 cut(s) 390
HpyCH4V TGCA 9 cut(s) 413, 530, 560, 633, 896, 1109, 1172, 1315, 1339
HpySE526I ACGT 1 cut(s) 390
Hsp92II CATG 7 cut(s) 817, 832, 875, 890, 923, 1241, 1309
HspAI GCGC 1 cut(s) 1262
Ksp22I TGATCA 1 cut(s) 1122
Kzo9I GATC 5 cut(s) 352, 364, 581, 816, 1122
Lsp1109I GCAGC 9 cut(s) 70, 73, 76, 79, 82, 85, 262, 794, 880
LweI GCATC 3 cut(s) 262, 543, 1126
MaeI CTAG 2 cut(s) 204, 350
MaeII ACGT 1 cut(s) 390
MaeIII GTNAC 3 cut(s) 667, 775, 1405
MalI GATC 5 cut(s) 354, 366, 583, 818, 1124
MboI GATC 5 cut(s) 352, 364, 581, 816, 1122
MboII GAAGA 2 cut(s) 210, 995
MfeI CAATTG 2 cut(s) 243, 822
MflI RGATCY 2 cut(s) 352, 581
MhlI GDGCHC 1 cut(s) 697
MluCI AATT 6 cut(s) 80, 222, 243, 750, 822, 948
MlyI GAGTC 3 cut(s) 598, 1192, 1283
MmeI TCCRAC 2 cut(s) 1192, 1271
Mph1103I ATGCAT 1 cut(s) 415
MseI TTAA 8 cut(s) 24, 282, 375, 681, 972, 993, 1299, 1419
MslI CAYNNNNRTG 1 cut(s) 1310
MspA1I CMGCKG 1 cut(s) 176
MspCI CTTAAG 1 cut(s) 1298
MspR9I CCNGG 3 cut(s) 519, 762, 1435
MunI CAATTG 2 cut(s) 243, 822
Mva1269I GAATGC 1 cut(s) 1174
MvaI CCWGG 3 cut(s) 519, 762, 1435
MvnI CGCG 1 cut(s) 1264
NdeI CATATG 2 cut(s) 397, 1252
NdeII GATC 5 cut(s) 352, 364, 581, 816, 1122
NlaIII CATG 7 cut(s) 817, 832, 875, 890, 923, 1241, 1309
NlaIV GGNNCC 3 cut(s) 54, 1351, 1443
NmuCI GTSAC 1 cut(s) 775
NsiI ATGCAT 1 cut(s) 415
NspI RCATGY 2 cut(s) 832, 875
PaeI GCATGC 1 cut(s) 875
PaqCI CACCTGC 1 cut(s) 1443
PcsI WCGNNNNNNNCGW 1 cut(s) 137
PctI GAATGC 1 cut(s) 1174
PfeI GAWTC 2 cut(s) 728, 793
PflMI CCANNNNNTGG 1 cut(s) 1253
PfoI TCCNGGA 1 cut(s) 517
PleI GAGTC 3 cut(s) 598, 1192, 1283
PpsI GAGTC 3 cut(s) 598, 1192, 1283
Psp6I CCWGG 3 cut(s) 517, 760, 1433
PspGI CCWGG 3 cut(s) 517, 760, 1433
PspN4I GGNNCC 3 cut(s) 54, 1351, 1443
PspPI GGNCC 6 cut(s) 758, 839, 923, 1190, 1349, 1390
PstI CTGCAG 2 cut(s) 532, 898
PstNI CAGNNNCTG 2 cut(s) 566, 1178
PsuI RGATCY 2 cut(s) 352, 581
RsaI GTAC 4 cut(s) 597, 642, 724, 1304
RsaNI GTAC 4 cut(s) 596, 641, 723, 1303
RseI CAYNNNNRTG 1 cut(s) 1310
SaqAI TTAA 8 cut(s) 24, 282, 375, 681, 972, 993, 1299, 1419
Sau3AI GATC 5 cut(s) 352, 364, 581, 816, 1122
Sau96I GGNCC 6 cut(s) 758, 839, 923, 1190, 1349, 1390
ScaI AGTACT 1 cut(s) 642
SchI GAGTC 3 cut(s) 598, 1192, 1283
ScrFI CCNGG 3 cut(s) 519, 762, 1435
SduI GDGCHC 1 cut(s) 697
SfaNI GCATC 3 cut(s) 262, 543, 1126
SfcI CTRYAG 4 cut(s) 501, 528, 894, 978
SmiMI CAYNNNNRTG 1 cut(s) 1310
SmlI CTYRAG 2 cut(s) 191, 1298
SmoI CTYRAG 2 cut(s) 191, 1298
SphI GCATGC 1 cut(s) 875
Sse9I AATT 6 cut(s) 80, 222, 243, 750, 822, 948
SsiI CCGC 5 cut(s) 56, 174, 294, 863, 1264
SspMI CTAG 2 cut(s) 204, 350
StyD4I CCNGG 3 cut(s) 517, 760, 1433
StyI CCWWGG 2 cut(s) 203, 1016
TaaI ACNGT 9 cut(s) 8, 38, 52, 235, 448, 592, 650, 1060, 1312
TaiI ACGT 1 cut(s) 393
TaqI TCGA 3 cut(s) 128, 140, 744
TasI AATT 6 cut(s) 80, 222, 243, 750, 822, 948
TatI WGTACW 3 cut(s) 595, 640, 1302
TauI GCSGC 1 cut(s) 58
TfiI GAWTC 2 cut(s) 728, 793
Tru1I TTAA 8 cut(s) 24, 282, 375, 681, 972, 993, 1299, 1419
Tru9I TTAA 8 cut(s) 24, 282, 375, 681, 972, 993, 1299, 1419
TscAI CASTG 4 cut(s) 41, 1007, 1047, 1065
TseFI GTSAC 1 cut(s) 775
TseI GCWGC 9 cut(s) 58, 61, 64, 67, 70, 98, 275, 782, 893
Tsp45I GTSAC 1 cut(s) 775
TspDTI ATGAA 6 cut(s) 103, 158, 407, 473, 875, 1150
TspRI CASTG 4 cut(s) 41, 1007, 1047, 1065
Van91I CCANNNNNTGG 1 cut(s) 1253
Vha464I CTTAAG 1 cut(s) 1298
XapI RAATTY 1 cut(s) 750
XbaI TCTAGA 1 cut(s) 349
XceI RCATGY 2 cut(s) 832, 875
XmaJI CCTAGG 1 cut(s) 203
XspI CTAG 2 cut(s) 204, 350
ZrmI AGTACT 1 cut(s) 642
Zsp2I ATGCAT 1 cut(s) 415
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.